FF:10277-104E7: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00005088 | ||
|accession_numbers=CAGE;DRX008696;DRR009568;DRZ000993;DRZ002378;DRZ012343;DRZ013728 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000941,UBERON:0003714,UBERON:0000479,UBERON:0004121,UBERON:0000064,UBERON:0010314,UBERON:0011216,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000063,UBERON:0005162,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0001785,UBERON:0002464,UBERON:0004904,UBERON:0000122,UBERON:0001021,UBERON:0004732,UBERON:0001032,UBERON:0010317,UBERON:0000010,UBERON:0001016,UBERON:0002104,UBERON:0004456 | |||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0011166 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/optic%2520nerve%252c%2520donor1.CNhs13449.10277-104E7.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/optic%2520nerve%252c%2520donor1.CNhs13449.10277-104E7.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/optic%2520nerve%252c%2520donor1.CNhs13449.10277-104E7.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/optic%2520nerve%252c%2520donor1.CNhs13449.10277-104E7.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/optic%2520nerve%252c%2520donor1.CNhs13449.10277-104E7.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10277-104E7 | |id=FF:10277-104E7 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0011166 | ||
|is_obsolete= | |||
|library_id=CNhs13449 | |||
|library_id_phase_based=2:CNhs13449 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10277 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10277 | |||
|name=optic nerve, donor1 | |name=optic nerve, donor1 | ||
|namespace= | |namespace= | ||
| Line 42: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs13449,LSID1024,release012,COMPLETED | |profile_hcage=CNhs13449,LSID1024,release012,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0,0,0,0.224875951126146,0,0.822798206707625,0.927209253379799,0,0,0,0,0,0,0,0,0,0,0,0.385193981212532,0,0.43274512657309,0,0,0,0.455271410490811,0,-0.0979578962680575,0,0,0.777586231202761,0,0,0,0,0,0,0,0,0,0,0.385193981212532,0,0.506236008920346,0.332457528633012,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0.385193981212532,0,0.106219634353586,0,0.288201619969926,0,0,0.287850353999435,0,0,0,0,0,0,0,0,0.385193981212532,0,0,0,0,0.385193981212532,0,0,0,0,0.385193981212532,0,0,0,0,0.0774480881000587,0.033496487653744,0.554040691351988,0,0.134533420766196,0.380380316005518,0.173996578516663,0.413386397560565,0.586068136921517,0.192596990606266,0.722887401491444,-0.0980353512377064,0.453541014467488,0,0,0,0,0,0,0,0,0,0,0,0.385193981212532,0,0,0,0,0,-0.096373593922461,0,0,0,0.586068136921517,0.671802478929358,0.385193981212532,0,0,0.385193981212532,0,0 | |||
|repeat_enrich_byname=0,0,0,0,-0.0980353512377064,0,0.722887401491444,0.385193981212532,0,0.385193981212532,0.385193981212532,0.722887401491444,0,0.586068136921517,0,0,0.338889261635953,0.121972379177194,0.62008969969029,0.24167883868906,0,0,-0.0658353861638485,0,0.385193981212532,0,0.385193981212532,0.385193981212532,0,0,0,0,-0.128119866952565,0,1.0910136351649,0,0,0,0,-0.0186252810838506,0.675265646325574,0,0.316110877462481,0.517723875844149,0,0,0,0,0.0227933991264345,0,0.602007917697703,0.827822652658206,1.07741868855297,0.036032408671522,0.338389322320152,0,0,0.192596990606266,1.03604776139338,-0.432310776471371,0,0,0.425308107469275,0.1116844499001,0,0,0.519498239429989,0,-0.178484682126283,-0.188428308485383,0,0,0,0,0,0,0.192596990606266,0.385193981212532,0,0,0,0.192596990606266,0,-0.0574934668214365,-0.326988596678969,0,0,0,0,0.425361785497415,0.278532069695426,0,-0.373286155956567,-0.350736013296859,0.151202186780547,0.217231006107416,0,0.524383068111216,0.214958814260022,0.470866186547643,0.380380316005518,0.438666287550379,0.720561101431776,0,0.366525056601913,-0.200204492192494,0,-0.114970808455141,0.150505324553926,0.297982915168496,0.648923917106078,0.385193981212532,0.385193981212532,0,0.215594089986552,0.036219316441539,0.266862325329501,-0.104920733264242,0.150648815756047,0.221546286283262,0.298920949781463,-0.258194148846471,-0.00724275047557055,1.57299107265747,0.583713726311609,0.0942629079281875,0.353257773402587,0.0617163005218937,0,0.249032360214553,-0.022256501601236,-0.400718125894791,-0.615826173178679,0,-0.098783480598449,0.316849720135163,0.458223447640434,0.051678827645388,0.0180551591667482,0,0,-0.19358324965888,0.385193981212532,0,-0.0516761107225903,0.278017241341742,0.586068136921517,0.151031992619745,1.02508344440902,0.353212575365973,0,0.0249715206491784,0.068677924233652,0.0641576203931355,0.2318736576982,0.136793203825856,-0.146009897457394,0,0.248517644960997,0.102781559995172,0.371473553045855,0.21388095203351,0.148736415108965,-0.0372008241792058,1.34417218864239,0.25026594344825,0.118392143370804,-0.106603413907493,-0.202871727868709,0.0480793955560297,1.00604908596701,0.0979657143727178,0.607558787169752,0.976202219044704,0.277269606219894,0.00253823269194545,0,0.36839077582085,1.85099534310194,-0.024890887268191,0,-0.157078729175427,-0.54043375147324,0.146778762340831,0.415407237334343,0,0.558029337362161,0.503238459623874,0.344249858919458,-0.135723143846782,0.000628233760540135,0,-0.150367083334639,0.728790824785862,0.536655051086981,0.222454244066527,0.134511017923687,0.251070020818547,0,0,0.083929806743088,-0.235476037764389,0.82677279512113,0.513605270484341,0.817283877085049,0.960359546243893,0.269222907777598,0.722887401491444,0,-0.260506356780193,0.033292535303479,0.82677279512113,0.220844731303099,0.729257888207174,-0.0337151870371162,0.469561060004688,0,0.704986348610605,0,0,-0.177527765965176,0.385193981212532,0.279613413912402,0,0,0.163505100961741,0,0,0.782287793719595,0.586068136921517,-0.00266869995149846,0.487566788519191,0,0,0,0,0,0,0.733599316098727,0.0303606509960836,0,-0.295462287064444,0.192596990606266,0,0,0,0,0.104607530516752,0,0,-0.765558043698547,0.0950100924633985,-0.12301741567642,0,0.192596990606266,0,0,0.169470578659057,0.181957419117808,0.385193981212532,0.2533312747149,0,0,0,0.385193981212532,0.29905299142332,0,0,0.293034068460759,0,0.923007420170318,0.634819526127474,0,0,0.293034068460759,0.907082028934975,0,0,0,0,-0.0328554354632322,0,0,-0.246736192173848,0.0518391521904699,0.207903489209598,0.30361210166569,0,-0.451339285529348,-0.732184985010917,0.0409264051788563,0,0,0.123846849422644,0,0,-0.650750340420716,0.302823758246865,0,0.192596990606266,0,0,0,0,0,0.385193981212532,0.508572889091688,0,0,0,0,0.385193981212532,0,0,0,0,0,0,0.343644805433027,0.292969924554021,0,0,0,0,0,0,0.385193981212532,0.361087958133628,0.124818889511659,0,0.385193981212532,0,0,0,0.385193981212532,0.385193981212532,0,0.251461461828202,0,0,0.868657808051376,0,0,0.288201619969926,0,0,0,0,1.26835036983808,0,0,0.308706004728003,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261874895177084,0.822798206707625,0,0.385193981212532,0,0,0,0,0,2.38454511832979,0,0.586068136921517,0,0,1.41550704974662,0,0,0,-0.104796384789156,0,0.224875951126146,0,0,0.385193981212532,0.192596990606266,0,0,0,0,0,0,0,0,0,0,0.192596990606266,0,0,0,0.385193981212532,0,0,-0.537527259121542,0.231732530356998,0.0531002074243455,0.280216513957266,0,0,0.060405715827717,0,0,0,0,0,0,-0.031340424028527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109483855201369,0,0,0,0,0,0,0,-0.0979578962680575,0,0,-0.0920328098005262,0,0,0,0,0,0,-0.0953798500504435,0.00981366863761099,0.168164600953062,0,0,0.385193981212532,0.307058128263267,0.385193981212532,0,0.074342593290531,0,-0.0667773874189013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43274512657309,0,0,0,0,0,0,0,0,0,0,0,0,0.192596990606266,0,0,0,0,0,1.06766304882525,0,0,0,0,0,0,0.385193981212532,0,0,1.39856326871022,0,0,0,0,0,0,0.1585856273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| |||
