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FFCP PHASE1:Mm9::chr17:47642022..47642033,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=12445|HGNC=|MCL_coexpression_id=4|UniProt=P30282,Q3TSW4,Q3TWY0|association_with_transcript=22bp_to_ENSMUST00000171031,NM_001081635,NM_001081636,uc008cvk.1,uc008cvl.1,uc008cvm.1_5end|description=CAGE_peak_13_at_Ccnd3_5end|id=chr17:47642022..47642033,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002031,7.24e-11,25;CL:0000553,4.65e-09,6;CL:0000556,4.65e-09,6;CL:0000988,6.06e-08,32;CL:0002032,6.06e-08,32;CL:0000037,6.06e-08,32;CL:0000837,6.06e-08,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!9.42e-08!29|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.59e-22,48;UBERON:0002405,5.59e-22,48;UBERON:0002390,1.25e-21,45;UBERON:0003061,1.25e-21,45;UBERON:0003408,4.25e-21,24;UBERON:0002370,1.77e-19,23;UBERON:0000974,1.77e-19,23;UBERON:0004807,1.77e-19,23;UBERON:0005058,1.77e-19,23;UBERON:0003351,1.77e-19,23;UBERON:0009113,1.77e-19,23;UBERON:0003295,1.77e-19,23;UBERON:0009722,1.77e-19,23;UBERON:0005562,1.77e-19,23;UBERON:0007690,1.77e-19,23;UBERON:0004177,3.63e-19,29;UBERON:0005057,3.63e-19,29;UBERON:0006562,1.60e-18,24;UBERON:0001557,1.60e-18,24;UBERON:0001042,1.60e-18,24;UBERON:0008814,1.60e-18,24;UBERON:0009145,1.60e-18,24;UBERON:0000072,4.45e-16,27;UBERON:0000077,3.38e-15,35;UBERON:0007811,7.92e-13,36;UBERON:0003081,9.60e-12,87;UBERON:0001004,1.77e-10,42;UBERON:0000153,3.76e-10,43;UBERON:0000065,1.98e-09,41;UBERON:0000926,8.68e-08,120;UBERON:0004120,8.68e-08,120;UBERON:0006603,8.68e-08,120;UBERON:0002530,2.52e-07,65|phase1_expression=0.320297694209588,0,0,0,0,0,0.233612640595526,2.1950964985068,0.281577444303333,0,0,0.398860794976682,3.93761678841773,3.14713448708391,0.999329285446988,1.01237633694913,1.39912375625629,1.57731082679119,1.64537320326887,1.69755860719212,0.510259740906419,0.397163804803541,0.783599367416806,0,0.22940928106717,0,0,0,0.190023419456374,0,0,0.635030673459631,0,0,0,0.332469290716985,0.204169356262369,0.837063261473815,0,2.61761871986899,2.94115744015507,2.04913645487534,0,0.125896817975577,0,0.183546752161682,0,0,0.219686182734472,0.194429899074283,0.139986421625363,0,1.67782606057736,1.45072428402269,2.35265659399725,0,0.85960031981627,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.281686839553361,0,0,0,0,0,0,0.45673551887624,1.55362730188303,0.742210695324124,0.346970653532272,0.304465478312141,0,0.452167921657868,0.23517741427141,0.376999773989026,0,0.144599356919912,0.884610551949874,0.323533699894818,0.220841518460394,0,0,0,0,0.255457055208591,0.359445373517761,0.599902730993408,0.381210681219194,0.299581278809645,0,0,0,0,0,0.162241263067758,0.712875546952214,1.36847667671102,0,0.210441855886474,0,0,0.180062129805349,0.30140963567143,0.204109497453984,0.2562274405697,0.0937017245597288,0,0.646703978798527,0.756424320671277,0.175951124163949,0,0,0.696504333044333,0,0.796137067273973,0,0,0,0.621377317606506,0,0.36012412292203,0.23674473558521,0.196764231747404,0.308534225774757,0.232533944750408,0.804820204198858,1.05088808130453,0.329119699826961,0,0.405344047729279,0.584799949701329,0.658650345873152,0.402619256281115,0,0,0,0,0.426576501070468,0.464473343720877,0.38660238396628,0,0,0.570676878337677,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0.432276099749388,0.199141273254367,0,0.228497025219458,0,0.203651327845314,0.581857461502877,0.420814919341911,0.505892296994058,0.295220295959204,0.941992367048249,0.370191491765402,0,0,0,0.449724224769707,0.202860121388503,0,0.50925170356284,0.575392274901621,0.648540907100142,0,0,0.744281895337007,0,0,0,0.482443521363367,0.369506380333209,0.947457058852424,0,0.169745085