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(Created page with "{{f5samples |id=FF:11356-117H6 |name=Preadipocyte - subcutaneous, donor2 |sample_id=11356 |rna_tube_id=117H6 |rna_box=117 |rna_position=H6 |sample_cell_lot=N/A |sample...")
 
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{{f5samples
{{f5samples
|id=FF:11356-117H6
|DRA_sample_Accession=CAGE@SAMD00004847
|name=Preadipocyte - subcutaneous, donor2
|DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00004847
|sample_id=11356
|accession_numbers=CAGE;DRX008414;DRR009286;DRZ000711;DRZ002096;DRZ012061;DRZ013446
|rna_tube_id=117H6
|accession_numbers_RNASeq=sRNA-Seq;DRX037145;DRR041511;DRZ007153
|rna_box=117
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0002199,UBERON:0002384,UBERON:0000479,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003102,UBERON:0010317,UBERON:0002072,UBERON:0002416
|rna_position=H6
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0002320,CL:0002371,CL:0000255,CL:0000057,CL:0002334,CL:0002583
|sample_cell_lot=N/A
|sample_cell_catalog=N/A
|sample_company=Cell Applications
|rna_lot_number=1377.00000
|rna_catalog_number=CA802s-R10a
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=53 years old adult
|sample_tissue=adipose tissue
|sample_donor(cell lot)=
|sample_sex=female
|sample_age=53
|sample_ethnicity=C
|rna_rin=
|rna_od260/230=
|rna_od260/280=
|sample_cell_type=preadipocyte
|sample_cell_line=
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_weight_ug=10.00000
|rna_concentration=0.67000
|sample_note=
|profile_hcage=CNhs11981,LSID836,release011,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=SRhi10009,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000048,CL:0000055,CL:0000057,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000548,CL:0000723,CL:0002320,CL:0002334,CL:0002371,CL:0002583
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000479,UBERON:0000480,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0001062,UBERON:0002050,UBERON:0002072,UBERON:0002199,UBERON:0002384,UBERON:0002416,UBERON:0002532,UBERON:0003102,UBERON:0004120,UBERON:0005423
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000137,FF:0000142
 
