FFCP PHASE1:Mm9::chr7:133512954..133512971,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=16797|HGNC=|MCL_coexpression_id=4|UniProt=O54957,Q546H1|association_with_transcript=76bp_to_NM_010689,uc009jqx.1_5end|description=CAGE_peak_4_at_Lat_5end|id=chr7:133512954..133512971,-|ontology_enrichment_celltype=CL:0000084!1.43e-10!11;CL:0000827!1.43e-10!11;CL:0000791!2.31e-09!9;CL:0000789!2.31e-09!9;CL:0002420!2.31e-09!9;CL:0002419!2.31e-09!9;CL:0000790!2.31e-09!9;CL:0000838!2.40e-09!12;CL:0000624!1.65e-08!8;CL:0000542!2.55e-08!13;CL:0000051!2.55e-08!13;CL:0000988!2.93e-08!32;CL:0002032!2.93e-08!32;CL:0000037!2.93e-08!32;CL:0000566!2.93e-08!32;CL:0000837!2.93e-08!32;CL:0002031!8.94e-08!25|ontology_enrichment_celltype_v019_2=CL:0000791,1.80e-20,9;CL:0000789,1.80e-20,9;CL:0002420,1.80e-20,9;CL:0002419,1.80e-20,9;CL:0000790,1.80e-20,9;CL:0000084,6.46e-20,11;CL:0000827,6.46e-20,11;CL:0000624,2.12e-18,8;CL:0000838,4.38e-18,12;CL:0000542,1.55e-16,13;CL:0000051,1.55e-16,13;CL:0000893,6.28e-14,6;CL:0002489,6.28e-14,6;CL:0000898,6.28e-14,6;CL:0000809,6.28e-14,6;CL:0000810,6.28e-14,6;CL:0000895,6.28e-14,6;CL:0000808,6.28e-14,6;CL:0000894,6.28e-14,6;CL:0000806,6.28e-14,6;CL:0000807,6.28e-14,6;CL:0000805,6.28e-14,6;CL:0002425,6.28e-14,6;CL:0002436,6.28e-14,6;CL:0002427,6.28e-14,6;CL:0002428,6.28e-14,6;CL:0002429,6.28e-14,6;CL:0002433,6.28e-14,6;CL:0002431,6.28e-14,6;CL:0002432,6.28e-14,6;CL:0000738,3.64e-12,17;CL:0002087,3.64e-12,17;CL:0002031,5.11e-11,25;CL:0000988,1.74e-09,32;CL:0002032,1.74e-09,32;CL:0000037,1.74e-09,32;CL:0000837,1.74e-09,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!9.14e-18!48;UBERON:0002390!2.23e-17!45;UBERON:0003061!2.23e-17!45;UBERON:0003408!3.95e-17!24;UBERON:0004177!3.98e-17!29;UBERON:0002370!2.43e-16!23;UBERON:0000974!2.43e-16!23;UBERON:0004807!2.43e-16!23;UBERON:0005058!2.43e-16!23;UBERON:0003351!2.43e-16!23;UBERON:0009113!2.43e-16!23;UBERON:0003295!2.43e-16!23;UBERON:0009722!2.43e-16!23;UBERON:0005562!2.43e-16!23;UBERON:0007690!2.43e-16!23;UBERON:0006562!2.70e-15!24;UBERON:0001557!2.70e-15!24;UBERON:0001042!2.70e-15!24;UBERON:0008814!2.70e-15!24;UBERON:0009145!2.70e-15!24;UBERON:0000072!1.19e-12!27;UBERON:0001004!3.08e-12!42;UBERON:0002405!3.20e-12!70;UBERON:0000065!1.44e-11!41;UBERON:0003081!1.54e-11!88;UBERON:0005057!8.89e-10!51;UBERON:0000063!4.92e-09!35|ontology_enrichment_uberon_v019_2=UBERON:0003408,6.17e-42,24;UBERON:0002370,5.43e-40,23;UBERON:0000974,5.43e-40,23;UBERON:0004807,5.43e-40,23;UBERON:0005058,5.43e-40,23;UBERON:0003351,5.43e-40,23;UBERON:0009113,5.43e-40,23;UBERON:0003295,5.43e-40,23;UBERON:0009722,5.43e-40,23;UBERON:0005562,5.43e-40,23;UBERON:0007690,5.43e-40,23;UBERON:0006562,4.09e-38,24;UBERON:0001557,4.09e-38,24;UBERON:0001042,4.09e-38,24;UBERON:0008814,4.09e-38,24;UBERON:0009145,4.09e-38,24;UBERON:0004177,5.21e-37,29;UBERON:0005057,5.21e-37,29;UBERON:0000072,2.56e-33,27;UBERON:0000077,9.96e-30,35;UBERON:0002193,1.42e-26,48;UBERON:0002405,1.42e-26,48;UBERON:0002390,2.61e-26,45;UBERON:0003061,2.61e-26,45;UBERON:0007811,3.34e-26,36;UBERON:0001004,7.92e-24,42;UBERON:0000