775188,0.234690248288502,0.670025029767263,0.238043640886014,0.390267295715598,0.315270288212382,0.221464689648775,0.318909537314974,0.81931657357869,0,0.433947175744535,1.50791283939272,0,0.491764273019036,1.10374698521893,0.321101179975584,0.117211686592203,0.163934945376675,0.252470927204373,0,0,0.430846795465598,0.716906393857656,0,0.849229592366497,0.809621403349789,1.16902343164525,0.395287777946524,0,0.567760340833074,0.178065603667255,0.488660878060728,0.164970122972535,0,0.485561272309963,0,0,0,0.614870295887855,0.775284879504663,0,0,0.632073515871632,0,0,0.680879211507576,0.36012218806262,0.517434735131018,0,0.177340233642274,0.356737635204141,0.493647061806363,0,0.23467170806371,0,0.661585194164886,0.32977250588296,0.645857706783622,0.120625849856312,0.119372344003136,0.164140899745061,0.582961673259701,0,0.854354403989263,0.206386867963223,1.48155621895769,0.565105371014073,0.546776910884101,1.37266903923914,1.35982743995084,1.95932033253121,1.10559979043539,0,0.316335993581135,0.813277868507395,0.216010681643603,0.209088296014469,0,0.134864346384821,0.247960367176008,0,0,1.24267862617385,0,0.149516546043979,0.165458490457098,0.777804753376191,0.516639293910924,0.168956125490778,0.58678619322877,0.13020438484395,0.209718688851422,0,0,6.00421129193539,0.405450430580328,0.102710957164827,1.94881234466693,2.32734704367726,6.75516606256301,4.44723163223885,6.35064966850682,7.26958439626663,5.71551049912499,9.07435666231565,10.1356195969343,10.9681499469976,13.4408437508804,0,0,0,0.167884616364078,0.579568782096571,0.187682475451182,0.36630324853453,0,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0.399024873401031,0.170733605754134,0.243106717068294,0,0,0.222246727801615,0,0,0.505394423527595,0.50695859978048,0.565879024158229,0.187283014939765,0.384150914429216,0.402048282689293,0,0.115884325944855,0.38581844092741,0.824171801606613,0.294397840268795,0.342869252385415,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.25384382367503,0.182927972872773,0.263069711437843,0.271608227691724,0.561142271657738,0.237270036248348,0.492522411877817,0,0.154936841185966,0.192906610981141,0,0.701794825336225,0.429742108096597,0.956441660344217,0.220591419119515,0|short_description=p13@Ccnd3}}
|EntrezGene=12445
|HGNC=
|MCL_coexpression_id=4
|UniProt=P30282,Q3TSW4,Q3TWY0
|association_with_transcript=22bp_to_ENSMUST00000171031,NM_001081635,NM_001081636,uc008cvk.1,uc008cvl.1,uc008cvm.1_5end
|description=CAGE_peak_13_at_Ccnd3_5end
|id=chr17:47642022..47642033,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002031,7.24e-11,25;CL:0000553,4.65e-09,6;CL:0000556,4.65e-09,6;CL:0000988,6.06e-08,32;CL:0002032,6.06e-08,32;CL:0000037,6.06e-08,32;CL:0000837,6.06e-08,32
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!9.42e-08!29
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.59e-22,48;UBERON:0002405,5.59e-22,48;UBERON:0002390,1.25e-21,45;UBERON:0003061,1.25e-21,45;UBERON:0003408,4.25e-21,24;UBERON:0002370,1.77e-19,23;UBERON:0000974,1.77e-19,23;UBERON:0004807,1.77e-19,23;UBERON:0005058,1.77e-19,23;UBERON:0003351,1.77e-19,23;UBERON:0009113,1.77e-19,23;UBERON:0003295,1.77e-19,23;UBERON:0009722,1.77e-19,23;UBERON:0005562,1.77e-19,23;UBERON:0007690,1.77e-19,23;UBERON:0004177,3.63e-19,29;UBERON:0005057,3.63e-19,29;UBERON:0006562,1.60e-18,24;UBERON:0001557,1.60e-18,24;UBERON:0001042,1.60e-18,24;UBERON:0008814,1.60e-18,24;UBERON:0009145,1.60e-18,24;UBERON:0000072,4.45e-16,27;UBERON:0000077,3.38e-15,35;UBERON:0007811,7.92e-13,36;UBERON:0003081,9.60e-12,87;UBERON:0001004,1.77e-10,42;UBERON:0000153,3.76e-10,43;UBERON:0000065,1.98e-09,41;UBERON:0000926,8.68e-08,120;UBERON:0004120,8.68e-08,120;UBERON:0006603,8.68e-08,120;UBERON:0002530,2.52e-07,65
