FFCP PHASE1:Hg19::chr1:20141681..20141690,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=54546|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25978|TSSclassifier=S|UniProt=Q9NXI6|association_with_transcript=80bp_to_ENST00000375121,NM_019062,uc001bcr.2_5end|coexpression_cluster_id=C190|description=CAGE_peak_5_at_RNF186_5end|id=chr1:20141681..20141690,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002535;4.30e-11;2|ontology_enrichment_celltype_v019_2=CL:0002535,4.52e-11,2|ontology_enrichment_development_v019=UBERON:0007297;2.35e-11;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.85e-26!27;UBERON:0005409!2.86e-24!35;UBERON:0001155!1.29e-21!9;UBERON:0000059!1.14e-17!11;UBERON:0002108!6.09e-13!14;UBERON:0006947!1.57e-11!3;UBERON:0004054!1.57e-11!3;UBERON:0002294!2.83e-10!7;UBERON:0001173!2.83e-10!7;UBERON:0004912!2.83e-10!7;UBERON:0001301!1.89e-09!1;UBERON:0001000!4.19e-09!1;UBERON:0005352!4.19e-09!1;UBERON:0004921!4.49e-09!129;UBERON:0004185!4.49e-09!129;UBERON:0001154!4.54e-09!1;UBERON:0001153!4.54e-09!1;UBERON:0005904!7.29e-09!4;UBERON:0002394!1.98e-08!4;UBERON:0003928!1.98e-08!4;UBERON:0001007!2.34e-08!155;UBERON:0001555!2.34e-08!155;UBERON:0007026!2.34e-08!155;UBERON:0004119!1.92e-07!169;UBERON:0000925!1.92e-07!169;UBERON:0006595!1.92e-07!169;UBERON:0004907!5.31e-07!5;UBERON:0003135!6.00e-07!11;UBERON:0001045!8.65e-07!11|ontology_enrichment_uberon_v019=UBERON:0002108;2.88e-36;4!UBERON:0000160;9.53e-28;17!UBERON:0005409;8.89e-22;22!UBERON:0001301;2.55e-21;1!UBERON:0004921;2.57e-13;33!UBERON:0006955;4.30e-11;2!UBERON:0004801;4.30e-11;2!UBERON:0001155;6.93e-10;9!UBERON:0000059;2.97e-08;11!UBERON:0006947;5.36e-08;3!UBERON:0004054;5.36e-08;3!UBERON:0002114;6.13e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0002108,2.88e-36,4;UBERON:0000160,9.27e-28,17;UBERON:0001301,2.30e-21,1;UBERON:0005409,2.66e-19,25;UBERON:0006955,4.52e-11,2;UBERON:0004801,4.52e-11,2;UBERON:0001155,6.78e-10,9;UBERON:0000059,2.92e-08,11;UBERON:0006947,5.18e-08,3;UBERON:0004054,5.18e-08,3;UBERON:0002114,6.34e-08,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,1.0077309914171,0,0.123084805461069,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0.995261931078505,3.80367527364358,10.9985426088053,0,0,0,0,0,0,0,0,0,0.394584402849391,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,5.94070672022902,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.12237097444788,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56302802246618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.09675849052763,2.84127428655144,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.7031878836078,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0|short_description=p5@RNF186}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=54546 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25978 | |||
|TSSclassifier=S | |||
|UniProt=Q9NXI6 | |||
|association_with_transcript=80bp_to_ENST00000375121,NM_019062,uc001bcr.2_5end | |||
|coexpression_cluster_id=C190 | |||
|description=CAGE_peak_5_at_RNF186_5end | |||
|id=chr1:20141681..20141690,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002535;4.30e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,4.52e-11,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.35e-11;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.85e-26!27;UBERON:0005409!2.86e-24!35;UBERON:0001155!1.29e-21!9;UBERON:0000059!1.14e-17!11;UBERON:0002108!6.09e-13!14;UBERON:0006947!1.57e-11!3;UBERON:0004054!1.57e-11!3;UBERON:0002294!2.83e-10!7;UBERON:0001173!2.83e-10!7;UBERON:0004912!2.83e-10!7;UBERON:0001301!1.89e-09!1;UBERON:0001000!4.19e-09!1;UBERON:0005352!4.19e-09!1;UBERON:0004921!4.49e-09!129;UBERON:0004185!4.49e-09!129;UBERON:0001154!4.54e-09!1;UBERON:0001153!4.54e-09!1;UBERON:0005904!7.29e-09!4;UBERON:0002394!1.98e-08!4;UBERON:0003928!1.98e-08!4;UBERON:0001007!2.34e-08!155;UBERON:0001555!2.34e-08!155;UBERON:0007026!2.34e-08!155;UBERON:0004119!1.92e-07!169;UBERON:0000925!1.92e-07!169;UBERON:0006595!1.92e-07!169;UBERON:0004907!5.31e-07!5;UBERON:0003135!6.00e-07!11;UBERON:0001045!8.65e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;2.88e-36;4!UBERON:0000160;9.53e-28;17!UBERON:0005409;8.89e-22;22!UBERON:0001301;2.55e-21;1!UBERON:0004921;2.57e-13;33!UBERON:0006955;4.30e-11;2!UBERON:0004801;4.30e-11;2!UBERON:0001155;6.93e-10;9!UBERON:0000059;2.97e-08;11!UBERON:0006947;5.36e-08;3!UBERON:0004054;5.36e-08;3!UBERON:0002114;6.13e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,2.88e-36,4;UBERON:0000160,9.27e-28,17;UBERON:0001301,2.30e-21,1;UBERON:0005409,2.66e-19,25;UBERON:0006955,4.52e-11,2;UBERON:0004801,4.52e-11,2;UBERON:0001155,6.78e-10,9;UBERON:0000059,2.92e-08,11;UBERON:0006947,5.18e-08,3;UBERON:0004054,5.18e-08,3;UBERON:0002114,6.34e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,1.0077309914171,0,0.123084805461069,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0.995261931078505,3.80367527364358,10.9985426088053,0,0,0,0,0,0,0,0,0,0.394584402849391,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,5.94070672022902,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.12237097444788,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56302802246618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.09675849052763,2.84127428655144,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.7031878836078,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p5@RNF186 | |||
}} |
Revision as of 02:45, 12 September 2013
Short description: | p5@RNF186 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_RNF186_5end |
Coexpression cluster: | C190_colon_small_rectum_duodenum_appendix_temporal_oral |
Association with transcript: | 80bp_to_ENST00000375121, NM_019062, uc001bcr.2_5end |
EntrezGene: | RNF186 |
HGNC: | 25978 |
UniProt: | Q9NXI6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 4.52e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
small intestine | 2.88e-36 | 4 |
intestine | 9.27e-28 | 17 |
epididymis | 2.30e-21 | 1 |
gastrointestinal system | 2.66e-19 | 25 |
uterine epithelium | 4.52e-11 | 2 |
cervix epithelium | 4.52e-11 | 2 |
colon | 6.78e-10 | 9 |
large intestine | 2.92e-08 | 11 |
male genital duct | 5.18e-08 | 3 |
internal male genitalia | 5.18e-08 | 3 |
duodenum | 6.34e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.