FFCP PHASE1:Hg19::chr11:111852954..111852989,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=85458 | |EntrezGene=85458 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23695 | |HGNC=23695 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=12bp_to_ENST00000524609,uc001pmn.2_5end | |association_with_transcript=12bp_to_ENST00000524609,uc001pmn.2_5end | ||
|cluster_id=chr11:111852954..111852989,+ | |||
|coexpression_cluster_id=C1607 | |||
|description=CAGE_peak_7_at_DIXDC1_5end | |description=CAGE_peak_7_at_DIXDC1_5end | ||
|id=chr11:111852954..111852989,+ | |id=chr11:111852954..111852989,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006595;2.92e-08;86!UBERON:0007297;2.04e-07;2!UBERON:0001041;3.47e-07;30 | |||
|ontology_enrichment_disease=DOID:305!7.38e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.53e-20!115;UBERON:0004921!6.35e-14!129;UBERON:0004185!6.35e-14!129;UBERON:0001007!8.45e-14!155;UBERON:0001555!8.45e-14!155;UBERON:0007026!8.45e-14!155;UBERON:0004119!1.66e-12!169;UBERON:0000925!1.66e-12!169;UBERON:0006595!1.66e-12!169;UBERON:0000466!3.94e-12!126;UBERON:0000077!1.10e-09!130;UBERON:0003135!4.87e-09!11;UBERON:0001041!6.71e-09!98;UBERON:0000481!2.22e-08!347;UBERON:0005177!2.39e-08!107;UBERON:0005911!3.33e-08!82;UBERON:0000464!4.73e-08!104;UBERON:0009497!6.89e-08!25;UBERON:0000015!6.89e-08!25;UBERON:0002423!6.89e-08!25;UBERON:0006235!6.89e-08!25;UBERON:0004161!6.89e-08!25;UBERON:0005409!3.27e-07!35;UBERON:0001048!5.92e-07!168;UBERON:0000160!9.78e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;3.93e-15;33!UBERON:0005409;6.97e-15;22!UBERON:0000160;4.67e-11;17!UBERON:0006947;2.69e-10;3!UBERON:0004054;2.69e-10;3!UBERON:0002108;1.89e-09;4!UBERON:0003135;7.89e-09;11!UBERON:0005904;8.60e-08;4!UBERON:0002365;3.07e-07;31!UBERON:0002330;3.07e-07;31!UBERON:0002368;3.28e-07;33!UBERON:0000058;3.80e-07;10!UBERON:0001829;5.33e-07;2!UBERON:0000922;6.59e-07;49!UBERON:0001041;7.57e-07;14!UBERON:0003296;8.51e-07;4!UBERON:0010133;8.51e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,2.27e-15,118;UBERON:0001007,3.92e-14,145;UBERON:0001555,3.92e-14,145;UBERON:0007026,3.92e-14,145;UBERON:0005409,7.29e-13,25;UBERON:0004119,5.48e-12,160;UBERON:0000925,5.48e-12,160;UBERON:0006595,5.48e-12,160;UBERON:0007023,1.11e-11,114;UBERON:0000160,3.60e-11,17;UBERON:0001041,8.66e-11,87;UBERON:0006947,2.69e-10,3;UBERON:0004054,2.69e-10,3;UBERON:0002108,1.47e-09,4;UBERON:0011216,2.94e-09,223;UBERON:0003135,7.57e-09,11;UBERON:0002530,1.49e-08,59;UBERON:0005904,8.61e-08,4;UBERON:0002368,2.01e-07,35;UBERON:0002365,2.82e-07,31;UBERON:0002330,2.82e-07,31;UBERON:0001829,4.97e-07,2;UBERON:0005177,4.98e-07,101;UBERON:0009856,5.68e-07,26;UBERON:0003296,9.05e-07,4;UBERON:0010133,9.05e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46368447355514,1.72288698817931,1.51052125730374,0.310983165046111,0.756962552626885,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.9430538304014,2.94848165003288,2.95394953340702,0,1.47586126251736,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0.451199612907412,0.385076685522074,0,0,0.316654886678627,0,0,0,0,0.270946437543853,0,0.254876273045038,0.831076008928724,0,0,0,0.256450125116389,0,0.650756789328606,3.60643540767028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,3.57746442951761,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43282702530686,0.146508179271894,0,0,0,0,0.890894042497916,0,0,0.140669416410513,0,0,0.422250816255987,0.796991953004279,3.03912307084262,0,0,0.123084805461069,0,0.269605053441981,0.179021174675609,0,0.690503839458535,0,0,0,0.0927680981