|phase1_expression=0.320297694209588,0,0,0,0,0,0.233612640595526,2.1950964985068,0.281577444303333,0,0,0.398860794976682,3.93761678841773,3.14713448708391,0.999329285446988,1.01237633694913,1.39912375625629,1.57731082679119,1.64537320326887,1.69755860719212,0.510259740906419,0.397163804803541,0.783599367416806,0,0.22940928106717,0,0,0,0.190023419456374,0,0,0.635030673459631,0,0,0,0.332469290716985,0.204169356262369,0.837063261473815,0,2.61761871986899,2.94115744015507,2.04913645487534,0,0.125896817975577,0,0.183546752161682,0,0,0.219686182734472,0.194429899074283,0.139986421625363,0,1.67782606057736,1.45072428402269,2.35265659399725,0,0.85960031981627,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.281686839553361,0,0,0,0,0,0,0.45673551887624,1.55362730188303,0.742210695324124,0.346970653532272,0.304465478312141,0,0.452167921657868,0.23517741427141,0.376999773989026,0,0.144599356919912,0.884610551949874,0.323533699894818,0.220841518460394,0,0,0,0,0.255457055208591,0.359445373517761,0.599902730993408,0.381210681219194,0.299581278809645,0,0,0,0,0,0.162241263067758,0.712875546952214,1.36847667671102,0,0.210441855886474,0,0,0.180062129805349,0.30140963567143,0.204109497453984,0.2562274405697,0.0937017245597288,0,0.646703978798527,0.756424320671277,0.175951124163949,0,0,0.696504333044333,0,0.796137067273973,0,0,0,0.621377317606506,0,0.36012412292203,0.23674473558521,0.196764231747404,0.308534225774757,0.232533944750408,0.804820204198858,1.05088808130453,0.329119699826961,0,0.405344047729279,0.584799949701329,0.658650345873152,0.402619256281115,0,0,0,0,0.426576501070468,0.464473343720877,0.38660238396628,0,0,0.570676878337677,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0.432276099749388,0.199141273254367,0,0.228497025219458,0,0.203651327845314,0.581857461502877,0.420814919341911,0.505892296994058,0.295220295959204,0.941992367048249,0.370191491765402,0,0,0,0.449724224769707,0.202860121388503,0,0.50925170356284,0.575392274901621,0.648540907100142,0,0,0.744281895337007,0,0,0,0.482443521363367,0.369506380333209,0.947457058852424,0,0.169745085775188,0.234690248288502,0.670025029767263,0.238043640886014,0.390267295715598,0.315270288212382,0.221464689648775,0.318909537314974,0.81931657357869,0,0.433947175744535,1.50791283939272,0,0.491764273019036,1.10374698521893,0.321101179975584,0.117211686592203,0.163934945376675,0.252470927204373,0,0,0.430846795465598,0.716906393857656,0,0.849229592366497,0.809621403349789,1.16902343164525,0.395287777946524,0,0.567760340833074,0.178065603667255,0.488660878060728,0.164970122972535,0,0.485561272309963,0,0,0,0.614870295887855,0.775284879504663,0,0,0.632073515871632,0,0,0.680879211507576,0.36012218806262,0.517434735131018,0,0.177340233642274,0.356737635204141,0.493647061806363,0,0.23467170806371,0,0.661585194164886,0.32977250588296,0.645857706783622,0.120625849856312,0.119372344003136,0.164140899745061,0.582961673259701,0,0.854354403989263,0.206386867963223,1.48155621895769,0.565105371014073,0.546776910884101,1.37266903923914,1.35982743995084,1.95932033253121,1.10559979043539,0,0.316335993581135,0.813277868507395,0.216010681643603,0.209088296014469,0,0.134864346384821,0.247960367176008,0,0,1.24267862617385,0,0.149516546043979,0.165458490457098,0.777804753376191,0.516639293910924,0.168956125490778,0.58678619322877,0.13020438484395,0.209718688851422,0,0,6.00421129193539,0.405450430580328,0.102710957164827,1.94881234466693,2.32734704367726,6.75516606256301,4.44723163223885,6.35064966850682,7.26958439626663,5.71551049912499,9.07435666231565,10.1356195969343,10.9681499469976,13.4408437508804,0,0,0,0.167884616364078,0.579568782096571,0.187682475451182,0.