FFCP PHASE1:Mm9::chr9:95855239..95855262,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=24127|HGNC=|MCL_coexpression_id=452|UniProt=F8VQ87,P97789|association_with_transcript=60bp_to_ENSMUST00000034981,NM_011916,uc009rbv.1,uc009rbw.1,uc009rbx.1,uc009rby.1_5end|description=CAGE_peak_2_at_Xrn1_5end|id=chr9:95855239..95855262,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!1.66e-11!130;UBERON:0000925!1.66e-11!130;UBERON:0006595!1.66e-11!130;UBERON:0001007!1.97e-11!128;UBERON:0001555!1.97e-11!128;UBERON:0007026!1.97e-11!128;UBERON:0004921!9.22e-11!126;UBERON:0004185!9.22e-11!126;UBERON:0002193!1.08e-09!48;UBERON:0002390!1.83e-08!45;UBERON:0003061!1.83e-08!45;UBERON:0004177!2.83e-08!29;UBERON:0000490!5.01e-08!66;UBERON:0002405!1.43e-07!70;UBERON:0003081!2.22e-07!88;UBERON:0002370!3.38e-07!23;UBERON:0000974!3.38e-07!23;UBERON:0004807!3.38e-07!23;UBERON:0005058!3.38e-07!23;UBERON:0003351!3.38e-07!23;UBERON:0009113!3.38e-07!23;UBERON:0003295!3.38e-07!23;UBERON:0009722!3.38e-07!23;UBERON:0005562!3.38e-07!23;UBERON:0007690!3.38e-07!23;UBERON:0004923!3.73e-07!24;UBERON:0005911!4.26e-07!69;UBERON:0005409!4.62e-07!59;UBERON:0003408!4.84e-07!24;UBERON:0006562!9.18e-07!24;UBERON:0001557!9.18e-07!24;UBERON:0001042!9.18e-07!24;UBERON:0008814!9.18e-07!24;UBERON:0009145!9.18e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.23e-12,118;UBERON:0000925,1.23e-12,118;UBERON:0006595,1.23e-12,118;UBERON:0001007,1.41e-12,116;UBERON:0001555,1.41e-12,116;UBERON:0007026,1.41e-12,116;UBERON:0004921,7.12e-12,114;UBERON:0002193,9.18e-10,48;UBERON:0002405,9.18e-10,48;UBERON:0000160,3.63e-09,31;UBERON:0005409,7.78e-09,47;UBERON:0002390,1.57e-08,45;UBERON:0003061,1.57e-08,45;UBERON:0004177,2.11e-08,29;UBERON:0005057,2.11e-08,29;UBERON:0000490,4.07e-08,66;UBERON:0000077,1.56e-07,35;UBERON:0002370,2.51e-07,23;UBERON:0000974,2.51e-07,23;UBERON:0004807,2.51e-07,23;UBERON:0005058,2.51e-07,23;UBERON:0003351,2.51e-07,23;UBERON:0009113,2.51e-07,23;UBERON:0003295,2.51e-07,23;UBERON:0009722,2.51e-07,23;UBERON:0005562,2.51e-07,23;UBERON:0007690,2.51e-07,23;UBERON:0005911,3.53e-07,69;UBERON:0003408,3.62e-07,24;UBERON:0004923,3.69e-07,24;UBERON:0003081,5.32e-07,87;UBERON:0006562,6.91e-07,24;UBERON:0001557,6.91e-07,24;UBERON:0001042,6.91e-07,24;UBERON:0008814,6.91e-07,24;UBERON:0009145,6.91e-07,24|phase1_expression=4.00372117761985,11.5161884520989,9.09998478779072,18.7527811010235,17.5313505481222,6.37941233265181,4.20502753071946,17.5607719880544,4.78681655315667,10.5329036844897,2.91070545983358,5.10541817570153,13.5248576645653,19.4073293370174,4.33042690360362,6.47920855647443,3.49780939064073,17.0349569293448,18.921791837592,10.6097412949508,5.69790044012167,5.36171136484781,4.70159620450084,10.7194923271582,6.8822784320151,5.7423196411502,8.18447792702242,10.5580904016086,16.9120843316173,23.4388020676736,8.86922042621219,0.635030673459631,4.92051830067656,0,5.48818077527422,4.3221007793208,4.08338712524738,5.85944283031671,7.813353445238,17.7998072951091,7.05877785637217,6.14740936462601,9.71020706062307,8.05739635043695,7.80602370390262,5.32285581268876,2.34717403304412,1.09012578190223,0.219686182734472,0.777719596297134,0.839918529752175,0,13.2548258785