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FFCP PHASE1:Mm9::chr13:49404586..49404626,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=30938|HGNC=|MCL_coexpression_id=36|UniProt=Q3TNB8|association_with_transcript=0bp_to_ENSMUST00000110087_5end|description=CAGE_peak_2_at_Fgd3_5end|id=chr13:49404586..49404626,-|ontology_enrichment_celltype=CL:0002031!6.47e-10!25;CL:0000988!5.81e-09!32;CL:0002032!5.81e-09!32;CL:0000037!5.81e-09!32;CL:0000566!5.81e-09!32;CL:0000837!5.81e-09!32;CL:0000738!1.17e-08!17;CL:0002087!1.17e-08!17;CL:0000838!3.99e-08!12;CL:0000084!2.05e-07!11;CL:0000827!2.05e-07!11;CL:0000542!5.57e-07!13;CL:0000051!5.57e-07!13|ontology_enrichment_celltype_v019_2=CL:0002031,3.74e-16,25;CL:0000988,5.20e-16,32;CL:0002032,5.20e-16,32;CL:0000037,5.20e-16,32;CL:0000837,5.20e-16,32;CL:0000738,8.20e-13,17;CL:0002087,8.20e-13,17;CL:0000838,1.40e-12,12;CL:0002320,4.72e-12,46;CL:0000134,4.72e-12,46;CL:0000084,2.16e-11,11;CL:0000827,2.16e-11,11;CL:0000542,2.53e-11,13;CL:0000051,2.53e-11,13;CL:0000791,5.59e-10,9;CL:0000789,5.59e-10,9;CL:0002420,5.59e-10,9;CL:0002419,5.59e-10,9;CL:0000790,5.59e-10,9;CL:0000219,5.06e-09,54;CL:0000624,8.73e-09,8;CL:0000553,9.13e-07,6;CL:0000556,9.13e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!3.26e-18!48;UBERON:0002390!3.52e-17!45;UBERON:0003061!3.52e-17!45;UBERON:0002405!4.11e-13!70;UBERON:0004177!7.92e-12!29;UBERON:0003081!4.45e-10!88;UBERON:0003408!4.06e-09!24;UBERON:0002370!1.06e-08!23;UBERON:0000974!1.06e-08!23;UBERON:0004807!1.06e-08!23;UBERON:0005058!1.06e-08!23;UBERON:0003351!1.06e-08!23;UBERON:0009113!1.06e-08!23;UBERON:0003295!1.06e-08!23;UBERON:0009722!1.06e-08!23;UBERON:0005562!1.06e-08!23;UBERON:0007690!1.06e-08!23;UBERON:0006562!1.60e-08!24;UBERON:0001557!1.60e-08!24;UBERON:0001042!1.60e-08!24;UBERON:0008814!1.60e-08!24;UBERON:0009145!1.60e-08!24;UBERON:0005057!3.04e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.36e-30,48;UBERON:0002405,2.36e-30,48;UBERON:0002390,1.19e-29,45;UBERON:0003061,1.19e-29,45;UBERON:0004177,1.18e-20,29;UBERON:0005057,1.18e-20,29;UBERON:0000077,7.57e-17,35;UBERON:0003408,5.31e-16,24;UBERON:0002370,2.73e-15,23;UBERON:0000974,2.73e-15,23;UBERON:0004807,2.73e-15,23;UBERON:0005058,2.73e-15,23;UBERON:0003351,2.73e-15,23;UBERON:0009113,2.73e-15,23;UBERON:0003295,2.73e-15,23;UBERON:0009722,2.73e-15,23;UBERON:0005562,2.73e-15,23;UBERON:0007690,2.73e-15,23;UBERON:0006562,2.22e-14,24;UBERON:0001557,2.22e-14,24;UBERON:0001042,2.22e-14,24;UBERON:0008814,2.22e-14,24;UBERON:0009145,2.22e-14,24;UBERON:0003081,3.05e-13,87;UBERON:0000072,4.51e-12,27;UBERON:0002384,4.72e-12,46;UBERON:0001004,6.99e-11,42;UBERON:0001474,2.35e-10,22;UBERON:0004765,2.35e-10,22;UBERON:0001434,2.35e-10,22;UBERON:0000065,2.75e-10,41;UBERON:0002371,1.97e-09,16;UBERON:0002204,4.24e-09,32;UBERON:0001041,4.32e-09,80;UBERON:0000926,7.97e-09,120;UBERON:0004120,7.97e-09,120;UBERON:0006603,7.97e-09,120;UBERON:0007811,1.69e-08,36|phase1_expression=0,0,0,0,0,0,0,19.2393751927949,6.75785866328,2.80877431586392,2.39705155515707,1.43589886191606,16.7776715332582,18.9702273249224,3.66420737997229,2.42970320867791,1.39912375625629,18.2968055907778,18.373334103169,18.2487550273153,0.850432901510698,4.56738375524072,1.82839852397255,1.11994695955385,0.45881856213434,0,0,0,0,0,0.665191531965914,0,0,0,0,0,0,21.7636447983192,10.9386948233332,16.7527598071615,32.9409633297368,23.9065919735456,25.24653835762,0,0,0,0,0,0,0,0,0,19.