|rna_box=104 | |rna_box=104 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 54: | Line 76: | ||
|rna_rin=5.1 | |rna_rin=5.1 | ||
|rna_sample_type=total RNA | |rna_sample_type=total RNA | ||
|rna_tube_id= | |rna_tube_id=1.04E+09 | ||
|rna_weight_ug=5.43132 | |rna_weight_ug=5.43132 | ||
|sample_age= | |sample_age= | ||
|sample_category=tissues | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 92: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.23525702361377e-247!GO:0005737;cytoplasm;9.61403117162617e-150!GO:0043226;organelle;9.62245446870605e-123!GO:0043229;intracellular organelle;2.14269601345118e-122!GO:0043227;membrane-bound organelle;1.89049576482255e-111!GO:0043231;intracellular membrane-bound organelle;1.89049576482255e-111!GO:0044444;cytoplasmic part;1.82986684471535e-97!GO:0044422;organelle part;1.16056209960431e-77!GO:0044446;intracellular organelle part;9.06821451677562e-77!GO:0005515;protein binding;4.82065747132646e-65!GO:0032991;macromolecular complex;8.89153906466344e-55!GO:0003723;RNA binding;5.37979476212152e-43!GO:0016043;cellular component organization and biogenesis;2.37380183264436e-42!GO:0044238;primary metabolic process;6.27541021646376e-42!GO:0030529;ribonucleoprotein complex;1.76112843905882e-40!GO:0044237;cellular metabolic process;2.23473833767443e-40!GO:0033036;macromolecule localization;4.34329931000175e-40!GO:0015031;protein transport;2.04386077977701e-39!GO:0031090;organelle membrane;9.07363071388167e-39!GO:0005739;mitochondrion;1.55545265467698e-37!GO:0043170;macromolecule metabolic process;2.64571408865796e-37!GO:0043233;organelle lumen;1.11954935595065e-36!GO:0031974;membrane-enclosed lumen;1.11954935595065e-36!GO:0044428;nuclear part;1.35485918650986e-36!GO:0008104;protein localization;1.37587977996019e-36!GO:0045184;establishment of protein localization;9.10380208193932e-36!GO:0005634;nucleus;9.10380208193932e-36!GO:0046907;intracellular transport;7.93444140415874e-31!GO:0043234;protein complex;2.08209325648566e-29!GO:0019538;protein metabolic process;2.59559929161331e-29!GO:0016071;mRNA metabolic process;2.70931539573735e-27!GO:0031975;envelope;4.5510395039747e-27!GO:0031967;organelle envelope;8.18185046776057e-27!GO:0044429;mitochondrial part;8.91368024973995e-27!GO:0006396;RNA processing;1.3509425031228e-26!GO:0044260;cellular macromolecule metabolic process;4.03905074953091e-26!GO:0044267;cellular protein metabolic process;2.27964792980974e-25!GO:0006886;intracellular protein transport;3.51928092975628e-24!GO:0008380;RNA splicing;2.00217403188814e-23!GO:0043283;biopolymer metabolic process;5.57752466105794e-23!GO:0005829;cytosol;6.04148607666719e-23!GO:0031981;nuclear lumen;9.36286095005031e-22!GO:0006996;organelle organization and biogenesis;1.12575468252822e-21!GO:0006397;mRNA processing;1.24053734588955e-21!GO:0051649;establishment of cellular localization;8.51447529182014e-21!GO:0051641;cellular localization;9.69199933799336e-21!GO:0005840;ribosome;1.74112671759424e-19!GO:0065003;macromolecular complex assembly;2.24153338053894e-18!GO:0009058;biosynthetic process;2.63029373905523e-18!GO:0005740;mitochondrial envelope;4.08351521588048e-18!GO:0006412;translation;7.25817617544336e-18!GO:0016192;vesicle-mediated transport;1.02126149798931e-17!GO:0031966;mitochondrial membrane;2.56290132336532e-17!GO:0019866;organelle inner membrane;2.99153676922907e-17!GO:0010467;gene expression;4.6771798048962e-17!GO:0022607;cellular component assembly;4.97167437364511e-17!GO:0005794;Golgi apparatus;8.61678116944397e-17!GO:0012505;endomembrane system;1.07188829591478e-16!GO:0005681;spliceosome;2.75712978142278e-16!GO:0006119;oxidative phosphorylation;3.1242046952375e-16!GO:0033279;ribosomal subunit;8.24298318612509e-16!GO:0003735;structural constituent of ribosome;9.36696767283664e-16!GO:0000166;nucleotide binding;1.03665186404696e-15!GO:0005743;mitochondrial inner membrane;1.26543304581827e-15!GO:0006512;ubiquitin cycle;2.93502576068149e-15!GO:0009059;macromolecule biosynthetic process;4.26187986814622e-15!GO:0005654;nucleoplasm;8.18136042354712e-15!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.44624927877834e-14!GO:0016874;ligase activity;1.56933008264136e-14!GO:0016817;hydrolase activity, acting on acid anhydrides;1.62481753380628e-14!GO:0016462;pyrophosphatase activity;1.73366697446639e-14!GO:0044249;cellular biosynthetic process;2.07798635968898e-14!GO:0043228;non-membrane-bound organelle;2.1224265232026e-14!GO:0043232;intracellular non-membrane-bound organelle;2.1224265232026e-14!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.14967980211219e-14!GO:0005830;cytosolic ribosome (sensu Eukaryota);5.07234825354253e-14!GO:0044451;nucleoplasm part;1.11323023980001e-13!GO:0051603;proteolysis involved in cellular protein catabolic process;1.13888935675933e-13!GO:0044257;cellular protein catabolic process;1.33047770924225e-13!GO:0017111;nucleoside-triphosphatase activity;1.45276656226273e-13!GO:0019941;modification-dependent protein catabolic process;1.91426536541079e-13!GO:0043632;modification-dependent macromolecule catabolic process;1.91426536541079e-13!GO:0006511;ubiquitin-dependent protein catabolic process;1.93415543980081e-13!GO:0044455;mitochondrial membrane part;3.73486903735376e-13!GO:0043412;biopolymer modification;3.78940682985954e-13!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.08145563719505e-13!GO:0005783;endoplasmic reticulum;4.8768546485902e-13!GO:0022618;protein-RNA complex assembly;1.63266446635403e-12!GO:0005746;mitochondrial respiratory chain;2.44139324093654e-12!GO:0044265;cellular macromolecule catabolic process;2.44139324093654e-12!GO:0006464;protein modification process;3.56219639692545e-12!GO:0050136;NADH dehydrogenase (quinone) activity;3.76261581836567e-12!GO:0003954;NADH dehydrogenase activity;3.76261581836567e-12!GO:0008137;NADH dehydrogenase (ubiquinone) activity;3.76261581836567e-12!GO:0043285;biopolymer catabolic process;6.44262073354677e-12!GO:0044445;cytosolic part;8.22850050777412e-12!GO:0008092;cytoskeletal protein binding;1.39048803838016e-11!