FF:11290-117A3: Difference between revisions

Revision as of 20:29, 9 July 2012

Name:	Smooth Muscle Cells - Umbilical Artery, donor1
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	umbilical artery
dev stage	infant
sex	female
age	neonatal
cell type	smooth muscle cell
cell line	NA
company	Cell Applications
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	1222
catalog number	CA252-R10n
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.178
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.217
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.419
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	-9.645669e-4
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.36
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.386
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.148
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.232
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.151
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0.0802
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.0167
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0.0802
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.107
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.00575
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.148
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.148
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.472
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.95
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.304
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.384
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11091

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.212
MA0003.1	MA0003.1	0.277
MA0004.1	MA0004.1	0.484
MA0006.1	MA0006.1	0.201
MA0007.1	MA0007.1	0.14
MA0009.1	MA0009.1	0.154
MA0014.1	MA0014.1	0.915
MA0017.1	MA0017.1	0.508
MA0018.2	MA0018.2	0.00426
MA0019.1	MA0019.1	0.303
MA0024.1	MA0024.1	6.40844e-8
MA0025.1	MA0025.1	0.336
MA0027.1	MA0027.1	0.729
MA0028.1	MA0028.1	0.915
MA0029.1	MA0029.1	0.124
MA0030.1	MA0030.1	0.709
MA0031.1	MA0031.1	0.162
MA0035.2	MA0035.2	0.2
MA0038.1	MA0038.1	0.237
MA0039.2	MA0039.2	0.927
MA0040.1	MA0040.1	0.535
MA0041.1	MA0041.1	0.343
MA0042.1	MA0042.1	0.659
MA0043.1	MA0043.1	0.057
MA0046.1	MA0046.1	0.919
MA0047.2	MA0047.2	0.681
MA0048.1	MA0048.1	0.172
MA0050.1	MA0050.1	1.31471e-9
MA0051.1	MA0051.1	0.00519
MA0052.1	MA0052.1	0.376
MA0055.1	MA0055.1	0.36
MA0057.1	MA0057.1	0.332
MA0058.1	MA0058.1	0.241
MA0059.1	MA0059.1	0.343
MA0060.1	MA0060.1	0.00794
MA0061.1	MA0061.1	0.395
MA0062.2	MA0062.2	0.172
MA0065.2	MA0065.2	0.301
MA0066.1	MA0066.1	0.152
MA0067.1	MA0067.1	0.0366
MA0068.1	MA0068.1	0.99