2949996966397,17.4086914082723,20.8378155468328,0,0.286533439938757,0,0,0,0,0,0,4.94944844504769,5.93319817540185,7.8152812644071,2.09720077362883,0.768436610643109,0,0,0,0.285650984403804,0,0,0,0,0,0,0.153606533256243,0,0,0,0.837548997004143,0,0.15279824777681,0.294628585473668,0,0,0.302904773332736,0,0,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,1.37020655662872,12.1700805314171,0.742210695324124,0.173485326766136,0,0,0.301445281105245,0.117588707135705,0.251333182659351,0,0.722996784599558,3.5384422077995,1.13236794963186,3.5334642953663,1.45462575940567,0,0.292780797011547,0.41889341362691,1.02182822083437,3.95389910869537,1.19980546198682,1.39777249780371,0.149790639404823,0.457500602818626,0,0.173824320192276,0.511430914660661,0.41557608911912,0.324482526135515,0.203678727700633,4.22983700074316,0.505445516867349,0,0,0.229902104433473,0,0.30140963567143,0.136072998302656,0,0,0,0,0.189106080167819,0,0,0,0.348252166522167,0.205782136407943,0,0,0,1.42081749697796,0,0.234526059981096,0,0,0,0.308534225774757,0.232533944750408,0,0.233530684734339,0.329119699826961,0.492502392237286,0.0810688095458557,0.584799949701329,0.658650345873152,0.268412837520744,0,0,1.32167513193519,0.264450566663544,0,0,0,0.201683524623343,0.22237804384487,0,0.949058123089023,0,0.502670417600539,0.198956472041151,0.19496408711912,1.79763881730844,0.432276099749388,1.39398891278057,0,0.228497025219458,0,0,0,0.0701358198903186,0.189709611372772,0,0.31399745568275,0.616985819609003,0.296452627087149,0.166845105716094,0.589676985339609,0.674586337154561,0,0,0.763877555344259,1.43848068725405,1.13494658742525,0,1.43768206527355,2.60498663367952,1.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|EntrezGene=30938
|HGNC=
|MCL_coexpression_id=36
|UniProt=Q3TNB8
|association_with_transcript=0bp_to_ENSMUST00000110087_5end
|description=CAGE_peak_2_at_Fgd3_5end
|id=chr13:49404586..49404626,-
|ontology_enrichment_celltype=CL:0002031!6.47e-10!25;CL:0000988!5.81e-09!32;CL:0002032!5.81e-09!32;CL:0000037!5.81e-09!32;CL:0000566!5.81e-09!32;CL:0000837!5.81e-09!32;CL:0000738!1.17e-08!17;CL:0002087!1.17e-08!17;CL:0000838!3.99e-08!12;CL:0000084!2.05e-07!11;CL:0000827!2.05e-07!11;CL:0000542!5.57e-07!13;CL:0000051!5.57e-07!13
|ontology_enrichment_celltype_v019_2=CL:0002031,3.74e-16,25;CL:0000988,5.20e-16,32;CL:0002032,5.20e-16,32;CL:0000037,5.20e-16,32;CL:0000837,5.20e-16,32;CL:0000738,8.20e-13,17;CL:0002087,8.20e-13,17;CL:0000838,1.40e-12,12;CL:0002320,4.72e-12,46;CL:0000134,4.72e-12,46;CL:0000084,2.16e-11,11;CL:0000827,2.16e-11,11;CL:0000542,2.53e-11,13;CL:0000051,2.53e-11,13;CL:0000791,5.59e-10,9;CL:0000789,5.59e-10,9;CL:0002420,5.59e-10,9;CL:0002419,5.59e-10,9;CL:0000790,5.59e-10,9;CL:0000219,5.06e-09,54;CL:0000624,8.73e-09,8;CL:0000553,9.13e-07,6;CL:0000556,9.13e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002193!3.26e-18!48;UBERON:0002390!3.52e-17!45;UBERON:0003061!3.52e-17!45;UBERON:0002405!4.11e-13!70;UBERON:0004177!7.92e-12!29;UBERON:0003081!4.45e-10!88;UBERON:0003408!4.06e-09!24;UBERON:0002370!1.06e-08!23;UBERON:0000974!1.06e-08!23;UBERON:0004807!1.06e-08!23;UBERON:0005058!1.06e-08!23;UBERON:0003351!1.06e-08!23;UBERON:0009113!1.06e-08!23;UBERON:0003295!1.06e-08!23;UBERON:0009722!1.06e-08!23;UBERON:0005562!1.06e-08!23;UBERON:0007690!1.06e-08!23;UBERON:0006562!1.60e-08!24;UBERON:0001557!1.60e-08!24;UBERON:0001042!1.60e-08!24;UBERON:0008814!1.60e-08!24;UBERON:0009145!1.60e-08!24;UBERON:0005057!3.04e-07!51