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.6408170088116e-11!GO:0048193;Golgi vesicle transport;2.30118688929976e-11!GO:0043687;post-translational protein modification;3.1485547881582e-11!GO:0006457;protein folding;3.21063766410238e-11!GO:0006605;protein targeting;3.39979856571667e-11!GO:0008134;transcription factor binding;3.78923172735067e-11!GO:0031982;vesicle;6.6191466765356e-11!GO:0031980;mitochondrial lumen;6.6191466765356e-11!GO:0005759;mitochondrial matrix;6.6191466765356e-11!GO:0008135;translation factor activity, nucleic acid binding;8.58978967074612e-11!GO:0048770;pigment granule;8.64161691192183e-11!GO:0042470;melanosome;8.64161691192183e-11!GO:0030163;protein catabolic process;1.16920566884388e-10!GO:0030964;NADH dehydrogenase complex (quinone);1.21831096313177e-10!GO:0045271;respiratory chain complex I;1.21831096313177e-10!GO:0005747;mitochondrial respiratory chain complex I;1.21831096313177e-10!GO:0031410;cytoplasmic vesicle;1.71699816855294e-10!GO:0032553;ribonucleotide binding;1.72854679274615e-10!GO:0032555;purine ribonucleotide binding;1.72854679274615e-10!GO:0008565;protein transporter activity;1.74827591846665e-10!GO:0017076;purine nucleotide binding;1.90066886958425e-10!GO:0042775;organelle ATP synthesis coupled electron transport;2.51625725479959e-10!GO:0042773;ATP synthesis coupled electron transport;2.51625725479959e-10!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;3.83147919185437e-10!GO:0005768;endosome;5.00523579602892e-10!GO:0044248;cellular catabolic process;9.54927724359699e-10!GO:0016604;nuclear body;1.21169045448916e-09!GO:0031988;membrane-bound vesicle;1.56162856079411e-09!GO:0009057;macromolecule catabolic process;2.03045796937926e-09!GO:0005635;nuclear envelope;2.56451648001717e-09!GO:0051082;unfolded protein binding;3.05837079719358e-09!GO:0006413;translational initiation;3.69968052360463e-09!GO:0016023;cytoplasmic membrane-bound vesicle;4.0364973437816e-09!GO:0044432;endoplasmic reticulum part;4.54969705720419e-09!GO:0016607;nuclear speck;5.58423480310547e-09!GO:0031965;nuclear membrane;5.65124214956991e-09!GO:0016070;RNA metabolic process;6.52826975066146e-09!GO:0003743;translation initiation factor activity;6.72570547334043e-09!GO:0008639;small protein conjugating enzyme activity;7.70267909951178e-09!GO:0003676;nucleic acid binding;1.02711122606892e-08!GO:0000502;proteasome complex (sensu Eukaryota);1.38907349897584e-08!GO:0004842;ubiquitin-protein ligase activity;1.51021695281854e-08!GO:0019787;small conjugating protein ligase activity;1.57312050740184e-08!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.71471618407678e-08!GO:0030036;actin cytoskeleton organization and biogenesis;1.7951598771284e-08!GO:0016044;membrane organization and biogenesis;1.91944145643373e-08!GO:0015935;small ribosomal subunit;2.26618929973629e-08!GO:0007010;cytoskeleton organization and biogenesis;2.58633907394209e-08!GO:0048523;negative regulation of cellular process;2.96188456711086e-08!GO:0015934;large ribosomal subunit;3.14717942648784e-08!GO:0006446;regulation of translational initiation;3.82715495479689e-08!GO:0000398;nuclear mRNA splicing, via spliceosome;4.21933906541694e-08!GO:0000375;RNA splicing, via transesterification reactions;4.21933906541694e-08!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;4.21933906541694e-08!GO:0044431;Golgi apparatus part;4.44972469146152e-08!GO:0005083;small GTPase regulator activity;5.50782058061983e-08!GO:0006913;nucleocytoplasmic transport;6.93980230930161e-08!GO:0030695;GTPase regulator activity;8.09438435779189e-08!GO:0051169;nuclear transport;1.01211794381357e-07!GO:0015631;tubulin binding;1.06969690311868e-07!GO:0016881;acid-amino acid ligase activity;1.33018960813553e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.43059811775083e-07!GO:0030029;actin filament-based process;1.63860240680763e-07!GO:0016887;ATPase activity;1.69323147530402e-07!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.77746964518642e-07!GO:0042175;nuclear envelope-endoplasmic reticulum network;2.49446980545792e-07!GO:0031252;leading edge;2.63755944205573e-07!GO:0006793;phosphorus metabolic process;2.79462910045514e-07!GO:0006796;phosphate metabolic process;2.79462910045514e-07!GO:0005730;nucleolus;2.85291487990031e-07!GO:0044453;nuclear membrane part;3.04099501326172e-07!GO:0019899;enzyme binding;3.27230592126534e-07!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;3.42141027793772e-07!GO:0042623;ATPase activity, coupled;4.00917914607202e-07!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);4.15339309117048e-07!GO:0006461;protein complex assembly;4.32852149135661e-07!GO:0005789;endoplasmic reticulum membrane;4.85851517864005e-07!GO:0032559;adenyl ribonucleotide binding;5.15210385353358e-07!GO:0007264;small GTPase mediated signal transduction;5.65937825152127e-07!GO:0030554;adenyl nucleotide binding;6.52495023864896e-07!GO:0048519;negative regulation of biological process;7.23263116744997e-07!GO:0005524;ATP binding;9.49862418614894e-07!GO:0006259;DNA metabolic process;9.57175495658829e-07!GO:0017038;protein import;1.19879470010643e-06!GO:0019829;cation-transporting ATPase activity;1.34936799437137e-06!GO:0015630;microtubule cytoskeleton;1.69061841523481e-06!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.15438045198968e-06!GO:0003924;GTPase activity;2.23935128241055e-06!GO:0048471;perinuclear region of cytoplasm;2.32194286323705e-06!GO:0005769;early endosome;2.74498829267683e-06!GO:0045786;negative regulation of progression through cell cycle;2.93926795610238e-06!GO:0003712;transcription cofactor activity;3.32458444540412e-06!GO:0005643;nuclear pore;3.45491590861958e-06!GO:0050794;regulation of cellular process;4.28085660451168e-06!GO:0000139;Golgi membrane;5.1138674808439e-06!GO:0044440;endosomal part;5.39447300982149e-06!GO:0010008;endosome membrane;5.39447300982149e-06!GO:0008017;microtubule binding;6.18434536328704e-06!GO:0051186;cofactor metabolic process;6.95463352015457e-06!GO:0006403;RNA localization;9.65619260868931e-06!GO:0016564;transcription repressor activity;1.10892138784328e-05!GO:0003779;actin binding;1.12246767036763e-05!GO:0050657;nucleic acid transport;1.19420836474024e-05!GO:0051236;establishment of RNA localization;1.19420836474024e-05!GO:0050658;RNA transport;1.19420836474024e-05!GO:0050789;regulation of biological process;1.27137858042319e-05!GO:0005770;late endosome;1.47531013810656e-05!GO:0006897;endocytosis;1.53912584887097e-05!GO:0010324;membrane invagination;1.53912584887097e-05!GO:0015986;ATP synthesis coupled proton transport;1.6227276500085e-05!