MA0069.1	MA0069.1	0.883
MA0070.1	MA0070.1	0.72
MA0071.1	MA0071.1	0.773
MA0072.1	MA0072.1	0.229
MA0073.1	MA0073.1	0.36
MA0074.1	MA0074.1	0.236
MA0076.1	MA0076.1	0.608
MA0077.1	MA0077.1	0.0671
MA0078.1	MA0078.1	0.142
MA0079.2	MA0079.2	0.872
MA0080.2	MA0080.2	0.00343
MA0081.1	MA0081.1	0.182
MA0083.1	MA0083.1	2.68064e-10
MA0084.1	MA0084.1	0.68
MA0087.1	MA0087.1	0.789
MA0088.1	MA0088.1	0.424
MA0090.1	MA0090.1	0.00124
MA0091.1	MA0091.1	0.337
MA0092.1	MA0092.1	0.0358
MA0093.1	MA0093.1	0.449
MA0099.2	MA0099.2	3.02487e-15
MA0100.1	MA0100.1	0.161
MA0101.1	MA0101.1	0.341
MA0102.2	MA0102.2	0.0424
MA0103.1	MA0103.1	0.278
MA0104.2	MA0104.2	0.208
MA0105.1	MA0105.1	0.352
MA0106.1	MA0106.1	0.00805
MA0107.1	MA0107.1	0.151
MA0108.2	MA0108.2	5.51589e-5
MA0111.1	MA0111.1	0.0595
MA0112.2	MA0112.2	0.0126
MA0113.1	MA0113.1	0.229
MA0114.1	MA0114.1	0.646
MA0115.1	MA0115.1	0.407
MA0116.1	MA0116.1	0.586
MA0117.1	MA0117.1	0.639
MA0119.1	MA0119.1	0.115
MA0122.1	MA0122.1	0.807
MA0124.1	MA0124.1	0.343
MA0125.1	MA0125.1	0.986
MA0131.1	MA0131.1	0.416
MA0135.1	MA0135.1	0.446
MA0136.1	MA0136.1	0.189
MA0137.2	MA0137.2	0.0596
MA0138.2	MA0138.2	0.686
MA0139.1	MA0139.1	0.65
MA0140.1	MA0140.1	0.188
MA0141.1	MA0141.1	0.771
MA0142.1	MA0142.1	0.722
MA0143.1	MA0143.1	0.93
MA0144.1	MA0144.1	0.851
MA0145.1	MA0145.1	0.113
MA0146.1	MA0146.1	0.315
MA0147.1	MA0147.1	0.527
MA0148.1	MA0148.1	0.327
MA0149.1	MA0149.1	0.479
MA0150.1	MA0150.1	0.0339
MA0152.1	MA0152.1	0.851
MA0153.1	MA0153.1	0.973
MA0154.1	MA0154.1	0.246
MA0155.1	MA0155.1	0.0708
MA0156.1	MA0156.1	0.776
MA0157.1	MA0157.1	0.604
MA0159.1	MA0159.1	0.544
MA0160.1	MA0160.1	0.708
MA0162.1	MA0162.1	0.0228
MA0163.1	MA0163.1	0.0158
MA0164.1	MA0164.1	0.756
MA0258.1	MA0258.1	0.162
MA0259.1	MA0259.1	0.904

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11091

Novel motif	Logo	P-value
1	1	0.602
10	10	0.449
100	100	0.918
101	101	0.392
102	102	0.816
103	103	0.266
104	104	0.397
105	105	0.64
106	106	0.0158
107	107	0.0302
108	108	0.438
109	109	0.102
11	11	0.12
110	110	0.518
111	111	0.744
112	112	0.511
113	113	0.109
114	114	0.132
115	115	0.903
116	116	0.168
117	117	0.728
118	118	0.804
119	119	0.0683
12	12	0.698
120	120	0.11
121	121	0.503
122	122	0.469
123	123	0.0103
124	124	0.379
125	125	0.829
126	126	0.815
127	127	0.561
128	128	0.145
129	129	0.989
13	13	0.991
130	130	0.548
131	131	0.0788
132	132	0.906
133	133	0.885
134	134	0.177
135	135	0.0216
136	136	0.853
137	137	0.631
138	138	0.236
139	139	0.0832
14	14	0.621
140	140	0.483
141	141	0.152
142	142	0.869
143	143	0.00956
144	144	0.598
145	145	0.189
146	146	0.302
147	147	0.206
148	148	0.818
149	149	0.121
15	15	0.421
150	150	0.0797
151	151	0.484
152	152	0.0233
153	153	0.605