612,14.5072428402269,14.452033363126,3.08711323243136,4.58453503902011,5.15672092277442,0.404632921719196,0,0,0.338844532069132,0,2.6996991518442,2.96659908770092,0.7104801149461,0.299600110518405,0.768436610643109,0.829516898467821,0.405017814995072,0.420649922702764,1.14260393761521,0.662605622854841,0.244981598429908,0.575072826109418,0,2.20231761998777,2.42605942361857,2.15049146558741,0.659431438650969,0.914876436024097,1.56274011167028,0.558365998002762,3.37657566019008,1.83357897332172,2.35702868378934,1.42371680799103,1.1183966749518,4.69502398665741,6.57472572929034,6.95674772884027,6.0229671388697,1.3599426674155,1.61910957491345,5.19821133958135,4.92829575807069,5.75822122540183,2.55645483867087,1.29893002301434,0.70667914902068,4.92951969218382,10.2661181931454,0,0,1.29894624606728,0.760079596425296,1.51657333504435,7.4219521817389,22.2686579936568,4.00793775475027,2.77576522825817,3.34912026143355,2.30615497256059,3.46662073271032,6.11461277105665,2.63899841792318,6.92145909656247,6.65157041831594,7.96149496754887,3.07357014900077,4.41683036920787,3.87900202508178,3.72783522436244,2.92780797011547,2.72280718857492,12.517395705221,15.3363359367578,4.79922184794726,10.5468288470644,1.64769703345305,0.457500602818626,0.753926112677186,2.08589184230732,4.85859368927628,1.87009240103604,3.0825839982874,7.23059483337246,5.47390670684409,4.29628689337247,2.10441855886474,1.95180664444056,1.14951052216736,1.62055916824814,3.31550599238573,4.42237244483631,3.45907044769094,2.71735001223214,1.03481348295606,0.646703978798527,4.16033376369202,2.46331573829528,2.41115305670332,4.17070873838397,3.83077383174383,6.1734640922383,3.58261680273288,4.91549231119264,7.20574139921202,6.81992398549422,1.24275463521301,2.11073453982987,1.9806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| ||
|EntrezGene=24127 | |||
|HGNC= | |||
|MCL_coexpression_id=452 | |||
|UniProt=F8VQ87,P97789 | |||
|association_with_transcript=60bp_to_ENSMUST00000034981,NM_011916,uc009rbv.1,uc009rbw.1,uc009rbx.1,uc009rby.1_5end | |||
|description=CAGE_peak_2_at_Xrn1_5end | |||
|id=chr9:95855239..95855262,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.66e-11!130;UBERON:0000925!1.66e-11!130;UBERON:0006595!1.66e-11!130;UBERON:0001007!1.97e-11!128;UBERON:0001555!1.97e-11!128;UBERON:0007026!1.97e-11!128;UBERON:0004921!9.22e-11!126;UBERON:0004185!9.22e-11!126;UBERON:0002193!1.08e-09!48;UBERON:0002390!1.83e-08!45;UBERON:0003061!1.83e-08!45;UBERON:0004177!2.83e-08!29;UBERON:0000490!5.01e-08!66;UBERON:0002405!1.43e-07!70;UBERON:0003081!2.22e-07!88;UBERON:0002370!3.38e-07!23;UBERON:0000974!3.38e-07!23;UBERON:0004807!3.38e-07!23;UBERON:0005058!3.38e-07!23;UBERON:0003351!3.38e-07!23;UBERON:0009113!3.38e-07!23;UBERON:0003295!3.38e-07!23;UBERON:0009722!3.38e-07!23;UBERON:0005562!3.38e-07!23;UBERON:0007690!3.38e-07!23;UBERON:0004923!3.73e-07!24;UBERON:0005911!4.26e-07!69;UBERON:0005409!4.62e-07!59;UBERON:0003408!4.84e-07!24;UBERON:0006562!9.18e-07!24;UBERON:0001557!9.18e-07!24;UBERON:0001042!9.18e-07!24;UBERON:0008814!9.18e-07!24;UBERON:0009145!9.18e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.23e-12,118;UBERON:0000925,1.23e-12,118;UBERON:0006595,1.23e-12,118;