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.6227276500085e-05!GO:0009056;catabolic process;1.79877138244253e-05!GO:0048475;coated membrane;1.87386877326305e-05!GO:0030117;membrane coat;1.87386877326305e-05!GO:0006325;establishment and/or maintenance of chromatin architecture;1.87812179911356e-05!GO:0051246;regulation of protein metabolic process;2.31134758229046e-05!GO:0012501;programmed cell death;2.40176190629074e-05!GO:0016469;proton-transporting two-sector ATPase complex;2.65699463566153e-05!GO:0005525;GTP binding;2.67525401549851e-05!GO:0006915;apoptosis;2.93474932641821e-05!GO:0016568;chromatin modification;2.93474932641821e-05!GO:0006888;ER to Golgi vesicle-mediated transport;3.27749711708059e-05!GO:0008219;cell death;4.20023532209839e-05!GO:0016265;death;4.20023532209839e-05!GO:0009055;electron carrier activity;4.7781926991851e-05!GO:0000151;ubiquitin ligase complex;4.8722109731198e-05!GO:0051128;regulation of cellular component organization and biogenesis;5.35066724027747e-05!GO:0005761;mitochondrial ribosome;5.35566503992752e-05!GO:0000313;organellar ribosome;5.35566503992752e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;5.81710730483171e-05!GO:0030120;vesicle coat;6.22125544149543e-05!GO:0030662;coated vesicle membrane;6.22125544149543e-05!GO:0005096;GTPase activator activity;6.52466494783126e-05!GO:0051170;nuclear import;6.71812353067417e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;6.85715183344523e-05!GO:0015399;primary active transmembrane transporter activity;6.85715183344523e-05!GO:0007265;Ras protein signal transduction;6.86624319938407e-05!GO:0005905;coated pit;7.20714778925817e-05!GO:0006323;DNA packaging;7.47632621730127e-05!GO:0006606;protein import into nucleus;7.73356689030193e-05!GO:0016310;phosphorylation;7.97721184007691e-05!GO:0015078;hydrogen ion transmembrane transporter activity;8.28284123612357e-05!GO:0006163;purine nucleotide metabolic process;8.5439890598948e-05!GO:0032446;protein modification by small protein conjugation;9.17678846311423e-05!GO:0046034;ATP metabolic process;9.39239871279813e-05!GO:0008287;protein serine/threonine phosphatase complex;0.000100771024643002!GO:0006164;purine nucleotide biosynthetic process;0.000107012811463738!GO:0009150;purine ribonucleotide metabolic process;0.000112577623145442!GO:0051028;mRNA transport;0.00011509217489718!GO:0009259;ribonucleotide metabolic process;0.000118249702905203!GO:0005798;Golgi-associated vesicle;0.000122566694492949!GO:0009060;aerobic respiration;0.000129460786964091!GO:0043566;structure-specific DNA binding;0.000129460786964091!GO:0006366;transcription from RNA polymerase II promoter;0.000129460786964091!GO:0009152;purine ribonucleotide biosynthetic process;0.000134544985171963!GO:0007049;cell cycle;0.000147835643281056!GO:0031901;early endosome membrane;0.000152568679690183!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000157108966185919!GO:0008026;ATP-dependent helicase activity;0.000173048725397821!GO:0003714;transcription corepressor activity;0.000177853352517316!GO:0006754;ATP biosynthetic process;0.00017805709597809!GO:0006753;nucleoside phosphate metabolic process;0.00017805709597809!GO:0046930;pore complex;0.000183563209306296!GO:0045259;proton-transporting ATP synthase complex;0.000184406741836439!GO:0016567;protein ubiquitination;0.000213019685665517!GO:0032561;guanyl ribonucleotide binding;0.000226051954685944!GO:0019001;guanyl nucleotide binding;0.000226051954685944!GO:0043492;ATPase activity, coupled to movement of substances;0.000233950481501722!GO:0008047;enzyme activator activity;0.000240733602516403!GO:0008654;phospholipid biosynthetic process;0.000249052671998945!GO:0005099;Ras GTPase activator activity;0.00024971310735994!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.00025476326292407!GO:0009260;ribonucleotide biosynthetic process;0.000263236808464492!GO:0005773;vacuole;0.000274442869185365!GO:0004386;helicase activity;0.000275379433648009!GO:0009199;ribonucleoside triphosphate metabolic process;0.000291802523598262!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000295643251003646!GO:0009892;negative regulation of metabolic process;0.000306659461319452!GO:0005813;centrosome;0.000315380718455811!GO:0009205;purine ribonucleoside triphosphate metabolic process;0.000315380718455811!GO:0009144;purine nucleoside triphosphate metabolic process;0.000315380718455811!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000351658737228514!GO:0016791;phosphoric monoester hydrolase activity;0.000351658737228514!GO:0009141;nucleoside triphosphate metabolic process;0.000368998849280514!GO:0045333;cellular respiration;0.000392987919331954!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.00048695186917023!GO:0001726;ruffle;0.000491381448635018!GO:0045045;secretory pathway;0.000504976633840384!GO:0005793;ER-Golgi intermediate compartment;0.000522781425770013!GO:0051726;regulation of cell cycle;0.000528579393030609!GO:0000159;protein phosphatase type 2A complex;0.00055431646460491!GO:0005874;microtubule;0.000564421014784608!GO:0004721;phosphoprotein phosphatase activity;0.000590308537552188!GO:0031324;negative regulation of cellular metabolic process;0.000612073432266286!GO:0030027;lamellipodium;0.000630771360382516!GO:0000074;regulation of progression through cell cycle;0.000632443295466116!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000635474489568844!GO:0030133;transport vesicle;0.000647559043249599!GO:0031072;heat shock protein binding;0.000672248353462705!GO:0016197;endosome transport;0.000694888388697319!GO:0009142;nucleoside triphosphate biosynthetic process;0.000704037006877937!GO:0009201;ribonucleoside triphosphate biosynthetic process;0.000704037006877937!GO:0000245;spliceosome assembly;0.00070602335345846!GO:0006402;mRNA catabolic process;0.000707913830459156!GO:0065002;intracellular protein transport across a membrane;0.000746407512216142!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;0.000755583261354291!GO:0009145;purine nucleoside triphosphate biosynthetic process;0.000755583261354291!GO:0043623;cellular protein complex assembly;0.000755583261354291!GO:0051188;cofactor biosynthetic process;0.000883894746692949!GO:0009966;regulation of signal transduction;0.000901153869644383!GO:0005815;microtubule organizing center;0.000904693778050922!GO:0051056;regulation of small GTPase mediated signal transduction;0.000963130406539546!GO:0000323;lytic vacuole;0.0010430287676876!GO:0005764;lysosome;0.0010430287676876!GO:0003724;RNA helicase activity;0.00105125422218566!GO:0008601;protein phosphatase type 2A regulator activity;0.00107200259411202!GO:0008361;regulation of cell size;0.00118183291724956!GO:0016311;dephosphorylation;0.00118978051572209!GO:0006613;cotranslational protein targeting to membrane;0.00119927163051184!GO:0006099;tricarboxylic acid cycle;0.00126533722418817!GO:0046356;acetyl-CoA catabolic process;0.00126533722418817!GO:0051276;chromosome organization and biogenesis;0.00126533722418817!GO:0051087;chaperone binding;0.00130416928645884!GO:0030532;small nuclear ribonucleoprotein complex;0.00144368950829156!GO:0030041;actin filament polymerization;0.00148966074241367!GO:0008154;actin polymerization and/or depolymerization;0.00150393005465963!GO:0016481;negative regulation of transcription;0.00150492382608361!GO:0030867;rough endoplasmic reticulum membrane;0.00160436828512731!GO:0006732;coenzyme metabolic process;0.00167098371820436!GO:0005791;rough endoplasmic reticulum;0.00171293987168723!GO:0006650;glycerophospholipid metabolic process;0.00173278048168377!GO:0042802;identical protein binding;0.00179941758819918!GO:0046467;membrane lipid biosynthetic process;0.00180301303219175!GO:0005100;Rho GTPase activator activity;0.00188675879376439!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00193874187112971!GO:0005839;proteasome core complex (sensu Eukaryota);0.00202989295109652!GO:0005875;microtubule associated complex;0.00211048557822532!GO:0007019;microtubule depolymerization;0.00212457328047082!GO:0019208;phosphatase regulator activity;0.00216041970332331!GO:0043209;myelin sheath;0.00226837349009295!