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr1:170632285..170632309,+!p1@PRRX1!1.74!60.30!PRRX1;;chr1:170633348..170633399,+!p2@PRRX1!1.58!49.35!PRRX1;;chr17:1959369..1959388,+!p2@HIC1!1.51!80.96!HIC1;;chr15:57511609..57511651,+!p2@TCF12!1.46!46.42!TCF12;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.40!24.06!HOXC5;;chr8:25902876..25902936,-!p1@EBF2!1.40!23.90!EBF2;;chr12:66218255..66218304,+!p3@HMGA2!1.39!61.84!HMGA2;;chr1:170633262..170633285,+!p3@PRRX1!1.38!26.37!PRRX1;;chr11:65686802..65686818,+!p6@DRAP1!1.36!38.09!DRAP1;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.34!20.66!ZBED1;;chr12:66218598..66218645,+!p2@HMGA2!1.26!78.34!HMGA2;;chr5:2751762..2751784,-!p1@IRX2!1.24!16.35!IRX2;;chr12:54393880..54393962,+!p1@HOXC9!1.21!15.27!HOXC9;;chr16:86544113..86544145,+!p1@FOXF1!1.20!18.20!FOXF1;;chr2:239756671..239756732,+!p1@TWIST2!1.18!45.65!TWIST2;;chr12:66218212..66218244,+!p5@HMGA2!1.17!20.05!HMGA2;;chr2:19558373..19558392,-!p1@OSR1!1.15!35.93!OSR1;;chr12:66218183..66218209,+!p4@HMGA2!1.15!25.44!HMGA2;;chr6:34204921..34204939,+!p3@HMGA1!1.14!377.04!HMGA1;;chr12:54380036..54380091,+!p4@HOXC10!1.13!12.65!HOXC10;;chr11:65686732..65686756,+!p2@DRAP1!1.12!51.51!DRAP1;;chr17:46675558..46675577,-!p2@HOXB6!1.11!12.03!HOXB6;;chr12:54402745..54402788,+!p1@HOXC8!1.11!11.87!HOXC8;;chr1:170632723..170632739,+!p8@PRRX1!1.10!11.72!PRRX1;;chr17:1958388..1958404,+!p1@HIC1!1.09!72.79!HIC1;;chr1:170632477..170632506,+!p6@PRRX1!1.08!10.95!PRRX1;;chr9:132427883..132427951,+!p2@PRRX2!1.07!10.64!PRRX2;;chr2:239756739..239756755,+!p2@TWIST2!1.06!18.04!TWIST2;;chr12:66218836..66218888,+!p1@HMGA2!1.05!96.38!HMGA2;;chr7:19157248..19157268,-!p1@TWIST1!1.05!28.53!TWIST1;;chr4:174450089..174450153,-!p2@HAND2!1.05!10.18!HAND2;;chr11:65687222..65687240,+!p7@DRAP1!1.03!12.65!DRAP1;;chr11:120107344..120107351,+!p1@POU2F3!1.03!11.87!POU2F3;;chr17:46675420..46675465,-!p3@HOXB6!1.03!11.10!HOXB6;;chr11:65687362..65687436,+!p3@DRAP1!1.02!43.49!DRAP1;;chr1:170633058..170633084,+!p5@PRRX1!1.02!9.56!PRRX1;;chr17:59477233..59477263,+!p1@TBX2!1.01!29.15!TBX2;;chr9:132427972..132428056,+!p1@PRRX2!1.01!12.18!PRRX2;;chr1:170632959..170632987,+!p4@PRRX1!1.01!10.18!PRRX1;;chr1:170632250..170632277,+!p7@PRRX1!1.00!9.10!PRRX1;;chr11:46299199..46299233,+!p1@CREB3L1!0.98!45.80!CREB3L1;;chr17:46622070..46622109,-!p1@HOXB2!0.98!19.43!HOXB2;;chr10:131762504..131762555,-!p1@EBF3!0.98!8.64!EBF3;;chr10:119303078..119303169,+!p2@EMX2!0.97!8.33!EMX2;;chr2:102091566..102091581,-!p1@RFX8!0.96!8.17!RFX8;;chr4:174451370..174451387,-!p1@HAND2!0.95!7.86!HAND2;;chr15:96873984..96873999,+!p3@NR2F2!0.91!54.59!NR2F2;;chr15:96875041..96875052,+!p17@NR2F2!0.90!10.18!NR2F2;;chr1:170632762..170632786,+!p13@PRRX1!0.90!6.94!PRRX1;;chr11:46299539..46299620,+!p2@CREB3L1!0.89!11.72!CREB3L1;;chr1:170632439..170632465,+!p11@PRRX1!0.87!6.48!PRRX1;;chr7:27205106..27205134,-!p2@HOXA9!0.87!6.48!HOXA9;;chr12:115121962..115121987,-!p1@TBX3!0.86!56.29!TBX3;;chr5:72744594..72744609,-!p1@FOXD1!0.86!29.92!FOXD1;;chr16:86600426..86600441,+!p1@FOXC2!0.86!16.19!FOXC2;;chr15:67430351..67430366,+!p10@SMAD3!0.86!6.17!SMAD3;;chr2:102091144..102091183,-!p2@RFX8!0.86!6.17!RFX8;;chr4:111544219..111544240,-!p1@PITX2!0.86!6.17!PITX2;;chr11:65667884..65667895,-!p2@FOSL1!0.85!24.98!FOSL1;;chr4:4861385..4861398,+!p1@MSX1!0.85!18.81!MSX1;;chr17:46688334..46688385,-!p1@HOXB7!0.85!9.10!HOXB7;;chr19:46801639..46801699,+!p1@HIF3A!0.85!6.01!HIF3A;;chr1:170632115..170632136,+!p9@PRRX1!0.85!6.01!PRRX1;;chr15:96874012..96874042,+!p2@NR2F2!0.84!57.52!NR2F2;;chr8:22550982..22550999,-!p1@EGR3!0.84!17.73!EGR3;;chr12:54422217..54422239,+!p3@HOXC6!0.84!5.86!HOXC6;;chr17:46690839..46690884,-!p1@HOXB8!0.84!5.86!HOXB8;;chr17:46622114..46622138,-!p4@HOXB2!0.83!9.10!HOXB2;;chr15:83953397..83953425,-!p1@BNC1!0.83!6.63!BNC1;;chr12:54394309..54394336,+!p2@HOXC9!0.83!5.71!HOXC9;;chr1:170632137..170632172,+!p10@PRRX1!0.83!5.71!PRRX1;;chr5:133450365..133450444,+!p1@TCF7!0.82!27.30!TCF7;;chr19:42636586..42636607,-!p1@POU2F2!0.82!16.35!POU2F2;;chr7:27205136..27205164,-!p1@HOXA9!0.82!5.55!HOXA9;;chr2:119604456..119604501,-!p2@EN1!0.82!5.55!EN1;;chr15:96869255..96869291,+!p6@NR2F2!0.81!10.33!NR2F2;;chr7:27192185..27192209,-!p1@HOXA3!0.81!5.40!HOXA3;;chr19:31840130..31840160,-!p2@TSHZ3!0.80!8.64!TSHZ3;;chr1:170632683..170632696,+!p12@PRRX1!0.80!5.24!PRRX1;;chr12:66358080..66358094,+!p15@HMGA2!0.80!5.24!HMGA2;;chr20:42543441..42543497,+!p1@TOX2!0.79!25.29!TOX2;;chr7:19157043..19157088,-!p2@TWIST1!0.79!13.72!TWIST1;;chr7:44143925..44143970,+!p1@AEBP1!0.78!122.44!AEBP1;;chr2:121493425..121493474,+!p1@GLI2!0.78!11.72!GLI2;;chr11:65687243..65687276,+!p8@DRAP1!0.78!7.09!DRAP1;;chr17:46622205..46622218,-!p3@HOXB2!0.78!5.86!HOXB2;;chr7:27224842..27224872,-!p1@HOXA11!0.78!5.09!HOXA11;;chr15:96874145..96874166,+!p7@NR2F2!0.77!9.87!NR2F2;;chr17:46687959..46688007,-!p2@HOXB7!0.77!6.94!HOXB7;;chr17:46682321..46682362,-!p1@HOXB6!0.77!4.93!HOXB6;;chr12:115122318..115122331,-!p2@TBX3!0.77!4.93!TBX3;;chr12:66357214..66357233,+!p13@HMGA2!0.77!4.93!HMGA2;;chr5:2751785..2751808,-!p2@IRX2!0.77!4.93!IRX2;;chr8:49833978..49833996,-!p1@SNAI2!0.76!108.41!SNAI2;;chr8:49833948..49833973,-!p2@SNAI2!0.76!32.85!SNAI2;;chr6:1312325..1312340,+!p1@FOXQ1!0.76!8.17!FOXQ1;;chr1:170633194..170633205,+!p18@PRRX1!0.76!4.78!PRRX1;;chr1:170633245..170633256,+!p14@PRRX1!0.76!4.78!PRRX1;;chr12:54380404..54380433,+!p3@HOXC10!0.76!4.78!HOXC10;;chr2:176994408..176994492,+!p1@HOXD8!0.76!4.78!HOXD8;;chr11:65687158..65687216,+!p4@DRAP1!0.75!29.15!DRAP1;;chr20:42543506..42543549,+!p2@TOX2!0.75!11.87!TOX2;;chr12:54402790..54402805,+!p2@HOXC8!0.75!4.63!HOXC8;;chr4:26322267..26322334,+!p3@RBPJ!0.74!11.87!RBPJ;;chr3:141121847..141121868,+!p5@ZBTB38!0.74!7.25!ZBTB38;;chr4:111558135..111558198,-!p2@PITX2!0.74!4.47!PITX2;;chr5:139492456..139492489,+!p7@PURA!0.74!4.47!PURA;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.74!4.47!HOXC5;;chr12:66218904..66218913,+!p11@HMGA2!0.74!4.47!HMGA2;;chr12:85673977..85674015,+!p1@ALX1!0.74!4.47!ALX1;;chr1:170632310..170632321,+!p15@PRRX1!0.73!4.32!PRRX1;;chr1:158979792..158979814,+!p2@IFI16!0.71!44.41!IFI16;;chr15:96873861..96873872,+!p9@NR2F2!0.71!9.25!NR2F2;;chr1:170632647..170632659,+!p17@PRRX1!0.71!4.16!PRRX1;;chr17:46621146..46621180,-!p10@HOXB2!0.70!4.01!HOXB2;;chr6:31126291..31126399,+!p1@TCF19!0.69!42.41!TCF19;;chr19:31840313..31840380,-!p1@TSHZ3!0.69!10.95!TSHZ3;;chr12:66218573..66218596,+!p7@HMGA2!0.69!6.17!HMGA2;;chr17:46691732..46691766,-!p4@HOXB8!0.69!3.86!HOXB8;;chr5:3595977..3595999,+!p1@IRX1!0.69!3.86!IRX1;;chr1:221052776..221052799,+!p1@HLX!0.68!7.40!HLX;;chr18:53068911..53068935,-!p4@TCF4!0.68!4.32!TCF4;;chr6:34204672..34204692,+!p1@HMGA1!0.67!482.68!HMGA1;;chr17:59477275..59477286,+!p3@TBX2!0.67!5.09!TBX2;;chr12:54402729..54402743,+!p3@HOXC8!0.67!3.70!HOXC8;;chr8:72756063..72756125,-!p1@MSC!0.66!7.86!MSC;;chr19:13134772..13134822,+!p2@NFIX!0.66!5.55!NFIX;;chr17:46621101..46621143,-!p7@HOXB2!0.66!5.09!HOXB2;;chr12:66218152..66218174,+!p10@HMGA2!0.66!3.86!HMGA2;;chr14:61116183..61116208,-!p1@SIX1!0.65!15.11!SIX1;;chr15:96874927..96874938,+!p8@NR2F2!0.65!8.17!NR2F2;;chr7:44143978..44143989,+!p2@AEBP1!0.65!6.94!AEBP1;;chr17:59477197..59477212,+!p2@TBX2!0.65!6.48!TBX2;;chr18:52989031..52989079,-!p2@TCF4!0.64!8.79!TCF4;;chr5:72744445..72744466,-!p2@FOXD1!0.64!6.01!FOXD1;;chr19:45260775..45260838,+!p5@BCL3!0.64!4.63!BCL3;;chr15:96874244..96874259,+!p5@NR2F2!0.63!8.94!NR2F2;;chr7:137564372..137564394,-!p7@CREB3L2!0.63!5.86!CREB3L2;;chr8:72756667..72756736,-!p2@MSC!0.63!5.55!MSC;;chr17:46655704..46655718,-!p2@HOXB4!0.63!5.24!HOXB4;;chr15:96881221..96881240,+!p19@NR2F2!0.63!4.47!NR2F2;;chr17:46675469..46675481,-!p4@HOXB6!0.63!3.24!HOXB6;;chr1:170632051..170632081,+!p16@PRRX1!0.63!3.24!PRRX1;;chr8:72756267..72756296,-!p4@MSC!0.62!4.93!MSC;;chr1:59249732..59249749,-!p2@JUN!0.61!44.41!JUN;;chr2:121493492..121493537,+!p2@GLI2!0.61!5.55!GLI2;;chr12:66218378..66218401,+!p6@HMGA2!0.61!5.09!HMGA2;;chr2:200322654..200322707,-!p2@SATB2!0.61!4.78!SATB2;;chr12:115121802..115121814,-!p5@TBX3!0.61!3.08!TBX3;;chr12:66218420..66218439,+!p12@HMGA2!0.61!3.08!HMGA2;;chr12:66218923..66218934,+!p14@HMGA2!0.61!3.08!HMGA2;;chr11:65667846..65667868,-!p1@FOSL1!0.60!94.99!FOSL1;;chr1:158979872..158979898,+!p3@IFI16!0.60!10.79!IFI16;;chr12:27485762..27485776,+!p3@ARNTL2!0.60!9.25!ARNTL2;;chr1:212873267..212873332,-!p1@BATF3!0.60!4.32!BATF3;;chr6:1389789..1389821,+!p1@FOXF2!0.60!4.32!FOXF2;;chr15:96869114..96869160,+!p11@NR2F2!0.60!4.32!NR2F2;;chr11:65686776..65686787,+!p9@DRAP1!0.60!3.70!DRAP1;;chr7:14028488..14028516,-!p2@ETV1!0.60!3.39!ETV1;;chr7:14029283..14029311,-!p1@ETV1!0.59!18.51!ETV1;;chr3:141087393..141087426,+!p3@ZBTB38!0.59!13.72!ZBTB38;;chr15:96869165..96869183,+!p20@NR2F2!0.59!2.93!NR2F2;;chr16:86612320..86612394,+!p1@FOXL1!0.59!2.93!FOXL1;;chr17:46692457..46692484,-!p2@HOXB8!0.59!2.93!HOXB8;;chr12:54378923..54378966,+!p1@HOXC10!0.59!2.93!HOXC10;;chr12:54394059..54394088,+!p3@HOXC9!0.59!2.93!HOXC9;;chr1:170633225..170633230,+!p25@PRRX1!0.59!2.93!PRRX1;;chr15:96876966..96877017,+!p12@NR2F2!0.58!4.32!NR2F2;;chr16:54320101..54320125,-!p4@IRX3!0.58!4.32!IRX3;;chr16:54320158..54320200,-!p5@IRX3!0.58!4.32!IRX3;;chr17:46622229..46622257,-!p6@HOXB2!0.58!3.39!HOXB2;;chr2:102091478..102091490,-!p3@RFX8!0.58!2.78!RFX8;;chr7:27213893..27213954,-!p1@HOXA10!0.58!2.78!HOXA10;;chr9:1050331..1050363,+!p1@DMRT2!0.58!2.78!DMRT2;;chr5:137804484..137804498,+!p2@EGR1!0.57!13.11!EGR1;;chr15:96873921..96873946,+!p1@NR2F2!0.56!93.61!NR2F2;;chr3:71007344..71007348,-!p6@FOXP1!0.56!12.65!FOXP1;;chr17:41277372..41277418,-!p1@BRCA1!0.56!11.41!BRCA1;;chr5:321810..321877,+!p1@AHRR!0.56!10.02!AHRR;;chr15:96874216..96874236,+!p13@NR2F2!0.56!4.47!NR2F2;;chr7:44143997..44144008,+!p3@AEBP1!0.56!3.55!AEBP1;;chr7:27196267..27196311,-!p1@HOXA7!0.56!2.62!HOXA7;;chr9:1051481..1051496,+!p3@DMRT2!0.56!2.62!DMRT2;;chr19:47523058..47523114,+!p1@NPAS1!0.56!2.62!NPAS1;;chr12:115121770..115121781,-!p4@TBX3!0.56!2.62!TBX3;;chr12:115122303..115122314,-!p6@TBX3!0.56!2.62!TBX3;;chr12:124873357..124873401,-!p1@NCO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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000057;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002334;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002583;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002416
