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MCL coexpression mm9:51: Difference between revisions

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|coexpression_dpi_cluster_scores_median=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289596390303526,0.345638597199581,0.721171817940391,0.782967702469925,0.693602735660079,0.641234392262142,0.493435890517237,0.507227296061234,0.465139243436776,0.451627322580897,0.363751158704585,0.316397440896801,0.352328019315892,0.380667522557614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|coexpression_dpi_cluster_scores_median=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289596390303526,0.345638597199581,0.721171817940391,0.782967702469925,0.693602735660079,0.641234392262142,0.493435890517237,0.507227296061234,0.465139243436776,0.451627322580897,0.363751158704585,0.316397440896801,0.352328019315892,0.380667522557614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|gostat_on_MCL_coexpression=
|gostat_on_MCL_coexpression=
|ontology_enrichment_celltype=
|ontology_enrichment_disease=
|ontology_enrichment_uberon=UBERON:0002370!2.55e-52!23;UBERON:0000974!2.55e-52!23;UBERON:0004807!2.55e-52!23;UBERON:0005058!2.55e-52!23;UBERON:0003351!2.55e-52!23;UBERON:0009113!2.55e-52!23;UBERON:0003295!2.55e-52!23;UBERON:0009722!2.55e-52!23;UBERON:0005562!2.55e-52!23;UBERON:0007690!2.55e-52!23;UBERON:0006562!4.27e-50!24;UBERON:0003408!4.27e-50!24;UBERON:0001557!4.27e-50!24;UBERON:0001042!4.27e-50!24;UBERON:0008814!4.27e-50!24;UBERON:0009145!4.27e-50!24;UBERON:0000072!2.08e-44!27;UBERON:0004177!2.87e-41!29;UBERON:0005057!2.87e-41!29;UBERON:0000077!5.35e-34!35;UBERON:0000063!5.35e-34!35;UBERON:0007811!5.07e-33!36;UBERON:0000065!7.54e-29!41;UBERON:0001004!3.92e-28!42;UBERON:0000153!1.89e-27!43;UBERON:0002390!3.55e-26!45;UBERON:0003061!3.55e-26!45;UBERON:0002193!1.84e-24!48;UBERON:0002405!1.84e-24!48;UBERON:0003929!3.46e-21!55;UBERON:0002368!2.59e-19!60;UBERON:0002530!1.00e-17!65;UBERON:0000490!1.95e-17!66;UBERON:0005911!1.28e-16!69;UBERON:0000949!7.18e-16!72;UBERON:0001041!3.81e-14!80;UBERON:0003081!6.82e-13!87;UBERON:0000064!3.73e-11!99;UBERON:0004921!1.73e-09!114;UBERON:0001007!2.68e-09!116;UBERON:0001555!2.68e-09!116;UBERON:0007026!2.68e-09!116;UBERON:0004119!4.08e-09!118;UBERON:0000925!4.08e-09!118;UBERON:0006595!4.08e-09!118;UBERON:0000926!6.15e-09!120;UBERON:0004120!6.15e-09!120;UBERON:0006603!6.15e-09!120;UBERON:0001048!7.70e-08!134;UBERON:0000475!7.87e-07!150
}}
}}