UBERON:0001007,1.41e-12,116;UBERON:0001555,1.41e-12,116;UBERON:0007026,1.41e-12,116;UBERON:0004921,7.12e-12,114;UBERON:0002193,9.18e-10,48;UBERON:0002405,9.18e-10,48;UBERON:0000160,3.63e-09,31;UBERON:0005409,7.78e-09,47;UBERON:0002390,1.57e-08,45;UBERON:0003061,1.57e-08,45;UBERON:0004177,2.11e-08,29;UBERON:0005057,2.11e-08,29;UBERON:0000490,4.07e-08,66;UBERON:0000077,1.56e-07,35;UBERON:0002370,2.51e-07,23;UBERON:0000974,2.51e-07,23;UBERON:0004807,2.51e-07,23;UBERON:0005058,2.51e-07,23;UBERON:0003351,2.51e-07,23;UBERON:0009113,2.51e-07,23;UBERON:0003295,2.51e-07,23;UBERON:0009722,2.51e-07,23;UBERON:0005562,2.51e-07,23;UBERON:0007690,2.51e-07,23;UBERON:0005911,3.53e-07,69;UBERON:0003408,3.62e-07,24;UBERON:0004923,3.69e-07,24;UBERON:0003081,5.32e-07,87;UBERON:0006562,6.91e-07,24;UBERON:0001557,6.91e-07,24;UBERON:0001042,6.91e-07,24;UBERON:0008814,6.91e-07,24;UBERON:0009145,6.91e-07,24 | |||
|phase1_expression=4.00372117761985,11.5161884520989,9.09998478779072,18.7527811010235,17.5313505481222,6.37941233265181,4.20502753071946,17.5607719880544,4.78681655315667,10.5329036844897,2.91070545983358,5.10541817570153,13.5248576645653,19.4073293370174,4.33042690360362,6.47920855647443,3.49780939064073,17.0349569293448,18.921791837592,10.6097412949508,5.69790044012167,5.36171136484781,4.70159620450084,10.7194923271582,6.8822784320151,5.7423196411502,8.18447792702242,10.5580904016086,16.9120843316173,23.4388020676736,8.86922042621219,0.635030673459631,4.92051830067656,0,5.48818077527422,4.3221007793208,4.08338712524738,5.85944283031671,7.813353445238,17.7998072951091,7.05877785637217,6.14740936462601,9.71020706062307,8.05739635043695,7.80602370390262,5.32285581268876,2.34717403304412,1.09012578190223,0.219686182734472,0.777719596297134,0.839918529752175,0,13.2548258785612,14.5072428402269,14.452033363126,3.08711323243136,4.58453503902011,5.15672092277442,0.404632921719196,0,0,0.338844532069132,0,2.6996991518442,2.96659908770092,0.7104801149461,0.299600110518405,0.768436610643109,0.829516898467821,0.405017814995072,0.420649922702764,1.14260393761521,0.662605622854841,0.244981598429908,0.575072826109418,0,2.20231761998777,2.42605942361857,2.15049146558741,0.659431438650969,0.914876436024097,1.56274011167028,0.558365998002762,3.37657566019008,1.83357897332172,2.35702868378934,1.42371680799103,1.1183966749518,4.69502398665741,6.57472572929034,6.95674772884027,6.0229671388697,1.3599426674155,1.61910957491345,5.19821133958135,4.92829575807069,5.75822122540183,2.55645483867087,1.29893002301434,0.70667914902068,4.92951969218382,10.2661181931454,0,0,1.29894624606728,0.760079596425296,1.51657333504435,7.4219521817389,22.2686579936568,4.00793775475027,2.77576522825817,3.34912026143355,2.30615497256059,3.46662073271032,6.11461277105665,2.63899841792318,6.92145909656247,6.65157041831594,7.96149496754887,3.07357014900077,4.41683036920787,3.87900202508178,3.72783522436244,2.92780797011547,2.72280718857492,12.517395705221,15.3363359367578,4.79922184794726,10.5468288470644,1.64769703345305,0.457500602818626,0.753926112677186,2.08589184230732,4.85859368927628,1.87009240103604,3.0825839982874,7.23059483337246,5.47390670684409,4.29628689337247,2.10441855886474,1.95