065,2.77e-22,41;UBERON:0000153,4.39e-21,43;UBERON:0003929,8.20e-14,55;UBERON:0002368,2.97e-12,60;UBERON:0001041,3.20e-12,80;UBERON:0002530,3.35e-12,65;UBERON:0005911,3.74e-11,69;UBERON:0003081,8.01e-11,87;UBERON:0000490,1.06e-10,66;UBERON:0000949,2.08e-09,72;UBERON:0004921,1.05e-07,114;UBERON:0001007,1.79e-07,116;UBERON:0001555,1.79e-07,116;UBERON:0007026,1.79e-07,116;UBERON:0004119,3.00e-07,118;UBERON:0000925,3.00e-07,118;UBERON:0006595,3.00e-07,118|phase1_expression=0,0,0,0,0,0,0,29.1818710977962,23.65250532148,25.5130333690973,2.22583358693156,2.47293692885543,26.3649124094057,27.3625859571462,0.999329285446988,0.607425802169478,0,2.36596624018678,1.23402990245165,0.42438965179803,1.02051948181284,1.09220046320974,0.522399578277871,0.159992422793407,0,0,0,0.215471232685889,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.2891235384424,20.5017217476903,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0.075726193333184,0,0.289864488701678,0,0,0,0,0,1.40444420131752,0,0,0,0,0,0,0,0,0,0,1.1418387971906,4.66088190564909,0,0.173485326766136,0,0,0,0,0.125666591329675,0,0.289198713839823,0.884610551949874,0,0.220841518460394,0,1.86391761218122,0,0,0,1.1981512450592,0,0.381210681219194,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0.257347907114715,0.852490498186778,0,0,0.180062061461015,0,0,0,0.232533944750408,0,0.233530684734339,0,0.656669856316381,0.162137619091711,0.438599962275997,0.439100230582101,0.402619256281115,0,0,0.330418782983798,0,0,0,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0.589676985339609,0.224862112384854,0,0.241177159752417,0,0,0.162135226775035,0,0,0,0,0,0,0,1.10851914099963,0,0,0,0,0.167506257441816,0,0,0.157635144106191,0.44292937929755,0.478364305972461,0.327726629431476,0.863424909329478,0,0,0.54390568381871,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.948110273807448,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0.322928853391811,0,0,0,0,0,2.22132145037209,0,0,0.565105371014073,0.683471138605126,1.14389086603261,7.30907248973578,5.17820373597535,7.04819866402561,0,0,0,0,0,0,0,0.0826534557253359,0,0,1.86401793926078,0,0,0,0,0,0,0.117357238645754,0,0.104859344425711,0,0,75.2106467095064,4.25722952109345,13.1470025170979,20.6574108534694,25.6008174804498,40.7296777301593,43.9915345243086,41.3530676088816,39.9827141794665,49.4582175190949,50.2114401981466,59.2543914897695,47.2400142454018,61.82788125405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0.222246727801615,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0.377252682772152,0,0.256100609619477,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0.342869252385415,0.177475806159338,0.476872379894642,0.436039249896986,0.188218760830661,0,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.309873682371932,0.192906610981141,0,0.935726433781634,0.214871054048298,0,0.220591419119515,0.463735671240843|short_description=p4@Lat}} | ||
|EntrezGene=16797 | |||
|HGNC= | |||
|MCL_coexpression_id=4 | |||
|UniProt=O54957,Q546H1 | |||
|association_with_transcript=76bp_to_NM_010689,uc009jqx.1_5end | |||