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00238090395499147!GO:0065007;biological regulation;0.00245214470840541!GO:0006916;anti-apoptosis;0.00253195839254627!GO:0016049;cell growth;0.00260667240816974!GO:0000059;protein import into nucleus, docking;0.00260800372388968!GO:0045892;negative regulation of transcription, DNA-dependent;0.00266763460026484!GO:0009117;nucleotide metabolic process;0.00270876510758487!GO:0030118;clathrin coat;0.00281142097732366!GO:0019867;outer membrane;0.0029349470821557!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.00307865761166856!GO:0019783;small conjugating protein-specific protease activity;0.00320492744464675!GO:0030132;clathrin coat of coated pit;0.00320668273070303!GO:0030865;cortical cytoskeleton organization and biogenesis;0.00334799444683965!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.00334799444683965!GO:0004812;aminoacyl-tRNA ligase activity;0.00334799444683965!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.00334799444683965!GO:0043069;negative regulation of programmed cell death;0.00336981776456951!GO:0009109;coenzyme catabolic process;0.00336981776456951!GO:0006084;acetyl-CoA metabolic process;0.00341936039307728!GO:0051187;cofactor catabolic process;0.00356944828589527!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00367404018536427!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00367404018536427!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00367404018536427!GO:0004843;ubiquitin-specific protease activity;0.00372652294665381!GO:0043066;negative regulation of apoptosis;0.00388782161605893!GO:0043087;regulation of GTPase activity;0.00393285105500418!GO:0003697;single-stranded DNA binding;0.00424945721483653!GO:0046578;regulation of Ras protein signal transduction;0.00428563460142658!GO:0006333;chromatin assembly or disassembly;0.00438503347661258!GO:0022890;inorganic cation transmembrane transporter activity;0.00460355781703855!GO:0031902;late endosome membrane;0.00489190169584452!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.00497349912206606!GO:0031968;organelle outer membrane;0.00497349912206606!GO:0031111;negative regulation of microtubule polymerization or depolymerization;0.00498462110954745!GO:0004221;ubiquitin thiolesterase activity;0.00511631228276101!GO:0003690;double-stranded DNA binding;0.00519843083956697!GO:0005741;mitochondrial outer membrane;0.00529193987164266!GO:0030866;cortical actin cytoskeleton organization and biogenesis;0.00533824915847186!GO:0006470;protein amino acid dephosphorylation;0.0053578789710048!GO:0008286;insulin receptor signaling pathway;0.0053578789710048!GO:0001666;response to hypoxia;0.00553983499808435!GO:0048487;beta-tubulin binding;0.00565292277511873!GO:0042254;ribosome biogenesis and assembly;0.00582149860621359!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00583163463479679!GO:0045187;regulation of circadian sleep/wake cycle, sleep;0.00587962408632092!GO:0004667;prostaglandin-D synthase activity;0.00587962408632092!GO:0050802;circadian sleep/wake cycle, sleep;0.00587962408632092!GO:0022410;circadian sleep/wake cycle process;0.00587962408632092!GO:0042749;regulation of circadian sleep/wake cycle;0.00587962408632092!GO:0043038;amino acid activation;0.00588016145973418!GO:0006418;tRNA aminoacylation for protein translation;0.00588016145973418!GO:0043039;tRNA aminoacylation;0.00588016145973418!GO:0008610;lipid biosynthetic process;0.00591828719422632!GO:0005667;transcription factor complex;0.00611647130861986!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00620691640324342!GO:0019888;protein phosphatase regulator activity;0.00636431245017328!GO:0051168;nuclear export;0.00656064573734791!GO:0008139;nuclear localization sequence binding;0.00664321470623582!GO:0006643;membrane lipid metabolic process;0.00669872941375084!GO:0007272;ensheathment of neurons;0.00671352563037469!GO:0008366;axon ensheathment;0.00671352563037469!GO:0006974;response to DNA damage stimulus;0.0067207675398687!GO:0031114;regulation of microtubule depolymerization;0.00674368555582646!GO:0007026;negative regulation of microtubule depolymerization;0.00674368555582646!GO:0016740;transferase activity;0.00706244167215622!GO:0006891;intra-Golgi vesicle-mediated transport;0.00739383365069699!GO:0050811;GABA receptor binding;0.00744608751453836!GO:0003729;mRNA binding;0.00791826390198872!GO:0000902;cell morphogenesis;0.00809209412553882!GO:0032989;cellular structure morphogenesis;0.00809209412553882!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00838653796783102!GO:0005938;cell cortex;0.00838653796783102!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00841886170813594!GO:0006607;NLS-bearing substrate import into nucleus;0.00841886170813594!GO:0003713;transcription coactivator activity;0.00846741289511053!GO:0046474;glycerophospholipid biosynthetic process;0.00848958062125214!GO:0030139;endocytic vesicle;0.00855394489781579!GO:0051129;negative regulation of cellular component organization and biogenesis;0.0086073532834713!GO:0007005;mitochondrion organization and biogenesis;0.0086073532834713!GO:0006612;protein targeting to membrane;0.00965302747128243!GO:0016787;hydrolase activity;0.0097068737976674!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.0100639057148799!GO:0030258;lipid modification;0.0101038255174356!GO:0004298;threonine endopeptidase activity;0.0101428535505018!GO:0008186;RNA-dependent ATPase activity;0.0102934157458305!GO:0007034;vacuolar transport;0.0105321129680191!GO:0019902;phosphatase binding;0.0109981725105553!GO:0005885;Arp2/3 protein complex;0.0111183470779179!GO:0005788;endoplasmic reticulum lumen;0.01117548803623!GO:0016859;cis-trans isomerase activity;0.0112933042533251!GO:0006401;RNA catabolic process;0.0112933042533251!GO:0006672;ceramide metabolic process;0.0112973166555564!GO:0022402;cell cycle process;0.0113830206340183!GO:0031109;microtubule polymerization or depolymerization;0.0113879221933621!GO:0046519;sphingoid metabolic process;0.011725556712567!GO:0006810;transport;0.0117864252370765!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0118561001899292!GO:0001558;regulation of cell growth;0.0118561001899292!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.01193205233519!GO:0005869;dynactin complex;0.0121587521267636!GO:0015629;actin cytoskeleton;0.012298929764435!GO:0005048;signal sequence binding;0.012327107447812!GO:0019717;synaptosome;0.0125454388103797!