FFCP PHASE1:Mm9::chrX:34683959..34683976,+: Difference between revisions
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|id=chrX:34683959..34683976,+ | |id=chrX:34683959..34683976,+ | ||
|ontology_enrichment_celltype=CL:0000063!1.75e-07!66;CL:0000838!1.87e-07!12;CL:0000084!9.11e-07!11;CL:0000827!9.11e-07!11 | |ontology_enrichment_celltype=CL:0000063!1.75e-07!66;CL:0000838!1.87e-07!12;CL:0000084!9.11e-07!11;CL:0000827!9.11e-07!11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,9.02e-09,32;CL:0002032,9.02e-09,32;CL:0000037,9.02e-09,32;CL:0000837,9.02e-09,32;CL:0000838,1.50e-08,12;CL:0002031,8.37e-08,25;CL:0000084,9.77e-08,11;CL:0000827,9.77e-08,11;CL:0000542,1.76e-07,13;CL:0000051,1.76e-07,13;CL:0000791,2.46e-07,9;CL:0000789,2.46e-07,9;CL:0002420,2.46e-07,9;CL:0002419,2.46e-07,9;CL:0000790,2.46e-07,9;CL:0000738,3.95e-07,17;CL:0002087,3.95e-07,17 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.62e-18!130;UBERON:0000925!2.62e-18!130;UBERON:0006595!2.62e-18!130;UBERON:0001007!3.64e-18!128;UBERON:0001555!3.64e-18!128;UBERON:0007026!3.64e-18!128;UBERON:0004921!5.89e-17!126;UBERON:0004185!5.89e-17!126;UBERON:0002405!2.47e-11!70;UBERON:0003929!8.28e-11!55;UBERON:0000490!3.68e-10!66;UBERON:0005911!3.88e-10!69;UBERON:0004923!5.15e-10!24;UBERON:0005057!1.38e-08!51;UBERON:0000344!1.55e-08!15;UBERON:0002193!3.00e-08!48;UBERON:0005409!6.45e-08!59;UBERON:0000160!8.52e-08!43;UBERON:0000077!2.00e-07!97;UBERON:0001242!2.97e-07!13;UBERON:0000060!2.97e-07!13;UBERON:0001262!2.97e-07!13;UBERON:0004786!2.97e-07!13;UBERON:0003104!5.35e-07!131;UBERON:0009142!5.35e-07!131;UBERON:0001041!7.12e-07!92;UBERON:0002390!9.09e-07!45;UBERON:0003061!9.09e-07!45 | |ontology_enrichment_uberon=UBERON:0004119!2.62e-18!130;UBERON:0000925!2.62e-18!130;UBERON:0006595!2.62e-18!130;UBERON:0001007!3.64e-18!128;UBERON:0001555!3.64e-18!128;UBERON:0007026!3.64e-18!128;UBERON:0004921!5.89e-17!126;UBERON:0004185!5.89e-17!126;UBERON:0002405!2.47e-11!70;UBERON:0003929!8.28e-11!55;UBERON:0000490!3.68e-10!66;UBERON:0005911!3.88e-10!69;UBERON:0004923!5.15e-10!24;UBERON:0005057!1.38e-08!51;UBERON:0000344!1.55e-08!15;UBERON:0002193!3.00e-08!48;UBERON:0005409!6.45e-08!59;UBERON:0000160!8.52e-08!43;UBERON:0000077!2.00e-07!97;UBERON:0001242!2.97e-07!13;UBERON:0000060!2.97e-07!13;UBERON:0001262!2.97e-07!13;UBERON:0004786!2.97e-07!13;UBERON:0003104!5.35e-07!131;UBERON:0009142!5.35e-07!131;UBERON:0001041!7.12e-07!92;UBERON:0002390!9.09e-07!45;UBERON:0003061!9.09e-07!45 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.37e-22,118;UBERON:0000925,2.37e-22,118;UBERON:0006595,2.37e-22,118;UBERON:0001007,3.27e-22,116;UBERON:0001555,3.27e-22,116;UBERON:0007026,3.27e-22,116;UBERON:0004921,9.70e-21,114;UBERON:0003929,1.17e-12,55;UBERON:0005911,4.03e-12,69;UBERON:0000160,4.66e-12,31;UBERON:0004923,1.40e-11,24;UBERON:0000490,9.91e-11,66;UBERON:0002193,1.16e-10,48;UBERON:0002405,1.16e-10,48;UBERON:0005409,3.39e-10,47;UBERON:0000344,7.88e-10,15;UBERON:0002390,8.20e-09,45;UBERON:0003061,8.20e-09,45;UBERON:0001041,1.28e-08,80;UBERON:0001242,2.60e-08,13;UBERON:0001262,2.60e-08,13;UBERON:0004786,2.60e-08,13;UBERON:0000077,8.23e-08,35;UBERON:0004177,4.11e-07,29;UBERON:0005057,4.11e-07,29 | |||
|phase1_expression=0,21.6364752736404,15.4699741392442,7.86406949397758,5.00895729946347,13.9339795686869,18.9226238882376,8.00564605337773,34.7748143714617,28.3218076849612,13.8686554262659,13.4814948702119,5.82082481766099,4.98296293788285,2.33176833270964,5.4668322195253,0.699561878128147,34.2276449413688,37.0208970735495,26.7365480632759,1.02051948181284,4.26951090163807,1.82839852397255,27.6786891432594,19.0409703285751,12.0588712464154,17.230479846363,19.1769397090441,7.41091335879858,8.06496415231778,13.3038306393183,0,0,0,2.3108129580102,2.65975432573588,2.04169356262369,8.78916424547506,3.1253413780952,5.23523743973798,5.29408339227913,8.87959130