FFCP PHASE1:Mm9::chr2:92299868..92299938,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=228368|HGNC=|UniProt=|association_with_transcript=-2bp_to_ENSMUST00000136718_5end|description=CAGE_peak_1_at_Slc35c1_5end|id=chr2:92299868..92299938,-|ontology_enrichment_celltype=CL:0000219!8.71e-13!54;CL:0002320!3.27e-12!46;CL:0000134!3.27e-12!46;CL:0000063!2.88e-08!66;CL:0002031!8.37e-08!25;CL:0000988!2.53e-07!32;CL:0002032!2.53e-07!32;CL:0000037!2.53e-07!32;CL:0000566!2.53e-07!32;CL:0000837!2.53e-07!32;CL:0000738!8.53e-07!17;CL:0002087!8.53e-07!17|ontology_enrichment_celltype_v019_2=CL:0000219,8.71e-13,54;CL:0002320,3.27e-12,46;CL:0000134,3.27e-12,46;CL:0002031,8.37e-08,25;CL:0000988,2.53e-07,32;CL:0002032,2.53e-07,32;CL:0000037,2.53e-07,32;CL:0000837,2.53e-07,32;CL:0000738,8.53e-07,17;CL:0002087,8.53e-07,17|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!4.02e-18!70;UBERON:0005057!1.98e-14!51;UBERON:0002384!3.27e-12!46;UBERON:0002193!5.54e-12!48;UBERON:0002390!1.09e-11!45;UBERON:0003061!1.09e-11!45;UBERON:0002530!1.33e-11!65;UBERON:0004119!6.83e-11!130;UBERON:0000925!6.83e-11!130;UBERON:0006595!6.83e-11!130;UBERON:0002368!8.62e-11!60;UBERON:0003929!9.57e-11!55;UBERON:0000949!1.06e-10!72;UBERON:0000077!2.71e-10!97;UBERON:0001007!3.49e-10!128;UBERON:0001555!3.49e-10!128;UBERON:0007026!3.49e-10!128;UBERON:0004921!3.78e-10!126;UBERON:0004185!3.78e-10!126;UBERON:0000072!5.27e-10!27;UBERON:0000490!5.34e-10!66;UBERON:0003408!7.64e-10!24;UBERON:0001041!1.82e-09!92;UBERON:0002370!2.30e-09!23;UBERON:0000974!2.30e-09!23;UBERON:0004807!2.30e-09!23;UBERON:0005058!2.30e-09!23;UBERON:0003351!2.30e-09!23;UBERON:0009113!2.30e-09!23;UBERON:0003295!2.30e-09!23;UBERON:0009722!2.30e-09!23;UBERON:0005562!2.30e-09!23;UBERON:0007690!2.30e-09!23;UBERON:0006562!4.02e-09!24;UBERON:0001557!4.02e-09!24;UBERON:0001042!4.02e-09!24;UBERON:0008814!4.02e-09!24;UBERON:0009145!4.02e-09!24;UBERON:0004177!8.23e-09!29;UBERON:0000063!7.54e-08!35;UBERON:0002365!1.38e-07!25;UBERON:0002330!1.38e-07!25;UBERON:0003104!4.22e-07!131;UBERON:0009142!4.22e-07!131;UBERON:0009854!6.13e-07!23;UBERON:0009856!6.13e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.27e-12,46;UBERON:0002193,5.54e-12,48;UBERON:0002405,5.54e-12,48;UBERON:0002390,1.09e-11,45;UBERON:0003061,1.09e-11,45;UBERON:0002530,1.33e-11,65;UBERON:0002368,8.62e-11,60;UBERON:0003929,9.57e-11,55;UBERON:0000949,1.06e-10,72;UBERON:0004119,2.23e-10,118;UBERON:0000925,2.23e-10,118;UBERON:0006595,2.23e-10,118;UBERON:0000072,5.27e-10,27;UBERON:0000490,5.34e-10,66;UBERON:0003408,7.64e-10,24;UBERON:0001007,1.10e-09,116;UBERON:0001555,1.10e-09,116;UBERON:0007026,1.10e-09,116;UBERON:0000077,1.14e-09,35;UBERON:0004921,1.16e-09,114;UBERON:0002370,2.30e-09,23;UBERON:0000974,2.30e-09,23;UBERON:0004807,2.30e-09,23;UBERON:0005058,2.30e-09,23;UBERON:0003351,2.30e-09,23;UBERON:0009113,2.30e-09,23;UBERON:0003295,2.30e-09,23;UBERON:0009722,2.30e-09,23;UBERON:0005562,2.30e-09,23;UBERON:0007690,2.30e-09,23;UBERON:0001041,3.23e-09,80;UBERON:0006562,4.02e-09,24;UBERON:0001557,4.02e-09,24;UBERON:0001042,4.02e-09,24;UBERON:0008814,4.02e-09,24;UBERON:0009145,4.02e-09,24;UBERON:0004177,8.23e-09,29;UBERON:0005057,8.23e-09,29;UBERON:0002365,1.38e-07,25;UBERON:0002330,1.38e-07,25;UBERON:0009854,6.13e-07,23;UBERON:0009856,6.13e-07,23|phase1_expression=8.64803774365887,4.18770489167233,4.54999239389536,4.83942738090928,7.01254021924886,10.7442734023609,8.87728034262997,18.593758575587,24.49723765439,28.3218076849612,25.6826952338257,28.3988886023398,22.427295620988,23.5160882507103,12.3250611871795,9.92128810210147,13.2916756844348,13.7226041930833,15.219702130237,8.48779303596061,12.7564935226605,30.9787767746762,15.9331871374751,14.8792953197868,10.3234176480227,4.59385571292016,11.1998119001359,7.75696437669201,6.84084310042946,9.32511480111744,12.1951780860418,36.196748387199,31.3683041668131,31.6963362030877,15.5979874665688,18.6182802801511,15.3127017196777,12.5559489221072,10.1573594788094,8.89990364755457,2.35292595212406,10.2456822743767,3.88408282424923,14.8558245211181,15.5106704765857,12.2976323948327,44.5963066278382,10.4652075062614,11.643367684927,10.304784650937,14.278615005787,23.0004102983955,5.87239121202077,19.5847778343063,20.8378155468328,15.9500850342287,21.4900079954068,17.532851137433,9.71119012126069,9.52183762689659,13.9442908771359,28.124096161738,30.2360230677787,50.844334026399,78.120442642791,53.2860086209575,29.0612107202853,30.7374644257244,7.15458324928496,10.6654691282036,8.41299845405528,8.85518051651791,12.8103753751936,8.08439274818697,7.76348315247715,12.8690630125403,14.3150645299205,8.42736431362239,7.21950706304344,11.4741070325269,6.31264740856627,9.37644067002168,10.3297709630511,6.19038871034848,7.02871939773326,7.66034322231536,10.3931326983345,7.64237727883732,15.22096485997,13.9051670596485,17.102004833399,12.0459342777394,50.3178786943735,18.3499085156858,35.0879265421741,33.1539896452028,14.0444420131752,19.7699174190547,10.3914401841148,12.0135455333516,7.04217098883402,15.3991772897181,17.83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| ||
|EntrezGene=228368 | |||
|HGNC= | |||
|UniProt= | |||
|association_with_transcript=-2bp_to_ENSMUST00000136718_5end | |||
|description=CAGE_peak_1_at_Slc35c1_5end | |||
|id=chr2:92299868..92299938,- | |||
|ontology_enrichment_celltype=CL:0000219!8.71e-13!54;CL:0002320!3.27e-12!46;CL:0000134!3.27e-12!46;CL:0000063!2.88e-08!66;CL:0002031!8.37e-08!25;CL:0000988!2.53e-07!32;CL:0002032!2.53e-07!32;CL:0000037!2.53e-07!32;CL:0000566!2.53e-07!32;CL:0000837!2.53e-07!32;CL:0000738!8.53e-07!17;CL:0002087!8.53e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,8.71e-13,54;CL:0002320,3.27e-12,46;CL:0000134,3.27e-12,46;CL:0002031,8.37e-08,25;CL:0000988,2.53e-07,32;CL:0002032,2.53e-07,32;CL:0000037,2.53e-07,32;CL:0000837,2.53e-07,32;CL:0000738,8.53e-07,17;CL:0002087,8.53e-07,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!4.02e-18!70;UBERON:0005057!1.98e-14!51;UBERON:0002384!3.27e-12!46;UBERON:0002193!5.54e-12!48;UBERON:0002390!1.09e-11!45;UBERON:0003061!1.09e-11!45;UBERON:0002530!1.33e-11!65;UBERON:0004119!6.83e-11!130;UBERON:0000925!6.83e-11!130