Revision as of 20:48, 11 October 2012


Phase1 CAGE Peaks

 Short description
Mm9::chr10:126762691..126762707,+p7@Arhgap9
Mm9::chr10:126762711..126762731,+p5@Arhgap9
Mm9::chr10:126762817..126762838,+p6@Arhgap9
Mm9::chr10:126763169..126763176,+p@chr10:126763169..126763176
+
Mm9::chr10:20774816..20774827,+p@chr10:20774816..20774827
+
Mm9::chr10:60637932..60637948,+p5@Tbata
Mm9::chr10:60637954..60637970,+p6@Tbata
Mm9::chr10:60638058..60638066,+p9@Tbata
Mm9::chr10:60638133..60638147,+p4@Tbata
Mm9::chr10:60643127..60643171,-p@chr10:60643127..60643171
-
Mm9::chr10:77386871..77386880,-p@chr10:77386871..77386880
-
Mm9::chr10:77386926..77386949,-p@chr10:77386926..77386949
-
Mm9::chr10:77387030..77387050,-p@chr10:77387030..77387050
-
Mm9::chr10:77506405..77506441,-p1@Aire
Mm9::chr10:78039839..78039855,+p@chr10:78039839..78039855
+
Mm9::chr11:100119381..100119393,-p@chr11:100119381..100119393
-
Mm9::chr11:100119426..100119432,-p@chr11:100119426..100119432
-
Mm9::chr11:113570967..113571004,-p1@Cpsf4l
Mm9::chr11:119717571..119717582,+p5@Rptor
Mm9::chr11:30059649..30059660,-p@chr11:30059649..30059660
-
Mm9::chr11:30059661..30059672,-p@chr11:30059661..30059672
-
Mm9::chr11:30059687..30059699,-p@chr11:30059687..30059699
-
Mm9::chr11:50532343..50532355,-p1@ENSMUST00000137567
Mm9::chr11:55017898..55017914,+p3@Slc36a1
Mm9::chr11:76076593..76076605,-p@chr11:76076593..76076605
-
Mm9::chr11:78207980..78207991,+p2@Gm11194
Mm9::chr11:78207995..78208007,+p1@Gm11194
Mm9::chr11:87627824..87627837,-p@chr11:87627824..87627837
-
Mm9::chr11:88935235..88935248,+p1@Gm525
Mm9::chr11:97676953..97676964,+p@chr11:97676953..97676964
+
Mm9::chr11:98338697..98338709,-p9@Ikzf3
Mm9::chr11:98752497..98752515,+p5@Wipf2
Mm9::chr12:102126236..102126247,-p5@Gpr68
Mm9::chr12:105501327..105501339,+p2@Serpina3i
Mm9::chr12:105501343..105501368,+p1@Serpina3i
Mm9::chr12:107824079..107824087,+p@chr12:107824079..107824087
+
Mm9::chr12:108395366..108395381,-p@chr12:108395366..108395381
-
Mm9::chr12:53919495..53919516,+p@chr12:53919495..53919516
+
Mm9::chr13:104711558..104711571,-p@chr13:104711558..104711571
-
Mm9::chr13:114358076..114358079,-p@chr13:114358076..114358079
-
Mm9::chr13:19276796..19276850,+p1@ENSMUST00000103554
p1@uc007por.1
Mm9::chr13:19276855..19276867,+p@chr13:19276855..19276867
+
Mm9::chr13:19276874..19276891,+p@chr13:19276874..19276891
+
Mm9::chr13:19276906..19276917,+p@chr13:19276906..19276917
+
Mm9::chr13:19276964..19276975,+p@chr13:19276964..19276975
+
Mm9::chr13:19277375..19277387,-p@chr13:19277375..19277387
-
Mm9::chr13:19284059..19284066,+p2@ENSMUST00000103556
Mm9::chr13:19284104..19284120,+p1@ENSMUST00000103556
Mm9::chr13:19284388..19284398,+p@chr13:19284388..19284398
+
Mm9::chr13:19284533..19284543,+p@chr13:19284533..19284543
+
Mm9::chr13:19284549..19284556,+p@chr13:19284549..19284556
+
Mm9::chr13:19428694..19428700,-p1@uc007pov.1
Mm9::chr13:19428904..19428913,-p2@ENSMUST00000103563
Mm9::chr13:19428916..19428944,-p1@ENSMUST00000103563
