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FFCP PHASE1:Mm9::chr1:195027588..195027611,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=215243
|EntrezGene=215243
|HGNC=
|HGNC=
|MCL_coexpression_id=3
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=37bp_to_ENSMUST00000161403_5end
|association_with_transcript=37bp_to_ENSMUST00000161403_5end
|cluster_id=chr1:195027588..195027611,-
|description=CAGE_peak_3_at_Traf3ip3_5end
|description=CAGE_peak_3_at_Traf3ip3_5end
|id=chr1:195027588..195027611,-
|id=chr1:195027588..195027611,-
|ontology_enrichment_celltype=CL:0000988!8.61e-13!32;CL:0002032!8.61e-13!32;CL:0000037!8.61e-13!32;CL:0000566!8.61e-13!32;CL:0000837!8.61e-13!32;CL:0000838!8.25e-10!12;CL:0000542!9.67e-10!13;CL:0000051!9.67e-10!13;CL:0002031!1.48e-09!25;CL:0000084!5.64e-09!11;CL:0000827!5.64e-09!11;CL:0000738!2.95e-08!17;CL:0002087!2.95e-08!17;CL:0000791!1.31e-07!9;CL:0000789!1.31e-07!9;CL:0002420!1.31e-07!9;CL:0002419!1.31e-07!9;CL:0000790!1.31e-07!9;CL:0000624!7.63e-07!8
|ontology_enrichment_celltype=CL:0000988!8.61e-13!32;CL:0002032!8.61e-13!32;CL:0000037!8.61e-13!32;CL:0000566!8.61e-13!32;CL:0000837!8.61e-13!32;CL:0000838!8.25e-10!12;CL:0000542!9.67e-10!13;CL:0000051!9.67e-10!13;CL:0002031!1.48e-09!25;CL:0000084!5.64e-09!11;CL:0000827!5.64e-09!11;CL:0000738!2.95e-08!17;CL:0002087!2.95e-08!17;CL:0000791!1.31e-07!9;CL:0000789!1.31e-07!9;CL:0002420!1.31e-07!9;CL:0002419!1.31e-07!9;CL:0000790!1.31e-07!9;CL:0000624!7.63e-07!8
|ontology_enrichment_celltype_v019_2=CL:0000988,1.63e-18,32;CL:0002032,1.63e-18,32;CL:0000037,1.63e-18,32;CL:0000837,1.63e-18,32;CL:0000838,2.00e-17,12;CL:0000542,7.82e-16,13;CL:0000051,7.82e-16,13;CL:0000084,8.02e-16,11;CL:0000827,8.02e-16,11;CL:0002031,5.14e-15,25;CL:0000791,3.34e-13,9;CL:0000789,3.34e-13,9;CL:0002420,3.34e-13,9;CL:0002419,3.34e-13,9;CL:0000790,3.34e-13,9;CL:0000624,9.78e-12,8;CL:0000738,2.37e-11,17;CL:0002087,2.37e-11,17;CL:0002320,5.47e-11,46;CL:0000134,5.47e-11,46;CL:0000893,8.39e-09,6;CL:0002489,8.39e-09,6;CL:0000898,8.39e-09,6;CL:0000809,8.39e-09,6;CL:0000810,8.39e-09,6;CL:0000895,8.39e-09,6;CL:0000808,8.39e-09,6;CL:0000894,8.39e-09,6;CL:0000806,8.39e-09,6;CL:0000807,8.39e-09,6;CL:0000805,8.39e-09,6;CL:0002425,8.39e-09,6;CL:0002436,8.39e-09,6;CL:0002427,8.39e-09,6;CL:0002428,8.39e-09,6;CL:0002429,8.39e-09,6;CL:0002433,8.39e-09,6;CL:0002431,8.39e-09,6;CL:0002432,8.39e-09,6;CL:0000219,1.70e-08,54;CL:0000553,6.74e-07,6;CL:0000556,6.74e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002193!6.52e-18!48;UBERON:0002405!1.43e-16!70;UBERON:0002390!1.09e-15!45;UBERON:0003061!1.09e-15!45;UBERON:0004177!1.95e-13!29;UBERON:0005057!1.64e-11!51;UBERON:0003408!1.62e-10!24;UBERON:0002370!4.79e-10!23;UBERON:0000974!4.79e-10!23;UBERON:0004807!4.79e-10!23;UBERON:0005058!4.79e-10!23;UBERON:0003351!4.79e-10!23;UBERON:0009113!4.79e-10!23;UBERON:0003295!4.79e-10!23;UBERON:0009722!4.79e-10!23;UBERON:0005562!4.79e-10!23;UBERON:0007690!4.79e-10!23;UBERON:0006562!2.79e-09!24;UBERON:0001557!2.79e-09!24;UBERON:0001042!2.79e-09!24;UBERON:0008814!2.79e-09!24;UBERON:0009145!2.79e-09!24;UBERON:0001004!1.09e-08!42;UBERON:0000065!2.82e-08!41;UBERON:0000072!2.26e-07!27;UBERON:0003081!4.53e-07!88
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.53e-25,48;UBERON:0002405,5.53e-25,48;UBERON:0002390,4.22e-21,45;UBERON:0003061,4.22e-21,45;UBERON:0004177,1.58e-19,29;UBERON:0005057,1.58e-19,29;UBERON:0003408,1.44e-15,24;UBERON:0000077,4.01e-15,35;UBERON:0002370,1.08e-14,23;UBERON:0000974,1.08e-14,23;UBERON:0004807,1.08e-14,23;UBERON:0005058,1.08e-14,23;UBERON:0003351,1.08e-14,23;UBERON:0009113,1.08e-14,23;UBERON:0003295,1.08e-14,23;UBERON:0009722,1.08e-14,23;UBERON:0005562,1.08e-14,23;UBERON:0007690,1.08e-14,23;UBERON:0006562,6.86e-14,24;UBERON:0001557,6.86e-14,24;UBERON:0001042,6.86e-14,24;UBERON:0008814,6.86e-14,24;UBERON:0009145,6.86e-14,24;UBERON:0000072,7.61e-12,27;UBERON:0002384,5.47e-11,46;UBERON:0001004,7.66e-11,42;UBERON:0000065,3.81e-10,41;UBERON:0001041,5.09e-10,80;UBERON:0007811,8.15e-09,36;UBERON:0003081,1.03e-08,87;UBERON:0000490,8.85e-08,66;UBERON:0005911,3.02e-07,69;UBERON:0003929,3.36e-07,55
