FFCP PHASE1:Hg19::chr11:57148619..57148624,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10394 | |EntrezGene=10394 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9363 | |HGNC=9363 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y2Y8 | |UniProt=Q9Y2Y8 | ||
|association_with_transcript=0bp_to_ENST00000287143,NM_006093,uc001njv.1_5end | |association_with_transcript=0bp_to_ENST00000287143,NM_006093,uc001njv.1_5end | ||
|cluster_id=chr11:57148619..57148624,- | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_1_at_PRG3_5end | |description=CAGE_peak_1_at_PRG3_5end | ||
|id=chr11:57148619..57148624,- | |id=chr11:57148619..57148624,- | ||
|ontology_enrichment_celltype=CL:0000764!2.81e-17!2;CL:0000765!2.81e-17!2;CL:0000050!2.81e-17!2;CL:0000038!2.81e-17!2;CL:0000558!2.81e-17!2;CL:0000547!2.81e-17!2;CL:0000549!2.81e-17!2;CL:0000550!2.81e-17!2;CL:0000552!2.81e-17!2 | |ontology_enrichment_celltype=CL:0000764!2.81e-17!2;CL:0000765!2.81e-17!2;CL:0000050!2.81e-17!2;CL:0000038!2.81e-17!2;CL:0000558!2.81e-17!2;CL:0000547!2.81e-17!2;CL:0000549!2.81e-17!2;CL:0000550!2.81e-17!2;CL:0000552!2.81e-17!2 | ||
|ontology_enrichment_celltype_v019=CL:0000764;8.82e-51;2!CL:0000558;8.82e-51;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,8.82e-51,2;CL:0000765,8.82e-51,2;CL:0000050,8.82e-51,2;CL:0000038,8.82e-51,2;CL:0000558,8.82e-51,2;CL:0000547,8.82e-51,2;CL:0000549,8.82e-51,2;CL:0000550,8.82e-51,2;CL:0000552,8.82e-51,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8552!4.19e-09!1;DOID:225!5.31e-09!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!2.46e-18!7;UBERON:0002106!1.94e-11!3;UBERON:0004854!1.94e-11!3;UBERON:0009034!1.94e-11!3;UBERON:0002095!1.94e-11!3;UBERON:0004782!1.94e-11!3;UBERON:0003281!1.94e-11!3;UBERON:0009664!1.94e-11!3;UBERON:0002296!1.94e-11!3;UBERON:0005602!1.94e-11!3;UBERON:0001179!1.94e-11!3;UBERON:0006293!1.94e-11!3;UBERON:0007029!4.54e-09!1;UBERON:0002370!5.99e-09!4;UBERON:0005058!5.99e-09!4;UBERON:0009113!5.99e-09!4;UBERON:0003295!5.99e-09!4;UBERON:0005562!5.99e-09!4;UBERON:0002336!7.85e-09!1;UBERON:0001018!7.85e-09!1;UBERON:0002473!7.85e-09!1;UBERON:0005340!7.85e-09!1;UBERON:0002316!7.85e-09!1;UBERON:0003544!7.85e-09!1;UBERON:0001020!7.85e-09!1;UBERON:0005970!7.85e-09!1;UBERON:0002437!7.85e-09!1;UBERON:0000974!1.02e-07!10;UBERON:0001042!1.28e-07!10;UBERON:0009145!1.28e-07!10;UBERON:0005057!1.77e-07!26;UBERON:0006562!5.76e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;7.50e-50;2!UBERON:0005058;7.50e-50;2!UBERON:0009113;7.50e-50;2!UBERON:0004177;9.22e-45;5!UBERON:0005057;9.22e-45;5!UBERON:0000341;1.46e-13;2!UBERON:0002106;1.41e-09;3!UBERON:0000077;6.49e-09;27!UBERON:0002405;6.49e-09;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.86e-32,7;UBERON:0005057,2.86e-32,7;UBERON:0002370,1.43e-25,4;UBERON:0005058,1.43e-25,4;UBERON:0009113,1.43e-25,4;UBERON:0003295,1.43e-25,4;UBERON:0005562,1.43e-25,4;UBERON:0000974,9.33e-23,10;UBERON:0003351,2.01e-17,6;UBERON:0000341,1.55e-13,2;UBERON:0003408,7.30e-11,10;UBERON:0001042,7.30e-11,10;UBERON:0009145,7.30e-11,10;UBERON:0006562,5.79e-10,11;UBERON:0009722,5.79e-10,11;UBERON:0007690,5.79e-10,11;UBERON:0002106,1.41e-09,3;UBERON:0004854,1.41e-09,3;UBERON:0009034,1.41e-09,3;UBERON:0002095,1.41e-09,3;UBERON:0004782,1.41e-09,3;UBERON:0003281,1.41e-09,3;UBERON:0009664,1.41e-09,3;UBERON:0002296,1.41e-09,3;UBERON:0005602,1.41e-09,3;UBERON:0001179,1.41e-09,3;UBERON:0006293,1.41e-09,3;UBERON:0000077,2.39e-08,29;UBERON:0001041,2.46e-07,87;UBERON:0002368,4.88e-07,35 | |||
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|short_description=p1@PRG3 | |short_description=p1@PRG3 | ||
}} | }} |
Latest revision as of 09:09, 18 September 2015
Short description: | p1@PRG3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PRG3_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | 0bp_to_ENST00000287143, NM_006093, uc001njv.1_5end |
EntrezGene: | PRG3 |
HGNC: | 9363 |
UniProt: | Q9Y2Y8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 8.82e-51 | 2 |
erythroblast | 8.82e-51 | 2 |
megakaryocyte-erythroid progenitor cell | 8.82e-51 | 2 |
erythroid progenitor cell | 8.82e-51 | 2 |
reticulocyte | 8.82e-51 | 2 |
proerythroblast | 8.82e-51 | 2 |
basophilic erythroblast | 8.82e-51 | 2 |
polychromatophilic erythroblast | 8.82e-51 | 2 |
orthochromatic erythroblast | 8.82e-51 | 2 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 2.86e-32 | 7 |
immune organ | 2.86e-32 | 7 |
thymus | 1.43e-25 | 4 |
hemolymphoid system gland | 1.43e-25 | 4 |
thymic region | 1.43e-25 | 4 |
pharyngeal gland | 1.43e-25 | 4 |
thymus primordium | 1.43e-25 | 4 |
neck | 9.33e-23 | 10 |
pharyngeal epithelium | 2.01e-17 | 6 |
throat | 1.55e-13 | 2 |
gland of gut | 7.30e-11 | 10 |
chordate pharynx | 7.30e-11 | 10 |
pharyngeal region of foregut | 7.30e-11 | 10 |
pharynx | 5.79e-10 | 11 |
entire pharyngeal arch endoderm | 5.79e-10 | 11 |
early pharyngeal endoderm | 5.79e-10 | 11 |
spleen | 1.41e-09 | 3 |
gastrointestinal system mesentery | 1.41e-09 | 3 |
stomach region | 1.41e-09 | 3 |
mesentery | 1.41e-09 | 3 |
gastrointestinal system serosa | 1.41e-09 | 3 |
mesentery of stomach | 1.41e-09 | 3 |
gut mesentery | 1.41e-09 | 3 |
dorsal mesentery | 1.41e-09 | 3 |
dorsal mesogastrium | 1.41e-09 | 3 |
peritoneal cavity | 1.41e-09 | 3 |
spleen primordium | 1.41e-09 | 3 |
mixed endoderm/mesoderm-derived structure | 2.39e-08 | 29 |
foregut | 2.46e-07 | 87 |
endocrine gland | 4.88e-07 | 35 |