FFCP PHASE1:Mm9::chr3:142545404..142545421,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=109333|HGNC=|MCL_coexpression_id=33|UniProt=Q8BWW9,Q8BVK4|association_with_transcript=-436bp_to_ENSMUST00000043812,NM_178654,uc008rpe.2,uc008rpf.2,uc008rpg.2_5end|description=CAGE_peak_4_at_Pkn2_5end|id=chr3:142545404..142545421,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000624,2.46e-20,8;CL:0000791,5.59e-18,9;CL:0000789,5.59e-18,9;CL:0002420,5.59e-18,9;CL:0002419,5.59e-18,9;CL:0000790,5.59e-18,9;CL:0000084,1.51e-14,11;CL:0000827,1.51e-14,11;CL:0000893,6.00e-14,6;CL:0002489,6.00e-14,6;CL:0000898,6.00e-14,6;CL:0000809,6.00e-14,6;CL:0000810,6.00e-14,6;CL:0000895,6.00e-14,6;CL:0000808,6.00e-14,6;CL:0000894,6.00e-14,6;CL:0000806,6.00e-14,6;CL:0000807,6.00e-14,6;CL:0000805,6.00e-14,6;CL:0002425,6.00e-14,6;CL:0002436,6.00e-14,6;CL:0002427,6.00e-14,6;CL:0002428,6.00e-14,6;CL:0002429,6.00e-14,6;CL:0002433,6.00e-14,6;CL:0002431,6.00e-14,6;CL:0002432,6.00e-14,6;CL:0000838,2.93e-13,12;CL:0000542,3.60e-12,13;CL:0000051,3.60e-12,13;CL:0000738,1.29e-11,17;CL:0002087,1.29e-11,17;CL:0002031,1.92e-09,25;CL:0000988,4.65e-07,32;CL:0002032,4.65e-07,32;CL:0000037,4.65e-07,32;CL:0000837,4.65e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!5.02e-13!29;UBERON:0003408!2.13e-11!24;UBERON:0002370!4.85e-11!23;UBERON:0000974!4.85e-11!23;UBERON:0004807!4.85e-11!23;UBERON:0005058!4.85e-11!23;UBERON:0003351!4.85e-11!23;UBERON:0009113!4.85e-11!23;UBERON:0003295!4.85e-11!23;UBERON:0009722!4.85e-11!23;UBERON:0005562!4.85e-11!23;UBERON:0007690!4.85e-11!23;UBERON:0006562!1.24e-10!24;UBERON:0001557!1.24e-10!24;UBERON:0001042!1.24e-10!24;UBERON:0008814!1.24e-10!24;UBERON:0009145!1.24e-10!24;UBERON:0002390!2.61e-08!45;UBERON:0003061!2.61e-08!45;UBERON:0005057!5.44e-08!51;UBERON:0000072!5.76e-08!27;UBERON:0003081!7.41e-08!88;UBERON:0002193!1.08e-07!48;UBERON:0001004!3.72e-07!42;UBERON:0000065!7.70e-07!41|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.65e-40,23;UBERON:0000974,5.65e-40,23;UBERON:0004807,5.65e-40,23;UBERON:0005058,5.65e-40,23;UBERON:0003351,5.65e-40,23;UBERON:0009113,5.65e-40,23;UBERON:0003295,5.65e-40,23;UBERON:0009722,5.65e-40,23;UBERON:0005562,5.65e-40,23;UBERON:0007690,5.65e-40,23;UBERON:0006562,3.60e-38,24;UBERON:0003408,3.60e-38,24;UBERON:0001557,3.60e-38,24;UBERON:0001042,3.60e-38,24;UBERON:0008814,3.60e-38,24;UBERON:0009145,3.60e-38,24;UBERON:0000072,1.48e-33,27;UBERON:0004177,5.21e-31,29;UBERON:0005057,5.21e-31,29;UBERON:0000077,4.11e-25,35;UBERON:0007811,2.54e-24,36;UBERON:0002193,5.89e-22,48;UBERON:0002405,5.89e-22,48;UBERON:0002390,4.24e-21,45;UBERON:0003061,4.24e-21,45;UBERON:0000065,6.13e-21,41;UBERON:0001004,2.33e-20,42;UBERON:0000153,8.32e-20,43;UBERON:0003929,9.76e-15,55;UBERON:0000490,3.13e-13,66;UBERON:0002368,3.19e-13,60;UBERON:0002530,6.10e-12,65;UBERON:0003081,8.06e-12,87;UBERON:0005911,4.75e-11,69;UBERON:0000949,1.91e-10,72;UBERON:0001041,4.64e-09,80;UBERON:0000926,1.97e-08,120;UBERON:0004120,1.97e-08,120;UBERON:0006603,1.97e-08,120|phase1_expression=0.320297694209588,0.348975407639361,0,0,0,0.33575854382378,0.934450562382103,2.1950964985068,1.12630977721333,1.40438715793196,0.513653904676515,1.7549874978974,2.22560948910567,2.79745287740792,0,0,0,0.946386496074713,0.411343300817216,0.84877930359606,0.17008658030214,0.198