|ffid_belonging_in_development=CL:0000134
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 67: Line 43:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Preadipocyte%2520-%2520subcutaneous%252c%2520donor2.CNhs11981.11356-117H6.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Preadipocyte%2520-%2520subcutaneous%252c%2520donor2.CNhs11981.11356-117H6.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Preadipocyte%2520-%2520subcutaneous%252c%2520donor2.CNhs11981.11356-117H6.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Preadipocyte%2520-%2520subcutaneous%252c%2520donor2.CNhs11981.11356-117H6.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Preadipocyte%2520-%2520subcutaneous%252c%2520donor2.CNhs11981.11356-117H6.hg38.nobarcode.ctss.bed.gz
|id=FF:11356-117H6
|is_a=EFO:0002091;;FF:0000142
|is_obsolete=
|library_id=CNhs11981
|library_id_phase_based=2:CNhs11981
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11356
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10009.CGTACG.11356
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11356
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10009.CGTACG.11356
|name=Preadipocyte - subcutaneous, donor2
|namespace=FANTOM5
|part_of=
|profile_cagescan=,,,
|profile_hcage=CNhs11981,LSID836,release011,COMPLETED
|profile_rnaseq=
|profile_srnaseq=SRhi10009,,,
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|rna_box=117
|rna_catalog_number=CA802s-R10a
|rna_concentration=0.67
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_lot_number=1377
|rna_od260/230=
|rna_od260/280=
|rna_position=H6
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=117H6
|rna_weight_ug=10
|rnaseq_library_id=SRhi10009.CGTACG
|sample_age=53
|sample_category=primary cells
|sample_cell_catalog=N/A
|sample_cell_line=
|sample_cell_lot=N/A
|sample_cell_type=preadipocyte
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=Cell Applications
|sample_description=
|sample_dev_stage=53 years old adult
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=C
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.0667829295057e-247!GO:0043226;organelle;7.41188574988564e-200!GO:0043229;intracellular organelle;1.35192143444031e-199!GO:0043231;intracellular membrane-bound organelle;2.1584912994086e-198!GO:0043227;membrane-bound organelle;5.25639083722685e-198!GO:0005737;cytoplasm;8.07864789415467e-183!GO:0044422;organelle part;5.82689189253047e-154!GO:0044446;intracellular organelle part;1.42372519175932e-152!GO:0044444;cytoplasmic part;6.63124163368099e-128!GO:0032991;macromolecular complex;1.03226170220362e-112!GO:0030529;ribonucleoprotein complex;4.39409078168914e-96!GO:0044237;cellular metabolic process;2.01880996560043e-89!GO:0044238;primary metabolic process;2.6834497789543e-89!GO:0043170;macromolecule metabolic process;7.01385343535892e-86!GO:0005634;nucleus;4.72295128449485e-85!GO:0044428;nuclear part;1.4640742874707e-81!GO:0043233;organelle lumen;3.1013477834997e-81!GO:0031974;membrane-enclosed lumen;3.1013477834997e-81!GO:0005515;protein binding;5.99311204195468e-81!GO:0003723;RNA binding;2.37125267907085e-73!GO:0005739;mitochondrion;8.59372229369181e-70!GO:0005840;ribosome;5.88873306280541e-57!GO:0043234;protein complex;1.64134752084451e-56!GO:0006396;RNA processing;1.14997955810976e-54!GO:0006412;translation;1.46827338808271e-53!GO:0016043;cellular component organization and biogenesis;1.20235723249227e-52!GO:0003735;structural constituent of ribosome;1.40029834107685e-49!GO:0019538;protein metabolic process;1.63149009260776e-49!GO:0031981;nuclear lumen;7.94314495702219e-49!GO:0043283;biopolymer metabolic process;2.72689940592889e-48!GO:0031090;organelle membrane;1.03820602701025e-46!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.52365749910446e-46!GO:0044429;mitochondrial part;6.75071325764661e-46!GO:0010467;gene expression;1.50890294402018e-44!GO:0044260;cellular macromolecule metabolic process;6.42715003995568e-44!GO:0044267;cellular protein metabolic process;1.63318159526043e-43!GO:0015031;protein transport;4.51897916490309e-42!GO:0033279;ribosomal subunit;7.24032496308455e-42!GO:0031967;organelle envelope;1.77401679691947e-41!GO:0031975;envelope;4.54321425936947e-41!GO:0033036;macromolecule localization;5.9058660046672e-41!GO:0009058;biosynthetic process;7.15474927964736e-41!GO:0009059;macromolecule biosynthetic process;8.56315558165059e-41!GO:0044249;cellular biosynthetic process;2.74656425926418e-40!GO:0043228;non-membrane-bound organelle;3.58351464015981e-40!GO:0043232;intracellular non-membrane-bound organelle;3.58351464015981e-40!GO:0005829;cytosol;1.49080249747373e-39!GO:0016071;mRNA metabolic process;3.49106483487335e-39!GO:0045184;establishment of protein localization;2.32987571443741e-38!GO:0008104;protein localization;1.53137461471854e-37!GO:0008380;RNA splicing;3.01308974737825e-37!GO:0006996;organelle organization and biogenesis;3.29750903649233e-37!GO:0046907;intracellular transport;4.56255387178012e-36!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.15226805841053e-35!GO:0006397;mRNA processing;1.17553334060307e-34!GO:0006259;DNA metabolic process;1.71382806693646e-33!GO:0065003;macromolecular complex assembly;1.83756528384218e-33!GO:0022607;cellular component assembly;2.01152570440093e-30!GO:0006886;intracellular protein transport;8.03774063068391e-30!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.33042330700967e-29!GO:0005740;mitochondrial envelope;3.49845740280452e-29!GO:0005654;nucleoplasm;1.97105296268905e-28!GO:0007049;cell cycle;1.0438990560638e-27!GO:0005681;spliceosome;2.80567413733362e-27!GO:0031966;mitochondrial membrane;2.99396876820113e-27!GO:0019866;organelle inner membrane;8.93786753017903e-27!GO:0003676;nucleic acid binding;5.2284331461561e-26!GO:0005743;mitochondrial inner membrane;5.06653241546551e-25!GO:0044451;nucleoplasm part;3.76851790325851e-23!GO:0044445;cytosolic part;1.22331051941727e-22!GO:0051649;establishment of cellular localization;1.71979419270828e-22!GO:0051641;cellular localization;1.98529953913998e-22!GO:0015934;large ribosomal subunit;1.99805103393054e-22!GO:0016462;pyrophosphatase activity;2.32100660360754e-22!GO:0000278;mitotic cell cycle;2.60105810421424e-22!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;3.0118932844632e-22!GO:0005730;nucleolus;3.76022014498227e-22!GO:0006119;oxidative phosphorylation;3.93523191440367e-22!GO:0016817;hydrolase activity, acting on acid anhydrides;5.04743001469335e-22!GO:0000166;nucleotide binding;5.56411110279523e-22!GO:0017111;nucleoside-triphosphatase activity;1.16091278011374e-21!GO:0022402;cell cycle process;1.70710381062788e-21!GO:0006457;protein folding;4.34110138522859e-21!GO:0044455;mitochondrial membrane part;7.34201403079114e-21!GO:0015935;small ribosomal subunit;1.80021311755071e-20!GO:0031980;mitochondrial lumen;8.11191947005846e-20!GO:0005759;mitochondrial matrix;8.11191947005846e-20!GO:0016070;RNA metabolic process;2.35686849729433e-19!GO:0005783;endoplasmic reticulum;4.01421250020554e-19!GO:0012505;endomembrane system;6.47230285102782e-19!GO:0005694;chromosome;1.01292261888986e-18!GO:0006974;response to DNA damage stimulus;2.12520639715438e-18!GO:0022618;protein-RNA complex assembly;2.76509288639207e-18!GO:0042254;ribosome biogenesis and assembly;4.77943168695606e-18!GO:0000502;proteasome complex (sensu Eukaryota);1.31932837404607e-17!GO:0000087;M phase of mitotic cell cycle;1.59594361148015e-17!GO:0007067;mitosis;2.8340791745114e-17!GO:0044427;chromosomal part;7.08903645295982e-17!GO:0005746;mitochondrial respiratory chain;8.89408781967884e-17!GO:0005761;mitochondrial ribosome;1.02286732302979e-16!GO:0000313;organellar ribosome;1.02286732302979e-16!GO:0022403;cell cycle phase;1.40011570098373e-16!GO:0043285;biopolymer catabolic process;1.46910752802201e-16!GO:0048770;pigment granule;1.57598653760436e-16!GO:0042470;melanosome;1.57598653760436e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.45887578599142e-16!GO:0008134;transcription factor binding;2.83814710582633e-16!GO:0044432;endoplasmic reticulum part;6.57684531621884e-16!GO:0008135;translation factor activity, nucleic acid binding;6.60215430047128e-16!GO:0051603;proteolysis involved in cellular protein catabolic process;1.14701138217463e-15!GO:0006260;DNA replication;1.14701138217463e-15!GO:0044265;cellular macromolecule catabolic process;1.4081011525524e-15!GO:0016874;ligase activity;1.54089572571272e-15!GO:0006512;ubiquitin cycle;1.55893365695288e-15!GO:0006605;protein targeting;1.56934639181007e-15!GO:0019941;modification-dependent protein catabolic process;1.92557433661915e-15!GO:0043632;modification-dependent macromolecule catabolic process;1.92557433661915e-15!GO:0006281;DNA repair;2.53716833931579e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);3.15792334710631e-15!GO:0044257;cellular protein catabolic process;3.36294033313603e-15!GO:0050136;NADH dehydrogenase (quinone) activity;3.36294033313603e-15!GO:0003954;NADH dehydrogenase activity;3.36294033313603e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;3.36294033313603e-15!GO:0051186;cofactor metabolic process;3.38764524601555e-15!GO:0051082;unfolded protein binding;3.76735810332351e-15!GO:0032553;ribonucleotide binding;3.97417936414903e-15!GO:0032555;purine ribonucleotide binding;3.97417936414903e-15!GO:0006511;ubiquitin-dependent protein catabolic process;4.23238481651433e-15!GO:0009057;macromolecule catabolic process;4.81126393672746e-15!GO:0051301;cell division;8.32070735650254e-15!GO:0017076;purine nucleotide binding;9.96065057183276e-15!GO:0030163;protein catabolic process;9.96065057183276e-15!GO:0048193;Golgi vesicle transport;1.52918658889917e-14!