FFCP PHASE1:Mm9::chr18:56629179..56629195,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1271|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:56629179..56629195,+|id=chr18:56629179..56629195,+|ontology_enrichment_celltype=CL:0000988!1.67e-10!32;CL:0002032!1.67e-10!32;CL:0000037!1.67e-10!32;CL:0000566!1.67e-10!32;CL:0000837!1.67e-10!32;CL:0000838!1.74e-10!12;CL:0000084!1.64e-09!11;CL:0000827!1.64e-09!11;CL:0002031!2.31e-09!25;CL:0000542!2.51e-09!13;CL:0000051!2.51e-09!13;CL:0000791!3.89e-08!9;CL:0000789!3.89e-08!9;CL:0002420!3.89e-08!9;CL:0002419!3.89e-08!9;CL:0000790!3.89e-08!9;CL:0000624!3.70e-07!8;CL:0000553!7.70e-07!6;CL:0000556!7.70e-07!6|ontology_enrichment_celltype_v019_2=CL:0002031,7.74e-21,25;CL:0000838,4.51e-18,12;CL:0000542,1.65e-16,13;CL:0000051,1.65e-16,13;CL:0000084,7.25e-16,11;CL:0000827,7.25e-16,11;CL:0000988,2.19e-15,32;CL:0002032,2.19e-15,32;CL:0000037,2.19e-15,32;CL:0000837,2.19e-15,32;CL:0000553,5.25e-14,6;CL:0000556,5.25e-14,6;CL:0000791,1.12e-12,9;CL:0000789,1.12e-12,9;CL:0002420,1.12e-12,9;CL:0002419,1.12e-12,9;CL:0000790,1.12e-12,9;CL:0000738,4.19e-12,17;CL:0002087,4.19e-12,17;CL:0000624,1.58e-10,8;CL:0002320,1.69e-09,46;CL:0000134,1.69e-09,46;CL:0000050,4.64e-09,9;CL:0000219,1.57e-07,54;CL:0002027,2.35e-07,3;CL:0002006,2.35e-07,3;CL:0002024,2.35e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.73e-16!48;UBERON:0002390!3.86e-14!45;UBERON:0003061!3.86e-14!45;UBERON:0004177!6.88e-14!29;UBERON:0002405!2.97e-11!70;UBERON:0003408!1.28e-10!24;UBERON:0006562!3.83e-10!24;UBERON:0001557!3.83e-10!24;UBERON:0001042!3.83e-10!24;UBERON:0008814!3.83e-10!24;UBERON:0009145!3.83e-10!24;UBERON:0002370!6.43e-10!23;UBERON:0000974!6.43e-10!23;UBERON:0004807!6.43e-10!23;UBERON:0005058!6.43e-10!23;UBERON:0003351!6.43e-10!23;UBERON:0009113!6.43e-10!23;UBERON:0003295!6.43e-10!23;UBERON:0009722!6.43e-10!23;UBERON:0005562!6.43e-10!23;UBERON:0007690!6.43e-10!23;UBERON:0001004!7.55e-09!42;UBERON:0000065!2.84e-08!41;UBERON:0000072!3.00e-08!27;UBERON:0003081!3.84e-08!88;UBERON:0005057!7.23e-08!51;UBERON:0000063!7.63e-07!35;UBERON:0004119!9.60e-07!130;UBERON:0000925!9.60e-07!130;UBERON:0006595!9.60e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.37e-28,48;UBERON:0002405,4.37e-28,48;UBERON:0002390,4.46e-23,45;UBERON:0003061,4.46e-23,45;UBERON:0004177,3.08e-20,29;UBERON:0005057,3.08e-20,29;UBERON:0003408,1.58e-16,24;UBERON:0000077,5.17e-16,35;UBERON:0002370,4.89e-15,23;UBERON:0000974,4.89e-15,23;UBERON:0004807,4.89e-15,23;UBERON:0005058,4.89e-15,23;UBERON:0003351,4.89e-15,23;UBERON:0009113,4.89e-15,23;UBERON:0003295,4.89e-15,23;UBERON:0009722,4.89e-15,23;UBERON:0005562,4.89e-15,23;UBERON:0007690,4.89e-15,23;UBERON:0006562,2.81e-14,24;UBERON:0001557,2.81e-14,24;UBERON:0001042,2.81e-14,24;UBERON:0008814,2.81e-14,24;UBERON:0009145,2.81e-14,24;UBERON:0000072,2.45e-12,27;UBERON:0003081,3.61e-12,87;UBERON:0001004,3.92e-12,42;UBERON:0000065,5.16e-11,41;UBERON:0007811,7.11e-10,36;UBERON:0002384,1.69e-09,46;UBERON:0001041,6.31e-08,80;UBERON:0000153,9.88e-08,43;UBERON:0002465,1.28e-07,3;UBERON:0000926,4.18e-07,120;UBERON:0004120,4.18e-07,120;UBERON:0006603,4.18e-07,120|phase1_expression=0,0,0.454999239389536,0.30246421130683,0,0,0.233612640595526,2.96983643915625,5.20918271961167,3.7450324211519