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.36e-30,48;UBERON:0002405,2.36e-30,48;UBERON:0002390,1.19e-29,45;UBERON:0003061,1.19e-29,45;UBERON:0004177,1.18e-20,29;UBERON:0005057,1.18e-20,29;UBERON:0000077,7.57e-17,35;UBERON:0003408,5.31e-16,24;UBERON:0002370,2.73e-15,23;UBERON:0000974,2.73e-15,23;UBERON:0004807,2.73e-15,23;UBERON:0005058,2.73e-15,23;UBERON:0003351,2.73e-15,23;UBERON:0009113,2.73e-15,23;UBERON:0003295,2.73e-15,23;UBERON:0009722,2.73e-15,23;UBERON:0005562,2.73e-15,23;UBERON:0007690,2.73e-15,23;UBERON:0006562,2.22e-14,24;UBERON:0001557,2.22e-14,24;UBERON:0001042,2.22e-14,24;UBERON:0008814,2.22e-14,24;UBERON:0009145,2.22e-14,24;UBERON:0003081,3.05e-13,87;UBERON:0000072,4.51e-12,27;UBERON:0002384,4.72e-12,46;UBERON:0001004,6.99e-11,42;UBERON:0001474,2.35e-10,22;UBERON:0004765,2.35e-10,22;UBERON:0001434,2.35e-10,22;UBERON:0000065,2.75e-10,41;UBERON:0002371,1.97e-09,16;UBERON:0002204,4.24e-09,32;UBERON:0001041,4.32e-09,80;UBERON:0000926,7.97e-09,120;UBERON:0004120,7.97e-09,120;UBERON:0006603,7.97e-09,120;UBERON:0007811,1.69e-08,36
|phase1_expression=0,0,0,0,0,0,0,19.2393751927949,6.75785866328,2.80877431586392,2.39705155515707,1.43589886191606,16.7776715332582,18.9702273249224,3.66420737997229,2.42970320867791,1.39912375625629,18.2968055907778,18.373334103169,18.2487550273153,0.850432901510698,4.56738375524072,1.82839852397255,1.11994695955385,0.45881856213434,0,0,0,0,0,0.665191531965914,0,0,0,0,0,0,21.7636447983192,10.9386948233332,16.7527598071615,32.9409633297368,23.9065919735456,25.24653835762,0,0,0,0,0,0,0,0,0,19.2949996966397,17.4086914082723,20.8378155468328,0,0.286533439938757,0,0,0,0,0,0,4.94944844504769,5.93319817540185,7.8152812644071,2.09720077362883,0.768436610643109,0,0,0,0.285650984403804,0,0,0,0,0,0,0.153606533256243,0,0,0,0.837548997004143,0,0.15279824777681,0.294628585473668,0,0,0.302904773332736,0,0,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,1.37020655662872,12.1700805314171,0.742210695324124,0.173485326766136,0,0,0.301445281105245,0.117588707135705,0.251333182659351,0,0.722996784599558,3.5384422077995,1.13236794963186,3.5334642953663,1.45462575940567,0,0.292780797011547,0.41889341362691,1.02182822083437,3.95389910869537,1.19980546198682,1.39777249780371,0.149790639404823,0.457500602818626,0,0.173824320192276,0.511430914660661,0.41557608911912,0.324482526135515,0.203678727700633,4.22983700074316,0.505445516867349,0,0,0.229902104433473,0,0.30140963567143,0.136072998302656,0,0,0,0,0.189106080167819,0,0,0,0.348252166522167,0.205782136407943,0,0,0,1.42081749697796,0,0.234526059981096,0,0,0,0.308534225774757,0.232533944750408,0,0.233530684734339,0.329119699826961,0.492502392237286,0.0810688095458557,0.584799949701329,0.658650345873152,0.268412837520744,0,0,1.32167513193519,0.264450566663544,0,0,0,0.201683524623343,0.22237804384487,0,0.949058123089023,0,0.502670417600539,0.198956472041151,0.19496408711912,1.79763881730844,0.432276099749388,1.39398891278057,0,0.228497025219458,0,0,0,0.0701358198903186,0.189709611372772,0,0.31399745568275,0.616985819609003,0.296452627087149,0.166845105716094,0.589676985339609,0.674586337154561,0,0,0.763877555344259,1.43848068725405,1.13494658742525,0,1.43768206527355,2.60498663367952,1.5601883655728,1.76805214562978,0,0,2.95605104266567,0,0,0,0.234690248288502,0.167506257441816,0,0.585400943573396,0.315270288212382,0,1.59454768657487,2.45794972073607,2.