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.75598102892773e-14!GO:0005794;Golgi apparatus;3.3329877853297e-14!GO:0000398;nuclear mRNA splicing, via spliceosome;3.3451935427724e-14!GO:0000375;RNA splicing, via transesterification reactions;3.3451935427724e-14!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;3.3451935427724e-14!GO:0000279;M phase;3.65579777802739e-14!GO:0051276;chromosome organization and biogenesis;6.54777728361389e-14!GO:0042775;organelle ATP synthesis coupled electron transport;1.65667647179023e-13!GO:0042773;ATP synthesis coupled electron transport;1.65667647179023e-13!GO:0009719;response to endogenous stimulus;2.47474800995166e-13!GO:0030964;NADH dehydrogenase complex (quinone);2.70340385442877e-13!GO:0045271;respiratory chain complex I;2.70340385442877e-13!GO:0005747;mitochondrial respiratory chain complex I;2.70340385442877e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;5.92387829312658e-13!GO:0044248;cellular catabolic process;6.90955961737933e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;7.13038643982251e-13!GO:0005524;ATP binding;7.26509799587625e-13!GO:0005635;nuclear envelope;8.80882069079631e-13!GO:0032559;adenyl ribonucleotide binding;1.99441346636168e-12!GO:0003743;translation initiation factor activity;2.01807295097055e-12!GO:0006364;rRNA processing;2.45737968051142e-12!GO:0044453;nuclear membrane part;2.52802315148668e-12!GO:0005793;ER-Golgi intermediate compartment;3.37078202881008e-12!GO:0031965;nuclear membrane;4.19591788081147e-12!GO:0016072;rRNA metabolic process;6.34788786641401e-12!GO:0030554;adenyl nucleotide binding;6.9049734885806e-12!GO:0006413;translational initiation;1.18320781008776e-11!GO:0009259;ribonucleotide metabolic process;1.46694495533018e-11!GO:0016604;nuclear body;1.58417184151183e-11!GO:0006732;coenzyme metabolic process;1.66432403891576e-11!GO:0006399;tRNA metabolic process;2.00814728969715e-11!GO:0000074;regulation of progression through cell cycle;2.36003541233595e-11!GO:0051726;regulation of cell cycle;2.65535153680465e-11!GO:0006325;establishment and/or maintenance of chromatin architecture;4.26065041212998e-11!GO:0042175;nuclear envelope-endoplasmic reticulum network;5.70968601347093e-11!GO:0006913;nucleocytoplasmic transport;5.7219406854461e-11!GO:0016887;ATPase activity;6.24712443519224e-11!GO:0006163;purine nucleotide metabolic process;6.34539184124859e-11!GO:0012501;programmed cell death;8.69463914286835e-11!GO:0043412;biopolymer modification;9.17784376460558e-11!GO:0065004;protein-DNA complex assembly;1.03901253030396e-10!GO:0006446;regulation of translational initiation;1.17576957513731e-10!GO:0003712;transcription cofactor activity;1.2025931725863e-10!GO:0016192;vesicle-mediated transport;1.26847698723856e-10!GO:0042623;ATPase activity, coupled;1.29743275853593e-10!GO:0009055;electron carrier activity;1.34883337494325e-10!GO:0051169;nuclear transport;1.39213479568654e-10!GO:0006323;DNA packaging;1.41004491601094e-10!GO:0006915;apoptosis;1.41004491601094e-10!GO:0005643;nuclear pore;2.0568921331357e-10!GO:0005789;endoplasmic reticulum membrane;2.07510117170296e-10!GO:0009150;purine ribonucleotide metabolic process;2.24590800964957e-10!GO:0009260;ribonucleotide biosynthetic process;2.8531778167797e-10!GO:0006164;purine nucleotide biosynthetic process;3.90318882309444e-10!GO:0048523;negative regulation of cellular process;8.88524133072422e-10!GO:0008219;cell death;9.96120873464113e-10!GO:0016265;death;9.96120873464113e-10!GO:0065002;intracellular protein transport across a membrane;1.13053660778655e-09!GO:0009152;purine ribonucleotide biosynthetic process;1.42190335679757e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.88298432291093e-09!GO:0000785;chromatin;1.90669411364777e-09!GO:0004386;helicase activity;2.05276778847926e-09!GO:0006464;protein modification process;2.19421676297111e-09!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;2.20667060990181e-09!GO:0006366;transcription from RNA polymerase II promoter;2.39972762586179e-09!GO:0006333;chromatin assembly or disassembly;2.59402520311234e-09!GO:0008639;small protein conjugating enzyme activity;2.70707151295743e-09!GO:0016607;nuclear speck;3.57683205270973e-09!GO:0009141;nucleoside triphosphate metabolic process;4.04336419726803e-09!GO:0009199;ribonucleoside triphosphate metabolic process;4.19276313663151e-09!GO:0046930;pore complex;6.51588958578977e-09!GO:0006888;ER to Golgi vesicle-mediated transport;6.88132520732161e-09!GO:0004842;ubiquitin-protein ligase activity;6.9481593873824e-09!GO:0009205;purine ribonucleoside triphosphate metabolic process;9.02252432162996e-09!GO:0009144;purine nucleoside triphosphate metabolic process;9.02252432162996e-09!GO:0006461;protein complex assembly;9.42186660195026e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.21213598003651e-08!GO:0006403;RNA localization;1.24106504261479e-08!GO:0008565;protein transporter activity;1.24106504261479e-08!GO:0019787;small conjugating protein ligase activity;1.26633736539143e-08!GO:0017038;protein import;1.26633736539143e-08!GO:0006334;nucleosome assembly;1.29150280537689e-08!GO:0005788;endoplasmic reticulum lumen;1.33862651708013e-08!GO:0050657;nucleic acid transport;1.42685097473034e-08!GO:0051236;establishment of RNA localization;1.42685097473034e-08!GO:0050658;RNA transport;1.42685097473034e-08!GO:0008026;ATP-dependent helicase activity;1.52045602726959e-08!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.57240206908005e-08!GO:0004812;aminoacyl-tRNA ligase activity;1.57240206908005e-08!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.57240206908005e-08!GO:0015630;microtubule cytoskeleton;1.58575109114396e-08!GO:0003697;single-stranded DNA binding;1.58575109114396e-08!GO:0050794;regulation of cellular process;1.70914820367999e-08!GO:0030532;small nuclear ribonucleoprotein complex;1.82222357929795e-08!GO:0016779;nucleotidyltransferase activity;2.45340116875541e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.67435712565692e-08!GO:0003924;GTPase activity;2.86444737505927e-08!GO:0043038;amino acid activation;2.98507978368347e-08!GO:0006418;tRNA aminoacylation for protein translation;2.98507978368347e-08!GO:0043039;tRNA aminoacylation;2.98507978368347e-08!GO:0009142;nucleoside triphosphate biosynthetic process;3.68546873762005e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;3.68546873762005e-08!GO:0048519;negative regulation of biological process;4.06909394533927e-08!GO:0043566;structure-specific DNA binding;4.33193587843631e-08!GO:0015986;ATP synthesis coupled proton transport;4.8257248347601e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;4.8257248347601e-08!GO:0043687;post-translational protein modification;5.03047285850807e-08!GO:0009117;nucleotide metabolic process;5.07471919058007e-08!GO:0009060;aerobic respiration;5.21305716858975e-08!GO:0007005;mitochondrion organization and biogenesis;5.94056046956249e-08!GO:0030120;vesicle coat;6.45145315893766e-08!GO:0030662;coated vesicle membrane;6.45145315893766e-08!GO:0031497;chromatin assembly;7.29677606771754e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;7.81443349328377e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;7.81443349328377e-08!GO:0046034;ATP metabolic process;8.55223220599726e-08!GO:0006261;DNA-dependent DNA replication;1.0838029345706e-07!GO:0051188;cofactor biosynthetic process;1.14597300027785e-07!GO:0009056;catabolic process;1.23595651645582e-07!GO:0016881;acid-amino acid ligase activity;1.45954755862469e-07!GO:0005667;transcription factor complex;1.49313165756652e-07!GO:0045333;cellular respiration;1.70459099350051e-07!GO:0019829;cation-transporting ATPase activity;1.86120103620119e-07!GO:0051246;regulation of protein metabolic process;1.91946958438652e-07!GO:0042981;regulation of apoptosis;1.96257102729057e-07!GO:0005819;spindle;2.2700441291084e-07!GO:0043067;regulation of programmed cell death;2.32283999787507e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;2.70895208547193e-07!GO:0005839;proteasome core complex (sensu Eukaryota);2.78400894789465e-07!GO:0015078;hydrogen ion transmembrane transporter activity;3.67710462875912e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;6.50990995636686e-07!GO:0051028;mRNA transport;6.51444219004448e-07!GO:0048475;coated membrane;6.79401656953659e-07!GO:0030117;membrane coat;6.79401656953659e-07!GO:0006099;tricarboxylic acid cycle;7.16637376249668e-07!GO:0046356;acetyl-CoA catabolic process;7.16637376249668e-07!GO:0006754;ATP biosynthetic process;7.35092248419338e-07!GO:0006753;nucleoside phosphate metabolic process;7.35092248419338e-07!GO:0043069;negative regulation of programmed cell death;8.12799265190339e-07!GO:0000775;chromosome, pericentric region;8.14215150817716e-07!