,0.171217968225505,0.398860794976682,13.0112554747716,13.2879011676876,2.99798785634096,2.83465374345756,2.09868563438444,23.1864691538305,22.7609959785526,29.2828859740641,0.680346321208558,1.39007331681239,1.56719873483361,2.71987118748791,2.2940928106717,0.57423196411502,0.430761996159075,0,0,0,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0.683045484958446,1.94204141212461,0,0,0,0,0,0,0,0,0,47.3146949082817,31.9159342484992,72.9323544139147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,0.5709193985953,25.1169747137757,0.742210695324124,0,0.304465478312141,0,0,0.352766121407114,0.125666591329675,0,0.86759614151947,0.884610551949874,0.161766849947409,1.10420759230197,1.45462575940567,0,0.292780797011547,0.209446706813455,0.510914110417183,0.599075622529601,0.599902730993408,0.889491589511453,0,0,0,0,0,0,0,0,1.7416975885413,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0.324275238183423,0.146199987425332,0.219550115291051,0.402619256281115,0,0,0.330418782983798,1.58670339998127,0,0,0.128867461322093,0,0,0,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0.432276099749388,0.199141273254367,0,0,0,0,0,0,0,0.295220295959204,0,0,0,0,0,0,0,0.241177159752417,0.50925170356284,0,0,0.549122826376163,0,0.372140947668503,0,0.505157755894224,0,0.482443521363367,1.84753190166605,0,0,0,0,0,0,0,0.315270288212382,0.44292937929755,0.478364305972461,1.96635977658886,2.07221978239075,0.578596234326046,0,0,0.491764273019036,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,0.494910368917606,0,0,0,0,0,0,0,0,0.356497378384721,0.948110273807448,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0.8244312647074,0.161464426695906,0,0.119372344003136,0.656563598980245,0.582961673259701,0,5.46786818553129,0.206386867963223,0.555583582109135,3.39063222608444,4.10082683163076,3.43167259809784,0,0.279902904647316,0.138199973804424,0,0,0,0,0,0.436725127492355,0,0.247960367176008,0,0.388844919875379,1.86401793926078,0,0,0,0,0,0,0,0,0,0,0,2.52808896502543,0,0.205421914329655,0.389762468933385,0.716106782669926,1.78813219303138,1.20195449519969,1.03382669022204,1.11063094942962,1.143102099825,1.31074040677893,1.94915761479505,2.11666051608725,2.45441494581295,0.226730383615211,0,0.0897138566094757,0,0.19318959403219,0.187682475451182,0.915758121336325,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0.128050304809739,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0.382576664137687,0,0.695603506861264|short_description=p@chr18:56629179..56629195,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1271 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr18:56629179..56629195,+ | |||
|id=chr18:56629179..56629195,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.67e-10!32;CL:0002032!1.67e-10!32;CL:0000037!1.67e-10!32;CL:0000566!1.67e-10!32;CL:0000837!1.67e-10!32;CL:0000838!1.74e-10!12;CL:0000084!1.64e-09!11;CL:0000827!1.64e-09!11;CL:0002031!2.31e-09!25;CL:0000542!2.51e-09!13;CL:0000051!2.51e-09!13;CL:0000791!3.89e-08!9;CL:0000789!3.89e-08!9;CL:0002420!3.89e-08!9;CL:0002419!3.89e-08!9;CL:0000790!3.89e-08!9;CL:0000624!3.70e-07!8;CL:0000553!7.70e-07!6;CL:0000556!7.70e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,7.74e-21,25;CL:0000838,4.51e-18,12;CL:0000542,1.65e-16,13;CL:0000051,1