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.0125454388103797!GO:0016050;vesicle organization and biogenesis;0.0129905459044235!GO:0019843;rRNA binding;0.0131214699392518!GO:0032940;secretion by cell;0.0134081313228623!GO:0005856;cytoskeleton;0.0134081313228623!GO:0006399;tRNA metabolic process;0.0141528933711707!GO:0051540;metal cluster binding;0.0142305952527466!GO:0051536;iron-sulfur cluster binding;0.0142305952527466!GO:0003899;DNA-directed RNA polymerase activity;0.0142703948607128!GO:0006892;post-Golgi vesicle-mediated transport;0.0145222442650294!GO:0006091;generation of precursor metabolites and energy;0.0145247817930479!GO:0015682;ferric iron transport;0.0148575406493959!GO:0015091;ferric iron transmembrane transporter activity;0.0148575406493959!GO:0031643;positive regulation of myelination;0.0148575406493959!GO:0051539;4 iron, 4 sulfur cluster binding;0.015002127929523!GO:0000118;histone deacetylase complex;0.015002127929523!GO:0030658;transport vesicle membrane;0.0150593334100865!GO:0043021;ribonucleoprotein binding;0.015094354796054!GO:0005801;cis-Golgi network;0.0156399303718326!GO:0046839;phospholipid dephosphorylation;0.0159053362316227!GO:0007266;Rho protein signal transduction;0.0159234790318012!GO:0009165;nucleotide biosynthetic process;0.0159309940983333!GO:0005868;cytoplasmic dynein complex;0.0160810960209066!GO:0030384;phosphoinositide metabolic process;0.0166775963160771!GO:0004113;2',3'-cyclic-nucleotide 3'-phosphodiesterase activity;0.0175702333531291!GO:0009214;cyclic nucleotide catabolic process;0.0175702333531291!GO:0009108;coenzyme biosynthetic process;0.0175702333531291!GO:0001578;microtubule bundle formation;0.0178719348999297!GO:0019222;regulation of metabolic process;0.018082290933631!GO:0033673;negative regulation of kinase activity;0.0185487662102498!GO:0006469;negative regulation of protein kinase activity;0.0185487662102498!GO:0051789;response to protein stimulus;0.0190115136455144!GO:0006986;response to unfolded protein;0.0190115136455144!GO:0006383;transcription from RNA polymerase III promoter;0.0192798083085818!GO:0003711;transcription elongation regulator activity;0.0195110591220465!GO:0004674;protein serine/threonine kinase activity;0.0198240611173911!GO:0006364;rRNA processing;0.0205045004026671!GO:0048468;cell development;0.0208360713376985!GO:0006338;chromatin remodeling;0.0216086624076003!GO:0005085;guanyl-nucleotide exchange factor activity;0.0217869342158683!GO:0009081;branched chain family amino acid metabolic process;0.0218184765344934!GO:0007050;cell cycle arrest;0.0220221511857087!GO:0042578;phosphoric ester hydrolase activity;0.0223613212544468!GO:0016301;kinase activity;0.0224983596118897!GO:0006644;phospholipid metabolic process;0.0226669468535402!GO:0051348;negative regulation of transferase activity;0.022671349783135!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.022930116135182!GO:0033043;regulation of organelle organization and biogenesis;0.022930116135182!GO:0030660;Golgi-associated vesicle membrane;0.0231552654181075!GO:0016579;protein deubiquitination;0.0232759548229755!GO:0005774;vacuolar membrane;0.0236186731774965!GO:0044448;cell cortex part;0.0237338999179346!GO:0046489;phosphoinositide biosynthetic process;0.0239628220411965!GO:0006752;group transfer coenzyme metabolic process;0.0239633552818453!GO:0007041;lysosomal transport;0.0239633552818453!GO:0005762;mitochondrial large ribosomal subunit;0.0240580114176601!GO:0000315;organellar large ribosomal subunit;0.0240580114176601!GO:0043681;protein import into mitochondrion;0.024215076622152!GO:0017166;vinculin binding;0.0242300275694105!GO:0004004;ATP-dependent RNA helicase activity;0.0242729481334313!GO:0051920;peroxiredoxin activity;0.0242729481334313!GO:0033116;ER-Golgi intermediate compartment membrane;0.0243025471832567!GO:0016363;nuclear matrix;0.0251655133172361!GO:0030137;COPI-coated vesicle;0.0257969532432934!GO:0004576;oligosaccharyl transferase activity;0.0267000449874112!GO:0051261;protein depolymerization;0.0267263293749489!GO:0006260;DNA replication;0.0269503157794122!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0270125585690291!GO:0016126;sterol biosynthetic process;0.0270539084400182!GO:0006281;DNA repair;0.027211757174461!GO:0001508;regulation of action potential;0.0274223939041637!GO:0016790;thiolester hydrolase activity;0.0275409428915527!GO:0006509;membrane protein ectodomain proteolysis;0.0277224295646001!GO:0033619;membrane protein proteolysis;0.0277224295646001!GO:0006665;sphingolipid metabolic process;0.0278830500574323!GO:0030320;cellular monovalent inorganic anion homeostasis;0.0283018043845276!GO:0055083;monovalent inorganic anion homeostasis;0.0283018043845276!GO:0055064;chloride ion homeostasis;0.0283018043845276!GO:0030644;cellular chloride ion homeostasis;0.0283018043845276!GO:0012506;vesicle membrane;0.0283018043845276!GO:0019911;structural constituent of myelin sheath;0.0286572247658725!GO:0030742;GTP-dependent protein binding;0.0287865818896235!GO:0048500;signal recognition particle;0.0290261778039534!GO:0008250;oligosaccharyl transferase complex;0.0299057361479485!GO:0015980;energy derivation by oxidation of organic compounds;0.0302856466125038!GO:0030663;COPI coated vesicle membrane;0.0305833908352116!GO:0030126;COPI vesicle coat;0.0305833908352116!GO:0050435;beta-amyloid metabolic process;0.0308665945277781!GO:0000287;magnesium ion binding;0.0310789323085431!GO:0016779;nucleotidyltransferase activity;0.0311693516192876!GO:0022406;membrane docking;0.0311693516192876!GO:0048278;vesicle docking;0.0311693516192876!GO:0007030;Golgi organization and biogenesis;0.0314764892759052!GO:0030119;AP-type membrane coat adaptor complex;0.0324727291711186!GO:0007004;telomere maintenance via telomerase;0.0327090979435381!GO:0031124;mRNA 3'-end processing;0.0327090979435381!GO:0051252;regulation of RNA metabolic process;0.0328131581709976!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0337946885678088!GO:0016072;rRNA metabolic process;0.0342130379654913!GO:0008022;protein C-terminus binding;0.0346385407894344!GO:0030135;coated vesicle;0.0346385407894344!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0349411039753661!GO:0010257;NADH dehydrogenase complex assembly;0.0349411039753661!GO:0033108;mitochondrial respiratory chain complex assembly;0.0349411039753661!GO:0007006;mitochondrial membrane organization and biogenesis;0.0349411039753661!GO:0065004;protein-DNA complex assembly;0.0350811659823351!GO:0007243;protein kinase cascade;0.0355754286955089!GO:0004860;protein kinase inhibitor activity;0.0360848586571886!GO:0006595;polyamine metabolic process;0.0360848586571886!GO:0030131;clathrin adaptor complex;0.0360848586571886!GO:0040008;regulation of growth;0.0360848586571886!GO:0009083;branched chain family amino acid catabolic process;0.0361778793462658!GO:0006414;translational elongation;0.0367304482028303!GO:0050178;phenylpyruvate tautomerase activity;0.0369588439334109!GO:0043284;biopolymer biosynthetic process;0.0373622812192717!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0373622812192717!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0373622812192717!GO:0007017;microtubule-based process;0.0375072729070307!GO:0005637;nuclear inner membrane;0.0375958196604226!GO:0051179;localization;0.0377462393557525!GO:0006979;response to oxidative stress;0.0377705711471604!GO:0042158;lipoprotein biosynthetic process;0.0377953005416654!GO:0016491;oxidoreductase activity;0.0381510322293305!GO:0019904;protein domain specific binding;0.0382795599443816!GO:0042981;regulation of apoptosis;0.0382795599443816!GO:0032318;regulation of Ras GTPase activity;0.0385468136090615!GO:0008429;phosphatidylethanolamine binding;0.0388452965533887!