FFCP PHASE1:Mm9::chr14:35355146..35355181,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=474 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:35355146..35355181,- | |||
|description=CAGE_peak_at_chr14:35355146..35355181,- | |description=CAGE_peak_at_chr14:35355146..35355181,- | ||
|id=chr14:35355146..35355181,- | |id=chr14:35355146..35355181,- | ||
|ontology_enrichment_celltype=CL:0002563!1.09e-10!9;CL:0002251!1.09e-10!9;CL:0000239!3.26e-07!6;CL:0000677!3.26e-07!6;CL:0000212!3.26e-07!6;CL:0000584!3.26e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.51e-21,9;CL:0002251,4.51e-21,9;CL:0000066,7.98e-13,25;CL:0002076,3.89e-12,15;CL:0000239,4.47e-12,6;CL:0000677,4.47e-12,6;CL:0000584,4.47e-12,6;CL:0002250,5.72e-11,3;CL:0000075,2.57e-10,7;CL:0000682,1.69e-09,3;CL:0000223,8.77e-09,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!5.73e-17!15;UBERON:0001242!1.03e-14!13;UBERON:0000060!1.03e-14!13;UBERON:0001262!1.03e-14!13;UBERON:0004786!1.03e-14!13;UBERON:0000160!7.16e-11!43;UBERON:0003350!1.09e-10!9;UBERON:0004808!1.09e-10!9;UBERON:0001277!1.09e-10!9;UBERON:0000485!5.31e-10!11;UBERON:0004923!1.50e-08!24;UBERON:0005409!9.01e-08!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,7.08e-38,15;UBERON:0000160,1.82e-35,31;UBERON:0001242,7.54e-32,13;UBERON:0001262,7.54e-32,13;UBERON:0004786,7.54e-32,13;UBERON:0005409,2.55e-24,47;UBERON:0004923,1.43e-22,24;UBERON:0003350,4.51e-21,9;UBERON:0004808,4.51e-21,9;UBERON:0001277,4.51e-21,9;UBERON:0000485,5.18e-17,11;UBERON:0002108,2.20e-12,4;UBERON:0000331,6.49e-10,3;UBERON:0002116,6.49e-10,3;UBERON:0001204,6.49e-10,3;UBERON:0001168,6.49e-10,3;UBERON:0001007,2.30e-09,116;UBERON:0001555,2.30e-09,116;UBERON:0007026,2.30e-09,116;UBERON:0004119,3.99e-09,118;UBERON:0000925,3.99e-09,118;UBERON:0006595,3.99e-09,118;UBERON:0001155,1.33e-07,2;UBERON:0000059,1.33e-07,2;UBERON:0001962,1.54e-07,2;UBERON:0001961,1.54e-07,2;UBERON:0001744,1.54e-07,2;UBERON:0001911,1.78e-07,2;UBERON:0000076,1.78e-07,2;UBERON:0005333,1.78e-07,2;UBERON:0008425,1.78e-07,2;UBERON:0005311,1.78e-07,2;UBERON:0004921,1.83e-07,114 | |||
|phase1_expression=0.320297694209588,3.14077866875425,0.909998478779072,1.20985684522732,2.00358291978539,8.05820505177071,7.94282978024787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4794089778857,8.71755268055246,1.72269589234506,6.03066794622705,7.75696437669201,5.70070258369122,7.30887376303799,10.4213340007993,0,0,0,24.2635360591071,33.08069442634,23.4794759701724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0.405017814995072,0.420649922702764,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.31958806090611,0,0,13.0283098156382,0,0,0,0,0,0.125654352112864,0,0,0,0,0.203678727700633,0,0,0,0,0,0,0.30140963567143,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0.462801338662135,0.697601834251224,0,0.116765342367169,0.658239399653922,0.492502392237286,0.243206428637567,0.730999937126662,0.219550115291051,0.402619256281115,0,0.102904612379284,1.65209391491899,7.40461586657924,0,0,0.128867461322093,0,0,0,2.37264530772256,0.329397909448022,0.251335208800269,0,0.38992817423824,4.49409704327111,5.83572734661674,4.18196673834171,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0.390267295715598,0,0,0.159454768657487,0,0.172684981865896,0,0,0,11.3105782794378,8.55403913544671,0,0,0,0,0,0,0,0.238968797952552,0.222798674082394,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70219802876894,0,0,0,0,0.178368817602071,0.987294123612726,0.608929898229199,0,0,0.220528398054962,0,0,0.301564624640779,0,0,2.04036585640896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0.165306911450672,0,1.55537967950151,0,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0.486213434136588,0,0,0,0,0,0,0,0,0,0.256100609619477,0.114870937911227,0,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0,0.25384382367503,0.182927972872773,0,0.135804113845862,0,0,0.0985044823755635,0.409231043169689,0,0.192906610981141,0.249810577937946,0,0,0.191288332068843,0,0.231867835620421 | |phase1_expression=0.320297694209588,3.14077866875425,0.909998478779072,1.20985684522732,2.00358291978539,8.05820505177071,7.94282978024787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4794089778857,8.71755268055246,1.72269589234506,6.03066794622705,7.75696437669201,5.70070258369122,7.30887376303799,10.4213340007993,0,0,0,24.2635360591071,33.08069442634,23.4794759701724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0.405017814995072,0.420649922702764,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.31958806090611,0,0,13.0283098156382,0,0,0,0,0,0.125654352112864,0,0,0,0,0.203678727700633,0,0,0,0,0,0,0.30140963567143,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0.462801338662135,0.697601834251224,0,0.116765342367169,0.658239399653922,0.492502392237286,0.243206428637567,0.730999937126662,0.219550115291051,0.402619256281115,0,0.102904612379284,1.65209391491899,7.40461586657924,0,0,0.128867461322093,0,0,0,2.37264530772256,0.329397909448022,0.251335208800269,0,0.38992817423824,4.49409704327111,5.83572734661674,4.18196673834171,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0.390267295715598,0,0,0.159454768657487,0,0.172684981865896,0,0,0,11.3105782794378,8.55403913544671,0,0,0,0,0,0,0,0.238968797952552,0.222798674082394,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70219802876894,0,0,0,0,0.178368817602071,0.987294123612726,0.608929898229199,0,0,0.220528398054962,0,0,0.301564624640779,0,0,2.04036585640896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0.165306911450672,0,1.55537967950151,0,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0.486213434136588,0,0,0,0,0,0,0,0,0,0.256100609619477,0.114870937911227,0,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0,0.25384382367503,0.182927972872773,0,0.135804113845862,0,0,0.0985044823755635,0.409231043169689,0,0.192906610981141,0.249810577937946,0,0,0.191288332068843,0,0.231867835620421 | ||
|short_description=p@chr14:35355146..35355181,- | |short_description=p@chr14:35355146..35355181,- | ||
}} | }} |
Latest revision as of 07:04, 4 August 2015
Short description: | p@chr14:35355146..35355181, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:35355146..35355181, - |
Coexpression cluster: | MCL_coexpression_mm9:474 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.51e-21 | 9 |
epithelial cell of alimentary canal | 4.51e-21 | 9 |
epithelial cell | 7.98e-13 | 25 |
endo-epithelial cell | 3.89e-12 | 15 |
brush border epithelial cell | 4.47e-12 | 6 |
gut absorptive cell | 4.47e-12 | 6 |
enterocyte | 4.47e-12 | 6 |
intestinal crypt stem cell | 5.72e-11 | 3 |
columnar/cuboidal epithelial cell | 2.57e-10 | 7 |
M cell of gut | 1.69e-09 | 3 |
endodermal cell | 8.77e-09 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 7.08e-38 | 15 |
intestine | 1.82e-35 | 31 |
intestinal mucosa | 7.54e-32 | 13 |
wall of intestine | 7.54e-32 | 13 |
gastrointestinal system mucosa | 7.54e-32 | 13 |
gastrointestinal system | 2.55e-24 | 47 |
organ component layer | 1.43e-22 | 24 |
epithelium of mucosa | 4.51e-21 | 9 |
gastrointestinal system epithelium | 4.51e-21 | 9 |
intestinal epithelium | 4.51e-21 | 9 |
simple columnar epithelium | 5.18e-17 | 11 |
small intestine | 2.20e-12 | 4 |
ileal mucosa | 6.49e-10 | 3 |
ileum | 6.49e-10 | 3 |
mucosa of small intestine | 6.49e-10 | 3 |
wall of small intestine | 6.49e-10 | 3 |
digestive system | 2.30e-09 | 116 |
digestive tract | 2.30e-09 | 116 |
primitive gut | 2.30e-09 | 116 |
endoderm-derived structure | 3.99e-09 | 118 |
endoderm | 3.99e-09 | 118 |
presumptive endoderm | 3.99e-09 | 118 |
colon | 1.33e-07 | 2 |
large intestine | 1.33e-07 | 2 |
gut-associated lymphoid tissue | 1.54e-07 | 2 |
mucosa-associated lymphoid tissue | 1.54e-07 | 2 |
lymphoid tissue | 1.54e-07 | 2 |
mammary gland | 1.78e-07 | 2 |
external ectoderm | 1.78e-07 | 2 |
mammary bud | 1.78e-07 | 2 |
mammary ridge | 1.78e-07 | 2 |
mammary placode | 1.78e-07 | 2 |
subdivision of digestive tract | 1.83e-07 | 114 |