Mm9::chr13:19428995..19429002,-p2@uc007pow.1
Mm9::chr13:19429048..19429059,-p1@uc007pow.1
Mm9::chr13:19431685..19431698,+p1@uc007pox.1
Mm9::chr13:19431715..19431732,+p2@uc007pox.1
Mm9::chr13:22101582..22101593,-p3@Prss16
Mm9::chr13:22101599..22101618,-p1@Prss16
Mm9::chr13:22101626..22101640,-p2@Prss16
Mm9::chr14:124591575..124591649,-p@chr14:124591575..124591649
-
Mm9::chr14:124591711..124591721,-p@chr14:124591711..124591721
-
Mm9::chr14:124591751..124591782,-p3@Fgf14
Mm9::chr14:124591810..124591821,-p6@Fgf14
Mm9::chr14:27411053..27411060,-p@chr14:27411053..27411060
-
Mm9::chr14:27411108..27411120,-p@chr14:27411108..27411120
-
Mm9::chr14:27411125..27411136,-p@chr14:27411125..27411136
-
Mm9::chr14:27411154..27411163,-p@chr14:27411154..27411163
-
Mm9::chr14:30822164..30822185,-p5@Il17rb
Mm9::chr14:30822469..30822479,-p6@Il17rb
Mm9::chr14:30822544..30822553,-p7@Il17rb
Mm9::chr14:41706511..41706526,-p3@Sh2d4b
Mm9::chr14:41706597..41706608,-p1@Sh2d4b
Mm9::chr14:41712544..41712552,-p@chr14:41712544..41712552
-
Mm9::chr14:41712563..41712590,-p@chr14:41712563..41712590
-
Mm9::chr14:41712597..41712623,-p@chr14:41712597..41712623
-
Mm9::chr14:41712656..41712667,-p@chr14:41712656..41712667
-
Mm9::chr14:41712678..41712687,-p@chr14:41712678..41712687
-
Mm9::chr14:52628370..52628387,-p@chr14:52628370..52628387
-
Mm9::chr14:54420380..54420388,+p3@uc007ttn.1
Mm9::chr14:54420472..54420488,+p2@uc007ttn.1
Mm9::chr14:54420490..54420509,+p1@uc007ttn.1
Mm9::chr14:54756415..54756425,+p1@uc007tty.1
Mm9::chr14:55244142..55244154,+p1@Psmb11
Mm9::chr14:79598950..79598967,-p2@uc007usr.1
Mm9::chr14:79598979..79598998,-p3@uc007usr.1
Mm9::chr14:79599007..79599034,-p1@uc007usr.1
Mm9::chr14:80275375..80275407,+p@chr14:80275375..80275407
+
Mm9::chr14:80290899..80290910,+p@chr14:80290899..80290910
+
Mm9::chr15:12109407..12109419,+p9@Zfr
Mm9::chr15:12109474..12109490,+p11@Zfr
Mm9::chr15:12853819..12853845,+p@chr15:12853819..12853845
+
Mm9::chr15:12853847..12853860,+p@chr15:12853847..12853860
+
Mm9::chr15:44289068..44289080,+p5@Pkhd1l1
Mm9::chr15:58281216..58281228,+p@chr15:58281216..58281228
+
Mm9::chr15:63087493..63087508,+p1@uc007vyq.1
Mm9::chr15:63102011..63102016,-p@chr15:63102011..63102016
-
Mm9::chr15:63311098..63311109,-p@chr15:63311098..63311109
-
Mm9::chr15:63311177..63311201,-p1@LOC432958
Mm9::chr15:63311216..63311225,-p4@LOC432958
Mm9::chr15:78557178..78557194,-p@chr15:78557178..78557194
-
Mm9::chr15:84154622..84154634,+p@chr15:84154622..84154634
+
Mm9::chr15:95589675..95589679,-p@chr15:95589675..95589679
-
Mm9::chr15:95603054..95603069,-p@chr15:95603054..95603069
-
Mm9::chr16:18460140..18460174,-p@chr16:18460140..18460174
-
Mm9::chr16:32174553..32174566,-p@chr16:32174553..32174566
-
Mm9::chr16:87787785..87787796,+p@chr16:87787785..87787796
+
Mm9::chr16:87824001..87824006,+p@chr16:87824001..87824006
+
Mm9::chr16:93150685..93150689,-p@chr16:93150685..93150689
-
Mm9::chr16:96142942..96142946,+p@chr16:96142942..96142946
+
