FFCP PHASE1:Mm9::chr7:29225965..29226037,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=63986|HGNC=|MCL_coexpression_id=3|UniProt=A7VJA4,Q9ERL7|association_with_transcript=9bp_to_NM_001039192,uc009fyy.1_5end|description=CAGE_peak_1_at_Gmfg_5end|id=chr7:29225965..29226037,+|ontology_enrichment_celltype=CL:0000988!3.79e-10!32;CL:0002032!3.79e-10!32;CL:0000037!3.79e-10!32;CL:0000566!3.79e-10!32;CL:0000837!3.79e-10!32;CL:0000738!2.35e-07!17;CL:0002087!2.35e-07!17;CL:0002031!3.60e-07!25|ontology_enrichment_celltype_v019_2=CL:0000988,1.98e-10,32;CL:0002032,1.98e-10,32;CL:0000037,1.98e-10,32;CL:0000837,1.98e-10,32;CL:0002031,2.07e-07,25;CL:0000738,2.11e-07,17;CL:0002087,2.11e-07,17|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!1.14e-18!70;UBERON:0002193!3.80e-18!48;UBERON:0002390!4.75e-17!45;UBERON:0003061!4.75e-17!45;UBERON:0000926!6.35e-12!193;UBERON:0004120!6.35e-12!193;UBERON:0006603!6.35e-12!193;UBERON:0005057!1.84e-10!51;UBERON:0001041!3.13e-10!92;UBERON:0003081!6.93e-10!88;UBERON:0004177!7.63e-10!29;UBERON:0000077!4.27e-09!97;UBERON:0003104!5.94e-09!131;UBERON:0009142!5.94e-09!131;UBERON:0002371!3.47e-08!16;UBERON:0000065!7.20e-08!41;UBERON:0001004!7.87e-08!42;UBERON:0001474!1.13e-07!22;UBERON:0004765!1.13e-07!22;UBERON:0001434!1.13e-07!22;UBERON:0002370!1.58e-07!23;UBERON:0000974!1.58e-07!23;UBERON:0004807!1.58e-07!23;UBERON:0005058!1.58e-07!23;UBERON:0003351!1.58e-07!23;UBERON:0009113!1.58e-07!23;UBERON:0003295!1.58e-07!23;UBERON:0009722!1.58e-07!23;UBERON:0005562!1.58e-07!23;UBERON:0007690!1.58e-07!23;UBERON:0003408!2.05e-07!24;UBERON:0002368!3.39e-07!60;UBERON:0006562!5.40e-07!24;UBERON:0001557!5.40e-07!24;UBERON:0001042!5.40e-07!24;UBERON:0008814!5.40e-07!24;UBERON:0009145!5.40e-07!24;UBERON:0000949!7.61e-07!72;UBERON:0002530!7.89e-07!65|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.59e-18,48;UBERON:0002405,1.59e-18,48;UBERON:0002390,2.03e-17,45;UBERON:0003061,2.03e-17,45;UBERON:0001041,5.99e-11,80;UBERON:0004177,3.95e-10,29;UBERON:0005057,3.95e-10,29;UBERON:0003081,8.73e-10,87;UBERON:0000065,3.00e-08,41;UBERON:0002371,3.06e-08,16;UBERON:0001004,3.31e-08,42;UBERON:0000926,3.87e-08,120;UBERON:0004120,3.87e-08,120;UBERON:0006603,3.87e-08,120;UBERON:0000077,4.08e-08,35;UBERON:0001474,8.53e-08,22;UBERON:0004765,8.53e-08,22;UBERON:0001434,8.53e-08,22;UBERON:0002370,8.72e-08,23;UBERON:0000974,8.72e-08,23;UBERON:0004807,8.72e-08,23;UBERON:0005058,8.72e-08,23;UBERON:0003351,8.72e-08,23;UBERON:0009113,8.72e-08,23;UBERON:0003295,8.72e-08,23;UBERON:0009722,8.72e-08,23;UBERON:0005562,8.72e-08,23;UBERON:0007690,8.72e-08,23;UBERON:0003408,1.15e-07,24;UBERON:0002368,2.40e-07,60;UBERON:0006562,3.11e-07,24;UBERON:0001557,3.11e-07,24;UBERON:0001042,3.11e-07,24;UBERON:0008814,3.11e-07,24;UBERON:0009145,3.11e-07,24;UBERON:0000949,5.56e-07,72;UBERON:0002530,5.72e-07,65|phase1_expression=1.60148847104794,0,0,0,0,0.16787927