|description=CAGE_peak_4_at_Lat_5end | |||
|id=chr7:133512954..133512971,- | |||
|ontology_enrichment_celltype=CL:0000084!1.43e-10!11;CL:0000827!1.43e-10!11;CL:0000791!2.31e-09!9;CL:0000789!2.31e-09!9;CL:0002420!2.31e-09!9;CL:0002419!2.31e-09!9;CL:0000790!2.31e-09!9;CL:0000838!2.40e-09!12;CL:0000624!1.65e-08!8;CL:0000542!2.55e-08!13;CL:0000051!2.55e-08!13;CL:0000988!2.93e-08!32;CL:0002032!2.93e-08!32;CL:0000037!2.93e-08!32;CL:0000566!2.93e-08!32;CL:0000837!2.93e-08!32;CL:0002031!8.94e-08!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.80e-20,9;CL:0000789,1.80e-20,9;CL:0002420,1.80e-20,9;CL:0002419,1.80e-20,9;CL:0000790,1.80e-20,9;CL:0000084,6.46e-20,11;CL:0000827,6.46e-20,11;CL:0000624,2.12e-18,8;CL:0000838,4.38e-18,12;CL:0000542,1.55e-16,13;CL:0000051,1.55e-16,13;CL:0000893,6.28e-14,6;CL:0002489,6.28e-14,6;CL:0000898,6.28e-14,6;CL:0000809,6.28e-14,6;CL:0000810,6.28e-14,6;CL:0000895,6.28e-14,6;CL:0000808,6.28e-14,6;CL:0000894,6.28e-14,6;CL:0000806,6.28e-14,6;CL:0000807,6.28e-14,6;CL:0000805,6.28e-14,6;CL:0002425,6.28e-14,6;CL:0002436,6.28e-14,6;CL:0002427,6.28e-14,6;CL:0002428,6.28e-14,6;CL:0002429,6.28e-14,6;CL:0002433,6.28e-14,6;CL:0002431,6.28e-14,6;CL:0002432,6.28e-14,6;CL:0000738,3.64e-12,17;CL:0002087,3.64e-12,17;CL:0002031,5.11e-11,25;CL:0000988,1.74e-09,32;CL:0002032,1.74e-09,32;CL:0000037,1.74e-09,32;CL:0000837,1.74e-09,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!9.14e-18!48;UBERON:0002390!2.23e-17!45;UBERON:0003061!2.23e-17!45;UBERON:0003408!3.95e-17!24;UBERON:0004177!3.98e-17!29;UBERON:0002370!2.43e-16!23;UBERON:0000974!2.43e-16!23;UBERON:0004807!2.43e-16!23;UBERON:0005058!2.43e-16!23;UBERON:0003351!2.43e-16!23;UBERON:0009113!2.43e-16!23;UBERON:0003295!2.43e-16!23;UBERON:0009722!2.43e-16!23;UBERON:0005562!2.43e-16!23;UBERON:0007690!2.43e-16!23;UBERON:0006562!2.70e-15!24;UBERON:0001557!2.70e-15!24;UBERON:0001042!2.70e-15!24;UBERON:0008814!2.70e-15!24;UBERON:0009145!2.70e-15!24;UBERON:0000072!1.19e-12!27;UBERON:0001004!3.08e-12!42;UBERON:0002405!3.20e-12!70;UBERON:0000065!1.44e-11!41;UBERON:0003081!1.54e-11!88;UBERON:0005057!8.89e-10!51;UBERON:0000063!4.92e-09!35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003408,6.17e-42,24;UBERON:0002370,5.43e-40,23;UBERON:0000974,5.43e-40,23;UBERON:0004807,5.43e-40,23;UBERON:0005058,5.43e-40,23;UBERON:0003351,5.43e-40,23;UBERON:0009113,5.43e-40,23;UBERON:0003295,5.43e-40,23;UBERON:0009722,5.43e-40,23;UBERON:0005562,5.43e-40,23;UBERON:0007690,5.43e-40,23;UBERON:0006562,4.09e-38,24;UBERON:0001557,4.09e-38,24;UBERON:0001042,4.09e-38,24;UBERON:0008814,4.09e-38,24;UBERON:0009145,4.09e-38,24;UBERON:0004177,5.21e-37,29;UBERON:0005057,5.21e-37,29;UBERON:0000072,2.56e-33,27;UBERON:0000077,9.96e-30,35;UBERON:0002193,1.42e-26,48;UBERON:0002405,1.42e-26,48;UBERON:0002390,2.61e-26,45;UBERON:0003061,2.61e-26,45;UBERON:0007811,3.34e-26,36;UBERON:0001004,7.92e-24,42;UBERON:0000065,2.77e-22,41;UBERON:0000153,4.39e-21,43;UBERON:0003929,8.20e-14,55;UBERON:0002368,2.97e-12,60;UBERON:0001041,3.20e-12,80;UBERON:0002530,3.35e-12,65;UBERON:0005911,3.74e-11,69;UBERON:0003081,8.01e-11,87;UBERON:0000490,1.06e-10,66;UBERON:0000949,2.08e-09,72;UBERON:0004921,1.05e-07,114;UBERON:0001007,1.79e-07,116;UBERON:0001555,1.79e-07,116;UBERON:0007026,1.79e-07,116;UBERON:0004119,3.00e-07,118;UBERON:0000925,3.00e-07,118;UBERON:0006595,3.00e-07,118 | |||
