FFCP PHASE1:Mm9::chr7:133513065..133513092,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=16797|HGNC=|MCL_coexpression_id=118|UniProt=O54957|association_with_transcript=-8bp_to_ENSMUST00000032997_5end|description=CAGE_peak_1_at_Lat_5end|id=chr7:133513065..133513092,-|ontology_enrichment_celltype=CL:0000084!1.54e-08!11;CL:0000827!1.54e-08!11;CL:0000838!2.93e-08!12;CL:0000542!9.21e-08!13;CL:0000051!9.21e-08!13;CL:0000791!9.23e-08!9;CL:0000789!9.23e-08!9;CL:0002420!9.23e-08!9;CL:0002419!9.23e-08!9;CL:0000790!9.23e-08!9;CL:0000624!4.12e-07!8|ontology_enrichment_celltype_v019_2=CL:0000084,1.36e-10,11;CL:0000827,1.36e-10,11;CL:0000791,1.38e-09,9;CL:0000789,1.38e-09,9;CL:0002420,1.38e-09,9;CL:0002419,1.38e-09,9;CL:0000790,1.38e-09,9;CL:0000838,2.60e-09,12;CL:0000624,9.50e-09,8;CL:0000542,3.08e-08,13;CL:0000051,3.08e-08,13;CL:0000893,5.78e-07,6;CL:0002489,5.78e-07,6;CL:0000898,5.78e-07,6;CL:0000809,5.78e-07,6;CL:0000810,5.78e-07,6;CL:0000895,5.78e-07,6;CL:0000808,5.78e-07,6;CL:0000894,5.78e-07,6;CL:0000806,5.78e-07,6;CL:0000807,5.78e-07,6;CL:0000805,5.78e-07,6;CL:0002425,5.78e-07,6;CL:0002436,5.78e-07,6;CL:0002427,5.78e-07,6;CL:0002428,5.78e-07,6;CL:0002429,5.78e-07,6;CL:0002433,5.78e-07,6;CL:0002431,5.78e-07,6;CL:0002432,5.78e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.68e-13!48;UBERON:0004177!2.73e-13!29;UBERON:0002390!5.48e-13!45;UBERON:0003061!5.48e-13!45;UBERON:0003408!4.05e-11!24;UBERON:0002370!9.83e-11!23;UBERON:0000974!9.83e-11!23;UBERON:0004807!9.83e-11!23;UBERON:0005058!9.83e-11!23;UBERON:0003351!9.83e-11!23;UBERON:0009113!9.83e-11!23;UBERON:0003295!9.83e-11!23;UBERON:0009722!9.83e-11!23;UBERON:0005562!9.83e-11!23;UBERON:0007690!9.83e-11!23;UBERON:0002405!1.08e-10!70;UBERON:0003081!3.23e-10!88;UBERON:0006562!3.38e-10!24;UBERON:0001557!3.38e-10!24;UBERON:0001042!3.38e-10!24;UBERON:0008814!3.38e-10!24;UBERON:0009145!3.38e-10!24;UBERON:0001004!2.60e-09!42;UBERON:0005057!4.51e-09!51;UBERON:0000065!6.03e-09!41;UBERON:0000072!3.42e-08!27|ontology_enrichment_uberon_v019_2=UBERON:0004177,5.19e-18,29;UBERON:0005057,5.19e-18,29;UBERON:0002193,7.58e-17,48;UBERON:0002405,7.58e-17,48;UBERON:0002390,1.02e-16,45;UBERON:0003061,1.02e-16,45;UBERON:0003408,3.44e-15,24;UBERON:0002370,1.08e-14,23;UBERON:0000974,1.08e-14,23;UBERON:0004807,1.08e-14,23;UBERON:0005058,1.08e-14,23;UBERON:0003351,1.08e-14,23;UBERON:0009113,1.08e-14,23;UBERON:0003295,1.08e-14,23;UBERON:0009722,1.08e-14,23;UBERON:0005562,1.08e-14,23;UBERON:0007690,1.08e-14,23;UBERON:0006562,1.09e-13,24;UBERON:0001557,1.09e-13,24;UBERON:0001042,1.09e-13,24;UBERON:0008814,1.09e-13,24;UBERON:0009145,1.09e-13,24;UBERON:0000077,6.43e-13,35;UBERON:0000072,3.70e-11,27;UBERON:0001004,3.79e-11,42;UBERON:0000065,1.11e-10,41;UBERON:0003081,3.04e-10,87;UBERON:0001041,5.50e-09,80;UBERON:0005911,2.00e-07,69;UBERON:0007811,3.85e-07,36;UBERON:0002530,9.41e-07,65|phase1_expression=0,0,0,0,0,0,0,264.961059702114,739.563157462705,877.976038233798,309.390868583487,270.42761899419,276.489178838897,285.427613898026,2.6648780945253,4.656931149966,0.699561878128147,14.9844528545163,16.4537320326887,7.63901373236454,8.07911256435163,4.66667470644161,3.91799683708403,0.639969691173627,1.14704640533585,0.57423196411502,0,0,1.90023419456374,4.03248207615889,1.55211357458713,0,0,0,0,0.166234645358492,0,0,0,0,1.17646297606203,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0.838913030288682,348.899190307457,202.664560882906,0,0,0,0,0,0,0,0,1.3498495759221,4.94433181283487,7.8152812644071,0.299600110518405,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