154	154	0.896
155	155	0.0529
156	156	0.789
157	157	0.441
158	158	0.0537
159	159	0.362
16	16	0.205
160	160	0.0915
161	161	0.945
162	162	0.435
163	163	0.712
164	164	0.472
165	165	0.586
166	166	0.915
167	167	0.628
168	168	0.48
169	169	0.0701
17	17	0.0911
18	18	0.0983
19	19	0.129
2	2	0.34
20	20	0.534
21	21	0.797
22	22	0.203
23	23	0.0487
24	24	0.0927
25	25	0.496
26	26	0.676
27	27	0.724
28	28	0.416
29	29	0.308
3	3	0.439
30	30	0.594
31	31	0.372
32	32	2.73488e-4
33	33	0.487
34	34	0.482
35	35	0.493
36	36	0.477
37	37	0.054
38	38	0.914
39	39	0.42
4	4	0.333
40	40	0.185
41	41	0.302
42	42	0.587
43	43	0.31
44	44	0.713
45	45	0.342
46	46	0.218
47	47	0.335
48	48	0.224
49	49	0.498
5	5	0.487
50	50	0.479
51	51	0.889
52	52	0.416
53	53	0.48
54	54	0.777
55	55	0.569
56	56	0.385
57	57	0.276
58	58	0.589
59	59	0.116
6	6	0.981
60	60	0.375
61	61	0.906
62	62	0.83
63	63	0.14
64	64	0.52
65	65	0.353
66	66	0.687
67	67	0.342
68	68	0.205
69	69	0.624
7	7	0.994
70	70	0.0861
71	71	0.41
72	72	0.662
73	73	0.0109
74	74	0.954
75	75	0.357
76	76	0.458
77	77	0.0253
78	78	0.487
79	79	0.317
8	8	0.0853
80	80	0.376
81	81	0.652
82	82	0.274
83	83	0.979
84	84	0.786
85	85	0.0857
86	86	0.76
87	87	0.0187
88	88	0.0874
89	89	0.0661
9	9	0.268
90	90	0.993
91	91	0.743
92	92	0.338
93	93	0.291
94	94	0.74
95	95	0.295
96	96	0.908
97	97	0.402
98	98	0.457
99	99	0.00219

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11091

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
CL:0002594 smooth muscle cell of the umbilical artery
EFO:0002091 biological replicate
FF:0000167 smooth muscle cell sample
FF:0000210 human sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002371 (somatic cell)
0000393 (electrically responsive cell)
0000183 (contractile cell)
0000187 (muscle cell)
0000192 (smooth muscle cell)
0000211 (electrically active cell)
0000255 (eukaryotic cell)
0000359 (vascular associated smooth muscle cell)
0002594 (smooth muscle cell of the umbilical artery)

UBERON: Anatomy
0000468 (multi-cellular organism)
0001637 (artery)
0000483 (epithelium)
0000479 (tissue)
0000055 (vessel)
0004111 (anatomical conduit)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0003914 (epithelial tube)
0000025 (tube)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000119 (cell layer)
0010260 (umbilical blood vessel)
0003509 (arterial blood vessel)
0007500 (epithelial tube open at both ends)
0001981 (blood vessel)
0002049 (vasculature)
0010317 (germ layer / neural crest derived structure)
0007798 (vascular system)
0001310 (umbilical artery)
0004535 (cardiovascular system)
0004572 (arterial system)
0004537 (blood vasculature)