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;9.06710648511673e-07!GO:0016469;proton-transporting two-sector ATPase complex;9.76923523368126e-07!GO:0051187;cofactor catabolic process;1.18505781510598e-06!GO:0043066;negative regulation of apoptosis;1.19531577823298e-06!GO:0006916;anti-apoptosis;1.39615307482811e-06!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.61588838352098e-06!GO:0045259;proton-transporting ATP synthase complex;1.69369497291522e-06!GO:0031324;negative regulation of cellular metabolic process;1.72008721878968e-06!GO:0006084;acetyl-CoA metabolic process;1.75761014296654e-06!GO:0016787;hydrolase activity;1.76158409795142e-06!GO:0005762;mitochondrial large ribosomal subunit;1.82311822708027e-06!GO:0000315;organellar large ribosomal subunit;1.82311822708027e-06!GO:0016491;oxidoreductase activity;2.11235135758285e-06!GO:0005813;centrosome;2.26283733196019e-06!GO:0000245;spliceosome assembly;2.30990402466184e-06!GO:0004298;threonine endopeptidase activity;2.30990402466184e-06!GO:0009109;coenzyme catabolic process;2.45088976544876e-06!GO:0005768;endosome;2.65757707308734e-06!GO:0051329;interphase of mitotic cell cycle;2.69828482914634e-06!GO:0044431;Golgi apparatus part;3.7179296809237e-06!GO:0007249;I-kappaB kinase/NF-kappaB cascade;3.88145784625932e-06!GO:0007051;spindle organization and biogenesis;3.92574805262668e-06!GO:0032446;protein modification by small protein conjugation;4.41268169325541e-06!GO:0005815;microtubule organizing center;4.42834027256417e-06!GO:0051170;nuclear import;5.12740176440724e-06!GO:0000151;ubiquitin ligase complex;5.52948268197043e-06!GO:0009108;coenzyme biosynthetic process;6.21859404029059e-06!GO:0043623;cellular protein complex assembly;6.43177184504317e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;6.80296267724203e-06!GO:0003714;transcription corepressor activity;7.15811341629244e-06!GO:0006613;cotranslational protein targeting to membrane;7.18697344307633e-06!GO:0016567;protein ubiquitination;7.56063184838263e-06!GO:0016853;isomerase activity;7.89430958796943e-06!GO:0003899;DNA-directed RNA polymerase activity;7.97495109645875e-06!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;8.39078049094812e-06!GO:0016563;transcription activator activity;9.06019822062404e-06!GO:0006606;protein import into nucleus;1.00636760316847e-05!GO:0016740;transferase activity;1.02232398415089e-05!GO:0045454;cell redox homeostasis;1.1003477911105e-05!GO:0051325;interphase;1.17628112243722e-05!GO:0016859;cis-trans isomerase activity;1.22823777246142e-05!GO:0005657;replication fork;1.28129059705801e-05!GO:0000075;cell cycle checkpoint;1.3726011815745e-05!GO:0005525;GTP binding;1.95804718256346e-05!GO:0003724;RNA helicase activity;1.98776497372217e-05!GO:0016568;chromatin modification;1.98776497372217e-05!GO:0003713;transcription coactivator activity;2.09945482244699e-05!GO:0006752;group transfer coenzyme metabolic process;2.3008774012984e-05!GO:0031252;leading edge;2.57476430297829e-05!GO:0050789;regulation of biological process;2.57476430297829e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;3.0422825307459e-05!GO:0030867;rough endoplasmic reticulum membrane;3.13013007175046e-05!GO:0009892;negative regulation of metabolic process;3.44018433260363e-05!GO:0051427;hormone receptor binding;3.44018433260363e-05!GO:0016564;transcription repressor activity;3.46204942618468e-05!GO:0044440;endosomal part;3.80850344481745e-05!GO:0010008;endosome membrane;3.80850344481745e-05!GO:0008094;DNA-dependent ATPase activity;3.87820122322456e-05!GO:0000314;organellar small ribosomal subunit;4.18938972143566e-05!GO:0005763;mitochondrial small ribosomal subunit;4.18938972143566e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.36277363242673e-05!GO:0007010;cytoskeleton organization and biogenesis;4.88796719275925e-05!GO:0008361;regulation of cell size;4.9808536860963e-05!GO:0005798;Golgi-associated vesicle;5.14821087968741e-05!GO:0016049;cell growth;5.901453105624e-05!GO:0044452;nucleolar part;6.16005628772472e-05!GO:0043021;ribonucleoprotein binding;6.53782804579963e-05!GO:0035257;nuclear hormone receptor binding;7.73430639358042e-05!GO:0045786;negative regulation of progression through cell cycle;8.00343076554431e-05!GO:0000139;Golgi membrane;8.03788303207155e-05!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;8.26442443336038e-05!GO:0001558;regulation of cell growth;8.61952737719817e-05!GO:0048522;positive regulation of cellular process;8.98891664796655e-05!GO:0009165;nucleotide biosynthetic process;9.58050975777213e-05!GO:0006793;phosphorus metabolic process;9.68183934310135e-05!GO:0006796;phosphate metabolic process;9.68183934310135e-05!GO:0005048;signal sequence binding;0.000112237786115566!GO:0005770;late endosome;0.000133504044284539!GO:0006612;protein targeting to membrane;0.00014272037988302!GO:0006626;protein targeting to mitochondrion;0.000145686743177135!GO:0051789;response to protein stimulus;0.00015024326571888!GO:0006986;response to unfolded protein;0.00015024326571888!GO:0030036;actin cytoskeleton organization and biogenesis;0.000152088954436738!GO:0032561;guanyl ribonucleotide binding;0.00015549916357411!GO:0019001;guanyl nucleotide binding;0.00015549916357411!GO:0000786;nucleosome;0.000160498453165489!GO:0008033;tRNA processing;0.00020884494054405!GO:0016310;phosphorylation;0.000210184714629802!GO:0008654;phospholipid biosynthetic process;0.000210184714629802!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000212398045654532!GO:0043681;protein import into mitochondrion;0.000224720082576335!GO:0005769;early endosome;0.000226743157314871!GO:0051168;nuclear export;0.000240900762359244!GO:0000776;kinetochore;0.000248363365777494!GO:0016363;nuclear matrix;0.000256486832820142!GO:0006950;response to stress;0.000269159336293156!GO:0006091;generation of precursor metabolites and energy;0.000271619083722183!GO:0033116;ER-Golgi intermediate compartment membrane;0.000272999842722782!GO:0019222;regulation of metabolic process;0.000278744955115004!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000281939657930368!GO:0016481;negative regulation of transcription;0.000295362166583763!GO:0005885;Arp2/3 protein complex;0.000296935353215137!GO:0019867;outer membrane;0.000307758241773636!GO:0031968;organelle outer membrane;0.000332800269017097!GO:0031072;heat shock protein binding;0.000369701328099367!GO:0016023;cytoplasmic membrane-bound vesicle;0.000392069421273449!GO:0006839;mitochondrial transport;0.000401376098507688!GO:0004527;exonuclease activity;0.000417566865664689!GO:0004576;oligosaccharyl transferase activity;0.000437432755998794!GO:0031988;membrane-bound vesicle;0.000445633322104798!GO:0015980;energy derivation by oxidation of organic compounds;0.000453004844353629!GO:0051052;regulation of DNA metabolic process;0.000464872884400093!GO:0008250;oligosaccharyl transferase complex;0.000469245216438269!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000562096591584763!GO:0008186;RNA-dependent ATPase activity;0.000567980020373584!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000592635798985441!GO:0006383;transcription from RNA polymerase III promoter;0.000599666585754081!GO:0003690;double-stranded DNA binding;0.000615482641357431!GO:0030663;COPI coated vesicle membrane;0.000616887659043676!GO:0030126;COPI vesicle coat;0.000616887659043676!GO:0030880;RNA polymerase complex;0.000627476384297637!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.000677522646686815!GO:0019899;enzyme binding;0.000682483597274086!GO:0006302;double-strand break repair;0.000717578921758754!GO:0005905;coated pit;0.000719933812085642!GO:0051252;regulation of RNA metabolic process;0.000728136491864748!GO:0007088;regulation of mitosis;0.000739500757937861!GO:0000059;protein import into nucleus, docking;0.000744071709298347!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000744071709298347!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000747883333953744!GO:0003729;mRNA binding;0.00082647014381375!GO:0019843;rRNA binding;0.000919222397739087!GO:0016741;transferase activity, transferring one-carbon groups;0.000934160616614093!GO:0018196;peptidyl-asparagine modification;0.000944832957282217!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.000944832957282217!GO:0006414;translational elongation;0.000951527918188123!GO:0008168;methyltransferase activity;0.000953907913246109!GO:0030133;transport vesicle;0.000966082026342972!GO:0005741;mitochondrial outer membrane;0.000973530414956381!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00106144936520653!GO:0046483;heterocycle metabolic process;0.00108803055944974!GO:0051920;peroxiredoxin activity;0.00120017366410831!GO:0007059;chromosome segregation;0.00132377233445219!GO:0000082;G1/S transition of mitotic cell cycle;0.00133697789771431!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00140088253568658!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00140453543830593!