|phase1_expression=0,0,0,0,0,0,0,12.2667157269497,4.36445038670167,9.12851652655775,1.19852577757853,1.43589886191606,3.93761678841773,5.76974655965383,1.33243904726265,4.25198061518635,0.699561878128147,16.7194947639866,18.373334103169,17.8243653755173,0.340173160604279,5.06383851124515,2.87319768052829,6.07971206614945,4.5881856213434,0,0,0,0,0.504060259519861,0,0,0,0,0,0,0,43.1087579659015,29.6907430919044,35.0760908462445,54.1172968988533,54.6436387966757,34.9567454182431,0,0,0,0,0,0,0,0,0,31.8786951509699,7.25362142011344,8.73843877770406,0,0,0,0,0,0,0,0,0,0,0,0.599200221036809,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.91347103775248,15.5362730188303,0.148442139064825,0,0,0.230615497256059,0,0.352766121407114,0.125666591329675,0,0.144599356919912,0.884610551949874,0.323533699894818,2.42925670306433,1.93950101254089,0,0,0,0.766371165625774,1.91704199209472,1.19980546198682,2.92261522268049,0.149790639404823,0,0,0,0,0,0,0.101839363850316,0.870848794270651,0,0,0.130120442962704,0,0,0,0,0,0,0,0.215567992932842,0.189106080167819,0,0,0,0,0,0,0.702213187313235,1.02939162845886,4.26245249093389,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0.146199987425332,0.658650345873152,0,0,0,0.660837565967596,0.793351699990633,0.213288250535234,0,0.644337306610467,0.201683524623343,0.22237804384487,0.380451252225118,0.474529061544512,0.164698954724011,0,0,0.38992817423824,0.898819408654221,0.432276099749388,0.199141273254367,0.189667900953082,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0,0,0.500535317148282,0,0.224862112384854,0.202860121388503,0.964708639009667,1.78238096246994,1.43848068725405,1.78348749452539,0.549122826376163,1.43768206527355,1.48856379067401,0.312037673114561,0,0,0.482443521363367,1.29327233116623,0,0,0.169745085775188,0,0.502518772325447,0,0.195133647857799,0.315270288212382,0.221464689648775,0.478364305972461,1.14704320301017,1.20879487306127,1.44649058581512,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.164970122972535,0,0,0.302323556964751,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0.874442509889552,0.18542530201051,3.58828849675491,0.412773735926445,1.29636169158798,2.82552685507037,3.8274383761887,4.11800711771741,1.69978429993855,2.09927178485487,1.52019971184866,0,0,0,0,0,0,0,0,0,0,1.24267862617385,0,0,0.165458490457098,0,0.258319646955462,0,0.234714477291508,0,0,0,0,1.26404448251271,0.405450430580328,0.718976700153791,0.77952493786677,1.9692936523423,2.58285761215644,2.28371354087941,3.10148007066612,1.9183625490148,1.905170166375,2.72230699869469,3.02119430293232,4.13710919053417,3.50630706544707,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.243106717068294,0,0,0.222246727801615,0,0,0,0,0.188626341386076,0,0.128050304809739,0.0574354689556133,0,0.231768651889711,0.38581844092741,0,0,0,0.177475806159338,0,0.290692833264657,0.0941093804153306,0.169229215783353,0.365855945745545,0,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0.214871054048298,0.382576664137687,0.441182838239031,0.927471342481686
|phase1_expression=0,0,0,0,0,0,0,12.2667157269497,4.36445038670167,9.12851652655775,1.19852577757853,1.43589886191606,3.93761678841773,5.76974655965383,1.33243904726265,4.25198061518635,0.699561878128147,16.7194947639866,18.373334103169,17.8243653755173,0.340173160604279,5.06383851124515,2.87319768052829,6.07971206614945,4.5881856213434,0,0,0,0,0.504060259519861,0,0,0,0,0,0,0,43.1087579659015,29.6907430919044,35.0760908462445,54.1172968988533,54.6436387966757,34.9567454182431,0,0,0,0,0,0,0,0,0,31.8786951509699,7.25362142011344,8.73843877770406,0,0,0,0,0,0,0,0,0,0,0,0.599200221036809,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.91347103775248,15.5362730188303,0.148442139064825,0,0,0.230615497256059,0,0.352766121407114,0.125666591329675,0,0.144599356919912,0.884610551949874,0.323533699894818,2.42925670306433,1.93950101254089