.65e-16,13;CL:0000084,7.25e-16,11;CL:0000827,7.25e-16,11;CL:0000988,2.19e-15,32;CL:0002032,2.19e-15,32;CL:0000037,2.19e-15,32;CL:0000837,2.19e-15,32;CL:0000553,5.25e-14,6;CL:0000556,5.25e-14,6;CL:0000791,1.12e-12,9;CL:0000789,1.12e-12,9;CL:0002420,1.12e-12,9;CL:0002419,1.12e-12,9;CL:0000790,1.12e-12,9;CL:0000738,4.19e-12,17;CL:0002087,4.19e-12,17;CL:0000624,1.58e-10,8;CL:0002320,1.69e-09,46;CL:0000134,1.69e-09,46;CL:0000050,4.64e-09,9;CL:0000219,1.57e-07,54;CL:0002027,2.35e-07,3;CL:0002006,2.35e-07,3;CL:0002024,2.35e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.73e-16!48;UBERON:0002390!3.86e-14!45;UBERON:0003061!3.86e-14!45;UBERON:0004177!6.88e-14!29;UBERON:0002405!2.97e-11!70;UBERON:0003408!1.28e-10!24;UBERON:0006562!3.83e-10!24;UBERON:0001557!3.83e-10!24;UBERON:0001042!3.83e-10!24;UBERON:0008814!3.83e-10!24;UBERON:0009145!3.83e-10!24;UBERON:0002370!6.43e-10!23;UBERON:0000974!6.43e-10!23;UBERON:0004807!6.43e-10!23;UBERON:0005058!6.43e-10!23;UBERON:0003351!6.43e-10!23;UBERON:0009113!6.43e-10!23;UBERON:0003295!6.43e-10!23;UBERON:0009722!6.43e-10!23;UBERON:0005562!6.43e-10!23;UBERON:0007690!6.43e-10!23;UBERON:0001004!7.55e-09!42;UBERON:0000065!2.84e-08!41;UBERON:0000072!3.00e-08!27;UBERON:0003081!3.84e-08!88;UBERON:0005057!7.23e-08!51;UBERON:0000063!7.63e-07!35;UBERON:0004119!9.60e-07!130;UBERON:0000925!9.60e-07!130;UBERON:0006595!9.60e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.37e-28,48;UBERON:0002405,4.37e-28,48;UBERON:0002390,4.46e-23,45;UBERON:0003061,4.46e-23,45;UBERON:0004177,3.08e-20,29;UBERON:0005057,3.08e-20,29;UBERON:0003408,1.58e-16,24;UBERON:0000077,5.17e-16,35;UBERON:0002370,4.89e-15,23;UBERON:0000974,4.89e-15,23;UBERON:0004807,4.89e-15,23;UBERON:0005058,4.89e-15,23;UBERON:0003351,4.89e-15,23;UBERON:0009113,4.89e-15,23;UBERON:0003295,4.89e-15,23;UBERON:0009722,4.89e-15,23;UBERON:0005562,4.89e-15,23;UBERON:0007690,4.89e-15,23;UBERON:0006562,2.81e-14,24;UBERON:0001557,2.81e-14,24;UBERON:0001042,2.81e-14,24;UBERON:0008814,2.81e-14,24;UBERON:0009145,2.81e-14,24;UBERON:0000072,2.45e-12,27;UBERON:0003081,3.61e-12,87;UBERON:0001004,3.92e-12,42;UBERON:0000065,5.16e-11,41;UBERON:0007811,7.11e-10,36;UBERON:0002384,1.69e-09,46;UBERON:0001041,6.31e-08,80;UBERON:0000153,9.88e-08,43;UBERON:0002465,1.28e-07,3;UBERON:0000926,4.18e-07,120;UBERON:0004120,4.18e-07,120;UBERON:0006603,4.18e-07,120 | |||
|phase1_expression=0,0,0.454999239389536,0.30246421130683,0,0,0.233612640595526,2.96983643915625,5.20918271961167,3.7450324211519,0.171217968225505,0.398860794976682,13.0112554747716,13.2879011676876,2.99798785634096,2.83465374345756,2.09868563438444,23.1864691538305,22.7609959785526,29.2828859740641,0.680346321208558,1.39007331681239,1.56719873483361,2.71987118748791,2.2940928106717,0.57423196411502,0.430761996159075,0,0,0,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0.683045484958446,1.94204141212461,0,0,0,0,0,0,0,0,0,47.3146949082817,31.9159342484992,72.9323544139147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,0.5709193985953,25.1169747137757,0.742210695324124,0,0.304465478312141,0,0,0.352766121407114,0.125666591329675,0,0.86759614151947,0.884610551949874,0.161766849947409,1.10420759230197,1.45462575940567,0,0.292780797011547,0.209446706813455,0.510914110417183,0.599075