,1.8931548333296,0.604572480854284,0,0.860423876981386,0,0,0,0,4.91555470461132,0,0,0,0,0,0,0,0,0,0.505524445014783,6.39429726426736,40.1353719653116,1.7813056687779,1.21439728736295,0.304465478312141,0.230615497256059,0.150722640552623,0.23517741427141,0,0,1.44599356919912,20.3460426948471,0.485300549842228,1.98757366614354,2.90925151881133,0,0,0,4.08731288333746,2.99537811264801,1.79970819298022,1.77898317902291,0,0,0,0,0,0,0,0.509196819251581,3.73220911830279,4.0435641349388,0.210441855886474,0.910843100738926,0.229902104433473,0.180062129805349,0.150704817835715,0.0680364991513279,0,0,0,0.215567992932842,0.378212160335639,0.879755620819744,1.31517439456545,0.556094498451196,1.0447564995665,0.205782136407943,0.995171334092466,0,1.02939162845886,0.284163499395593,2.89976081549703,1.87620847984877,2.70093092191522,1.18372367792605,0.983821158737019,0.771335564436891,0.697601834251224,0.268273401399619,1.98501082024188,0,2.46251196118643,1.29710095273369,1.75439984910399,0.878200461164203,0.134206418760372,0,0.102904612379284,5.61711931072457,0.528901133327089,0.426576501070468,0.696710015581316,0.644337306610467,0.201683524623343,0,0.380451252225118,0,0,0.502670417600539,0.795825888164603,1.75467678407208,3.59527763461689,0,0.796565093017469,0.569003702859245,0.342745537829186,0,0,0.193952487167626,0.280543279561274,0.126473074248515,0,0.31399745568275,0,0.296452627087149,3.00321190288969,4.32429789249047,4.72210436008193,7.30296436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| ||
|EntrezGene=16797 | |||
|HGNC= | |||
|MCL_coexpression_id=118 | |||
|UniProt=O54957 | |||
|association_with_transcript=-8bp_to_ENSMUST00000032997_5end | |||
|description=CAGE_peak_1_at_Lat_5end | |||
|id=chr7:133513065..133513092,- | |||
|ontology_enrichment_celltype=CL:0000084!1.54e-08!11;CL:0000827!1.54e-08!11;CL:0000838!2.93e-08!12;CL:0000542!9.21e-08!13;CL:0000051!9.21e-08!13;CL:0000791!9.23e-08!9;CL:0000789!9.23e-08!9;CL:0002420!9.23e-08!9;CL:0002419!9.23e-08!9;CL:0000790!9.23e-08!9;CL:0000624!4.12e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.36e-10,11;CL:0000827,1.36e-10,11;CL:0000791,1.38e-09,9;CL:0000789,1.38e-09,9;CL:0002420,1.38e-09,9;CL:0002419,1.38e-09,9;CL:0000790,1.38e-09,9;CL:0000838,2.60e-09,12;CL:0000624,9.50e-09,8;CL:0000542,3.08e-08,13;CL:0000051,3.08e-08,13;CL:0000893,5.78e-07,6;CL:0002489,5.78e-07,6;CL:0000898,5.78e-07,6;CL:0000809,5.78e-07,6;CL:0000810,5.78e-07,6;CL:0000895,5.78e-07,6;CL:0000808,5.78e-07,6;CL:0000894,5.78e-07,6;CL:0000806,5.78e-07,6;CL:0000807,5.78e-07,6;CL:0000805,5.78e-07,6;CL:0002425,5.78e-07,6;CL:0002436,5.78e-07,6;CL:0002427,5.78e-07,6;CL:0002428,5.78e-07,6;CL:0002429,5.78e-07,6;CL:0002433,5.78e-07,6;CL:0002431,5.78e-07,6;CL:0002432,5.78e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.68e-13!48;UBERON:0004177!2.73e-13!29;UBERON:0002390!5.48e-13!45;UBERON:0003061!5.48e-13!45;UBERON:0003408!4.05e-11!24;UBERON:0002370!9.83e-11!23;UBERON:0000974!9.83e-11!23;UBERON:0004807!9.83e-11!23;UBERON:0005058!9.83e-11!23;UBERON:0003351!9.83e-11!23;UBERON:0009113!9.83e-11!23;UBERON:0003295!9.83e-11!23;UBERON:0009722!9.83e-11!23;UBERON:0005562!9.83e-11!23;UBERON:0007690!9.83e-11!23;UBERON:0002405!1.08e-10!70;UBERON:0003081!3.23e-10!88;UBERON:0006562!3.38e-10!24;UBERON:0001557!3.38e-10!24;UBERON:0001042!3.38e-10!24;UBERON:0008814!3.38e-10!24;UBERON:0009145!3.38e-10!24;UBERON:0001004!2.60e-09!42;UBERON:0005057!4.51e-09!51;UBERON:0000065!6.03e-09!41;UBERON:0000072!3.42e-08!