445979,5.82612423637384,0.881277725829041,0.811015449756117,0.734187008646726,0,0,0,0,0.139986421625363,0,35.0665646660669,10.1550699881588,9.41062637598899,1.54355661621568,0.85960031981627,0.515672092277442,0,0,0,0,0,0,0,1.4209602298922,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0.0914876436024097,0.52091337055676,0.279182999001381,0,0,0,0,0.186399445825301,0.757261933331841,0.377857800533928,2.31891590961342,2.58127163094416,0,0.539703191637817,5.19821133958135,3.58421509677868,0.842666520790511,0,0.779358013808606,1.06001872353102,0,2.56652954828636,0,0,2.81438353314578,3.80039798212648,4.04419556011827,3.19714863213368,34.9566142923682,1.03909497345377,0.346970653532272,0,0.691846491768175,0.904335843315735,1.52865319276416,0.628332956648377,5.19109432242185,2.74738778147832,2.65383165584962,0.323533699894818,1.76673214768315,1.45462575940567,9.31958806090611,0,0.209446706813455,5.10914110417183,6.35020159881377,2.99951365496704,3.17675567682662,0.149790639404823,0.457500602818626,0,0,0.255715457330331,0.20778804455956,0.162241263067758,0.81471491080253,2.86136032403214,0.252722758433675,0.631325567659422,0.130120442962704,0,0,0,0,0,0.0937017245597288,0.258703370739016,0.215567992932842,0.378212160335639,0.351902248327898,0,0,0.696504333044333,1.64625709126355,0.199034266818493,1.40442637462647,2.31613116403244,1.98914449576915,0.207125772535502,0.469052119962192,0,0,0.393528463494808,0.308534225774757,0.465067889500816,0,0.467061369468678,0.658239399653922,1.31333971263276,0.648550476366846,0.877199924551994,1.53685080703735,1.07365135008297,0,0.205809224758569,10.5734010554815,3.96675849995316,0,0.464473343720877,0.644337306610467,2.42020229548011,2.89091456998331,3.80451252225118,3.32170343081158,2.9645811850322,2.76468729680296,2.78539060857611,3.31438948102504,11.6846523125049,7.99710784536369,8.76221602319216,0.189667900953082,0.456994050438915,3.38123207019241,0.203651327845314,0.193952487167626,0.841629838683823,0.948548056863859,1.62371162777562,1.56998727841375,0.493588655687202,1.48226313543574,1.00107063429656,1.17935397067922,1.12431056192427,0.811440485554012,1.4470629585145,1.2731292589071,3.45235364940973,5.5125977103512,1.37280706594041,5.75072826109418,3.72140947668503,2.18426371180192,2.77836765741823,4.4849353380478,3.85954817090694,4.0645701836653,0,0,0.169745085775188,0,0.670025029767263,1.6663054862021,1.56106918286239,2.52216230569906,0.44292937929755,1.59454768657487,4.7520361267564,5.69860440157455,3.47157740595628,13.5712155545345,26.6513785071168,2.45882136509518,1.65562047782839,0.321101179975584,0.234423373184406,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0.321321316421807,0.709700426041343,0.178065603667255,0,0.989820737835213,0,0,0.302323556964751,1.13163047853539,0.590603785761546,1.22974059177571,2.32585463851399,1.09060118843252,1.06949213515416,0.948110273807448,0,2.06271086496374,0.680879211507576,0,0,0.214337035031592,0,0,0,0,1.17335854031855,1.0591603543191,4.85162475720916,6.43056386471772,1.61464426695906,1.93001359770099,0.954978752025092,0.656563598980245,7.57850175237612,0.18542530201051,5.63873906632914,1.03193433981611,1.29636169158798,3.76736914009382,6.42462870288818,8.69357058184786,7.81900777971734,5.318155188299,7.60099855924331,1.90934123603023,0,0,0.432021363287205,1.04544148007234,0.436725127492355,0.944050424693745,0.991841468704031,0.523511883968059,6.73997861117323,2.4853572523477,0,0.299033092087958,0.827292452285488,0.194451188344048,0.258319646955462,0.506868376472335,0.938857909166032,0.2604087696879,0.629156066554265,0.724752362478018,0.576060012515731,1.89606672376907,1.01362607645082,1.1298205288131,1.55904987573354,1.07416017400489,1.19208812868759,1.44234539423963,2.51072196196781,2.72609414859999,1.600342939755,1.41156659191577,2.92373642219257,2.21287235772758,2.57129184799452,0.226730383