FFCP PHASE1:Hg19::chr7:136553519..136553541,+: Difference between revisions
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002622;4.52e-12;3!CL:0002504;8.69e-12;3!CL:1000279;8.69e-12;3!CL:1000280;8.69e-12;3!CL:0002195;2.71e-09;2!CL:0002571;2.71e-09;2!CL:1000487;2.20e-08;2 | |ontology_enrichment_celltype_v019=CL:0002622;4.52e-12;3!CL:0002504;8.69e-12;3!CL:1000279;8.69e-12;3!CL:1000280;8.69e-12;3!CL:0002195;2.71e-09;2!CL:0002571;2.71e-09;2!CL:1000487;2.20e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002622,6.35e-12,3;CL:0002504,7.65e-12,3;CL:1000279,7.65e-12,3;CL:1000280,7.65e-12,3;CL:0002195,2.61e-09,2;CL:0002571,2.61e-09,2;CL:1000487,1.94e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.78e-09;4!UBERON:0007284;1.78e-09;4 | |ontology_enrichment_development_v019=UBERON:0005062;1.78e-09;4!UBERON:0007284;1.78e-09;4 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;8.56e-09;2!DOID:3307;1.14e-08;2 | |ontology_enrichment_disease_v019=DOID:114;8.56e-09;2!DOID:3307;1.14e-08;2 | ||
|ontology_enrichment_disease_v019_2=DOID:114,8.42e-09,2;DOID:3307,9.44e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.55e-16!115;UBERON:0001950!6.20e-14!20;UBERON:0002346!2.44e-13!90;UBERON:0001049!5.25e-13!57;UBERON:0005068!5.25e-13!57;UBERON:0006241!5.25e-13!57;UBERON:0007135!5.25e-13!57;UBERON:0000073!5.69e-13!94;UBERON:0001016!5.69e-13!94;UBERON:0003075!1.74e-12!86;UBERON:0007284!1.74e-12!86;UBERON:0002619!2.73e-12!22;UBERON:0005743!1.53e-11!86;UBERON:0002616!2.69e-11!59;UBERON:0000062!1.36e-10!511;UBERON:0000956!2.57e-10!25;UBERON:0000203!2.57e-10!25;UBERON:0001017!2.78e-10!82;UBERON:0000955!8.22e-10!69;UBERON:0006238!8.22e-10!69;UBERON:0002020!1.16e-09!34;UBERON:0003528!1.16e-09!34;UBERON:0001893!1.55e-09!34;UBERON:0001869!2.14e-09!32;UBERON:0002780!8.29e-09!41;UBERON:0001890!8.29e-09!41;UBERON:0006240!8.29e-09!41;UBERON:0002791!1.01e-08!33;UBERON:0004111!1.05e-08!241;UBERON:0000481!1.48e-08!347;UBERON:0003080!1.81e-08!42;UBERON:0000468!2.16e-08!659;UBERON:0000475!2.71e-08!365;UBERON:0000025!3.41e-08!194;UBERON:0000064!4.75e-08!219;UBERON:0000924!4.79e-08!173;UBERON:0006601!4.79e-08!173;UBERON:0003056!1.67e-07!61;UBERON:0004121!2.02e-07!169;UBERON:0000477!2.82e-07!286;UBERON:0000033!6.33e-07!123 | |ontology_enrichment_uberon=UBERON:0007023!1.55e-16!115;UBERON:0001950!6.20e-14!20;UBERON:0002346!2.44e-13!90;UBERON:0001049!5.25e-13!57;UBERON:0005068!5.25e-13!57;UBERON:0006241!5.25e-13!57;UBERON:0007135!5.25e-13!57;UBERON:0000073!5.69e-13!94;UBERON:0001016!5.69e-13!94;UBERON:0003075!1.74e-12!86;UBERON:0007284!1.74e-12!86;UBERON:0002619!2.73e-12!22;UBERON:0005743!1.53e-11!86;UBERON:0002616!2.69e-11!59;UBERON:0000062!1.36e-10!511;UBERON:0000956!2.57e-10!25;UBERON:0000203!2.57e-10!25;UBERON:0001017!2.78e-10!82;UBERON:0000955!8.22e-10!69;UBERON:0006238!8.22e-10!69;UBERON:0002020!1.16e-09!34;UBERON:0003528!1.16e-09!34;UBERON:0001893!1.55e-09!34;UBERON:0001869!2.14e-09!32;UBERON:0002780!8.29e-09!41;UBERON:0001890!8.29e-09!41;UBERON:0006240!8.29e-09!41;UBERON:0002791!1.01e-08!33;UBERON:0004111!1.05e-08!241;UBERON:0000481!1.48e-08!347;UBERON:0003080!1.81e-08!42;UBERON:0000468!2.16e-08!659;UBERON:0000475!2.71e-08!365;UBERON:0000025!3.41e-08!194;UBERON:0000064!4.75e-08!219;UBERON:0000924!4.79e-08!173;UBERON:0006601!4.79e-08!173;UBERON:0003056!1.67e-07!61;UBERON:0004121!2.02e-07!169;UBERON:0000477!2.82e-07!286;UBERON:0000033!6.33e-07!