618513,0,0,4.81029999979076,1.44999915086959,0.1137934482855,2.79679015322043,4.01859059005492,0,0,0,0,0,1.52581736317083,0,0,0,0,0.41827123283581,0.461701551022782,0,0,0.718061155278177,0.434589487688032,0,0.274792780205587,0,0,0,0,0.451191321234361,0,0.167821586975843,0,0,0.421996129056054,0.163232808159148,0.706765357169704,0,3.98104772431402,2.56526937059684,4.27721101453538,0,0,0,0.134802265961354,0,0,0,0.391329237864179,0,21.3075577538671,12.0990716048664,0,0.063186579628488,0,0,0,0,0,0,1.42304773014896,0,2.08271686002157,0,0,16.5990334829929,0,0,0,0,0.581934098930517,0.0882561266915003,0.90392296312213,0,0,0,0.977756913674015,0.0801588202515337,2.13452994739353,0,2.01726584015748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.604651252380536,0,1.16495949527454,0.236349546921671,0.0824158583811665,0.13480708770837,0,0,0,0,2.25054407851027,2.47570985875021,3.32352270423348,0,0,0.0607495566580247,0,8.5898220956126,6.55682351687476,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,2.19828350517124,3.97520666736664,0,0.26446520348538,0,0,1.81538601365081,3.30129040709298,4.14239055347196,0,0,0.730755590285376,1.27668251554036,0,0,0,0,2.04170325125305,0,0,0,0.573409195690071,0.221858103073705,0.124192805882767,0,0,0,0,0,1.40500471742064,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.588886311006154,0,0,0,0,0,0,0.150420656698515,0,10.9411961572633,0.261906694481422,0,1.77427303460454,0,0,0,0,0,10.4168975702865,1.48863353516788,0,0.511049710558381,2.14280734351315,3.02655349996942,0,2.50428410486427,0,0,0,0,0.0657727735628491,0,0,0.863424021355654,0,0,0.913158720509496,0,0,0.929195074296532,0,0,0,0,0,0,0,11.6161386881475,0,0,26.6733841620285,0.22910686854405,0,0,0,1.27595303699816,0,1.29485767437579,0.410651227424988,0,0.971421986118279,1.16969731731053,0,0,0.45178432815584,0,5.1327366812669,4.47610117026079,4.15263164957519,3.29222107453066,0.245148321753905,6.3632667717439,0,0,0,0,0,0,0,0.178553938605658,0,1.60482733378337,8.03370027071169,3.66983426723633,0,0,0.135982980381829,0,8.99345628876181,0,0,0,0.126166424835079,0.109265571963696,0,0.305966489225945,1.60330443159336,2.02168778976659,0,0.682008283964155,0.267964130156178,0,0,1.27940389140589,6.42773964952099,0.581300188524055,0.496597714366863,0,7.2557760437108,9.29739069207809,0,0.342233301085281,1.0776328482334,2.07994395638761,3.32660356546013,0,0,0,0,2.34640942403454,0.977931553462932,0.813792356631477,1.33151354837103,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46368447355514,1.72288698817931,1.51052125730374,0.310983165046111,0.756962552626885,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.9430538304014,2.94848165003288,2.95394953340702,0,1.47586126251736,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0.451199612907412,0.385076685522074,0,0,0.316654886678627,0,0,0,0,0.270946437543853,0,0.254876273045038,0.831076008928724,0,0,0,0.256450125116389,0,0.650756789328606,3.60643540767028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,3.57746442951761,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43282702530686,0.146508179271894,0,0,0,0,0.890894042497916,0,0,0.140669416410513,0,0,0.422250816255987,0.796991953004279,3.03912307084262,0,0,0.123084805461069,0,0.269605053441981,0.179021174675609,0,0.690503839458535,0,0,0,0.0927680981618513,0,0,4.81029999979076,1.44999915086959,0.1137934482855,2.79679015322043,4.01859059005492,0,0,0,0,0,1.52581736317083,0,0,0,0,0.41827123283581,0.461701551022782,0,0,0.718061155278177,0.434589487688032,0,0.274792780205587,0,0,0,0,0.451191321234361,0,0.167821586975843,0,0,0.421