615211,0.443971906748129,0,0.503653849092235,1.15913756419314,2.064507229963,1.09890974560359,1.50057865355346,1.50471631210609,0,0,0,0.343706364687375,0,0.755393897389701,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0.367687016900028,0.666740183404846,1.03017528619447,0.320919209591815,0.252697211763798,0.50695859978048,0.754505365544305,1.12369808963859,0.640251524048693,1.14870937911227,1.42888107384922,0.811190281613988,0.77163688185482,1.23625770240992,0.441596760403192,1.71434626192708,1.0648548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| |phase1_expression=0,21.6364752736404,15.4699741392442,7.86406949397758,5.00895729946347,13.9339795686869,18.9226238882376,8.00564605337773,34.7748143714617,28.3218076849612,13.8686554262659,13.4814948702119,5.82082481766099,4.98296293788285,2.33176833270964,5.4668322195253,0.699561878128147,34.2276449413688,37.0208970735495,26.7365480632759,1.02051948181284,4.26951090163807,1.82839852397255,27.6786891432594,19.0409703285751,12.0588712464154,17.230479846363,19.1769397090441,7.41091335879858,8.06496415231778,13.3038306393183,0,0,0,2.3108129580102,2.65975432573588,2.04169356262369,8.78916424547506,3.1253413780952,5.23523743973798,5.29408339227913,8.87959130445979,5.82612423637384,0.881277725829041,0.811015449756117,0.734187008646726,0,0,0,0,0.139986421625363,0,35.0665646660669,10.1550699881588,9.41062637598899,1.54355661621568,0.85960031981627,0.515672092277442,0,0,0,0,0,0,0,1.4209602298922,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0.0914876436024097,0.52091337055676,0.279182999001381,0,0,0,0,0.186399445825301,0.757261933331841,0.377857800533928,2.31891590961342,2.58127163094416,0,0.539703191637817,5.19821133958135,3.58421509677868,0.842666520790511,0,0.779358013808606,1.06001872353102,0,2.56652954828636,0,0,2.81438353314578,3.80039798212648,4.04419556011827,3.19714863213368,34.9566142923682,1.03909497345377,0.346970653532272,0,0.691846491768175,0.904335843315735,1.52865319276416,0.628332956648377,5.19109432242185,2.74738778147832,2.65383165584962,0.323533699894818,1.76673214768315,1.45462575940567,9.31958806090611,0,0.209446706813455,5.10914110417183,6.35020159881377,2.99951365496704,3.17675567682662,0.149790639404823,0.457500602818626,0,0,0.255715457330331,0.20778804455956,0.162241263067758,0.81471491080253,2.86136032403214,0.252722758433675,0.631325567659422,0.130120442962704,0,0,0,0,0,0.0937017245597288,0.258703370739016,0.215567992932842,0.378212160335639,0.351902248327898,0,0,0.696504333044333,1.64625709126355,0.199034266818493,1.40442637462647,2.31613116403244,1.98914449576915,0.207125772535502,0.469052119962192,0,0,0.393528463494808,0.308534225774757,0.465067889500816,0,0.467061369468678,0.658239399653922,1.31333971263276,0.648550476366846,0.877199924551994,1.53685080703735,1.07365135008297,0,0.205809224758569,10.5734010554815,3.96675849995316,0,0.464473343720877,0.644337306610467,2.42020229548011,2.89091456998331,3.80451252225118,3.32170343081158,2.9645811850322,2.76468729680296,2.78539060857611,3.31438948102504,11.6846523125049,7.99710784536369,8.76221602319216,0.189667900953082,0.456994050438915,3.38123207019241,0.203651327845314,0.193952487167626,0.841629838683823,0.948548056863859,1.62371162777562,1.56998727841375,0.493588655687202,1.48226313543574,1.00107063429656,1.17935397067922,1.12431056192427,0.811440485554012,1.4470629585145,1.2731292589071,3.45235364940973,5.5125977103512,1.37280706594041,5.75072826109418,3.72140947668503,2.18426371180192,2.77836765741823,4.4849353380478,3.85954817090694,4.0645701836653,0,0,0.169745085775188,0,0.670025029767263,1.6663054862021,1.56106918286239,2.52216230569906,0.44292937929755,1.59454768657487,4.7520361267564,5.69860440157455,3.47157740595628,13.5712155545345,26.6513785071168,2.45882136509518,1.65562047782839,0.321101179975584,0.234423373184406,