0001009 (circulatory system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000167 (smooth muscle cell sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000355 (multi-potent skeletal muscle stem cell)
CL:0000222 (mesodermal cell)
CL:0000514 (smooth muscle myoblast)

@@ Line 10: / Line 10: @@
 |def=
 |expression_enrichment_score=chr8:55370487..55370503,+!p1@SOX17!1.97!92.32!SOX17;;chr11:34642612..34642646,+!p1@EHF!1.62!40.58!EHF;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.43!25.97!ZBED1;;chr11:46299199..46299233,+!p1@CREB3L1!1.42!125.20!CREB3L1;;chr16:86600426..86600441,+!p1@FOXC2!1.29!45.45!FOXC2;;chr11:46299539..46299620,+!p2@CREB3L1!1.16!22.93!CREB3L1;;chr4:81118647..81118666,+!p1@PRDM8!1.16!17.65!PRDM8;;chr12:54380404..54380433,+!p3@HOXC10!1.11!11.97!HOXC10;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.11!11.97!HOXC5;;chr6:34204921..34204939,+!p3@HMGA1!1.08!332.37!HMGA1;;chr7:1577899..1577943,+!p3@MAFK!1.08!11.16!MAFK;;chr12:54378923..54378966,+!p1@HOXC10!1.08!11.16!HOXC10;;chr18:19749541..19749557,+!p1@GATA6!1.05!32.47!GATA6;;chr1:151032860..151032918,+!p1@MLLT11!1.04!118.50!MLLT11;;chr12:66218255..66218304,+!p3@HMGA2!1.04!27.39!HMGA2;;chr12:66218598..66218645,+!p2@HMGA2!1.01!43.22!HMGA2;;chr7:27224842..27224872,-!p1@HOXA11!1.01!9.13!HOXA11;;chr4:174450089..174450153,-!p2@HAND2!1.01!9.13!HAND2;;chr17:46682321..46682362,-!p1@HOXB6!1.00!8.93!HOXB6;;chr18:19749386..19749404,+!p2@GATA6!0.99!12.58!GATA6;;chr4:111558135..111558198,-!p2@PITX2!0.99!8.73!PITX2;;chr12:66218836..66218888,+!p1@HMGA2!0.98!81.77!HMGA2;;chr9:35732647..35732678,+!p2@CREB3!0.98!48.50!CREB3;;chr7:27224795..27224840,-!p2@HOXA11!0.97!8.32!HOXA11;;chr5:72744594..72744609,-!p1@FOXD1!0.93!35.31!FOXD1;;chr9:35732514..35732530,+!p5@CREB3!0.93!10.96!CREB3;;chr4:111544219..111544240,-!p1@PITX2!0.92!7.30!PITX2;;chr12:54380036..54380091,+!p4@HOXC10!0.92!7.30!HOXC10;;chr5:72744445..72744466,-!p2@FOXD1!0.91!12.17!FOXD1;;chr1:151032922..151032951,+!p2@MLLT11!0.91!11.97!MLLT11;;chr12:54393880..54393962,+!p1@HOXC9!0.91!7.10!HOXC9;;chr12:54402745..54402788,+!p1@HOXC8!0.90!6.90!HOXC8;;chr11:61520075..61520136,+!p1@C11orf9!0.88!14.61!C11orf9;;chr12:26277817..26277863,-!p2@BHLHE41!0.87!8.93!BHLHE41;;chr1:8938709..8938720,-!p3@ENO1!0.86!317.15!ENO1;;chr17:46688334..46688385,-!p1@HOXB7!0.86!9.33!HOXB7;;chr6:134210243..134210257,+!p1@TCF21!0.86!6.29!TCF21;;chr1:37940170..37940190,+!p1@ZC3H12A!0.85!79.95!ZC3H12A;;chr16:86600870..86600921,+!p2@FOXC2!0.85!6.09!FOXC2;;chr19:42636586..42636607,-!p1@POU2F2!0.84!17.25!POU2F2;;chr11:65686732..65686756,+!p2@DRAP1!0.83!26.18!DRAP1;;chr11:65686802..65686818,+!p6@DRAP1!0.83!10.35!DRAP1;;chr11:65687362..65687436,+!p3@DRAP1!0.82!27.60!DRAP1;;chr17:46687959..46688007