581902401771,0,0,0,0,0.430761996159075,0.215471232685889,0,0.504060259519861,0.443461021310609,1.27006134691926,0,0,0.288851619751275,0.166234645358492,0.816677425049476,0,0,1.0470474879476,0,0.683045484958446,0.485510353031154,0,0.202753862439029,0,0,0,0,0.194429899074283,0.139986421625363,0,0.335565212115473,2.90144856804538,0.336093799142464,0,0.286533439938757,0.515672092277442,0.202316460859598,0,0,0,0,0,0.988866362566974,0,0.299600110518405,0,0.311068836925433,0.135005938331691,0.420649922702764,0,0,0.122490799214954,0.287536413054709,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0,0,0.294628585473668,0.284743361598206,0.186399445825301,0.075726193333184,0.755715601067855,0,0,0,0,0,0,0.421333260395256,0.340860645156116,0.259786004602869,0.35333957451034,0.563373679106722,1.28326477414318,0,0,0,0,0,0.11418387971906,1.29468941823586,0.593768556259299,0,0.608930956624282,0.230615497256059,0.452167921657868,0.352766121407114,0.251333182659351,0,0.289198713839823,0,0.161766849947409,0.441683036920787,1.93950101254089,0,0.292780797011547,0.209446706813455,0.255457055208591,0.599075622529601,0.599902730993408,0.127070227073065,0.149790639404823,0,0.251308704225729,0,0,0,0.324482526135515,0.407357455401265,0.124406970610093,0,0.420883711772948,0.520481771850815,0.229902104433473,0,0.90422890701429,0.476255494059295,0.2562274405697,0.281105173679186,0,0.431135985865684,0.189106080167819,0.175951124163949,0.219195732427575,0.834141747676794,0.348252166522167,0,0.59710280045548,0,0.51469581422943,0,0.414251545071004,1.40715635988658,0.36012412292203,0.710234206755631,0.590292695242212,0.771335564436891,0.697601834251224,0.536546802799238,0.350296027101508,0.493679549740441,0.492502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| ||
|EntrezGene=109333 | |||
|HGNC= | |||
|MCL_coexpression_id=33 | |||
|UniProt=Q8BWW9,Q8BVK4 | |||
|association_with_transcript=-436bp_to_ENSMUST00000043812,NM_178654,uc008rpe.2,uc008rpf.2,uc008rpg.2_5end | |||
|description=CAGE_peak_4_at_Pkn2_5end | |||
|id=chr3:142545404..142545421,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,2.46e-20,8;CL:0000791,5.59e-18,9;CL:0000789,5.59e-18,9;CL:0002420,5.59e-18,9;CL:0002419,5.59e-18,9;CL:0000790,5.59e-18,9;CL:0000084,1.51e-14,11;CL:0000827,1.51e-14,11;CL:0000893,6.00e-14,6;CL:0002489,6.00e-14,6;CL:0000898,6.00e-14,6;CL:0000809,6.00e-14,6;CL:0000810,6.00e-14,6;CL:0000895,6.00e-14,6;CL:0000808,6.00e-14,6;CL:0000894,6.00e-14,6;CL:0000806,6.00e-14,6;CL:0000807,6.00e-14,6;CL:0000805,6.00e-14,6;CL:0002425,6.00e-14,6;CL:0002436,6.00e-14,6;CL:0002427,6.00e-14,6;CL:0002428,6.00e-14,6;CL:0002429,6.00e-14,6;CL:0002433,6.00e-14,6;CL:0002431,6.00e-14,6;CL:0002432,6.00e-14,6;CL:0000838,2.93e-13,12;CL:0000542,3.60e-12,13;CL:0000051,3.60e-12,13;CL:0000738,1.29e-11,17;CL:0002087,1.29e-11,17;CL:0002031,1.92e-09,25;CL:0000988,4.65e-07,32;CL:0002032,4.65e-07,32;CL:0000037,4.65e-07,32;CL:0000837,4.65e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!5.02e-13!29;UBERON:0003408!2.13e-11!24;UBERON:0002370!4.85e-11!23;UBERON:0000974!4.85e-11!23;UBERON:0004807!4.85e-11!23;UBERON:0005058!4.85e-11!23;UBERON:0003351!4.85e-11!23;UBERON:0009113!4.85e-11!23;UBERON:0003295!4.85e-11!23;UBERON:0009722!4.85e-11!23;UBERON:0005562!4.85e-11!23;UBERON:0007690!4.85e-11!23;UBERON:0006562