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0.321321316421807,0.709700426041343,0.178065603667255,0,0.989820737835213,0,0,0.302323556964751,1.13163047853539,0.590603785761546,1.22974059177571,2.32585463851399,1.09060118843252,1.06949213515416,0.948110273807448,0,2.06271086496374,0.680879211507576,0,0,0.214337035031592,0,0,0,0,1.17335854031855,1.0591603543191,4.85162475720916,6.43056386471772,1.61464426695906,1.93001359770099,0.954978752025092,0.656563598980245,7.57850175237612,0.18542530201051,5.63873906632914,1.03193433981611,1.29636169158798,3.76736914009382,6.42462870288818,8.69357058184786,7.81900777971734,5.318155188299,7.60099855924331,1.90934123603023,0,0,0.432021363287205,1.04544148007234,0.436725127492355,0.944050424693745,0.991841468704031,0.523511883968059,6.73997861117323,2.4853572523477,0,0.299033092087958,0.827292452285488,0.194451188344048,0.258319646955462,0.506868376472335,0.938857909166032,0.2604087696879,0.629156066554265,0.724752362478018,0.576060012515731,1.89606672376907,1.01362607645082,1.1298205288131,1.55904987573354,1.07416017400489,1.19208812868759,1.44234539423963,2.51072196196781,2.72609414859999,1.600342939755,1.41156659191577,2.92373642219257,2.21287235772758,2.57129184799452,0.226730383615211,0.443971906748129,0,0.503653849092235,1.15913756419314,2.064507229963,1.09890974560359,1.50057865355346,1.50471631210609,0,0,0,0.343706364687375,0,0.755393897389701,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0.367687016900028,0.666740183404846,1.03017528619447,0.320919209591815,0.252697211763798,0.50695859978048,0.754505365544305,1.12369808963859,0.640251524048693,1.14870937911227,1.42888107384922,0.811190281613988,0.77163688185482,1.23625770240992,0.441596760403192,1.71434626192708,1.0648548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| ||
|short_description=p@chrX:34683959..34683976,+ | |short_description=p@chrX:34683959..34683976,+ | ||
}} | }} |
Revision as of 03:48, 14 November 2012
Short description: | p@chrX:34683959..34683976, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:34683959..34683976, + |
Coexpression cluster: | MCL_coexpression_mm9:2768 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 9.02e-09 | 32 |
hematopoietic oligopotent progenitor cell | 9.02e-09 | 32 |
hematopoietic stem cell | 9.02e-09 | 32 |
hematopoietic multipotent progenitor cell | 9.02e-09 | 32 |
lymphoid lineage restricted progenitor cell | 1.50e-08 | 12 |
hematopoietic lineage restricted progenitor cell | 8.37e-08 | 25 |
T cell | 9.77e-08 | 11 |
pro-T cell | 9.77e-08 | 11 |
lymphocyte | 1.76e-07 | 13 |
common lymphoid progenitor | 1.76e-07 | 13 |
mature alpha-beta T cell | 2.46e-07 | 9 |
alpha-beta T cell | 2.46e-07 | 9 |
immature T cell | 2.46e-07 | 9 |
mature T cell | 2.46e-07 | 9 |
immature alpha-beta T cell | 2.46e-07 | 9 |
leukocyte | 3.95e-07 | 17 |
nongranular leukocyte | 3.95e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.37e-22 | 118 |
endoderm | 2.37e-22 | 118 |
presumptive endoderm | 2.37e-22 | 118 |
digestive system | 3.27e-22 | 116 |
digestive tract | 3.27e-22 | 116 |
primitive gut | 3.27e-22 | 116 |
subdivision of digestive tract | 9.70e-21 | 114 |
gut epithelium | 1.17e-12 | 55 |
endo-epithelium | 4.03e-12 | 69 |
intestine | 4.66e-12 | 31 |
organ component layer | 1.40e-11 | 24 |
unilaminar epithelium | 9.91e-11 | 66 |
hemolymphoid system | 1.16e-10 | 48 |
immune system | 1.16e-10 | 48 |
gastrointestinal system | 3.39e-10 | 47 |
mucosa | 7.88e-10 | 15 |
hematopoietic system | 8.20e-09 | 45 |
blood island | 8.20e-09 | 45 |
foregut | 1.28e-08 | 80 |
intestinal mucosa | 2.60e-08 | 13 |
wall of intestine | 2.60e-08 | 13 |
gastrointestinal system mucosa | 2.60e-08 | 13 |
mixed endoderm/mesoderm-derived structure | 8.23e-08 | 35 |
hemopoietic organ | 4.11e-07 | 29 |
immune organ | 4.11e-07 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.