;UBERON:0006595!6.83e-11!130;UBERON:0002368!8.62e-11!60;UBERON:0003929!9.57e-11!55;UBERON:0000949!1.06e-10!72;UBERON:0000077!2.71e-10!97;UBERON:0001007!3.49e-10!128;UBERON:0001555!3.49e-10!128;UBERON:0007026!3.49e-10!128;UBERON:0004921!3.78e-10!126;UBERON:0004185!3.78e-10!126;UBERON:0000072!5.27e-10!27;UBERON:0000490!5.34e-10!66;UBERON:0003408!7.64e-10!24;UBERON:0001041!1.82e-09!92;UBERON:0002370!2.30e-09!23;UBERON:0000974!2.30e-09!23;UBERON:0004807!2.30e-09!23;UBERON:0005058!2.30e-09!23;UBERON:0003351!2.30e-09!23;UBERON:0009113!2.30e-09!23;UBERON:0003295!2.30e-09!23;UBERON:0009722!2.30e-09!23;UBERON:0005562!2.30e-09!23;UBERON:0007690!2.30e-09!23;UBERON:0006562!4.02e-09!24;UBERON:0001557!4.02e-09!24;UBERON:0001042!4.02e-09!24;UBERON:0008814!4.02e-09!24;UBERON:0009145!4.02e-09!24;UBERON:0004177!8.23e-09!29;UBERON:0000063!7.54e-08!35;UBERON:0002365!1.38e-07!25;UBERON:0002330!1.38e-07!25;UBERON:0003104!4.22e-07!131;UBERON:0009142!4.22e-07!131;UBERON:0009854!6.13e-07!23;UBERON:0009856!6.13e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.27e-12,46;UBERON:0002193,5.54e-12,48;UBERON:0002405,5.54e-12,48;UBERON:0002390,1.09e-11,45;UBERON:0003061,1.09e-11,45;UBERON:0002530,1.33e-11,65;UBERON:0002368,8.62e-11,60;UBERON:0003929,9.57e-11,55;UBERON:0000949,1.06e-10,72;UBERON:0004119,2.23e-10,118;UBERON:0000925,2.23e-10,118;UBERON:0006595,2.23e-10,118;UBERON:0000072,5.27e-10,27;UBERON:0000490,5.34e-10,66;UBERON:0003408,7.64e-10,24;UBERON:0001007,1.10e-09,116;UBERON:0001555,1.10e-09,116;UBERON:0007026,1.10e-09,116;UBERON:0000077,1.14e-09,35;UBERON:0004921,1.16e-09,114;UBERON:0002370,2.30e-09,23;UBERON:0000974,2.30e-09,23;UBERON:0004807,2.30e-09,23;UBERON:0005058,2.30e-09,23;UBERON:0003351,2.30e-09,23;UBERON:0009113,2.30e-09,23;UBERON:0003295,2.30e-09,23;UBERON:0009722,2.30e-09,23;UBERON:0005562,2.30e-09,23;UBERON:0007690,2.30e-09,23;UBERON:0001041,3.23e-09,80;UBERON:0006562,4.02e-09,24;UBERON:0001557,4.02e-09,24;UBERON:0001042,4.02e-09,24;UBERON:0008814,4.02e-09,24;UBERON:0009145,4.02e-09,24;UBERON:0004177,8.23e-09,29;UBERON:0005057,8.23e-09,29;UBERON:0002365,1.38e-07,25;UBERON:0002330,1.38e-07,25;UBERON:0009854,6.13e-07,23;UBERON:0009856,6.13e-07,23 | |||
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| |||
|short_description=p1@Slc35c1 | |||
}} |
Revision as of 00:54, 14 September 2013
Short description: | p1@Slc35c1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Slc35c1_5end |
Coexpression cluster: | NA |
Association with transcript: | -2bp_to_ENSMUST00000136718_5end |
EntrezGene: | Slc35c1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 8.71e-13 | 54 |
connective tissue cell | 3.27e-12 | 46 |
mesenchymal cell | 3.27e-12 | 46 |
hematopoietic lineage restricted progenitor cell | 8.37e-08 | 25 |
hematopoietic cell | 2.53e-07 | 32 |
hematopoietic oligopotent progenitor cell | 2.53e-07 | 32 |
hematopoietic stem cell | 2.53e-07 | 32 |
hematopoietic multipotent progenitor cell | 2.53e-07 | 32 |
leukocyte | 8.53e-07 | 17 |
nongranular leukocyte | 8.53e-07 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.