!1.24e-10!24;UBERON:0001557!1.24e-10!24;UBERON:0001042!1.24e-10!24;UBERON:0008814!1.24e-10!24;UBERON:0009145!1.24e-10!24;UBERON:0002390!2.61e-08!45;UBERON:0003061!2.61e-08!45;UBERON:0005057!5.44e-08!51;UBERON:0000072!5.76e-08!27;UBERON:0003081!7.41e-08!88;UBERON:0002193!1.08e-07!48;UBERON:0001004!3.72e-07!42;UBERON:0000065!7.70e-07!41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.65e-40,23;UBERON:0000974,5.65e-40,23;UBERON:0004807,5.65e-40,23;UBERON:0005058,5.65e-40,23;UBERON:0003351,5.65e-40,23;UBERON:0009113,5.65e-40,23;UBERON:0003295,5.65e-40,23;UBERON:0009722,5.65e-40,23;UBERON:0005562,5.65e-40,23;UBERON:0007690,5.65e-40,23;UBERON:0006562,3.60e-38,24;UBERON:0003408,3.60e-38,24;UBERON:0001557,3.60e-38,24;UBERON:0001042,3.60e-38,24;UBERON:0008814,3.60e-38,24;UBERON:0009145,3.60e-38,24;UBERON:0000072,1.48e-33,27;UBERON:0004177,5.21e-31,29;UBERON:0005057,5.21e-31,29;UBERON:0000077,4.11e-25,35;UBERON:0007811,2.54e-24,36;UBERON:0002193,5.89e-22,48;UBERON:0002405,5.89e-22,48;UBERON:0002390,4.24e-21,45;UBERON:0003061,4.24e-21,45;UBERON:0000065,6.13e-21,41;UBERON:0001004,2.33e-20,42;UBERON:0000153,8.32e-20,43;UBERON:0003929,9.76e-15,55;UBERON:0000490,3.13e-13,66;UBERON:0002368,3.19e-13,60;UBERON:0002530,6.10e-12,65;UBERON:0003081,8.06e-12,87;UBERON:0005911,4.75e-11,69;UBERON:0000949,1.91e-10,72;UBERON:0001041,4.64e-09,80;UBERON:0000926,1.97e-08,120;UBERON:0004120,1.97e-08,120;UBERON:0006603,1.97e-08,120 | |||
|phase1_expression=0.320297694209588,0.348975407639361,0,0,0,0.33575854382378,0.934450562382103,2.1950964985068,1.12630977721333,1.40438715793196,0.513653904676515,1.7549874978974,2.22560948910567,2.79745287740792,0,0,0,0.946386496074713,0.411343300817216,0.84877930359606,0.17008658030214,0.198581902401771,0,0,0,0,0.430761996159075,0.215471232685889,0,0.504060259519861,0.443461021310609,1.27006134691926,0,0,0.288851619751275,0.166234645358492,0.816677425049476,0,0,1.0470474879476,0,0.683045484958446,0.485510353031154,0,0.202753862439029,0,0,0,0,0.194429899074283,0.139986421625363,0,0.335565212115473,2.90144856804538,0.336093799142464,0,0.286533439938757,0.515672092277442,0.202316460859598,0,0,0,0,0,0.988866362566974,0,0.299600110518405,0,0.311068836925433,0.135005938331691,0.420649922702764,0,0,0.122490799214954,0.287536413054709,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0,0,0.294628585473668,0.284743361598206,0.186399445825301,0.075726193333184,0.755715601067855,0,0,0,0,0,0,0.421333260395256,0.340860645156116,0.259786004602869,0.35333957451034,0.563373679106722,1.28326477414318,0,0,0,0,0,0.11418387971906,1.29468941823586,0.593768556259299,0,0.608930956624282,0.230615497256059,0.452167921657868,0.352766121407114,0.251333182659351,0,0.289198713839823,0,0.161766849947409,0.441683036920787,1.93950101254089,0,0.292780797011547,0.209446706813455,0.255457055208591,0.599075622529601,0.599902730993408,0.127070227073065,0.149790639404823,0,0.251308704225729,0,0,0,0.324482526135515,0.407357455401265,0.124406970610093,0,0.420883711772948,0.520481771850815,0.229902104433473,0,0.90422890701429,0.476255494059295,0.2562274405697,0.281105173679186,0,0.431135985865684,0.189106080167819,0.175951124163949,0.219195732427575,0.834141747676794,0.348252166522167,0,0.59710280045548,0,0.51469581422943,0,0.414251545071004,1.40715635988658,0.