191189,0,97.8754791687148,77.8561633498717,77.2412936862578,14.5535272991679,7.25926646857561,216.055321173182,215.840973572505,19.3203661853084,34.0158449214908,18.1886088313318,142.431167659244,147.260901692563,135.80468857537,10.3752813984305,75.6597048150746,63.7327485499002,16.1592347021341,21.7938817013812,0.57423196411502,0,0.215471232685889,1.14014051673824,2.77233142735924,4.8780712344167,0,0,0,0,0,0,1259.78020851809,1328.27008569046,1506.70133515659,1349.40303354315,1299.15251239096,1281.74733200225,0,0,0,0,0,0,0,0,0,164.762519148697,139.269531266178,144.184239832117,0.514518872071894,1.43266719969378,1.54701627683233,0.202316460859598,0,1.90149421051854,0,0,66.1426292201828,34.6103226898441,51.1545682761192,17.6764065205859,11.1423308543251,0.933206510776299,0.810035629990144,0.630974884054146,2.28520787523043,3.09215957332259,0.734944795289724,0.287536413054709,0,0,0.893811366596314,0.46081959976873,0.791317726381163,0.182975287204819,0,0.558365998002762,0,1.68078072554491,1.76777151284201,1.28134512719193,1.1183966749518,2.95332153999418,0.151143120213571,25.218210517046,15.487629785665,0,0,3.24888208723835,0.896053774194671,15.5893306346245,0,0,0,0,0,0,0,0,0,0,12.3318590096585,56.7073965187306,8.01587550950054,6.59244241711316,7.00270600117925,7.14908041493781,9.49552635481522,6.82014501387088,4.14699751387929,1.97755974187499,7.22996784599558,61.0381280845413,11.3236794963186,34.6721183982818,40.7295212633587,1.86391761218122,0,0.209446706813455,7.66371165625774,274.736080492075,350.943097631143,304.714404521209,0,0,0.251308704225729,2.25971616249959,0.767146371990992,0.41557608911912,1.29793010454206,7.63795228877372,51.3800788619684,2.77995034277042,0.841767423545896,1.82168620147785,2.29902104433473,0.900310649026746,3.0140963567143,2.78949646520444,2.0498195245576,2.43624483855295,1.55222022443409,1.07783996466421,2.08016688184601,1.23165786914764,5.47989331068937,2.22437799380478,6.61679116392116,7.20237477427802,3.38358253591438,304.058310106631,262.752213164124,181.864639613179,1.86413195281952,3.75241695969754,3.78130329068131,3.55117103377815,3.34499193970586,3.85667782218446,2.32533944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| ||
|EntrezGene=63986 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|UniProt=A7VJA4,Q9ERL7 | |||
|association_with_transcript=9bp_to_NM_001039192,uc009fyy.1_5end | |||
|description=CAGE_peak_1_at_Gmfg_5end | |||
|id=chr7:29225965..29226037,+ | |||
