FFCP PHASE1:Hg19::chr17:37894570..37894614,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!9.92e-44!254;CL:0000223!1.39e-20!59;CL:0002076!8.39e-19!43;CL:0002251!5.68e-09!21;CL:0002368!2.67e-07!13;CL:0002159!8.52e-07!13 | |ontology_enrichment_celltype=CL:0000066!9.92e-44!254;CL:0000223!1.39e-20!59;CL:0002076!8.39e-19!43;CL:0002251!5.68e-09!21;CL:0002368!2.67e-07!13;CL:0002159!8.52e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.99e-15;42!CL:1000507;6.59e-10;10!CL:1000494;6.59e-10;10!CL:0002251;1.21e-09;20!CL:0000039;1.18e-07;7!CL:0000586;1.18e-07;7!CL:0002368;1.80e-07;13!CL:0002159;2.87e-07;14!CL:1000497;4.40e-07;17!CL:0002518;4.40e-07;17!CL:0002322;4.87e-07;5!CL:1000449;5.22e-07;15 | |ontology_enrichment_celltype_v019=CL:0002076;1.99e-15;42!CL:1000507;6.59e-10;10!CL:1000494;6.59e-10;10!CL:0002251;1.21e-09;20!CL:0000039;1.18e-07;7!CL:0000586;1.18e-07;7!CL:0002368;1.80e-07;13!CL:0002159;2.87e-07;14!CL:1000497;4.40e-07;17!CL:0002518;4.40e-07;17!CL:0002322;4.87e-07;5!CL:1000449;5.22e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.64e-41,253;CL:0000223,4.45e-21,58;CL:0002076,8.42e-21,42;CL:1000507,6.71e-10,10;CL:1000494,6.71e-10,10;CL:0002251,1.01e-09,20;CL:0000039,9.52e-08,7;CL:0000586,9.52e-08,7;CL:0002368,1.46e-07,13;CL:0002159,2.93e-07,14;CL:1000497,4.40e-07,17;CL:0002518,4.40e-07,17;CL:0002322,4.85e-07,5;CL:1000449,5.22e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000223;1.42e-11;58!UBERON:0001041;2.69e-10;30!UBERON:0006595;8.71e-08;86 | |ontology_enrichment_development_v019=CL:0000223;1.42e-11;58!UBERON:0001041;2.69e-10;30!UBERON:0006595;8.71e-08;86 | ||
|ontology_enrichment_disease=DOID:305!6.16e-36!106;DOID:0050687!1.42e-24!143;DOID:299!6.40e-11!25;DOID:162!3.04e-09!235;DOID:1749!1.30e-08!14;DOID:14566!1.78e-08!239 | |ontology_enrichment_disease=DOID:305!6.16e-36!106;DOID:0050687!1.42e-24!143;DOID:299!6.40e-11!25;DOID:162!3.04e-09!235;DOID:1749!1.30e-08!14;DOID:14566!1.78e-08!239 | ||
|ontology_enrichment_disease_v019=DOID:299;2.24e-12;25!DOID:305;2.72e-10;106!DOID:1749;3.31e-10;14 | |ontology_enrichment_disease_v019=DOID:299;2.24e-12;25!DOID:305;2.72e-10;106!DOID:1749;3.31e-10;14 | ||
|ontology_enrichment_disease_v019_2=DOID:305,6.12e-29,106;DOID:0050687,3.61e-20,143;DOID:299,1.91e-12,25;DOID:1749,2.78e-10,14;DOID:162,8.40e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0004119!7.45e-29!169;UBERON:0000925!7.45e-29!169;UBERON:0006595!7.45e-29!169;UBERON:0001007!4.05e-24!155;UBERON:0001555!4.05e-24!155;UBERON:0007026!4.05e-24!155;UBERON:0004921!8.11e-24!129;UBERON:0004185!8.11e-24!129;UBERON:0000077!3.18e-23!130;UBERON:0000466!1.39e-21!126;UBERON:0000464!2.10e-19!104;UBERON:0001041!3.14e-18!98;UBERON:0005177!4.23e-17!107;UBERON:0001004!2.40e-14!72;UBERON:0005911!2.24e-13!82;UBERON:0002553!3.89e-12!70;UBERON:0001008!4.78e-12!45;UBERON:0000062!7.11e-12!511;UBERON:0009569!8.64e-12!113;UBERON:0006554!1.28e-11!44;UBERON:0001048!1.42e-11!168;UBERON:0000065!1.57e-11!53;UBERON:0005153!2.00e-10!37;UBERON:0008947!2.22e-10!38;UBERON:0003258!2.22e-10!38;UBERON:0005156!4.71e-10!59;UBERON:0000990!4.71e-10!59;UBERON:0003886!8.15e-10!63;UBERON:0003104!1.48e-09!238;UBERON:0009142!1.48e-09!238;UBERON:0005172!5.97e-09!55;UBERON:0005173!5.97e-09!55;UBERON:0003133!6.25e-09!48;UBERON:0000058!9.98e-09!26;UBERON:0000481!1.29e-08!347;UBERON:0000064!1.44e-08!219;UBERON:0000072!1.47e-08!46;UBERON:0003064!1.62e-08!37;UBERON:0000161!4.02e-08!35;UBERON:0005178!4.20e-08!34;UBERON:0002224!4.20e-08!34;UBERON:0005157!6.94e-08!51;UBERON:0002113!9.31e-08!27;UBERON:0003918!9.31e-08!27;UBERON:0005095!9.31e-08!27;UBERON:0007687!9.31e-08!27;UBERON:0005181!1.21e-07!35;UBERON:0002048!1.92e-07!22;UBERON:0000117!1.92e-07!22;UBERON:0000171!1.92e-07!22;UBERON:0000170!1.92e-07!22;UBERON:0005597!1.92e-07!22;UBERON:0000118!1.92e-07!22;UBERON:0004175!2.31e-07!25;UBERON:0005409!2.75e-07!35;UBERON:0000489!2.96e-07!32;UBERON:0000922!3.07e-07!612;UBERON:0000063!4.76e-07!97;UBERON:0000080!5.10e-07!18;UBERON:0002120!5.10e-07!18;UBERON:0004875!5.10e-07!18;UBERON:0005721!5.10e-07!18;UBERON:0005754!5.10e-07!18;UBERON:0007297!5.10e-07!18;UBERON:0003101!5.39e-07!22;UBERON:0000079!5.39e-07!22;UBERON:0002417!5.47e-07!61;UBERON:0000916!5.47e-07!61;UBERON:0002530!9.42e-07!59 | |ontology_enrichment_uberon=UBERON:0004119!7.45e-29!169;UBERON:0000925!7.45e-29!169;UBERON:0006595!7.45e-29!169;UBERON:0001007!4.05e-24!155;UBERON:0001555!4.05e-24!155;UBERON:0007026!4.05e-24!155;UBERON:0004921!8.11e-24!129;UBERON:0004185!8.11e-24!129;UBERON:0000077!3.18e-23!130;UBERON:0000466!1.39e-21!126;UBERON:0000464!2.10e-19!104;UBERON:0001041!3.14e-18!98;UBERON:0005177!4.23e-17!107;UBERON:0001004!2.40e-14!72;UBERON:0005911!2.24e-13!82;UBERON:0002553!3.89e-12!70;UBERON:0001008!4.78e-12!45;UBERON:0000062!7.11e-12!511;UBERON:0009569!8.64e-12!113;UBERON:0006554!1.28e-11!44;UBERON:0001048!1.42e-11!168;UBERON:0000065!1.57e-11!53;UBERON:0005153!2.00e-10!37;UBERON:0008947!2.22e-10!38;UBERON:0003258!2.22e-10!38;UBERON:0005156!4.71e-10!59;UBERON:0000990!4.71e-10!59;UBERON:0003886!8.15e-10!63;UBERON:0003104!1.48e-09!238;UBERON:0009142!1.48e-09!238;UBERON:0005172!5.97e-09!55;UBERON:0005173!5.97e-09!55;UBERON:0003133!6.25e-09!48;UBERON:0000058!9.98e-09!26;UBERON:0000481!1.29e-08!347;UBERON:0000064!1.44e-08!219;UBERON:0000072!1.47e-08!46;UBERON:0003064!1.62e-08!37;UBERON:0000161!4.02e-08!35;UBERON:0005178!4.20e-08!34;UBERON:0002224!4.20e-08!34;UBERON:0005157!6.94e-08!51;UBERON:0002113!9.31e-08!27;UBERON:0003918!9.31e-08!27;UBERON:0005095!9.31e-08!27;UBERON:0007687!9.31e-08!27;UBERON:0005181!1.21e-07!35;UBERON:0002048!1.92e-07!22;UBERON:0000117!1.92e-07!22;UBERON:0000171!1.92e-07!22;UBERON:0000170!1.92e-07!22;UBERON:0005597!1.92e-07!22;UBERON:0000118!1.92e-07!22;UBERON:0004175!2.31e-07!25;UBERON:0005409!2.75e-07!35;UBERON:0000489!2.96e-07!32;UBERON:0000922!3.07e-07!612;UBERON:0000063!4.76e-07!97;UBERON:0000080!5.10e-07!18;UBERON:0002120!5.10e-07!18;UBERON:0004875!5.10e-07!18;UBERON:0005721!5.10e-07!18;UBERON:0005754!5.10e-07!18;UBERON:0007297!5.10e-07!18;UBERON:0003101!5.39e-07!22;UBERON:0000079!5.39e-07!22;UBERON:0002417!5.47e-07!61;UBERON:0000916!5.47e-07!61;UBERON:0002530!9.42e-07!59 | ||
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| ||
|short_description=p1@GRB7 | |short_description=p1@GRB7 | ||
}} | }} |
Revision as of 17:42, 17 November 2012
Short description: | p1@GRB7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_GRB7_5end |
Coexpression cluster: | C3629_clear_serous_papillotubular_testicular_signet_breast_esophagus |
Association with transcript: | 0bp_to_ENST00000394211, NM_001030002, uc002hss.2_5end |
EntrezGene: | GRB7 |
HGNC: | 4567 |
UniProt: | Q14451 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.64e-41 | 253 |
endodermal cell | 4.45e-21 | 58 |
endo-epithelial cell | 8.42e-21 | 42 |
kidney tubule cell | 6.71e-10 | 10 |
nephron tubule epithelial cell | 6.71e-10 | 10 |
epithelial cell of alimentary canal | 1.01e-09 | 20 |
germ line cell | 9.52e-08 | 7 |
germ cell | 9.52e-08 | 7 |
respiratory epithelial cell | 1.46e-07 | 13 |
general ecto-epithelial cell | 2.93e-07 | 14 |
kidney cell | 4.40e-07 | 17 |
kidney epithelial cell | 4.40e-07 | 17 |
embryonic stem cell | 4.85e-07 | 5 |
epithelial cell of nephron | 5.22e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.12e-29 | 106 |
cell type cancer | 3.61e-20 | 143 |
adenocarcinoma | 1.91e-12 | 25 |
squamous cell carcinoma | 2.78e-10 | 14 |
cancer | 8.40e-07 | 235 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.