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,5.19e-18,29;UBERON:0005057,5.19e-18,29;UBERON:0002193,7.58e-17,48;UBERON:0002405,7.58e-17,48;UBERON:0002390,1.02e-16,45;UBERON:0003061,1.02e-16,45;UBERON:0003408,3.44e-15,24;UBERON:0002370,1.08e-14,23;UBERON:0000974,1.08e-14,23;UBERON:0004807,1.08e-14,23;UBERON:0005058,1.08e-14,23;UBERON:0003351,1.08e-14,23;UBERON:0009113,1.08e-14,23;UBERON:0003295,1.08e-14,23;UBERON:0009722,1.08e-14,23;UBERON:0005562,1.08e-14,23;UBERON:0007690,1.08e-14,23;UBERON:0006562,1.09e-13,24;UBERON:0001557,1.09e-13,24;UBERON:0001042,1.09e-13,24;UBERON:0008814,1.09e-13,24;UBERON:0009145,1.09e-13,24;UBERON:0000077,6.43e-13,35;UBERON:0000072,3.70e-11,27;UBERON:0001004,3.79e-11,42;UBERON:0000065,1.11e-10,41;UBERON:0003081,3.04e-10,87;UBERON:0001041,5.50e-09,80;UBERON:0005911,2.00e-07,69;UBERON:0007811,3.85e-07,36;UBERON:0002530,9.41e-07,65 | |||
|phase1_expression=0,0,0,0,0,0,0,264.961059702114,739.563157462705,877.976038233798,309.390868583487,270.42761899419,276.489178838897,285.427613898026,2.6648780945253,4.656931149966,0.699561878128147,14.9844528545163,16.4537320326887,7.63901373236454,8.07911256435163,4.66667470644161,3.91799683708403,0.639969691173627,1.14704640533585,0.57423196411502,0,0,1.90023419456374,4.03248207615889,1.55211357458713,0,0,0,0,0.166234645358492,0,0,0,0,1.17646297606203,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0.838913030288682,348.899190307457,202.664560882906,0,0,0,0,0,0,0,0,1.3498495759221,4.94433181283487,7.8152812644071,0.299600110518405,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,1.8931548333296,0.604572480854284,0,0.860423876981386,0,0,0,0,4.91555470461132,0,0,0,0,0,0,0,0,0,0.505524445014783,6.39429726426736,40.1353719653116,1.7813056687779,1.21439728736295,0.304465478312141,0.230615497256059,0.150722640552623,0.23517741427141,0,0,1.44599356919912,20.3460426948471,0.485300549842228,1.98757366614354,2.90925151881133,0,0,0,4.08731288333746,2.99537811264801,1.79970819298022,1.77898317902291,0,0,0,0,0,0,0,0.509196819251581,3.73220911830279,4.0435641349388,0.210441855886474,0.910843100738926,0.229902104433473,0.180062129805349,0.150704817835715,0.0680364991513279,0,0,0,0.215567992932842,0.378212160335639,0.879755620819744,1.31517439456545,0.556094498451196,1.0447564995665,0.205782136407943,0.995171334092466,0,1.02939162845886,0.284163499395593,2.89976081549703,1.87620847984877,2.70093092191522,1.18372367792605,0.983821158737019,0.771335564436891,0.697601834251224,0.268273401399619,1.98501082024188,0,2.46251196118643,1.29710095273369,1.75439984910399,0.878200461164203,0.134206418760372,0,0.102904612379284,5.61711931072457,0.528901133327089,0.426576501070468,0.696710015581316,0.644337306610467,0.201683524623343,0,0.380451252225118,0,0,0.502670417600539,0.795825888164603,1.75467678407208,3.59527763461689,0,0.796565093017469,0.569003702859245,0.342745537829186,0,0,0.193952487167626,0.280543279561274,0.126473074248515,0,0.31399745568275,0,0.296452627087149,3.00321190288969,4.32429789249047,4.72210436008193,7.30296436998611,2.17059443777175,2.80088436959562,2.87696137450811,3.89124544260085,1.37280706594041,0,1.11642284300551,0.312037673114561,0,0,0,10.1614254591633,0.757965647081939,0.162964976442026,0.169745085775188,0.469380496577004,5.02518772325447,0,0.780534591431195,1.41871629695572,1.99318220683897,2.23236676120482,2.29408640602033,2.41758974612254,2.02508682014116,0,0.54390568381871,1.47529281905711,1.65562047782839,0.160550589987792,0.234423373184406,0,0.504941854408746,0,0,0,0.955875191810208,0.222798674082394,0.283076530788832,0,0.584511715822624,0,0,0.425820255