|phase1_expression=0,0,0,0,0,0,0,29.1818710977962,23.65250532148,25.5130333690973,2.22583358693156,2.47293692885543,26.3649124094057,27.3625859571462,0.999329285446988,0.607425802169478,0,2.36596624018678,1.23402990245165,0.42438965179803,1.02051948181284,1.09220046320974,0.522399578277871,0.159992422793407,0,0,0,0.215471232685889,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.2891235384424,20.5017217476903,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0.075726193333184,0,0.289864488701678,0,0,0,0,0,1.40444420131752,0,0,0,0,0,0,0,0,0,0,1.1418387971906,4.66088190564909,0,0.173485326766136,0,0,0,0,0.125666591329675,0,0.289198713839823,0.884610551949874,0,0.220841518460394,0,1.86391761218122,0,0,0,1.1981512450592,0,0.381210681219194,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0.257347907114715,0.852490498186778,0,0,0.180062061461015,0,0,0,0.232533944750408,0,0.233530684734339,0,0.656669856316381,0.162137619091711,0.438599962275997,0.439100230582101,0.402619256281115,0,0,0.330418782983798,0,0,0,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0.589676985339609,0.224862112384854,0,0.241177159752417,0,0,0.162135226775035,0,0,0,0,0,0,0,1.10851914099963,0,0,0,0,0.167506257441816,0,0,0.157635144106191,0.44292937929755,0.478364305972461,0.327726629431476,0.863424909329478,0,0,0.54390568381871,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.948110273807448,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0.322928853391811,0,0,0,0,0,2.22132145037209,0,0,0.565105371014073,0.683471138605126,1.14389086603261,7.30907248973578,5.17820373597535,7.04819866402561,0,0,0,0,0,0,0,0.0826534557253359,0,0,1.86401793926078,0,0,0,0,0,0,0.117357238645754,0,0.104859344425711,0,0,75.2106467095064,4.25722952109345,13.1470025170979,20.6574108534694,25.6008174804498,40.7296777301593,43.9915345243086,41.3530676088816,39.9827141794665,49.4582175190949,50.2114401981466,59.2543914897695,47.2400142454018,61.82788125405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0.222246727801615,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0.377252682772152,0,0.256100609619477,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0.342869252385415,0.177475806159338,0.476872379894642,0.436039249896986,0.188218760830661,0,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.309873682371932,0.192906610981141,0,0.935726433781634,0.214871054048298,0,0.220591419119515,0.463735671240843 | |||
|short_description=p4@Lat | |||
}} |
Revision as of 11:45, 14 September 2013
Short description: | p4@Lat |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Lat_5end |
Coexpression cluster: | MCL_coexpression_mm9:4 |
Association with transcript: | 76bp_to_NM_010689, uc009jqx.1_5end |
EntrezGene: | Lat |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.