|ontology_enrichment_celltype=CL:0000988!3.79e-10!32;CL:0002032!3.79e-10!32;CL:0000037!3.79e-10!32;CL:0000566!3.79e-10!32;CL:0000837!3.79e-10!32;CL:0000738!2.35e-07!17;CL:0002087!2.35e-07!17;CL:0002031!3.60e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.98e-10,32;CL:0002032,1.98e-10,32;CL:0000037,1.98e-10,32;CL:0000837,1.98e-10,32;CL:0002031,2.07e-07,25;CL:0000738,2.11e-07,17;CL:0002087,2.11e-07,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!1.14e-18!70;UBERON:0002193!3.80e-18!48;UBERON:0002390!4.75e-17!45;UBERON:0003061!4.75e-17!45;UBERON:0000926!6.35e-12!193;UBERON:0004120!6.35e-12!193;UBERON:0006603!6.35e-12!193;UBERON:0005057!1.84e-10!51;UBERON:0001041!3.13e-10!92;UBERON:0003081!6.93e-10!88;UBERON:0004177!7.63e-10!29;UBERON:0000077!4.27e-09!97;UBERON:0003104!5.94e-09!131;UBERON:0009142!5.94e-09!131;UBERON:0002371!3.47e-08!16;UBERON:0000065!7.20e-08!41;UBERON:0001004!7.87e-08!42;UBERON:0001474!1.13e-07!22;UBERON:0004765!1.13e-07!22;UBERON:0001434!1.13e-07!22;UBERON:0002370!1.58e-07!23;UBERON:0000974!1.58e-07!23;UBERON:0004807!1.58e-07!23;UBERON:0005058!1.58e-07!23;UBERON:0003351!1.58e-07!23;UBERON:0009113!1.58e-07!23;UBERON:0003295!1.58e-07!23;UBERON:0009722!1.58e-07!23;UBERON:0005562!1.58e-07!23;UBERON:0007690!1.58e-07!23;UBERON:0003408!2.05e-07!24;UBERON:0002368!3.39e-07!60;UBERON:0006562!5.40e-07!24;UBERON:0001557!5.40e-07!24;UBERON:0001042!5.40e-07!24;UBERON:0008814!5.40e-07!24;UBERON:0009145!5.40e-07!24;UBERON:0000949!7.61e-07!72;UBERON:0002530!7.89e-07!65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.59e-18,48;UBERON:0002405,1.59e-18,48;UBERON:0002390,2.03e-17,45;UBERON:0003061,2.03e-17,45;UBERON:0001041,5.99e-11,80;UBERON:0004177,3.95e-10,29;UBERON:0005057,3.95e-10,29;UBERON:0003081,8.73e-10,87;UBERON:0000065,3.00e-08,41;UBERON:0002371,3.06e-08,16;UBERON:0001004,3.31e-08,42;UBERON:0000926,3.87e-08,120;UBERON:0004120,3.87e-08,120;UBERON:0006603,3.87e-08,120;UBERON:0000077,4.08e-08,35;UBERON:0001474,8.53e-08,22;UBERON:0004765,8.53e-08,22;UBERON:0001434,8.53e-08,22;UBERON:0002370,8.72e-08,23;UBERON:0000974,8.72e-08,23;UBERON:0004807,8.72e-08,23;UBERON:0005058,8.72e-08,23;UBERON:0003351,8.72e-08,23;UBERON:0009113,8.72e-08,23;UBERON:0003295,8.72e-08,23;UBERON:0009722,8.72e-08,23;UBERON:0005562,8.72e-08,23;UBERON:0007690,8.72e-08,23;UBERON:0003408,1.15e-07,24;UBERON:0002368,2.40e-07,60;UBERON:0006562,3.11e-07,24;UBERON:0001557,3.11e-07,24;UBERON:0001042,3.11e-07,24;UBERON:0008814,3.11e-07,24;UBERON:0009145,3.11e-07,24;UBERON:0000949,5.56e-07,72;UBERON:0002530,5.72e-07,65 | |||
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| |||
|short_description=p1@Gmfg | |||
}} |
Revision as of 13:04, 14 September 2013
Short description: | p1@Gmfg |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gmfg_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 9bp_to_NM_001039192, uc009fyy.1_5end |
EntrezGene: | Gmfg |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.98e-10 | 32 |
hematopoietic oligopotent progenitor cell | 1.98e-10 | 32 |
hematopoietic stem cell | 1.98e-10 | 32 |
hematopoietic multipotent progenitor cell | 1.98e-10 | 32 |
hematopoietic lineage restricted progenitor cell | 2.07e-07 | 25 |
leukocyte | 2.11e-07 | 17 |
nongranular leukocyte | 2.11e-07 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.