,0,0,0,0.766371165625774,1.91704199209472,1.19980546198682,2.92261522268049,0.149790639404823,0,0,0,0,0,0,0.101839363850316,0.870848794270651,0,0,0.130120442962704,0,0,0,0,0,0,0,0.215567992932842,0.189106080167819,0,0,0,0,0,0,0.702213187313235,1.02939162845886,4.26245249093389,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0.146199987425332,0.658650345873152,0,0,0,0.660837565967596,0.793351699990633,0.213288250535234,0,0.644337306610467,0.201683524623343,0.22237804384487,0.380451252225118,0.474529061544512,0.164698954724011,0,0,0.38992817423824,0.898819408654221,0.432276099749388,0.199141273254367,0.189667900953082,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0,0,0.500535317148282,0,0.224862112384854,0.202860121388503,0.964708639009667,1.78238096246994,1.43848068725405,1.78348749452539,0.549122826376163,1.43768206527355,1.48856379067401,0.312037673114561,0,0,0.482443521363367,1.29327233116623,0,0,0.169745085775188,0,0.502518772325447,0,0.195133647857799,0.315270288212382,0.221464689648775,0.478364305972461,1.14704320301017,1.20879487306127,1.44649058581512,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.164970122972535,0,0,0.302323556964751,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0.874442509889552,0.18542530201051,3.58828849675491,0.412773735926445,1.29636169158798,2.82552685507037,3.8274383761887,4.11800711771741,1.69978429993855,2.09927178485487,1.52019971184866,0,0,0,0,0,0,0,0,0,0,1.24267862617385,0,0,0.165458490457098,0,0.258319646955462,0,0.234714477291508,0,0,0,0,1.26404448251271,0.405450430580328,0.718976700153791,0.77952493786677,1.9692936523423,2.58285761215644,2.28371354087941,3.10148007066612,1.9183625490148,1.905170166375,2.72230699869469,3.02119430293232,4.13710919053417,3.50630706544707,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.243106717068294,0,0,0.222246727801615,0,0,0,0,0.188626341386076,0,0.128050304809739,0.0574354689556133,0,0.231768651889711,0.38581844092741,0,0,0,0.177475806159338,0,0.290692833264657,0.0941093804153306,0.169229215783353,0.365855945745545,0,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0.214871054048298,0.382576664137687,0.441182838239031,0.927471342481686
|short_description=p3@Traf3ip3
|short_description=p3@Traf3ip3
}}
}}

Latest revision as of 00:38, 27 September 2015

Short description:p3@Traf3ip3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Traf3ip3_5end
Coexpression cluster:MCL_coexpression_mm9:3
Association with transcript: 37bp_to_ENSMUST00000161403_5end
EntrezGene:Traf3ip3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Traf3ip3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E912.27
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.36
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F29.13
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.20
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.44
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.94
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E85.77
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.25
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A216.72
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A418.37
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A617.82
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H25.06
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.87
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D16.08
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.59
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G843.11
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H129.69
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H335.08
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G954.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H254.64
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H434.96
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A231.88
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.25
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A18.74