180664444056,1.14951052216736,1.62055916824814,3.31550599238573,4.42237244483631,3.45907044769094,2.71735001223214,1.03481348295606,0.646703978798527,4.16033376369202,2.46331573829528,2.41115305670332,4.17070873838397,3.83077383174383,6.1734640922383,3.58261680273288,4.91549231119264,7.20574139921202,6.81992398549422,1.24275463521301,2.11073453982987,1.98068267607116,2.84093682702252,1.77087808572663,2.31400669331067,2.32533944750408,1.60964040839772,5.02090972178829,3.12663714835613,3.61168420974009,4.29664690593035,4.09359964790931,4.17145219052996,4.69722465661301,3.15434922846191,2.46971069710283,12.2254949704005,11.6358249331959,2.13288250535234,4.64473343720877,4.51036114627327,4.23535401709019,4.00280478920767,4.1849637744763,6.16887780007865,9.71723832871664,14.0747716928151,15.7175612912509,11.1129529657898,12.5834717211591,12.1037307929829,12.7450414882795,0.379335801906163,2.05647322697512,0,2.03651327845314,2.90928730751439,4.76923575254166,2.78240763346732,3.98547399544926,1.255989822731,3.08492909804501,3.26097889795864,2.50267658574141,3.53806191203765,1.34917267430912,2.63718157805054,1.92941727801933,2.5462585178142,2.87696137450811,6.64754429777645,1.64736847912849,7.18841032636773,7.44281895337007,4.99260276983297,3.53610429125956,3.40855085691633,4.82443521363367,8.86815312799702,1.32643988239339,2.11854469374634,3.22515662972857,2.11221223459652,4.85768146581266,4.99891645860629,5.65887578787617,6.9359463406724,6.86540537911202,3.98636921643718,10.3233888270915,6.38934432903814,11.8612228036839,24.1266054302836,14.6854534631052,2.45882136509518,3.31124095565679,2.0871576698413,1.52375192569864,3.27869890753351,4.54447668967871,1.57754109708128,2.34263246577983,1.93881057959519,3.10659437338318,3.11918143715352,3.11384183867716,2.83367491172426,1.16902343164525,2.76701444562566,2.24924921495265,2.6968616189571,1.42452482933804,6.67836533349662,4.28922319728592,2.65490276679926,1.94224508923985,0.906970670894253,3.58349651536206,1.77181135728464,3.68922177532713,8.78656196771952,3.27180356529755,3.20847640546249,4.74055136903724,5.27093042874994,3.09406629744561,5.10659408630682,2.34079422240703,1.16422815404479,1.28602221018955,5.32020700926821,4.45922044005176,2.96188237083818,3.95804433848979,4.69343416127421,3.38931313382112,1.98475558249466,7.4198813823666,6.62004149453213,6.63442174209714,5.96861720015682,8.37118588699812,14.5740418314925,1.8542530201051,4.95525554313773,3.50857675537478,6.66700298530962,8.09984365120171,8.47504211870356,6.17701067657611,18.1876920093425,14.1350966846895,14.5109972494645,2.86401185404534,0.949007980743406,3.45643094115643,2.59212817972323,4.39085421630384,5.24070152990826,4.04593039154462,4.3806331534428,3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| |||
|short_description=p2@Xrn1 | |||
}} |
Revision as of 19:01, 14 September 2013
Short description: | p2@Xrn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Xrn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:452 |
Association with transcript: | 60bp_to_ENSMUST00000034981, NM_011916, uc009rbv.1, uc009rbw.1, uc009rbx.1, uc009rby.1_5end |
EntrezGene: | Xrn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.