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00140453543830593!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00140453543830593!GO:0048500;signal recognition particle;0.00141487563755261!GO:0030029;actin filament-based process;0.00143602724269734!GO:0006275;regulation of DNA replication;0.00144055211304899!GO:0030137;COPI-coated vesicle;0.0014651227645904!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0014936356046987!GO:0000428;DNA-directed RNA polymerase complex;0.0014936356046987!GO:0004004;ATP-dependent RNA helicase activity;0.00149677008831925!GO:0003684;damaged DNA binding;0.00153148263855311!GO:0007006;mitochondrial membrane organization and biogenesis;0.00163750715027519!GO:0046474;glycerophospholipid biosynthetic process;0.0017142447840043!GO:0031982;vesicle;0.00175196344724794!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00177688175680925!GO:0031410;cytoplasmic vesicle;0.00183016589913909!GO:0008312;7S RNA binding;0.00187779890384916!GO:0003678;DNA helicase activity;0.00190466319461067!GO:0005684;U2-dependent spliceosome;0.00190664757531973!GO:0006891;intra-Golgi vesicle-mediated transport;0.00194655924394784!GO:0008047;enzyme activator activity;0.00198292290509763!GO:0005773;vacuole;0.00201321506736616!GO:0007052;mitotic spindle organization and biogenesis;0.00208556176899426!GO:0005791;rough endoplasmic reticulum;0.0021305679497894!GO:0032508;DNA duplex unwinding;0.00225771727949061!GO:0032392;DNA geometric change;0.00225771727949061!GO:0007243;protein kinase cascade;0.00237839934596281!GO:0008180;signalosome;0.00260061890499993!GO:0043284;biopolymer biosynthetic process;0.00260119063741954!GO:0042802;identical protein binding;0.00260193680947796!GO:0007093;mitotic cell cycle checkpoint;0.0026209565300638!GO:0005874;microtubule;0.0026508895805096!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00268460437955424!GO:0035258;steroid hormone receptor binding;0.00269644161544238!GO:0006402;mRNA catabolic process;0.00274382666622314!GO:0043488;regulation of mRNA stability;0.00276067752558172!GO:0043487;regulation of RNA stability;0.00276067752558172!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.002837387164517!GO:0030658;transport vesicle membrane;0.00289017733170046!GO:0008139;nuclear localization sequence binding;0.00291148783701654!GO:0003682;chromatin binding;0.00295497676040234!GO:0030134;ER to Golgi transport vesicle;0.00295497676040234!GO:0030127;COPII vesicle coat;0.00296360069170247!GO:0012507;ER to Golgi transport vesicle membrane;0.00296360069170247!GO:0009112;nucleobase metabolic process;0.003013202826608!GO:0008632;apoptotic program;0.00306947317925089!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00307936697396955!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00307936697396955!GO:0051087;chaperone binding;0.00320110829280028!GO:0016251;general RNA polymerase II transcription factor activity;0.0032012991836619!GO:0006268;DNA unwinding during replication;0.0034537078426314!GO:0006401;RNA catabolic process;0.00354138525664584!GO:0048471;perinuclear region of cytoplasm;0.00373969388190605!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00377126194161737!GO:0045047;protein targeting to ER;0.00377126194161737!GO:0008243;plasminogen activator activity;0.00381270095826915!GO:0006595;polyamine metabolic process;0.00381696126551173!GO:0009116;nucleoside metabolic process;0.00383572315714407!GO:0030176;integral to endoplasmic reticulum membrane;0.00385912446326637!GO:0030132;clathrin coat of coated pit;0.00385912446326637!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0040313191760048!GO:0006352;transcription initiation;0.00412524399594244!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.00417214216433789!GO:0045941;positive regulation of transcription;0.00417856716701477!GO:0004518;nuclease activity;0.00425763211542375!GO:0046489;phosphoinositide biosynthetic process;0.00454221665922598!GO:0006310;DNA recombination;0.00477470922959967!GO:0017166;vinculin binding;0.00517453581603114!GO:0065007;biological regulation;0.00521833309627668!GO:0015631;tubulin binding;0.00537506514663603!GO:0000178;exosome (RNase complex);0.00560435946782924!GO:0048518;positive regulation of biological process;0.00581982485439938!GO:0007050;cell cycle arrest;0.00581982485439938!GO:0030521;androgen receptor signaling pathway;0.00584577004877467!GO:0065009;regulation of a molecular function;0.00586014189942346!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00600605152180915!GO:0000323;lytic vacuole;0.00600984059224736!GO:0005764;lysosome;0.00600984059224736!GO:0000049;tRNA binding;0.00616540643828767!GO:0005876;spindle microtubule;0.00676524440488005!GO:0003746;translation elongation factor activity;0.00732572060457798!GO:0040008;regulation of growth;0.00743087045303558!GO:0030027;lamellipodium;0.00747052783708693!GO:0000910;cytokinesis;0.00764480519454788!GO:0003711;transcription elongation regulator activity;0.00776642759910575!GO:0048144;fibroblast proliferation;0.00781100899464645!GO:0048145;regulation of fibroblast proliferation;0.00781100899464645!GO:0031124;mRNA 3'-end processing;0.00797506300557064!GO:0045893;positive regulation of transcription, DNA-dependent;0.00797506300557064!GO:0030660;Golgi-associated vesicle membrane;0.00803465999480421!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00805611843763316!GO:0015399;primary active transmembrane transporter activity;0.00805611843763316!GO:0016272;prefoldin complex;0.00829889745694688!GO:0006220;pyrimidine nucleotide metabolic process;0.00829889745694688!GO:0016126;sterol biosynthetic process;0.00829889745694688!GO:0006144;purine base metabolic process;0.00849502753841973!GO:0005096;GTPase activator activity;0.00863363810210577!GO:0042770;DNA damage response, signal transduction;0.0086825590581762!GO:0048146;positive regulation of fibroblast proliferation;0.00872495985376879!GO:0043022;ribosome binding;0.00872495985376879!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00899231319645835!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00903152032455278!GO:0015992;proton transport;0.00960724221550241!GO:0005869;dynactin complex;0.00960724221550241!GO:0005862;muscle thin filament tropomyosin;0.00961220295147075!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.00971291793837816!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.00979971494595012!GO:0000339;RNA cap binding;0.00984614616312963!GO:0006270;DNA replication initiation;0.00984614616312963!GO:0031323;regulation of cellular metabolic process;0.0099276491521119!GO:0000228;nuclear chromosome;0.0100135155615549!GO:0016044;membrane organization and biogenesis;0.0100135155615549!GO:0001726;ruffle;0.0102885939196607!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0102892154295137!GO:0032984;macromolecular complex disassembly;0.0103743069803983!GO:0005669;transcription factor TFIID complex;0.0104278072411442!GO:0048487;beta-tubulin binding;0.0104642690381287!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0105973739987048!GO:0015002;heme-copper terminal oxidase activity;0.0105973739987048!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0105973739987048!GO:0004129;cytochrome-c oxidase activity;0.0105973739987048!GO:0005832;chaperonin-containing T-complex;0.0107273356225544!GO:0006740;NADPH regeneration;0.0107628009755567!GO:0006098;pentose-phosphate shunt;0.0107628009755567!GO:0006818;hydrogen transport;0.0109265885604943!GO:0048468;cell development;0.0110994848007326!GO:0005758;mitochondrial intermembrane space;0.0111389748816184!GO:0007017;microtubule-based process;0.0112811059422286!GO:0005637;nuclear inner membrane;0.0112811059422286!GO:0006405;RNA export from nucleus;0.0113290461412096!GO:0043596;nuclear replication fork;0.0113951146915868!GO:0006611;protein export from nucleus;0.0115164379821971!GO:0051539;4 iron, 4 sulfur cluster binding;0.0115803541641087!GO:0009124;nucleoside monophosphate biosynthetic process;0.0116429325663301!GO:0009123;nucleoside monophosphate metabolic process;0.0116429325663301!GO:0051540;metal cluster binding;0.0117244610242333!GO:0051536;iron-sulfur cluster binding;0.0117244610242333!GO:0008092;cytoskeletal protein binding;0.0119597532238598!GO:0006778;porphyrin metabolic process;0.0124829938889431!GO:0033013;tetrapyrrole metabolic process;0.0124829938889431!GO:0006979;response to oxidative stress;0.012836915610719!GO:0004532;exoribonuclease activity;0.0130809119257695!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0130809119257695!GO:0006289;nucleotide-excision repair;0.0131617764912512!GO:0006509;membrane protein ectodomain proteolysis;0.0132543475036904!GO:0033619;membrane protein proteolysis;0.0132543475036904!GO:0030118;clathrin coat;0.0133280982665977!GO:0000922;spindle pole;0.0138709786607694!GO:0019206;nucleoside kinase activity;0.0149672488604983!GO:0008408;3'-5' exonuclease activity;0.0153595195567422!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.0153595195567422!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.0153595195567422!GO:0009303;rRNA transcription;0.01547374480573!GO:0016197;endosome transport;0.0157514427732093!GO:0050681;androgen receptor binding;0.0158853625246673!GO:0031570;DNA integrity checkpoint;0.0161003116484383!GO:0004003;ATP-dependent DNA helicase activity;0.0161098394189012!