Mm9::chr17:13811735..13811747,-p@chr17:13811735..13811747
-
Mm9::chr17:28642685..28642697,+p@chr17:28642685..28642697
+
Mm9::chr17:29272354..29272379,+p1@Rab44
Mm9::chr17:31121035..31121045,+p@chr17:31121035..31121045
+
Mm9::chr17:34345697..34345718,+p@chr17:34345697..34345718
+
Mm9::chr17:34345723..34345737,+p@chr17:34345723..34345737
+
Mm9::chr17:35032928..35032941,-p8@C2
Mm9::chr17:35136972..35136982,-p@chr17:35136972..35136982
-
Mm9::chr17:46565866..46565878,+p2@Crip3
Mm9::chr17:46565879..46565898,+p1@Crip3
Mm9::chr17:46570650..46570664,-p@chr17:46570650..46570664
-
Mm9::chr17:46900525..46900593,-p1@Ptcra
Mm9::chr17:46900596..46900624,-p2@Ptcra
Mm9::chr17:46900640..46900657,-p3@Ptcra
Mm9::chr17:46900664..46900673,-p7@Ptcra
Mm9::chr17:46900676..46900690,-p4@Ptcra
Mm9::chr17:46900697..46900715,-p5@Ptcra
Mm9::chr17:46900721..46900728,-p8@Ptcra
Mm9::chr17:46900741..46900757,-p6@Ptcra
Mm9::chr17:5278453..5278464,+p@chr17:5278453..5278464
+
Mm9::chr17:5278502..5278507,+p@chr17:5278502..5278507
+
Mm9::chr17:56443762..56443778,+p4@Uhrf1
Mm9::chr17:57216465..57216490,-p@chr17:57216465..57216490
-
Mm9::chr17:72150121..72150161,+p@chr17:72150121..72150161
+
Mm9::chr18:12125647..12125665,-p@chr18:12125647..12125665
-
Mm9::chr18:32016694..32016703,+p@chr18:32016694..32016703
+
Mm9::chr18:32016728..32016739,+p@chr18:32016728..32016739
+
Mm9::chr18:35808120..35808136,-p@chr18:35808120..35808136
-
Mm9::chr18:35808137..35808156,-p@chr18:35808137..35808156
-
Mm9::chr18:35808161..35808170,-p@chr18:35808161..35808170
-
Mm9::chr18:44971310..44971347,+p@chr18:44971310..44971347
+
Mm9::chr18:61812103..61812118,-p@chr18:61812103..61812118
-
Mm9::chr19:3441265..3441276,-p@chr19:3441265..3441276
-
Mm9::chr19:3441286..3441304,-p@chr19:3441286..3441304
-
Mm9::chr19:45705576..45705596,-p7@Fbxw4
Mm9::chr19:58528805..58528811,-p@chr19:58528805..58528811
-
Mm9::chr1:130487744..130487760,-p@chr1:130487744..130487760
-
Mm9::chr1:133096564..133096569,-p4@Rassf5
Mm9::chr1:138152327..138152348,-p@chr1:138152327..138152348
-
Mm9::chr1:169203647..169203665,-p@chr1:169203647..169203665
-
Mm9::chr1:191622405..191622417,+p@chr1:191622405..191622417
+
Mm9::chr1:36949549..36949574,-p@chr1:36949549..36949574
-
Mm9::chr1:52207692..52207702,+p@chr1:52207692..52207702
+
Mm9::chr1:52207778..52207788,+p@chr1:52207778..52207788
+
Mm9::chr1:52207850..52207861,+p@chr1:52207850..52207861
+
Mm9::chr1:59207758..59207765,+p@chr1:59207758..59207765
+
Mm9::chr1:59208523..59208530,-p@chr1:59208523..59208530
-
Mm9::chr1:72233077..72233081,-p@chr1:72233077..72233081
-
Mm9::chr1:82816695..82816700,+p@chr1:82816695..82816700
+
Mm9::chr1:82818287..82818291,+p@chr1:82818287..82818291
+
Mm9::chr1:94024467..94024480,-p@chr1:94024467..94024480
-
Mm9::chr1:94024513..94024540,-p@chr1:94024513..94024540
-
Mm9::chr1:94734460..94734478,-p@chr1:94734460..94734478
-
Mm9::chr2:119150692..119150716,-p@chr2:119150692..119150716
-
Mm9::chr2:127336871..127336876,-p@chr2:127336871..127336876