59027472798843,1.59113964439663,10.5553898757491,6.52686820582452,0.983528546038072,0.275936746304732,0,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0,0.162886959353576,0.989820737835213,1.32745138339963,0.242780636154981,0,0,0,1.22974059177571,0.258428293168221,0,1.06949213515416,0.948110273807448,2.10837217149998,3.09406629744561,0,0,0,0.214337035031592,0.177340233642274,0.178368817602071,0,0,0.23467170806371,0.21183207086382,0.220528398054962,0.98931751764888,0.484393280087717,0.361877549568935,0.119372344003136,0.164140899745061,1.1659233465194,0.18542530201051,7.51831875510552,2.68302928352189,3.88908507476395,4.52084296811258,6.97140561377228,8.00723606222829,10.538662659619,8.81694149639045,7.87739850685216,0,0,0.203319467126849,0.108005340821801,0,0,0.404593039154462,0.330613822901344,0.26175594198403,0.259229946583586,2.4853572523477,0,0.149516546043979,0,0.194451188344048,0.129159823477731,0,0,0.13020438484395,0,0,0.288030006257865,4.74016680942267,1.82452693761148,1.54066435747241,2.46849563657811,4.47566739168704,5.96044064343795,5.88957702647847,5.31682297828478,6.05798699688886,6.02033772574499,7.36031151498936,8.08900410139945,11.9302683634009,10.7526750007043,0.226730383615211,0,0,0,1.35232715822533,0.750729901804728,0.73260649706906,0.214368379079066,0,0.564751842617067,0,0,0.171853182343688,0.685082519770642,0,0,0.45032120322422,0,0,0,0.399024873401031,0.170733605754134,0.243106717068294,0,0,0,0.206035057238894,0,0,0,0.188626341386076,0.187283014939765,0.128050304809739,0.229741875822453,0,0.115884325944855,0.77163688185482,0.412085900803307,0.147198920134397,1.02860775715625,0.177475806159338,0.476872379894642,0.290692833264657,0.188218760830661,0.169229215783353,0.182927972872773,0,0.135804113845862,0.561142271657738,0.237270036248348,0.0985044823755635,0.818462086339379,0.464810523557898,0.385813221962283,0,0.467863216890817,0,0.956441660344217,0.441182838239031,1.15933917810211
|short_description=p2@Fgd3
}}

Revision as of 00:42, 13 September 2013

Short description:p2@Fgd3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Fgd3_5end
Coexpression cluster:MCL_coexpression_mm9:36
Association with transcript: 0bp_to_ENSMUST00000110087_5end
EntrezGene:Fgd3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Fgd3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E919.24
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E76.76
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.81
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.44
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E416.78
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E818.97
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.43
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A218.30
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A418.37
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A618.25
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H24.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.83
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G821.76
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H110.94
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H316.75
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G932.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H223.91
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H425.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A219.29