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.0163736930372325!GO:0043241;protein complex disassembly;0.0163933292326263!GO:0009451;RNA modification;0.0165667466771078!GO:0003702;RNA polymerase II transcription factor activity;0.0169561591304471!GO:0045045;secretory pathway;0.0172145247223485!GO:0043624;cellular protein complex disassembly;0.0173436766766579!GO:0031901;early endosome membrane;0.0176750304879055!GO:0022408;negative regulation of cell-cell adhesion;0.0177964896812722!GO:0022890;inorganic cation transmembrane transporter activity;0.0179326980394017!GO:0006417;regulation of translation;0.0179745483293096!GO:0006350;transcription;0.0180467284007382!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0181828500452299!GO:0008283;cell proliferation;0.018327589215643!GO:0000792;heterochromatin;0.018346917839926!GO:0004177;aminopeptidase activity;0.0183697970301462!GO:0031543;peptidyl-proline dioxygenase activity;0.0187618832349995!GO:0006892;post-Golgi vesicle-mediated transport;0.0187897191849517!GO:0031625;ubiquitin protein ligase binding;0.0190831478869757!GO:0006378;mRNA polyadenylation;0.019125444997751!GO:0008022;protein C-terminus binding;0.019181105082641!GO:0031529;ruffle organization and biogenesis;0.0196014327217148!GO:0031970;organelle envelope lumen;0.0197696625896498!GO:0046467;membrane lipid biosynthetic process;0.0200526391813465!GO:0031123;RNA 3'-end processing;0.0200937644936874!GO:0019798;procollagen-proline dioxygenase activity;0.0203956916603012!GO:0007346;regulation of progression through mitotic cell cycle;0.0205342597881517!GO:0045892;negative regulation of transcription, DNA-dependent;0.0207500516765484!GO:0006984;ER-nuclear signaling pathway;0.0217478866136536!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0219925986253477!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0220761787218298!GO:0033673;negative regulation of kinase activity;0.0221541518048387!GO:0006469;negative regulation of protein kinase activity;0.0221541518048387!GO:0031371;ubiquitin conjugating enzyme complex;0.02226646732338!GO:0008538;proteasome activator activity;0.022288935196494!GO:0007021;tubulin folding;0.0229283078621293!GO:0015036;disulfide oxidoreductase activity;0.0229293386135478!GO:0022411;cellular component disassembly;0.0234970607351194!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0236051649840785!GO:0000096;sulfur amino acid metabolic process;0.0236051649840785!GO:0009161;ribonucleoside monophosphate metabolic process;0.023801387136277!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.023801387136277!GO:0006284;base-excision repair;0.0239950620461345!GO:0042168;heme metabolic process;0.0240282440667374!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0244808420083494!GO:0051128;regulation of cellular component organization and biogenesis;0.0254197141161527!GO:0030032;lamellipodium biogenesis;0.0258778942009234!GO:0016584;nucleosome positioning;0.0270487382637524!GO:0051348;negative regulation of transferase activity;0.0271088929284043!GO:0022415;viral reproductive process;0.027349130134676!GO:0030508;thiol-disulfide exchange intermediate activity;0.0274250516276912!GO:0006520;amino acid metabolic process;0.0279875894959187!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0282447002044358!GO:0030041;actin filament polymerization;0.0283015676579498!GO:0044262;cellular carbohydrate metabolic process;0.0284043531105954!GO:0047485;protein N-terminus binding;0.0284266081590802!GO:0030518;steroid hormone receptor signaling pathway;0.028579958093644!GO:0030125;clathrin vesicle coat;0.028579958093644!GO:0030665;clathrin coated vesicle membrane;0.028579958093644!GO:0006506;GPI anchor biosynthetic process;0.0289472993115484!GO:0031418;L-ascorbic acid binding;0.0289472993115484!GO:0004674;protein serine/threonine kinase activity;0.029261308408976!GO:0006497;protein amino acid lipidation;0.0292907688809353!GO:0006376;mRNA splice site selection;0.0292907688809353!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0292907688809353!GO:0030433;ER-associated protein catabolic process;0.0295275279423982!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0295275279423982!GO:0003756;protein disulfide isomerase activity;0.0295275279423982!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0295275279423982!GO:0045792;negative regulation of cell size;0.0301409230629358!GO:0008601;protein phosphatase type 2A regulator activity;0.0301983549584648!GO:0006779;porphyrin biosynthetic process;0.0301983549584648!GO:0033014;tetrapyrrole biosynthetic process;0.0301983549584648!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0301983549584648!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.0302343263830953!GO:0045039;protein import into mitochondrial inner membrane;0.0302343263830953!GO:0007569;cell aging;0.0310504942609882!GO:0006695;cholesterol biosynthetic process;0.0310504942609882!GO:0045936;negative regulation of phosphate metabolic process;0.0314513650329661!GO:0008629;induction of apoptosis by intracellular signals;0.0315624055076948!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.031760151549184!GO:0030833;regulation of actin filament polymerization;0.0318386663369059!GO:0043065;positive regulation of apoptosis;0.0320020332243123!GO:0051101;regulation of DNA binding;0.032600922169537!GO:0046426;negative regulation of JAK-STAT cascade;0.0329264406397751!GO:0001953;negative regulation of cell-matrix adhesion;0.0330367881206569!GO:0008610;lipid biosynthetic process;0.0331123609760602!GO:0030659;cytoplasmic vesicle membrane;0.0332520154521134!GO:0000209;protein polyubiquitination;0.0333091865404424!GO:0016408;C-acyltransferase activity;0.0333091865404424!GO:0043601;nuclear replisome;0.0333091865404424!GO:0030894;replisome;0.0333091865404424!GO:0051287;NAD binding;0.0333093254104491!GO:0000819;sister chromatid segregation;0.03335642294558!GO:0004248;stromelysin 1 activity;0.0333971611470149!GO:0008637;apoptotic mitochondrial changes;0.0336443311775876!GO:0030308;negative regulation of cell growth;0.033663671747936!GO:0043189;H4/H2A histone acetyltransferase complex;0.033726765403082!GO:0006007;glucose catabolic process;0.0342614705767449!GO:0000152;nuclear ubiquitin ligase complex;0.0346433918977124!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0356249941330873!GO:0050662;coenzyme binding;0.0357131743430045!GO:0042393;histone binding;0.035943869613721!GO:0000070;mitotic sister chromatid segregation;0.0368979639917263!GO:0008154;actin polymerization and/or depolymerization;0.0371391319461871!GO:0000781;chromosome, telomeric region;0.0373826565959582!GO:0046966;thyroid hormone receptor binding;0.0378848121624289!GO:0030911;TPR domain binding;0.0385942028289642!GO:0009967;positive regulation of signal transduction;0.0390621863817364!GO:0000159;protein phosphatase type 2A complex;0.0393860506404535!GO:0005100;Rho GTPase activator activity;0.0393860506404535!GO:0006505;GPI anchor metabolic process;0.0398616211851806!GO:0043492;ATPase activity, coupled to movement of substances;0.0398616211851806!GO:0009119;ribonucleoside metabolic process;0.0399647681945279!GO:0001952;regulation of cell-matrix adhesion;0.0399647681945279!GO:0005784;translocon complex;0.0401224615020537!GO:0043068;positive regulation of programmed cell death;0.0402548370910809!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0403603753147695!GO:0005732;small nucleolar ribonucleoprotein complex;0.0405989659686585!GO:0046128;purine ribonucleoside metabolic process;0.0413872933461644!GO:0042278;purine nucleoside metabolic process;0.0413872933461644!GO:0000077;DNA damage checkpoint;0.0423979918790079!GO:0030119;AP-type membrane coat adaptor complex;0.0431706837551191!GO:0000725;recombinational repair;0.0431706837551191!GO:0000724;double-strand break repair via homologous recombination;0.0431706837551191!GO:0035267;NuA4 histone acetyltransferase complex;0.0434357828324975!GO:0000175;3'-5'-exoribonuclease activity;0.0440883854580002!GO:0005680;anaphase-promoting complex;0.0443329661595559!GO:0006596;polyamine biosynthetic process;0.0444252605814383!GO:0032200;telomere organization and biogenesis;0.0451518279411009!GO:0000723;telomere maintenance;0.0451518279411009!GO:0008234;cysteine-type peptidase activity;0.0452650119823799!GO:0007040;lysosome organization and biogenesis;0.0452650119823799!GO:0005801;cis-Golgi network;0.0454191624930141!GO:0006541;glutamine metabolic process;0.0456332175858317!GO:0006360;transcription from RNA polymerase I promoter;0.0456954729129783!GO:0031326;regulation of cellular biosynthetic process;0.0456954729129783!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0460885079466594!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0461271274120874!GO:0006354;RNA elongation;0.0462377237982596!GO:0008287;protein serine/threonine phosphatase complex;0.0464255515585104!GO:0051271;negative regulation of cell motility;0.0465273659065637!GO:0030496;midbody;0.0468272002390357!GO:0043414;biopolymer methylation;0.0468517759294289!GO:0008475;procollagen-lysine 5-dioxygenase activity;0.048150080812157!GO:0005663;DNA replication factor C complex;0.0490704286989783
|sample_id=11356
|sample_note=
|sample_sex=female
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=adipose tissue
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|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11356-117H6;search_select_hide=table117:FF:11356-117H6
}}
}}