996129056054,0.163232808159148,0.706765357169704,0,3.98104772431402,2.56526937059684,4.27721101453538,0,0,0,0.134802265961354,0,0,0,0.391329237864179,0,21.3075577538671,12.0990716048664,0,0.063186579628488,0,0,0,0,0,0,1.42304773014896,0,2.08271686002157,0,0,16.5990334829929,0,0,0,0,0.581934098930517,0.0882561266915003,0.90392296312213,0,0,0,0.977756913674015,0.0801588202515337,2.13452994739353,0,2.01726584015748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.604651252380536,0,1.16495949527454,0.236349546921671,0.0824158583811665,0.13480708770837,0,0,0,0,2.25054407851027,2.47570985875021,3.32352270423348,0,0,0.0607495566580247,0,8.5898220956126,6.55682351687476,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,2.19828350517124,3.97520666736664,0,0.26446520348538,0,0,1.81538601365081,3.30129040709298,4.14239055347196,0,0,0.730755590285376,1.27668251554036,0,0,0,0,2.04170325125305,0,0,0,0.573409195690071,0.221858103073705,0.124192805882767,0,0,0,0,0,1.40500471742064,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.588886311006154,0,0,0,0,0,0,0.150420656698515,0,10.9411961572633,0.261906694481422,0,1.77427303460454,0,0,0,0,0,10.4168975702865,1.48863353516788,0,0.511049710558381,2.14280734351315,3.02655349996942,0,2.50428410486427,0,0,0,0,0.0657727735628491,0,0,0.863424021355654,0,0,0.913158720509496,0,0,0.929195074296532,0,0,0,0,0,0,0,11.6161386881475,0,0,26.6733841620285,0.22910686854405,0,0,0,1.27595303699816,0,1.29485767437579,0.410651227424988,0,0.971421986118279,1.16969731731053,0,0,0.45178432815584,0,5.1327366812669,4.47610117026079,4.15263164957519,3.29222107453066,0.245148321753905,6.3632667717439,0,0,0,0,0,0,0,0.178553938605658,0,1.60482733378337,8.03370027071169,3.66983426723633,0,0,0.135982980381829,0,8.99345628876181,0,0,0,0.126166424835079,0.109265571963696,0,0.305966489225945,1.60330443159336,2.02168778976659,0,0.682008283964155,0.267964130156178,0,0,1.27940389140589,6.42773964952099,0.581300188524055,0.496597714366863,0,7.2557760437108,9.29739069207809,0,0.342233301085281,1.0776328482334,2.07994395638761,3.32660356546013,0,0,0,0,2.34640942403454,0.977931553462932,0.813792356631477,1.33151354837103,0.402547587182052,0 | ||
|short_description=p7@DIXDC1 | |short_description=p7@DIXDC1 | ||
}} | }} |
Latest revision as of 04:35, 25 September 2015
Short description: | p7@DIXDC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_DIXDC1_5end |
Coexpression cluster: | C1607_seminal_ductus_Hepatocyte_epididymis_pancreas_kidney_stomach |
Association with transcript: | 12bp_to_ENST00000524609, uc001pmn.2_5end |
EntrezGene: | DIXDC1 |
HGNC: | 23695 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 2.27e-15 | 118 |
digestive system | 3.92e-14 | 145 |
digestive tract | 3.92e-14 | 145 |
primitive gut | 3.92e-14 | 145 |
gastrointestinal system | 7.29e-13 | 25 |
endoderm-derived structure | 5.48e-12 | 160 |
endoderm | 5.48e-12 | 160 |
presumptive endoderm | 5.48e-12 | 160 |
adult organism | 1.11e-11 | 114 |
intestine | 3.60e-11 | 17 |
foregut | 8.66e-11 | 87 |
male genital duct | 2.69e-10 | 3 |
internal male genitalia | 2.69e-10 | 3 |
small intestine | 1.47e-09 | 4 |
organ system subdivision | 2.94e-09 | 223 |
male reproductive organ | 7.57e-09 | 11 |
gland | 1.49e-08 | 59 |
duct of male reproductive system | 8.61e-08 | 4 |
endocrine gland | 2.01e-07 | 35 |
exocrine gland | 2.82e-07 | 31 |
exocrine system | 2.82e-07 | 31 |
major salivary gland | 4.97e-07 | 2 |
trunk region element | 4.98e-07 | 101 |
sac | 5.68e-07 | 26 |
gland of diencephalon | 9.05e-07 | 4 |
neuroendocrine gland | 9.05e-07 | 4 |