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I917.41
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A120.84
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.95
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E75.93
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.82
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.37
accessory axillary lymph node, adult.CNhs10475.1063-29H912.17
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A63.53
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.95
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.40
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.23
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F41.13
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A31.77
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B12.96
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E61.59
lung, neonate N20.CNhs11109.822-18A42.46
lung, neonate N25.CNhs11119.1359-25C72.59
lung, neonate N30.CNhs11133.1394-42H21.59
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A110.56
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A16.53
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G27.52
spleen, embryo E16.CNhs11035.461-43C12.68
spleen, embryo E18.CNhs11011.1271-21F23.89
spleen, neonate N10.CNhs11116.752-24D14.52
spleen, neonate N20.CNhs11112.824-19H16.97
spleen, neonate N25.CNhs11099.1354-25G38.01
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C610.54
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C98.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D37.88
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B54.74
thymus, embryo E14.CNhs11041.402-44I41.82
thymus, embryo E15.CNhs11005.430-45I21.54
thymus, embryo E16.CNhs11002.456-26C52.47
thymus, embryo E17.CNhs10581.478-18C14.48
thymus, embryo E18.CNhs10595.1273-19G45.96
thymus, neonate N02.CNhs11181.1541-43F85.89
thymus, neonate N03.CNhs11137.2104-43C75.32
thymus, neonate N06.CNhs11197.681-26C46.06
thymus, neonate N07.CNhs11211.713-19D36.02
thymus, neonate N10.CNhs11194.748-24E47.36
thymus, neonate N20.CNhs11186.820-7A28.09
thymus, neonate N25.CNhs11125.1362-25G711.93
thymus, neonate N30.CNhs11132.1393-42G210.75
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hemolymphoid system2.36e-3048
immune system2.36e-3048
hematopoietic system1.19e-2945
blood island1.19e-2945
hemopoietic organ1.18e-2029
immune organ1.18e-2029
mixed endoderm/mesoderm-derived structure7.57e-1735
gland of gut5.31e-1624
thymus2.73e-1523
neck2.73e-1523
respiratory system epithelium2.73e-1523
hemolymphoid system gland2.73e-1523
pharyngeal epithelium2.73e-1523
thymic region2.73e-1523
pharyngeal gland2.73e-1523
entire pharyngeal arch endoderm2.73e-1523
thymus primordium2.73e-1523
early pharyngeal endoderm2.73e-1523
pharynx2.22e-1424
upper respiratory tract2.22e-1424
chordate pharynx2.22e-1424
pharyngeal arch system2.22e-1424
pharyngeal region of foregut2.22e-1424
lateral plate mesoderm3.05e-1387
segment of respiratory tract4.51e-1227
connective tissue4.72e-1246
respiratory system6.99e-1142
bone element2.35e-1022
skeletal element2.35e-1022
skeletal system2.35e-1022
respiratory tract2.75e-1041
bone marrow1.97e-0916
musculoskeletal system4.24e-0932
foregut4.32e-0980
mesoderm7.97e-09120
mesoderm-derived structure7.97e-09120
presumptive mesoderm7.97e-09120
craniocervical region1.69e-0836







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