Latest revision as of 17:54, 4 June 2020

Name:Preadipocyte - subcutaneous, donor2
Species:Human (Homo sapiens)
Library ID:CNhs11981
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueadipose tissue
dev stage53 years old adult
sexfemale
age53
cell typepreadipocyte
cell lineNA
companyCell Applications
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot number1377
catalog numberCA802s-R10a
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00004847
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11981 CAGE DRX008414 DRR009286
Accession ID Hg19

Library idBAMCTSS
CNhs11981 DRZ000711 DRZ002096
Accession ID Hg38

Library idBAMCTSS
CNhs11981 DRZ012061 DRZ013446
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload

RNA-Seq Accession numbers
MethodSample accession id
sRNA-Seq  SAMD00004847
Library accession numbers

Library idMethodExp. accession idRun accession id
SRhi10009.CGTACG sRNA-Seq DRX037145 DRR041511
Accession ID Hg19

Library idBAMCTSS
SRhi10009.CGTACG DRZ007153


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.131
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.391
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.431
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.181
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.184
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140.0623
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.719
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.12
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.0908
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.444
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0.0623
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.453
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.248
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0.0623
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.405
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0.165
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.559
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.478
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0.378
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.658
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11981

Jaspar motifP-value
MA0002.20.351
MA0003.10.699
MA0004.10.654
MA0006.10.383
MA0007.10.323
MA0009.10.775
MA0014.10.296
MA0017.10.734
MA0018.25.49942e-7
MA0019.10.727
MA0024.10.0726
MA0025.10.00723
MA0027.10.673
MA0028.10.589
MA0029.10.675
MA0030.16.85814e-5
MA0031.16.18151e-4
MA0035.20.00634
MA0038.10.0385
MA0039.20.0368
MA0040.10.546
MA0041.10.696
MA0042.10.343
MA0043.12.1506e-9
MA0046.10.312
MA0047.20.164
MA0048.10.0207
MA0050.10.879
MA0051.10.915
MA0052.10.0419
MA0055.10.102
MA0057.10.225
MA0058.10.388
MA0059.10.0311
MA0060.10.00129
MA0061.10.608
MA0062.20.0172
MA0065.20.717
MA0066.10.339
MA0067.16.48901e-4
MA0068.10.0649
MA0069.10.107
MA0070.10.304
MA0071.10.702
MA0072.10.315
MA0073.10.834
MA0074.10.285
MA0076.10.658
MA0077.10.459
MA0078.10.919
MA0079.20.267
MA0080.23.91284e-7
MA0081.10.0537
MA0083.10.0609
MA0084.10.478
MA0087.10.304
MA0088.10.0115
MA0090.10.399
MA0091.10.0556
MA0092.10.266
MA0093.10.666
MA0099.20.937
MA0100.10.379
MA0101.10.189
MA0102.20.00358
MA0103.10.00556
MA0104.20.627
MA0105.10.00797
MA0106.10.0214
MA0107.10.179
MA0108.20.572
MA0111.10.992
MA0112.20.008
MA0113.10.748
MA0114.10.803
MA0115.10.921
MA0116.10.0149
MA0117.10.821
MA0119.10.0391
MA0122.10.116
MA0124.10.73
MA0125.10.24
MA0131.10.669
MA0135.10.386
MA0136.11.68972e-5
MA0137.20.429
MA0138.20.743
MA0139.10.846
MA0140.10.0921
MA0141.10.522
MA0142.10.984
MA0143.10.862
MA0144.10.858
MA0145.10.656
MA0146.10.398
MA0147.10.186
MA0148.10.25
MA0149.10.379
MA0150.10.16
MA0152.10.0502
MA0153.10.0534
MA0154.10.188
MA0155.10.923
MA0156.17.34047e-5
MA0157.10.0231
MA0159.10.739
MA0160.10.225
MA0162.10.27
MA0163.12.674e-6
MA0164.10.876
MA0258.10.607
MA0259.10.728



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11981

Novel motifP-value
10.176
100.0311
1000.76
1010.628
1020.805
1030.187
1040.82
1050.231
1060.162
1070.101
1080.418
1090.178
110.217
1100.0539
1110.211
1120.282
1130.00382
1140.368
1150.0163
1160.0249
1170.064
1180.941
1190.673
120.429
1200.0436
1210.858
1220.0129
1230.0575
1240.881
1250.1
1260.715
1270.799
1280.308
1290.902
130.676
1300.558
1310.16
1320.651
1330.0609
1340.983
1350.561
1360.78
1370.522
1380.426
1390.203
140.0846
1400.75
1410.598
1420.545
1430.103
1440.835
1450.575
1460.501
1470.0771
1480.0769
1490.163
150.998
1500.0714
1510.829
1520.0411
1530.829
1540.827
1550.0875
1560.744
1570.32
1580.00968
1590.315
160.0337
1600.0991
1610.39
1620.185
1630.795
1640.121
1650.75
1660.572
1670.747
1680.841
1690.0339
170.256
180.119
190.0182
20.268
200.579
210.00489
220.419
230.92
240.619
250.463
260.0685
270.235
280.176
290.0424
30.196
300.547
310.951
327.27825e-5
330.621
340.925
350.591
360.143
370.0753
380.882
390.211
40.896
400.149
410.26
420.614
430.626
440.0109
450.375
460.0728
470.301
480.27
490.91
50.695
500.643
510.583
520.8
530.358
540.947
550.583
560.687
570.885
580.656
590.0917
60.632
600.942
610.649
620.462
630.522
640.649
650.439
660.778
670.532
680.882
690.321
70.673
700.866
710.0401
720.961
730.0317
740.0167
750.0326
760.795
770.0471
780.989
790.0145
80.0442
800.158
810.732
820.645
830.161
840.558
850.689
860.568
870.0591
880.863
890.0657
90.289
900.76
910.862
920.619
930.626
940.571
950.0144
960.959
970.761
980.445
990.002



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11981


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)
0000057 (fibroblast)
0002334 (preadipocyte)
0002583 (subcutaneous preadipocyte)

UBERON: Anatomy
0000468 (multi-cellular organism)
0002199 (integument)
0002384 (connective tissue)
0000479 (tissue)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003102 (surface structure)
0010317 (germ layer / neural crest derived structure)
0002072 (hypodermis)
0002416 (integumental system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000137 (human preadipocyte sample)
0000142 (human subcutaneous preadipocyte sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)

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