-
Mm9::chr2:147187695..147187702,+p8@Pax1
Mm9::chr2:156796220..156796230,-p@chr2:156796220..156796230
-
Mm9::chr2:156796238..156796256,-p@chr2:156796238..156796256
-
Mm9::chr2:156796289..156796309,-p@chr2:156796289..156796309
-
Mm9::chr2:168981201..168981228,-p@chr2:168981201..168981228
-
Mm9::chr2:26357721..26357740,-p@chr2:26357721..26357740
-
Mm9::chr2:26360856..26360860,-p@chr2:26360856..26360860
-
Mm9::chr2:26371548..26371559,+p@chr2:26371548..26371559
+
Mm9::chr2:26371899..26371903,-p@chr2:26371899..26371903
-
Mm9::chr2:26372140..26372155,-p4@Notch1
Mm9::chr2:26372249..26372261,-p5@Notch1
Mm9::chr2:60645469..60645483,-p@chr2:60645469..60645483
-
Mm9::chr2:6393037..6393050,+p1@ENSMUST00000147685
p1@uc008igm.1
Mm9::chr2:75305869..75305881,-p@chr2:75305869..75305881
-
Mm9::chr3:36305299..36305310,-p@chr3:36305299..36305310
-
Mm9::chr3:90364239..90364254,+p@chr3:90364239..90364254
+
Mm9::chr3:95729118..95729123,-p@chr3:95729118..95729123
-
Mm9::chr3:96618441..96618455,-p1@Cd160
Mm9::chr4:106622026..106622035,+p15@Ssbp3
Mm9::chr4:111553203..111553219,-p3@Slc5a9
Mm9::chr4:111553248..111553282,-p2@Slc5a9
Mm9::chr4:111645438..111645459,+p2@Skint7
Mm9::chr4:111645527..111645551,+p1@Skint7
Mm9::chr4:112447465..112447476,-p3@Skint10
Mm9::chr4:125978325..125978339,-p@chr4:125978325..125978339
-
Mm9::chr4:125978348..125978357,-p@chr4:125978348..125978357
-
Mm9::chr4:129235497..129235502,-p8@Lck
Mm9::chr4:140166486..140166517,-p@chr4:140166486..140166517
-
Mm9::chr4:144890677..144890680,-p@chr4:144890677..144890680
-
Mm9::chr4:144905046..144905072,-p1@Tnfrsf8
Mm9::chr4:148325236..148325249,+p@chr4:148325236..148325249
+
Mm9::chr4:148759392..148759412,-p@chr4:148759392..148759412
-
Mm9::chr4:44119408..44119432,+p@chr4:44119408..44119432
+
Mm9::chr4:47315422..47315435,-p@chr4:47315422..47315435
-
Mm9::chr4:59897509..59897514,+p4@Snx30
Mm9::chr4:59927822..59927833,-p2@Slc46a2
Mm9::chr5:103930384..103930444,+p@chr5:103930384..103930444
+
Mm9::chr5:108494686..108494701,+p3@Mtf2
Mm9::chr5:108494765..108494786,+p2@Mtf2
Mm9::chr5:108495388..108495410,+p@chr5:108495388..108495410
+
Mm9::chr5:108590119..108590145,+p@chr5:108590119..108590145
+
Mm9::chr5:113764287..113764298,+p@chr5:113764287..113764298
+
Mm9::chr5:115400831..115400862,-p@chr5:115400831..115400862
-
Mm9::chr5:115402759..115402772,-p@chr5:115402759..115402772
-
Mm9::chr5:121135755..121135776,-p@chr5:121135755..121135776
-
Mm9::chr5:124698382..124698408,-p@chr5:124698382..124698408
-
Mm9::chr5:140913134..140913145,+p@chr5:140913134..140913145
+
Mm9::chr5:151558870..151558895,+p4@Pds5b
Mm9::chr5:151559409..151559421,+p@chr5:151559409..151559421
+
Mm9::chr5:23024543..23024575,-p6@Srpk2
Mm9::chr5:23024613..23024627,-p10@Srpk2
Mm9::chr5:65071566..65071581,-p@chr5:65071566..65071581
-
Mm9::chr5:65071584..65071595,-p@chr5:65071584..65071595
-
Mm9::chr5:66252500..66252557,+p2@Rhoh
Mm9::chr5:66253889..66253892,+p12@Rhoh
Mm9::chr6:100131711..100131727,-p@chr6:100131711..100131727