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0002367;1.28e-11;11!UBERON:0010147;1.28e-11;11!UBERON:0003937;1.35e-10;12!UBERON:0005399;1.35e-10;12!UBERON:0000160;3.14e-09;17!UBERON:0007100;7.92e-09;25!UBERON:0000059;3.17e-08;11!UBERON:0000077;1.82e-07;27!UBERON:0005409;5.23e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0002367;1.28e-11;11!UBERON:0010147;1.28e-11;11!UBERON:0003937;1.35e-10;12!UBERON:0005399;1.35e-10;12!UBERON:0000160;3.14e-09;17!UBERON:0007100;7.92e-09;25!UBERON:0000059;3.17e-08;11!UBERON:0000077;1.82e-07;27!UBERON:0005409;5.23e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000162,9.64e-16,14;UBERON:0001353,9.64e-16,14;UBERON:0000163,9.64e-16,14;UBERON:0006866,9.64e-16,14;UBERON:0000164,9.64e-16,14;UBERON:0000931,9.64e-16,14;UBERON:0004122,1.33e-14,15;UBERON:0001046,2.45e-14,19;UBERON:0002367,1.21e-11,11;UBERON:0010147,1.21e-11,11;UBERON:0009846,1.21e-11,11;UBERON:0003353,1.21e-11,11;UBERON:0004902,1.21e-11,11;UBERON:0003820,1.21e-11,11;UBERON:0009847,1.21e-11,11;UBERON:0003937,1.28e-10,12;UBERON:0005399,1.28e-10,12;UBERON:0000160,2.59e-09,17;UBERON:0003064,3.63e-09,28;UBERON:0000059,2.98e-08,11;UBERON:0007100,4.58e-08,27;UBERON:0003929,1.60e-07,54;UBERON:0000077,6.41e-07,29;UBERON:0003104,8.07e-07,160;UBERON:0009142,8.07e-07,160;UBERON:0000161,8.17e-07,36;UBERON:0004921,8.91e-07,118 | |||
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| ||
|short_description=p4@CHRM2 | |short_description=p4@CHRM2 | ||
}} | }} |
Revision as of 07:10, 19 November 2012
Short description: | p4@CHRM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_CHRM2_5end |
Coexpression cluster: | C2880_normal_sacrococcigeal_left_heart_stomach_Mesenchymal_smooth |
Association with transcript: | 0bp_to_ENST00000471195_5end |
EntrezGene: | CHRM2 |
HGNC: | 1951 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
prostate stromal cell | 6.35e-12 | 3 |
enteric smooth muscle cell | 7.65e-12 | 3 |
smooth muscle cell of large intestine | 7.65e-12 | 3 |
smooth muscle cell of colon | 7.65e-12 | 3 |
hepatic stem cell | 2.61e-09 | 2 |
hepatic mesenchymal stem cell | 2.61e-09 | 2 |
smooth muscle cell of prostate | 1.94e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
cloaca | 9.64e-16 | 14 |
anal region | 9.64e-16 | 14 |
embryonic cloaca | 9.64e-16 | 14 |
terminal part of digestive tract | 9.64e-16 | 14 |
primitive urogenital sinus | 9.64e-16 | 14 |
proctodeum | 9.64e-16 | 14 |
genitourinary system | 1.33e-14 | 15 |
hindgut | 2.45e-14 | 19 |
prostate gland | 1.21e-11 | 11 |
male accessory sex gland | 1.21e-11 | 11 |
embryonic cloacal epithelium | 1.21e-11 | 11 |
epithelium of hindgut | 1.21e-11 | 11 |
urogenital sinus epithelium | 1.21e-11 | 11 |
prostate bud | 1.21e-11 | 11 |
prostate field | 1.21e-11 | 11 |
sex gland | 1.28e-10 | 12 |
male reproductive gland | 1.28e-10 | 12 |
intestine | 2.59e-09 | 17 |
intermediate mesoderm | 3.63e-09 | 28 |
large intestine | 2.98e-08 | 11 |
primary circulatory organ | 4.58e-08 | 27 |
gut epithelium | 1.60e-07 | 54 |
mixed endoderm/mesoderm-derived structure | 6.41e-07 | 29 |
mesenchyme | 8.07e-07 | 160 |
entire embryonic mesenchyme | 8.07e-07 | 160 |
orifice | 8.17e-07 | 36 |
subdivision of digestive tract | 8.91e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
heart disease | 8.42e-09 | 2 |
teratoma | 9.44e-09 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.