,-!p2@HOXB7!0.82!7.91!HOXB7;;chr11:34642656..34642667,+!p2@EHF!0.81!5.48!EHF;;chr12:54380112..54380126,+!p5@HOXC10!0.81!5.48!HOXC10;;chr7:27205106..27205134,-!p2@HOXA9!0.81!5.48!HOXA9;;chr7:150945865..150945896,-!p4@SMARCD3!0.80!5.28!SMARCD3;;chr4:174451370..174451387,-!p1@HAND2!0.80!5.28!HAND2;;chr10:94449703..94449718,+!p1@HHEX!0.77!20.49!HHEX;;chr7:35293685..35293718,-!p1@TBX20!0.77!4.87!TBX20;;chr17:59477233..59477263,+!p1@TBX2!0.76!16.03!TBX2;;chr12:124873357..124873401,-!p1@NCOR2!0.75!59.05!NCOR2;;chr5:134369905..134369972,-!p1@PITX1!0.75!7.51!PITX1;;chr20:30433396..30433414,-!p1@FOXS1!0.75!4.67!FOXS1;;chr19:45908292..45908374,-!p1@PPP1R13L!0.74!44.23!PPP1R13L;;chr12:27485762..27485776,+!p3@ARNTL2!0.74!13.19!ARNTL2;;chr12:66218904..66218913,+!p11@HMGA2!0.74!4.46!HMGA2;;chr17:3571863..3571881,-!p1@TAX1BP3!0.72!341.50!TAX1BP3;;chr11:65667846..65667868,-!p1@FOSL1!0.72!127.02!FOSL1;;chr12:54366975..54367001,+!p1@HOXC11!0.72!4.26!HOXC11;;chr11:65667884..65667895,-!p2@FOSL1!0.71!17.65!FOSL1;;chr12:80085061..80085119,-!p6@PAWR!0.71!6.90!PAWR;;chr3:141087562..141087594,+!p12@ZBTB38!0.70!4.06!ZBTB38;;chr3:25469724..25469773,+!p1@RARB!0.69!5.88!RARB;;chr11:46299443..46299459,+!p4@CREB3L1!0.67!3.65!CREB3L1;;chr2:19558373..19558392,-!p1@OSR1!0.66!10.96!OSR1;;chr15:83953397..83953425,-!p1@BNC1!0.66!4.26!BNC1;;chr12:26277956..26277980,-!p1@BHLHE41!0.65!14.20!BHLHE41;;chr5:72744562..72744573,-!p3@FOXD1!0.65!4.46!FOXD1;;chr2:176969228..176969260,+!p1@HOXD11!0.65!3.45!HOXD11;;chr1:8938736..8938756,-!p1@ENO1!0.64!4409.04!ENO1;;chr20:42543441..42543497,+!p1@TOX2!0.64!17.65!TOX2;;chr6:34204973..34204990,+!p4@HMGA1!0.63!51.13!HMGA1;;chr20:42543506..42543549,+!p2@TOX2!0.63!8.93!TOX2;;chr1:151032782..151032801,+!p4@MLLT11!0.63!7.30!MLLT11;;chr2:5832508..5832524,+!p1@SOX11!0.63!3.25!SOX11;;chr12:54379029..54379057,+!p2@HOXC10!0.63!3.25!HOXC10;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.63!3.25!HOXC5;;chr9:35732592..35732640,+!p1@CREB3!0.62!50.12!CREB3;;chr21:30671690..30671762,+!p2@BACH1!0.62!12.38!BACH1;;chr2:239756739..239756755,+!p2@TWIST2!0.62!5.88!TWIST2;;chr12:66218378..66218401,+!p6@HMGA2!0.62!5.28!HMGA2;;chr2:71127699..71127744,+!p1@VAX2!0.61!7.10!VAX2;;chr12:66218183..66218209,+!p4@HMGA2!0.61!6.49!HMGA2;;chr2:192015701..192015743,-!p1@STAT4!0.61!4.46!STAT4;;chr12:66218923..66218934,+!p14@HMGA2!0.61!3.04!HMGA2;;chr1:8938766..8938774,-!p2@ENO1!0.60!249.78!ENO1;;chr3:141087393..141087426,+!p3@ZBTB38!0.60!14.00!ZBTB38;;chr20:50721803..50721857,-!p2@ZFP64!0.60!5.07!ZFP64;;chr6:34204672..34204692,+!p1@HMGA1!0.59!401.97!HMGA1;;chr15:96869114..96869160,+!p11@NR2F2!0.59!4.26!NR2F2;;chr17:59477275..59477286,+!p3@TBX2!0.59!4.06!TBX2;;chr9:35732561..35732587,+!p3@CREB3!0.58!14.20!CREB3;;chr8:145159846..145159889,+!p6@MAF1!0.58!4.26!MAF1;;chr11:46299186..46299195,+!p3@CREB3L1!0.58!3.25!CREB3L1;;chr12:54394309..54394336,+!p2@HOXC9!0.58!2.84!HOXC9;;chr11:65686952..65686975,+!p5@DRAP1!0.57!18.06!DRAP1;;chr8:106330656..106330684,+!p1@ZFPM2!0.57!8.32!ZFPM2;;chr2:239756671..239756732,+!p1@TWIST2!0.56!10.15!TWIST2;;chr12:26277929..26277955,-!p3@BHLHE41!0.56!4.06!BHLHE41;;chr19:45260775..45260838,+!p5@BCL3!0.56!3.65!BCL3;;chr1:170632285..170632309,+!p1@PRRX1!0.56!3.04!PRRX1;;chr7:27205136..27205164,-!p1@HOXA9!0.56!2.64!HOXA9;;chr8:55370720..55370733,+!p2@SOX17!0.56!2.64!SOX17;;chr22:38598086..38598105,+!p1@MAFF!0.55!33.89!MAFF;;chr12:27485823..27485868,+!p2@ARNTL2!0.55!12.58!ARNTL2;;chr12:66218212..66218244,+!p5@HMGA2!0.55!4.06!HMGA2;;chr11:65687158..65687216,+!p4@DRAP1!0.54!17.65!DRAP1;;chr12:125002827..125002855,-!p5@NCOR2!0.54!3.86!NCOR2;;chr15:67418119..67418162,+!p5@SMAD3!0.54!2.84!SMAD3;;chr15:67458491..67458505,+!p18@SMAD3!0.54!2.43!SMAD3;;chr16:86612320..86612394,+!p1@FOXL1!0.54!2.43!FOXL1;;chr12:54367012..54367025,+!p5@HOXC11!0.54!2.43!HOXC11;;chr12:54402790..54402805,+!p2@HOXC8!0.54!2.43!HOXC8;;chr12:80085120..80085156,-!p14@PAWR!0.54!2.43!PAWR;;chr7:44143925..44143970,+!p1@AEBP1!0.53!68.79!AEBP1;;chr12:57504975..57505019,-!p2@STAT6!0.53!11.97!STAT6;;chr18:19749517..19749531,+!p3@GATA6!0.53!4.87!GATA6;;chr8:145159277..145159282,+!p7@MAF1!0.53!4.06!MAF1;;chr12:124873852..124873881,-!p3@NCOR2!0.52!17.65!NCOR2;;chr1:170632959..170632987,+!p4@PRRX1!0.52!2.64!PRRX1;;chr3:178789522..178789564,-!p2@ZMAT3!0.51!21.10!ZMAT3;;chr3:39195037..39195069,-!p2@CSRNP1!0.51!17.65!CSRNP1;;chr9:16705069..16705086,-!p3@BNC2!0.51!2.23!BNC2;;chr17:41622925..41622976,-!p3@ETV4!0.50!3.65!ETV4;;chr3:52001426..52001447,-!p3@PCBP4!0.49!7.30!PCBP4;;chr12:125002739..125002756,-!p6@NCOR2!0.49!3.45!NCOR2;;chr8:72756267..72756296,-!p4@MSC!0.49!3.45!MSC;;chr12:77459306..77459365,-!p1@E2F7!0.48!33.68!E2F7;;chr12:27485785..27485816,+!p1@ARNTL2!0.48!18.67!ARNTL2;;chr12:66218573..66218596,+!p7@HMGA2!0.48!3.45!HMGA2;;chr16:67881588..67881612,-!p2@CENPT!0.48!3.04!CENPT;;chr12:66218443..66218461,+!p8@HMGA2!0.48!2.84!HMGA2;;chr6:85473156..85473210,-!p2@TBX18!0.48!2.64!TBX18;;chr6:43140149..43140177,+!p8@SRF!0.48!2.23!SRF;;chr7:27153454..27153469,-!p2@HOXA3!0.48!2.03!HOXA3;;chr7:27196267..27196311,-!p1@HOXA7!0.48!2.03!HOXA7;;chr8:40755333..40755352,-!p1@ZMAT4!0.48!2.03!ZMAT4;;chr11:65429891..65429915,-!p7@RELA!0.48!2.03!RELA;;chr12:54366949..54366973,+!p3@HOXC11!0.48!2.03!HOXC11;;chr3:25469815..25469866,+!p3@RARB!0.48!2.03!RARB;;chr3:71355163..71355209,-!p5@FOXP1!0.47!3.04!FOXP1