624806,0.178065603667255,0.81443479676788,0.824850614862677,3.98235415019888,0,0.302323556964751,0,0,0,0.258428293168221,0.363533729477506,1.06949213515416,2.52829406348653,0,0,0.340439605753788,0.18006109403131,0.388076051348264,1.28602221018955,0.709360934569094,0.178368817602071,0.493647061806363,0,0.23467170806371,0,0.220528398054962,0.49465875882444,1.77610869365496,0.241251699712623,0.238744688006273,0.656563598980245,1.7488850197791,0,15.7201210334024,1.857481811669,1.85194527369712,5.65105371014073,9.56859594047176,9.83746144788047,8.83887835968048,7.97723278244851,9.39759821870082,0.954670618015114,0.632671987162271,0.203319467126849,0,0.418176592028937,0,0.134864346384821,0.41326727862668,0,0.259229946583586,3.10669656543463,0,1.04661582230785,1.15820943319968,0.388902376688095,0.258319646955462,0.506868376472335,0.352071715937262,0.651021924219751,0.734015410979976,0.724752362478018,0,294.83837554609,15.6098415773426,37.5922103223268,87.436713864056,119.231779314543,161.329260082387,167.312065731797,171.172161995335,161.849219266881,162.62532540177,189.351575686987,231.365008876172,195.502462213149,207.456501372285,0.226730383615211,0,0,0,0.772758376128762,0.93841237725591,0.36630324853453,0.643105137237198,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.31136204275253,1.59609949360412,1.70733605754134,0.972426868273176,0.628839487883947,0.551530525350042,2.22246727801615,1.85431551515005,0.64183841918363,2.02157769411038,3.29523089857312,1.88626341386076,1.31098110457835,1.28050304809739,1.43588672389033,0.476293691283074,1.50649623728312,2.50781986602817,0.824171801606613,1.91358596174717,3.08582327146874,1.77475806159337,1.66905332963125,1.88950341622027,1.2234219453993,1.77690676572521,1.82927972872773,1.05227884575137,1.22223702461276,2.24456908663095,2.25406534435931,1.57607171800902,2.04615521584845,1.23949472948773,2.70069255373598,1.24905288968973,3.74290573512653,3.00819475667618,1.53030665655075,1.32354851471709,0.927471342481686 | |||
|short_description=p1@Lat | |||
}} |
Revision as of 11:45, 14 September 2013
Short description: | p1@Lat |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Lat_5end |
Coexpression cluster: | MCL_coexpression_mm9:118 |
Association with transcript: | -8bp_to_ENSMUST00000032997_5end |
EntrezGene: | Lat |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 5.19e-18 | 29 |
immune organ | 5.19e-18 | 29 |
hemolymphoid system | 7.58e-17 | 48 |
immune system | 7.58e-17 | 48 |
hematopoietic system | 1.02e-16 | 45 |
blood island | 1.02e-16 | 45 |
gland of gut | 3.44e-15 | 24 |
thymus | 1.08e-14 | 23 |
neck | 1.08e-14 | 23 |
respiratory system epithelium | 1.08e-14 | 23 |
hemolymphoid system gland | 1.08e-14 | 23 |
pharyngeal epithelium | 1.08e-14 | 23 |
thymic region | 1.08e-14 | 23 |
pharyngeal gland | 1.08e-14 | 23 |
entire pharyngeal arch endoderm | 1.08e-14 | 23 |
thymus primordium | 1.08e-14 | 23 |
early pharyngeal endoderm | 1.08e-14 | 23 |
pharynx | 1.09e-13 | 24 |
upper respiratory tract | 1.09e-13 | 24 |
chordate pharynx | 1.09e-13 | 24 |
pharyngeal arch system | 1.09e-13 | 24 |
pharyngeal region of foregut | 1.09e-13 | 24 |
mixed endoderm/mesoderm-derived structure | 6.43e-13 | 35 |
segment of respiratory tract | 3.70e-11 | 27 |
respiratory system | 3.79e-11 | 42 |
respiratory tract | 1.11e-10 | 41 |
lateral plate mesoderm | 3.04e-10 | 87 |
foregut | 5.50e-09 | 80 |
endo-epithelium | 2.00e-07 | 69 |
craniocervical region | 3.85e-07 | 36 |
gland | 9.41e-07 | 65 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.