FFCP PHASE1:Hg19::chr11:62475140..62475195,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2785|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4405|TSSclassifier=W|UniProt=P63215|association_with_transcript=10bp_to_ENST00000294117_5end|coexpression_cluster_id=C3|description=CAGE_peak_1_at_GNG3_5end|id=chr11:62475140..62475195,+|ontology_enrichment_celltype=CL:0000047!9.73e-10!8;CL:0002319!1.79e-08!25;CL:0000540!1.50e-07!6;CL:0000031!1.50e-07!6;CL:0000404!1.50e-07!6;CL:0000133!3.82e-07!59|ontology_enrichment_celltype_v019=CL:0002319;2.07e-10;25!CL:0000540;2.68e-10;6!CL:0000404;2.68e-10;6!CL:0002322;7.49e-08;5|ontology_enrichment_celltype_v019_2=CL:0000047,1.78e-13,8;CL:0000133,5.94e-11,59;CL:0002319,2.06e-10,25;CL:0000540,2.70e-10,6;CL:0000031,2.70e-10,6;CL:0000404,2.70e-10,6;CL:0000221,7.15e-08,72;CL:0002322,7.85e-08,5|ontology_enrichment_development_v019=UBERON:0006601;1.08e-17;82!CL:0000031;2.68e-10;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.72e-64!82;UBERON:0005743!5.63e-62!86;UBERON:0001049!7.39e-62!57;UBERON:0005068!7.39e-62!57;UBERON:0006241!7.39e-62!57;UBERON:0007135!7.39e-62!57;UBERON:0000073!3.05e-61!94;UBERON:0001016!3.05e-61!94;UBERON:0003075!1.08e-53!86;UBERON:0007284!1.08e-53!86;UBERON:0002616!1.45e-53!59;UBERON:0002346!1.53e-51!90;UBERON:0000955!5.66e-50!69;UBERON:0006238!5.66e-50!69;UBERON:0002780!1.06e-47!41;UBERON:0001890!1.06e-47!41;UBERON:0006240!1.06e-47!41;UBERON:0007023!4.13e-47!115;UBERON:0003080!3.54e-46!42;UBERON:0001893!1.44e-40!34;UBERON:0002020!1.96e-40!34;UBERON:0003528!1.96e-40!34;UBERON:0002791!2.73e-39!33;UBERON:0003056!5.12e-39!61;UBERON:0001869!1.23e-38!32;UBERON:0004121!1.00e-35!169;UBERON:0000924!4.60e-35!173;UBERON:0006601!4.60e-35!173;UBERON:0000956!1.07e-30!25;UBERON:0000203!1.07e-30!25;UBERON:0000153!1.34e-29!129;UBERON:0007811!1.34e-29!129;UBERON:0000033!2.98e-28!123;UBERON:0002619!4.99e-28!22;UBERON:0001950!8.76e-26!20;UBERON:0003076!3.89e-16!15;UBERON:0003057!3.89e-16!15;UBERON:0004732!4.85e-14!13;UBERON:0000025!2.27e-13!194;UBERON:0004733!3.57e-13!12;UBERON:0002028!3.57e-13!12;UBERON:0007277!3.57e-13!12;UBERON:0000064!2.61e-12!219;UBERON:0002420!2.79e-11!9;UBERON:0007245!2.79e-11!9;UBERON:0010009!2.79e-11!9;UBERON:0010011!2.79e-11!9;UBERON:0000454!2.79e-11!9;UBERON:0002308!4.77e-11!9;UBERON:0000125!4.77e-11!9;UBERON:0001871!1.83e-10!7;UBERON:0004111!4.09e-10!241;UBERON:0000477!4.12e-10!286;UBERON:0002680!4.14e-10!9;UBERON:0001895!4.14e-10!9;UBERON:0010092!4.14e-10!9;UBERON:0009663!5.64e-09!7;UBERON:0000200!1.04e-08!6;UBERON:0001894!2.06e-08!7;UBERON:0006222!2.06e-08!7;UBERON:0000483!3.48e-08!309;UBERON:0000119!6.88e-08!312;UBERON:0000922!9.97e-08!612;UBERON:0002298!1.69e-07!8;UBERON:0001872!2.08e-07!5;UBERON:0002021!2.08e-07!5;UBERON:0000349!2.39e-07!5;UBERON:0000481!6.71e-07!347;UBERON:0002037!7.19e-07!6;UBERON:0006215!7.19e-07!6|ontology_enrichment_uberon_v019=UBERON:0001869;1.27e-50;32!UBERON:0001893;2.15e-50;34!UBERON:0002791;3.56e-50;32!UBERON:0003528;3.77e-50;34!UBERON:0002020;3.77e-50;34!UBERON:0002780;4.47e-49;41!UBERON:0001890;4.47e-49;41!UBERON:0000073;1.81e-47;53!UBERON:0002616;1.81e-47;53!UBERON:0000956;4.29e-44;25!UBERON:0000203;4.29e-44;25!UBERON:0002619;3.43e-40;22!UBERON:0001950;6.54e-37;20!UBERON:0000955;4.90e-32;68!UBERON:0001017;8.99e-31;75!UBERON:0001016