-
Mm9::chr6:115391541..115391552,+p@chr6:115391541..115391552
+
Mm9::chr6:140540128..140540138,+p@chr6:140540128..140540138
+
Mm9::chr6:140540148..140540162,+p@chr6:140540148..140540162
+
Mm9::chr6:140540165..140540183,+p@chr6:140540165..140540183
+
Mm9::chr6:33005933..33005950,-p@chr6:33005933..33005950
-
Mm9::chr6:41483266..41483277,+p@chr6:41483266..41483277
+
Mm9::chr6:41483505..41483517,+p2@uc009bpb.1
p2@uc009bpc.1
p2@uc009bpd.1
p2@uc009bpe.1
Mm9::chr6:41492605..41492621,+p@chr6:41492605..41492621
+
Mm9::chr6:41492643..41492662,+p@chr6:41492643..41492662
+
Mm9::chr6:67065665..67065702,+p1@ENSMUST00000169018
p1@uc009cff.1
p1@uc009cfg.1
Mm9::chr6:67289655..67289668,-p6@Il12rb2
Mm9::chr6:67326282..67326305,-p2@Il12rb2
Mm9::chr6:83145993..83146010,+p@chr6:83145993..83146010
+
Mm9::chr6:83146019..83146028,+p@chr6:83146019..83146028
+
Mm9::chr6:91215924..91215931,+p7@Fbln2
Mm9::chr6:91215940..91215953,+p4@Fbln2
Mm9::chr6:91215956..91215966,+p5@Fbln2
Mm9::chr7:105711492..105711514,-p1@ENSMUST00000069035
p1@uc009ikm.1
Mm9::chr7:105711526..105711536,-p2@uc009ikm.1
Mm9::chr7:120438834..120438847,+p@chr7:120438834..120438847
+
Mm9::chr7:151592834..151592853,-p1@ENSMUST00000125355
Mm9::chr7:151593015..151593036,+p@chr7:151593015..151593036
+
Mm9::chr7:20284943..20284956,-p6@Apoe
Mm9::chr7:26015968..26015975,-p@chr7:26015968..26015975
-
Mm9::chr7:29570384..29570403,+p3@Sirt2
Mm9::chr7:35533308..35533313,-p3@Chst8
Mm9::chr7:56598791..56598805,+p@chr7:56598791..56598805
+
Mm9::chr7:56598819..56598884,+p@chr7:56598819..56598884
+
Mm9::chr7:75334798..75334809,+p@chr7:75334798..75334809
+
Mm9::chr7:75409467..75409482,-p3@Pgpep1l
Mm9::chr7:75409486..75409508,-p4@Pgpep1l
Mm9::chr7:75410363..75410393,-p@chr7:75410363..75410393
-
Mm9::chr7:75419403..75419408,+p@chr7:75419403..75419408
+
Mm9::chr7:89003879..89003896,+p5@Tm6sf1
Mm9::chr8:108461916..108461942,-p2@Psmb10
Mm9::chr8:108767177..108767185,+p@chr8:108767177..108767185
+
Mm9::chr8:108767200..108767211,+p@chr8:108767200..108767211
+
Mm9::chr8:122109721..122109751,-p@chr8:122109721..122109751
-
Mm9::chr8:125921676..125921687,+p6@Tcf25
Mm9::chr8:125921689..125921725,+p3@Tcf25
Mm9::chr8:126545468..126545479,+p5@Urb2
Mm9::chr8:8335065..8335080,+p1@uc009kud.1
Mm9::chr9:103325476..103325479,+p4@5830418P13Rik
Mm9::chr9:104005331..104005346,-p1@Ccrl1
Mm9::chr9:114997952..114997965,+p1@Osbpl10
Mm9::chr9:43802065..43802076,+p1@uc009pbk.1
Mm9::chr9:44788413..44788424,-p4@Cd3g
Mm9::chr9:44793518..44793537,+p@chr9:44793518..44793537
+
Mm9::chr9:44847829..44847840,+p@chr9:44847829..44847840
+
Mm9::chr9:44847860..44847875,+p@chr9:44847860..44847875
+
Mm9::chr9:51012957..51012962,+p@chr9:51012957..51012962
+
Mm9::chr9:60958772..60958804,+p@chr9:60958772..60958804
+
Mm9::chr9:61809424..61809458,-p@chr9:61809424..61809458
-
Mm9::chr9:80153572..80153583,+p8@Myo6
Mm9::chr9:94570038..94570060,+p4@Slc9a9
Mm9::chrX:39777557..39777567,+p@chrX:39777557..39777567
+