;;chr15:67418047..67418093,+!p4@SMAD3!0.47!2.64!SMAD3;;chr2:121493425..121493474,+!p1@GLI2!0.46!5.07!GLI2;;chr8:72756063..72756125,-!p1@MSC!0.46!4.67!MSC;;chr12:66218003..66218018,+!p9@HMGA2!0.46!2.43!HMGA2;;chr17:3571887..3571918,-!p2@TAX1BP3!0.45!28.00!TAX1BP3;;chr7:26191809..26191890,+!p1@NFE2L3!0.45!12.17!NFE2L3;;chr6:85474299..85474324,-!p1@TBX18!0.45!3.86!TBX18;;chr19:13134457..13134462,+!p5@NFIX!0.45!3.86!NFIX;;chr12:125002861..125002894,-!p7@NCOR2!0.45!3.04!NCOR2;;chr12:115122318..115122331,-!p2@TBX3!0.45!1.83!TBX3;;chr14:37131058..37131139,+!p1@PAX9!0.45!1.83!PAX9;;chr5:139492456..139492489,+!p7@PURA!0.45!1.83!PURA;;chr7:27169801..27169844,-!p2@HOXA4!0.45!1.83!HOXA4;;chr15:96869165..96869183,+!p20@NR2F2!0.45!1.83!NR2F2;;chr17:8027418..8027432,-!p1@HES7!0.45!1.83!HES7;;chr2:192015750..192015793,-!p2@STAT4!0.44!2.64!STAT4;;chr5:72743793..72743855,-!p4@FOXD1!0.44!2.23!FOXD1;;chr3:101568349..101568365,+!p1@NFKBIZ!0.43!129.05!NFKBIZ;;chr2:145275162..145275202,-!p2@ZEB2!0.43!14.00!ZEB2;;chr19:56152332..56152347,+!p4@ZNF580!0.43!4.87!ZNF580;;chr3:52001448..52001478,-!p2@PCBP4!0.42!33.07!PCBP4;;chr8:145159447..145159458,+!p4@MAF1!0.42!5.07!MAF1;;chr3:168864315..168864339,-!p2@MECOM!0.42!3.25!MECOM;;chr15:96869222..96869251,+!p18@NR2F2!0.42!2.03!NR2F2;;chr15:67418099..67418118,+!p16@SMAD3!0.42!1.62!SMAD3;;chr16:31076332..31076388,-!p3@ZNF668!0.42!1.62!ZNF668;;chr2:237077022..237077038,-!p1@GBX2!0.42!1.62!GBX2;;chr3:25470156..25470227,+!p2@RARB!0.42!1.62!RARB;;chr11:128563652..128563689,+!p3@FLI1!0.42!1.62!FLI1;;chr11:46333934..46333963,+!p5@CREB3L1!0.42!1.62!CREB3L1;;chr12:54378864..54378884,+!p6@HOXC10!0.42!1.62!HOXC10;;chr12:54379136..54379150,+!p4@HOXC5!0.42!1.62!HOXC5;;chr12:54379477..54379498,+!p5@HOXC5!0.42!1.62!HOXC5;;chr12:54394059..54394088,+!p3@HOXC9!0.42!1.62!HOXC9;;chr7:1577952..1577963,+!p8@MAFK!0.42!1.62!MAFK;;chr19:47523058..47523114,+!p1@NPAS1!0.42!1.62!NPAS1;;chr2:101436564..101436647,+!p1@NPAS2!0.41!47.68!NPAS2;;chr3:39195075..39195088,-!p1@CSRNP1!0.41!14.00!CSRNP1;;chr1:170633348..170633399,+!p2@PRRX1!0.41!2.43!PRRX1;;chr8:72756213..72756243,-!p5@MSC!0.41!2.23!MSC;;chr11:65687222..65687240,+!p7@DRAP1!0.41!2.23!DRAP1;;chr12:26278008..26278024,-!p4@BHLHE41!0.41!2.03!BHLHE41;;chr12:27485889..27485900,+!p4@AR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+|ffid_belonging_in_development=CL:0000355,CL:0000222,CL:0000514
 |fonse_cell_line=
 |fonse_cell_line_closure=

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FF:11290-117A3: Difference between revisions

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Revision as of 20:29, 9 July 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0