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H915.54
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A62.43
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.92
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.92
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D54.26
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A31.78
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F41.78
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B11.29
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H21.45
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G23.59
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F21.30
spleen, neonate N10.CNhs11116.752-24D12.83
spleen, neonate N20.CNhs11112.824-19H13.83
spleen, neonate N25.CNhs11099.1354-25G34.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.10
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.52
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C11.97
thymus, embryo E18.CNhs10595.1273-19G42.58
thymus, neonate N02.CNhs11181.1541-43F82.28
thymus, neonate N03.CNhs11137.2104-43C73.10
thymus, neonate N06.CNhs11197.681-26C41.92
thymus, neonate N07.CNhs11211.713-19D31.91
thymus, neonate N10.CNhs11194.748-24E42.72
thymus, neonate N20.CNhs11186.820-7A23.02
thymus, neonate N25.CNhs11125.1362-25G74.14
thymus, neonate N30.CNhs11132.1393-42G23.51
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
hematopoietic cell1.63e-1832
hematopoietic oligopotent progenitor cell1.63e-1832
hematopoietic stem cell1.63e-1832
hematopoietic multipotent progenitor cell1.63e-1832
lymphoid lineage restricted progenitor cell2.00e-1712
lymphocyte7.82e-1613
common lymphoid progenitor7.82e-1613
T cell8.02e-1611
pro-T cell8.02e-1611
hematopoietic lineage restricted progenitor cell5.14e-1525
mature alpha-beta T cell3.34e-139
alpha-beta T cell3.34e-139
immature T cell3.34e-139
mature T cell3.34e-139
immature alpha-beta T cell3.34e-139
CD4-positive, alpha-beta T cell9.78e-128
leukocyte2.37e-1117
nongranular leukocyte2.37e-1117
connective tissue cell5.47e-1146
mesenchymal cell5.47e-1146
thymocyte8.39e-096
double negative thymocyte8.39e-096
naive T cell8.39e-096
double-positive, alpha-beta thymocyte8.39e-096
CD4-positive, alpha-beta thymocyte8.39e-096
naive thymus-derived CD4-positive, alpha-beta T cell8.39e-096
DN4 thymocyte8.39e-096
DN1 thymic pro-T cell8.39e-096
DN2 thymocyte8.39e-096
DN3 thymocyte8.39e-096
immature single positive thymocyte8.39e-096
early T lineage precursor8.39e-096
mature CD4 single-positive thymocyte8.39e-096
resting double-positive thymocyte8.39e-096
double-positive blast8.39e-096
CD69-positive double-positive thymocyte8.39e-096
CD69-positive, CD4-positive single-positive thymocyte8.39e-096
CD4-positive, CD8-intermediate double-positive thymocyte8.39e-096
CD24-positive, CD4 single-positive thymocyte8.39e-096
motile cell1.70e-0854
megakaryocyte progenitor cell6.74e-076
megakaryocyte6.74e-076

Uber anatomy
Ontology termp-valuen
hemolymphoid system5.53e-2548
immune system5.53e-2548
hematopoietic system4.22e-2145
blood island4.22e-2145
hemopoietic organ1.58e-1929
immune organ1.58e-1929
gland of gut1.44e-1524
mixed endoderm/mesoderm-derived structure4.01e-1535
thymus1.08e-1423
neck1.08e-1423
respiratory system epithelium1.08e-1423
hemolymphoid system gland1.08e-1423
pharyngeal epithelium1.08e-1423
thymic region1.08e-1423
pharyngeal gland1.08e-1423
entire pharyngeal arch endoderm1.08e-1423
thymus primordium1.08e-1423
early pharyngeal endoderm1.08e-1423
pharynx6.86e-1424
upper respiratory tract6.86e-1424
chordate pharynx6.86e-1424
pharyngeal arch system6.86e-1424
pharyngeal region of foregut6.86e-1424
segment of respiratory tract7.61e-1227
connective tissue5.47e-1146
respiratory system7.66e-1142
respiratory tract3.81e-1041
foregut5.09e-1080
craniocervical region8.15e-0936
lateral plate mesoderm1.03e-0887
unilaminar epithelium8.85e-0866
endo-epithelium3.02e-0769
gut epithelium3.36e-0755
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