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

no results for this coexpression

Relative expression of the co-expression cluster over median <br>Analyst:




Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br><br>uberon_data<br><br>

Uber Anatomy
Ontology termp-valuen
thymus2.55e-5223
neck2.55e-5223
respiratory system epithelium2.55e-5223
hemolymphoid system gland2.55e-5223
pharyngeal epithelium2.55e-5223
thymic region2.55e-5223
pharyngeal gland2.55e-5223
entire pharyngeal arch endoderm2.55e-5223
thymus primordium2.55e-5223
early pharyngeal endoderm2.55e-5223
pharynx4.27e-5024
gland of gut4.27e-5024
upper respiratory tract4.27e-5024
chordate pharynx4.27e-5024
pharyngeal arch system4.27e-5024
pharyngeal region of foregut4.27e-5024
segment of respiratory tract2.08e-4427
hemopoietic organ2.87e-4129
immune organ2.87e-4129
mixed endoderm/mesoderm-derived structure5.35e-3435
organ segment5.35e-3435
craniocervical region5.07e-3336
respiratory tract7.54e-2941
respiratory system3.92e-2842
anterior region of body1.89e-2743
hematopoietic system3.55e-2645
blood island3.55e-2645
hemolymphoid system1.84e-2448
immune system1.84e-2448
gut epithelium3.46e-2155
endocrine gland2.59e-1960
gland1.00e-1765
unilaminar epithelium1.95e-1766
endo-epithelium1.28e-1669
endocrine system7.18e-1672
foregut3.81e-1480
lateral plate mesoderm6.82e-1387
organ part3.73e-1199
subdivision of digestive tract1.73e-09114
digestive system2.68e-09116
digestive tract2.68e-09116
primitive gut2.68e-09116
endoderm-derived structure4.08e-09118
endoderm4.08e-09118
presumptive endoderm4.08e-09118
mesoderm6.15e-09120
mesoderm-derived structure6.15e-09120
presumptive mesoderm6.15e-09120
primordium7.70e-08134
organism subdivision7.87e-07150


TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs




JASPAR motifs


Motifs-log10(p-value)

{{{tfbs_overrepresentation_jaspar}}}

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