36012412292203,0.710234206755631,0.590292695242212,0.771335564436891,0.697601834251224,0.536546802799238,0.350296027101508,0.493679549740441,0.492502392237286,0.162137619091711,0.292399974850665,0.219550115291051,0.536825675041487,0.420579897128254,0,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0.605050573870028,0.889512175379481,0.380451252225118,0,0.164698954724011,0,0.397912944082302,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0,0.571242563048644,0,0.407302655690628,0,0.140271639780637,0.632365371242573,0.295220295959204,0.156998727841375,0,0,0.667380422864376,0.589676985339609,0.674586337154561,0.811440485554012,0.482354319504834,0.50925170356284,0.575392274901621,0.486405680325106,0.549122826376163,0,0,0.936113019343682,0.252578877947112,0,0,0.369506380333209,0.189491411770485,0.814824882210129,0.678980343100753,0,0,0,0.390267295715598,0.315270288212382,0.664394068946325,0.159454768657487,0.491589944147214,0.345369963731791,0.289298117163023,0,1.08781136763742,0,0,0.321101179975584,0.117211686592203,0,0.252470927204373,0.315508219416257,0.390438744296638,0,0.955875191810208,0.222798674082394,1.13230612315533,0,0,1.18586333383957,0.321321316421807,0.141940085208269,0,0.488660878060728,0.494910368917606,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0.680879211507576,0.36012218806262,0,0.214337035031592,0.709360934569094,0.535106452806212,0.329098041204242,0,0.23467170806371,0,0,0.32977250588296,0,0.361877549568935,0,0.492422699235184,0.291480836629851,0,0.512612642393558,0.412773735926445,0.925972636848558,0.565105371014073,0.683471138605126,0.915112692826091,0.849892149969277,0.419854356970974,0.138199973804424,0,0.158167996790568,0.203319467126849,0.540026704109006,0,0.436725127492355,0.269728692769641,0.247960367176008,0.26175594198403,0,0.621339313086926,0,0.598066184175915,0.827292452285488,0.194451188344048,0.516639293910924,0.506868376472335,0.58678619322877,0.13020438484395,0.314578033277133,0.241584120826006,0,1.26404448251271,0.608175645870493,0.410843828659309,0.77952493786677,1.9692936523423,2.98022032171897,1.56254084375959,2.21534290761866,2.72609414859999,2.13379058634,1.91569751759997,2.43644701849381,2.21287235772758,2.57129184799452,0.226730383615211,0,0.179427713218951,0.671538465456314,0.19318959403219,0.375364950902364,0.36630324853453,0.214368379079066,0.501572104035363,0,0,0,0,0.685082519770642,0,0,0,0,0,0.31136204275253,0,0.341467211508268,0.243106717068294,0.419226325255965,0.367687016900028,0,0.412070114477788,0,0.505394423527595,0.50695859978048,0.188626341386076,0,0.256100609619477,0.34461281373368,0,0.463537303779422,0.578727661391115,0,0,0.685738504770831,0.177475806159338,0.238436189947321,0.726732083161643,0.376437521661322,0.423073039458382,0.182927972872773,0.263069711437843,0.271608227691724,0,0.830445126869219,0.492522411877817,0,0,0.192906610981141,0.249810577937946,0.467863216890817,0,0,0,0 | |||
|short_description=p4@Pkn2 | |||
}} |
Revision as of 01:43, 14 September 2013
Short description: | p4@Pkn2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Pkn2_5end |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | -436bp_to_ENSMUST00000043812, NM_178654, uc008rpe.2, uc008rpf.2, uc008rpg.2_5end |
EntrezGene: | Pkn2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.