622529601,0.599902730993408,0.889491589511453,0,0,0,0,0,0,0,0,1.7416975885413,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0.324275238183423,0.146199987425332,0.219550115291051,0.402619256281115,0,0,0.330418782983798,1.58670339998127,0,0,0.128867461322093,0,0,0,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0.432276099749388,0.199141273254367,0,0,0,0,0,0,0,0.295220295959204,0,0,0,0,0,0,0,0.241177159752417,0.50925170356284,0,0,0.549122826376163,0,0.372140947668503,0,0.505157755894224,0,0.482443521363367,1.84753190166605,0,0,0,0,0,0,0,0.315270288212382,0.44292937929755,0.478364305972461,1.96635977658886,2.07221978239075,0.578596234326046,0,0,0.491764273019036,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,0.494910368917606,0,0,0,0,0,0,0,0,0.356497378384721,0.948110273807448,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0.8244312647074,0.161464426695906,0,0.119372344003136,0.656563598980245,0.582961673259701,0,5.46786818553129,0.206386867963223,0.555583582109135,3.39063222608444,4.10082683163076,3.43167259809784,0,0.279902904647316,0.138199973804424,0,0,0,0,0,0.436725127492355,0,0.247960367176008,0,0.388844919875379,1.86401793926078,0,0,0,0,0,0,0,0,0,0,0,2.52808896502543,0,0.205421914329655,0.389762468933385,0.716106782669926,1.78813219303138,1.20195449519969,1.03382669022204,1.11063094942962,1.143102099825,1.31074040677893,1.94915761479505,2.11666051608725,2.45441494581295,0.226730383615211,0,0.0897138566094757,0,0.19318959403219,0.187682475451182,0.915758121336325,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0.128050304809739,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0.382576664137687,0,0.695603506861264 | |||
|short_description=p@chr18:56629179..56629195,+ | |||
}} |
Revision as of 16:22, 13 September 2013
Short description: | p@chr18:56629179..56629195, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:56629179..56629195, + |
Coexpression cluster: | MCL_coexpression_mm9:1271 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 7.74e-21 | 25 |
lymphoid lineage restricted progenitor cell | 4.51e-18 | 12 |
lymphocyte | 1.65e-16 | 13 |
common lymphoid progenitor | 1.65e-16 | 13 |
T cell | 7.25e-16 | 11 |
pro-T cell | 7.25e-16 | 11 |
hematopoietic cell | 2.19e-15 | 32 |
hematopoietic oligopotent progenitor cell | 2.19e-15 | 32 |
hematopoietic stem cell | 2.19e-15 | 32 |
hematopoietic multipotent progenitor cell | 2.19e-15 | 32 |
megakaryocyte progenitor cell | 5.25e-14 | 6 |
megakaryocyte | 5.25e-14 | 6 |
mature alpha-beta T cell | 1.12e-12 | 9 |
alpha-beta T cell | 1.12e-12 | 9 |
immature T cell | 1.12e-12 | 9 |
mature T cell | 1.12e-12 | 9 |
immature alpha-beta T cell | 1.12e-12 | 9 |
leukocyte | 4.19e-12 | 17 |
nongranular leukocyte | 4.19e-12 | 17 |
CD4-positive, alpha-beta T cell | 1.58e-10 | 8 |
connective tissue cell | 1.69e-09 | 46 |
mesenchymal cell | 1.69e-09 | 46 |
megakaryocyte-erythroid progenitor cell | 4.64e-09 | 9 |
motile cell | 1.57e-07 | 54 |
CD9-positive, CD41-positive megakaryocyte cell | 2.35e-07 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 2.35e-07 | 3 |
Kit-positive megakaryocyte progenitor cell | 2.35e-07 | 3 |
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Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.