36630324853453,0,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0.399024873401031,0.170733605754134,0.243106717068294,0,0,0.222246727801615,0,0,0.505394423527595,0.50695859978048,0.565879024158229,0.187283014939765,0.384150914429216,0.402048282689293,0,0.115884325944855,0.38581844092741,0.824171801606613,0.294397840268795,0.342869252385415,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.25384382367503,0.182927972872773,0.263069711437843,0.271608227691724,0.561142271657738,0.237270036248348,0.492522411877817,0,0.154936841185966,0.192906610981141,0,0.701794825336225,0.429742108096597,0.956441660344217,0.220591419119515,0
|short_description=p13@Ccnd3
}}

Revision as of 14:42, 13 September 2013

Short description:p13@Ccnd3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_13_at_Ccnd3_5end
Coexpression cluster:MCL_coexpression_mm9:4
Association with transcript: 22bp_to_ENSMUST00000171031, NM_001081635, NM_001081636, uc008cvk.1, uc008cvl.1, uc008cvm.1_5end
EntrezGene:Ccnd3
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p13@Ccnd3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.20
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.40
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.94
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.15
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.58
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.65
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.62
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.35
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H91.55
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.37
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E31.05
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.51
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F21.48
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G31.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.96
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.11
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B56.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C51.95
thymus, embryo E17.CNhs10581.478-18C12.33
thymus, embryo E18.CNhs10595.1273-19G46.76
thymus, neonate N02.CNhs11181.1541-43F84.45
thymus, neonate N03.CNhs11137.2104-43C76.35
thymus, neonate N06.CNhs11197.681-26C47.27
thymus, neonate N07.CNhs11211.713-19D35.72
thymus, neonate N10.CNhs11194.748-24E49.07
thymus, neonate N20.CNhs11186.820-7A210.14
thymus, neonate N25.CNhs11125.1362-25G710.97
thymus, neonate N30.CNhs11132.1393-42G213.44
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hemolymphoid system5.59e-2248
immune system5.59e-2248
hematopoietic system1.25e-2145
blood island1.25e-2145
gland of gut4.25e-2124
thymus1.77e-1923
neck1.77e-1923
respiratory system epithelium1.77e-1923
hemolymphoid system gland1.77e-1923
pharyngeal epithelium1.77e-1923
thymic region1.77e-1923
pharyngeal gland1.77e-1923
entire pharyngeal arch endoderm1.77e-1923
thymus primordium1.77e-1923
early pharyngeal endoderm1.77e-1923
hemopoietic organ3.63e-1929
immune organ3.63e-1929
pharynx1.60e-1824
upper respiratory tract1.60e-1824
chordate pharynx1.60e-1824
pharyngeal arch system1.60e-1824
pharyngeal region of foregut1.60e-1824
segment of respiratory tract4.45e-1627
mixed endoderm/mesoderm-derived structure3.38e-1535
craniocervical region7.92e-1336
lateral plate mesoderm9.60e-1287
respiratory system1.77e-1042
anterior region of body3.76e-1043
respiratory tract1.98e-0941
mesoderm8.68e-08120
mesoderm-derived structure8.68e-08120
presumptive mesoderm8.68e-08120
gland2.52e-0765







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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