;8.88e-29;83!UBERON:0004732;1.81e-17;13!UBERON:0004733;3.30e-16;12!UBERON:0002028;3.30e-16;12!UBERON:0002420;9.99e-16;9!UBERON:0007245;9.99e-16;9!UBERON:0010009;9.99e-16;9!UBERON:0010011;9.99e-16;9!UBERON:0000454;9.99e-16;9!UBERON:0000125;2.16e-15;9!UBERON:0002308;2.16e-15;9!UBERON:0007023;2.50e-14;114!UBERON:0001871;5.90e-13;6!UBERON:0009663;2.28e-12;7!UBERON:0011216;3.07e-12;132!UBERON:0000200;5.62e-12;6!UBERON:0002680;8.65e-12;9!UBERON:0001895;8.65e-12;9!UBERON:0001894;1.49e-11;7!UBERON:0002298;7.05e-11;6!UBERON:0001872;4.35e-10;5!UBERON:0002021;4.39e-10;5!UBERON:0000349;5.32e-10;5!UBERON:0000369;3.13e-08;4!UBERON:0002435;3.13e-08;4!UBERON:0000204;3.13e-08;4!UBERON:0010314;1.51e-07;132!UBERON:0002037;3.37e-07;6!UBERON:0002784;3.85e-07;4!UBERON:0000922;6.51e-07;49!UBERON:0003296;6.52e-07;4!UBERON:0010133;6.52e-07;4!UBERON:0001870;7.81e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.16e-90,81;UBERON:0001016,2.15e-90,89;UBERON:0001049,2.07e-89,56;UBERON:0005068,2.07e-89,56;UBERON:0006241,2.07e-89,56;UBERON:0007135,2.07e-89,56;UBERON:0000073,1.14e-84,53;UBERON:0002616,1.14e-84,53;UBERON:0003075,5.34e-71,82;UBERON:0007284,5.34e-71,82;UBERON:0000955,5.47e-70,68;UBERON:0006238,5.47e-70,68;UBERON:0002780,5.09e-69,41;UBERON:0001890,5.09e-69,41;UBERON:0003080,5.09e-69,41;UBERON:0006240,5.09e-69,41;UBERON:0002346,8.52e-67,86;UBERON:0001893,1.45e-58,34;UBERON:0003528,2.27e-58,34;UBERON:0002020,2.27e-58,34;UBERON:0001869,9.77e-56,32;UBERON:0010371,1.20e-55,104;UBERON:0002791,3.32e-55,32;UBERON:0003056,4.39e-53,61;UBERON:0007023,4.00e-49,114;UBERON:0004121,4.52e-49,171;UBERON:0000924,4.52e-49,171;UBERON:0006601,4.52e-49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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2785 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4405 | |||
|TSSclassifier=W | |||
|UniProt=P63215 | |||
|association_with_transcript=10bp_to_ENST00000294117_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_GNG3_5end | |||
|id=chr11:62475140..62475195,+ | |||
|ontology_enrichment_celltype=CL:0000047!9.73e-10!8;CL:0002319!1.79e-08!25;CL:0000540!1.50e-07!6;CL:0000031!1.50e-07!6;CL:0000404!1.50e-07!6;CL:0000133!3.82e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002319;2.07e-10;25!CL:0000540;2.68e-10;6!CL:0000404;2.68e-10;6!CL:0002322;7.49e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.78e-13,8;CL:0000133,5.94e-11,59;CL:0002319,2.06e-10,25;CL:0000540,2.70e-10,6;CL:0000031,2.70e-10,6;CL:0000404,2.70e-10,6;CL:0000221,7.15e-08,72;CL:0002322,7.85e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.08e-17;82!CL:0000031;2.68e-10;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p1@GNG3 | |||
}} |
Revision as of 18:34, 10 September 2013
Short description: | p1@GNG3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_GNG3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 10bp_to_ENST00000294117_5end |
EntrezGene: | GNG3 |
HGNC: | 4405 |
UniProt: | P63215 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.78e-13 | 8 |
neurectodermal cell | 5.94e-11 | 59 |
neural cell | 2.06e-10 | 25 |
neuron | 2.70e-10 | 6 |
neuroblast | 2.70e-10 | 6 |
electrically signaling cell | 2.70e-10 | 6 |
ectodermal cell | 7.15e-08 | 72 |
embryonic stem cell | 7.85e-08 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.