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0392177268452243!GO:0035035;histone acetyltransferase binding;0.0394133310158483!GO:0031110;regulation of microtubule polymerization or depolymerization;0.0398684314481615!GO:0032956;regulation of actin cytoskeleton organization and biogenesis;0.0399674041844109!GO:0048154;S100 beta binding;0.040385826040598!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.040385826040598!GO:0009719;response to endogenous stimulus;0.040430262428967!GO:0006779;porphyrin biosynthetic process;0.0405307789131427!GO:0033014;tetrapyrrole biosynthetic process;0.0405307789131427!GO:0001887;selenium metabolic process;0.040619164672338!GO:0043067;regulation of programmed cell death;0.0406374927455347!GO:0006778;porphyrin metabolic process;0.0411697742395647!GO:0033013;tetrapyrrole metabolic process;0.0411697742395647!GO:0030176;integral to endoplasmic reticulum membrane;0.0414227391920406!GO:0000209;protein polyubiquitination;0.0414227391920406!GO:0030911;TPR domain binding;0.0414227391920406!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0421881778421045!GO:0045446;endothelial cell differentiation;0.0437270518021025!GO:0044433;cytoplasmic vesicle part;0.0443185817187819!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0448923751904286!GO:0045047;protein targeting to ER;0.0448923751904286!GO:0005765;lysosomal membrane;0.0453567820671958!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0453567820671958!GO:0015002;heme-copper terminal oxidase activity;0.0453567820671958!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0453567820671958!GO:0004129;cytochrome-c oxidase activity;0.0453567820671958!GO:0051427;hormone receptor binding;0.0468997899077091!GO:0030659;cytoplasmic vesicle membrane;0.0470669971683397!GO:0051287;NAD binding;0.0472059810222357!GO:0043254;regulation of protein complex assembly;0.047779462787188!GO:0043488;regulation of mRNA stability;0.047779462787188!GO:0043487;regulation of RNA stability;0.047779462787188!GO:0006904;vesicle docking during exocytosis;0.0479181365405948!GO:0006497;protein amino acid lipidation;0.0483094498947444!GO:0021782;glial cell development;0.048507773331012!GO:0016581;NuRD complex;0.048507773331012 | |||
|sample_id=10277 | |sample_id=10277 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 100: | ||
|sample_tissue=optic nerve | |sample_tissue=optic nerve | ||
|top_motifs=SOX5:4.13144263399;XBP1:3.39925162705;FOXP1:3.35703831675;SOX2:3.21708074801;SOX{8,9,10}:2.78492918536;SOX17:2.6415170472;NHLH1,2:2.52816275447;ALX1:2.52325823014;ZFP161:2.33053831227;MED-1{core}:2.29442742394;HIC1:2.20438552043;POU6F1:2.10179868527;NFIX:2.02410277264;MTE{core}:1.90636895714;ATF2:1.86057087796;REST:1.85529823367;EP300:1.84996969601;NKX3-2:1.8188092907;RBPJ:1.75503568712;CUX2:1.75154924392;NANOG:1.71459697365;GATA4:1.57321761671;TFAP2B:1.54045186022;FOXO1,3,4:1.52666501648;PITX1..3:1.52411098805;DBP:1.52383188092;TFAP2{A,C}:1.51569693826;FOX{F1,F2,J1}:1.51042985211;MYFfamily:1.4426149886;BREu{core}:1.440189532;AR:1.43106566501;LMO2:1.42197589907;ZBTB6:1.39902290763;ZNF423:1.37445858437;PAX6:1.3743219776;FOX{D1,D2}:1.36415865776;ZNF384:1.36033041134;HOX{A6,A7,B6,B7}:1.35822194089;JUN:1.3566118354;HOXA9_MEIS1:1.27532052978;PRRX1,2:1.25551791303;SMAD1..7,9:1.24691891658;GTF2I:1.20361817032;NR3C1:1.16587724334;TGIF1:1.1411682337;FOXP3:1.11673050414;HBP1_HMGB_SSRP1_UBTF:1.07142245432;CRX:1.06811120577;MTF1:1.04380395086;SPZ1:1.01756691919;FOXQ1:0.992985386611;MZF1:0.963811068726;MAZ:0.907589284293;LEF1_TCF7_TCF7L1,2:0.874060702781;PATZ1:0.80758664775;BPTF:0.804487314832;MYBL2:0.792269905084;RREB1:0.7497198474;EBF1:0.707960533031;SREBF1,2:0.667536667715;OCT4_SOX2{dimer}:0.65349348434;PAX5:0.626871738594;EGR1..3:0.558927456405;RFX2..5_RFXANK_RFXAP:0.546408719122;MAFB:0.54613892089;GFI1B:0.539468031921;NKX6-1,2:0.53020697864;CREB1:0.520610967834;POU3F1..4:0.517246876791;NKX2-2,8:0.50542659189;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.446678001111;ZBTB16:0.439669924314;RFX1:0.420595462329;TFDP1:0.415702008118;STAT2,4,6:0.310532020872;FOXM1:0.303121645915;NRF1:0.282971882932;ZNF143:0.251312694523;KLF4:0.20955530633;ZIC1..3:0.194281809409;IKZF2:0.18208908923;STAT5{A,B}:0.151473463178;FOXD3:0.148419179436;PAX4:0.139737022263;TLX1..3_NFIC{dimer}:0.131947243611;IRF7:0.106417803942;SP1:0.0869042488164;GZF1:0.0859636867878;RORA:0.0824054713477;TOPORS:0.0779700978945;LHX3,4:0.0773212422058;TBX4,5:0.0757616062024;ZNF238:0.074094665239;ARID5B:0.0685940459879;GCM1,2:0.0425087883358;PRDM1:0.0327407614336;ADNP_IRX_SIX_ZHX:0.00168516431372;HMGA1,2:-0.00945314607689;YY1:-0.033249502505;CDC5L:-0.0394822359827;TFAP4:-0.0399626835382;GTF2A1,2:-0.0426177082178;NR5A1,2:-0.061925513117;HOX{A4,D4}:-0.0800508550272;NKX2-3_NKX2-5:-0.0828609221395;HMX1:-0.121943380433;STAT1,3:-0.128010770578;AHR_ARNT_ARNT2:-0.138141045895;ESRRA:-0.142926275917;FOX{I1,J2}:-0.149100938212;NFIL3:-0.181397184074;RXR{A,B,G}:-0.186084632812;ATF5_CREB3:-0.206661211277;HNF4A_NR2F1,2:-0.236571741397;GATA6:-0.253913083001;NFATC1..3:-0.276810904882;ONECUT1,2:-0.283993233898;TAL1_TCF{3,4,12}:-0.289238696921;PDX1:-0.319099538959;MEF2{A,B,C,D}:-0.338578004674;IRF1,2:-0.346201966395;EVI1:-0.367875033125;HNF1A:-0.395681760686;TFCP2:-0.412028987462;NANOG{mouse}:-0.414998493189;PAX2:-0.452504785688;ZEB1:-0.454813131542;FOXN1:-0.458216680255;PBX1:-0.475746271344;POU5F1:-0.476011909354;HES1:-0.496074394093;IKZF1:-0.506038981138;NKX2-1,4:-0.531847975302;TBP:-0.546145727548;HAND1,2:-0.569039626141;ATF6:-0.569251640316;PAX1,9:-0.574765179058;NFY{A,B,C}:-0.581076803123;NFE2:-0.58440995363;TEAD1:-0.595352073255;ETS1,2:-0.601116706478;CEBPA,B_DDIT3:-0.617312129607;ESR1:-0.621120155099;SRF:-0.658628663542;SPIB:-0.659537719023;XCPE1{core}:-0.660445687648;FOXL1:-0.674840321043;FOSL2:-0.698825098819;TP53:-0.715323056028;NFE2L2:-0.726317582625;FOXA2:-0.730473532194;FOS_FOS{B,L1}_JUN{B,D}:-0.734471318966;HLF:-0.740040932693;NKX3-1:-0.746799839008;ALX4:-0.749303522578;T:-0.755771108223;BACH2:-0.770026302836;CDX1,2,4:-0.779909908293;UFEwm:-0.789249832297;ATF4:-0.790487745377;TEF:-0.795582547086;MYOD1:-0.811292641523;NFE2L1:-0.841191367557;TLX2:-0.876073330309;SPI1:-0.953334248793;RUNX1..3:-0.959683188528;POU1F1:-0.962701789915;POU2F1..3:-0.96644561159;GFI1:-0.97499100086;NFKB1_REL_RELA:-0.992158926087;SNAI1..3:-1.01330586878;HIF1A:-1.02192816242;DMAP1_NCOR{1,2}_SMARC:-1.05946828159;ELF1,2,4:-1.09418563647;PAX8:-1.09648107318;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.10331155255;AIRE:-1.14323762651;MYB:-1.18928851903;E2F1..5:-1.20703829632;VSX1,2:-1.23028327382;NR6A1:-1.33321544889;ELK1,4_GABP{A,B1}:-1.35680960174;bHLH_family:-1.44710578243;GLI1..3:-1.50337522868;PAX3,7:-1.56858768556;ZNF148:-1.60962899358;NR1H4:-1.70579982267;RXRA_VDR{dimer}:-1.76205880984;HSF1,2:-1.9966143511;EN1,2:-2.07372290766;HOX{A5,B5}:-2.09022899375;PPARG:-2.91062579172 | |top_motifs=SOX5:4.13144263399;XBP1:3.39925162705;FOXP1:3.35703831675;SOX2:3.21708074801;SOX{8,9,10}:2.78492918536;SOX17:2.6415170472;NHLH1,2:2.52816275447;ALX1:2.52325823014;ZFP161:2.33053831227;MED-1{core}:2.29442742394;HIC1:2.20438552043;POU6F1:2.10179868527;NFIX:2.02410277264;MTE{core}:1.90636895714;ATF2:1.86057087796;REST:1.85529823367;EP300:1.84996969601;NKX3-2:1.8188092907;RBPJ:1.75503568712;CUX2:1.75154924392;NANOG:1.71459697365;GATA4:1.57321761671;TFAP2B:1.54045186022;FOXO1,3,4:1.52666501648;PITX1..3:1.52411098805;DBP:1.52383188092;TFAP2{A,C}:1.51569693826;FOX{F1,F2,J1}:1.51042985211;MYFfamily:1.4426149886;BREu{core}:1.440189532;AR:1.43106566501;LMO2:1.42197589907;ZBTB6:1.39902290763;ZNF423:1.37445858437;PAX6:1.3743219776;FOX{D1,D2}:1.36415865776;ZNF384:1.36033041134;HOX{A6,A7,B6,B7}:1.35822194089;JUN:1.3566118354;HOXA9_MEIS1:1.27532052978;PRRX1,2:1.25551791303;SMAD1..7,9:1.24691891658;GTF2I:1.20361817032;NR3C1:1.16587724334;TGIF1:1.1411682337;FOXP3:1.11673050414;HBP1_HMGB_SSRP1_UBTF:1.07142245432;CRX:1.06811120577;MTF1:1.04380395086;SPZ1:1.01756691919;FOXQ1:0.992985386611;MZF1:0.963811068726;MAZ:0.907589284293;LEF1_TCF7_TCF7L1,2:0.874060702781;PATZ1:0.80758664775;BPTF:0.804487314832;MYBL2:0.792269905084;RREB1:0.7497198474;EBF1:0.707960533031;SREBF1,2:0.667536667715;OCT4_SOX2{dimer}:0.65349348434;PAX5:0.626871738594;EGR1..3:0.558927456405;RFX2..5_RFXANK_RFXAP:0.546408719122;MAFB:0.54613892089;GFI1B:0.539468031921;NKX6-1,2:0.53020697864;CREB1:0.520610967834;POU3F1..4:0.517246876791;NKX2-2,8:0.50542659189;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.446678001111;ZBTB16:0.439669924314;RFX1:0.420595462329;TFDP1:0.415702008118;STAT2,4,6:0.310532020872;FOXM1:0.303121645915;NRF1:0.282971882932;ZNF143:0.251312694523;KLF4:0.20955530633;ZIC1..3:0.194281809409;IKZF2:0.18208908923;STAT5{A,B}:0.151473463178;FOXD3:0.148419179436;PAX4:0.139737022263;TLX1..3_NFIC{dimer}:0.131947243611;IRF7:0.106417803942;SP1:0.0869042488164;GZF1:0.0859636867878;RORA:0.0824054713477;TOPORS:0.0779700978945;LHX3,4:0.0773212422058;TBX4,5:0.0757616062024;ZNF238:0.074094665239;ARID5B:0.0685940459879;GCM1,2:0.0425087883358;PRDM1:0.0327407614336;ADNP_IRX_SIX_ZHX:0.00168516431372;HMGA1,2:-0.00945314607689;YY1:-0.033249502505;CDC5L:-0.0394822359827;TFAP4:-0.0399626835382;GTF2A1,2:-0.0426177082178;NR5A1,2:-0.061925513117;HOX{A4,D4}:-0.0800508550272;NKX2-3_NKX2-5:-0.0828609221395;HMX1:-0.121943380433;STAT1,3:-0.128010770578;AHR_ARNT_ARNT2:-0.138141045895;ESRRA:-0.142926275917;FOX{I1,J2}:-0.149100938212;NFIL3:-0.181397184074;RXR{A,B,G}:-0.186084632812;ATF5_CREB3:-0.206661211277;HNF4A_NR2F1,2:-0.236571741397;GATA6:-0.253913083001;NFATC1..3:-0.276810904882;ONECUT1,2:-0.283993233898;TAL1_TCF{3,4,12}:-0.289238696921;PDX1:-0.319099538959;MEF2{A,B,C,D}:-0.338578004674;IRF1,2:-0.346201966395;EVI1:-0.367875033125;HNF1A:-0.395681760686;TFCP2:-0.412028987462;NANOG{mouse}:-0.414998493189;PAX2:-0.452504785688;ZEB1:-0.454813131542;FOXN1:-0.458216680255;PBX1:-0.475746271344;POU5F1:-0.476011909354;HES1:-0.496074394093;IKZF1:-0.506038981138;NKX2-1,4:-0.531847975302;TBP:-0.546145727548;HAND1,2:-0.569039626141;ATF6:-0.569251640316;PAX1,9:-0.574765179058;NFY{A,B,C}:-0.581076803123;NFE2:-0.58440995363;TEAD1:-0.595352073255;ETS1,2:-0.601116706478;CEBPA,B_DDIT3:-0.617312129607;ESR1:-0.621120155099;SRF:-0.658628663542;SPIB:-0.659537719023;XCPE1{core}:-0.660445687648;FOXL1:-0.674840321043;FOSL2:-0.698825098819;TP53:-0.715323056028;NFE2L2:-0.726317582625;FOXA2:-0.730473532194;FOS_FOS{B,L1}_JUN{B,D}:-0.734471318966;HLF:-0.740040932693;NKX3-1:-0.746799839008;ALX4:-0.749303522578;T:-0.755771108223;BACH2:-0.770026302836;CDX1,2,4:-0.779909908293;UFEwm:-0.789249832297;ATF4:-0.790487745377;TEF:-0.795582547086;MYOD1:-0.811292641523;NFE2L1:-0.841191367557;TLX2:-0.876073330309;SPI1:-0.953334248793;RUNX1..3:-0.959683188528;POU1F1:-0.962701789915;POU2F1..3:-0.96644561159;GFI1:-0.97499100086;NFKB1_REL_RELA:-0.992158926087;SNAI1..3:-1.01330586878;HIF1A:-1.02192816242;DMAP1_NCOR{1,2}_SMARC:-1.05946828159;ELF1,2,4:-1.09418563647;PAX8:-1.09648107318;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.10331155255;AIRE:-1.14323762651;MYB:-1.18928851903;E2F1..5:-1.20703829632;VSX1,2:-1.23028327382;NR6A1:-1.33321544889;ELK1,4_GABP{A,B1}:-1.35680960174;bHLH_family:-1.44710578243;GLI1..3:-1.50337522868;PAX3,7:-1.56858768556;ZNF148:-1.60962899358;NR1H4:-1.70579982267;RXRA_VDR{dimer}:-1.76205880984;HSF1,2:-1.9966143511;EN1,2:-2.07372290766;HOX{A5,B5}:-2.09022899375;PPARG:-2.91062579172 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10277-104E7;search_select_hide=table117:FF:10277-104E7 | |||
}} | }} | ||
Latest revision as of 13:57, 3 June 2020
| Name: | optic nerve, donor1 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs13449 |
| Sample type: | tissues |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13449
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13449
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.308 |
| 10 | 10 | 0.134 |
| 100 | 100 | 0.788 |
| 101 | 101 | 0.634 |
| 102 | 102 | 0.651 |
| 103 | 103 | 0.0219 |
| 104 | 104 | 0.0227 |
| 105 | 105 | 0.0587 |
| 106 | 106 | 0.108 |
| 107 | 107 | 0.513 |
| 108 | 108 | 0.574 |
| 109 | 109 | 0.00263 |
| 11 | 11 | 0.0122 |
| 110 | 110 | 0.0553 |
| 111 | 111 | 0.695 |
| 112 | 112 | 0.44 |
| 113 | 113 | 0.0204 |
| 114 | 114 | 0.49 |
| 115 | 115 | 0.419 |
| 116 | 116 | 0.235 |
| 117 | 117 | 0.0146 |
| 118 | 118 | 0.369 |
| 119 | 119 | 0.845 |
| 12 | 12 | 0.374 |
| 120 | 120 | 0.0328 |
| 121 | 121 | 0.848 |
| 122 | 122 | 0.907 |
| 123 | 123 | 0.00103 |
| 124 | 124 | 0.536 |
| 125 | 125 | 0.913 |
| 126 | 126 | 0.145 |
| 127 | 127 | 0.195 |
| 128 | 128 | 0.698 |
| 129 | 129 | 0.942 |
| 13 | 13 | 0.00522 |
| 130 | 130 | 0.0568 |
| 131 | 131 | 0.0035 |
| 132 | 132 | 0.437 |
| 133 | 133 | 0.114 |
| 134 | 134 | 0.444 |
| 135 | 135 | 0.879 |
| 136 | 136 | 0.0031 |
| 137 | 137 | 0.294 |
| 138 | 138 | 0.463 |
| 139 | 139 | 0.73 |
| 14 | 14 | 0.93 |
| 140 | 140 | 0.179 |
| 141 | 141 | 0.881 |
| 142 | 142 | 0.497 |
| 143 | 143 | 0.0808 |
| 144 | 144 | 0.305 |
| 145 | 145 | 0.792 |
| 146 | 146 | 0.926 |
| 147 | 147 | 0.985 |
| 148 | 148 | 0.882 |
| 149 | 149 | 0.177 |
| 15 | 15 | 0.102 |
| 150 | 150 | 0.0808 |
| 151 | 151 | 0.942 |
| 152 | 152 | 0.0906 |
| 153 | 153 | 0.297 |
| 154 | 154 | 0.141 |
| 155 | 155 | 0.771 |
| 156 | 156 | 0.493 |
| 157 | 157 | 0.434 |
| 158 | 158 | 0.351 |
| 159 | 159 | 0.0765 |
| 16 | 16 | 0.0549 |
| 160 | 160 | 0.347 |
| 161 | 161 | 0.329 |
| 162 | 162 | 0.526 |
| 163 | 163 | 0.798 |
| 164 | 164 | 0.015 |
| 165 | 165 | 0.0999 |
| 166 | 166 | 0.821 |
| 167 | 167 | 0.229 |
| 168 | 168 | 0.67 |
| 169 | 169 | 0.109 |
| 17 | 17 | 0.178 |
| 18 | 18 | 0.113 |
| 19 | 19 | 0.445 |
| 2 | 2 | 0.737 |
| 20 | 20 | 0.185 |
| 21 | 21 | 0.161 |
| 22 | 22 | 0.237 |
| 23 | 23 | 0.793 |
| 24 | 24 | 0.0022 |
| 25 | 25 | 0.467 |
| 26 | 26 | 0.143 |
| 27 | 27 | 0.297 |
| 28 | 28 | 0.936 |
| 29 | 29 | 5.1869e-4 |
| 3 | 3 | 0.0842 |
| 30 | 30 | 0.597 |
| 31 | 31 | 0.766 |
| 32 | 32 | 0.0243 |
| 33 | 33 | 0.15 |
| 34 | 34 | 0.667 |
| 35 | 35 | 0.749 |
| 36 | 36 | 0.583 |
| 37 | 37 | 0.0315 |
| 38 | 38 | 0.615 |
| 39 | 39 | 0.465 |
| 4 | 4 | 0.635 |
| 40 | 40 | 0.196 |
| 41 | 41 | 0.605 |
| 42 | 42 | 0.421 |
| 43 | 43 | 0.287 |
| 44 | 44 | 0.00703 |
| 45 | 45 | 0.824 |
| 46 | 46 | 0.085 |
| 47 | 47 | 0.0787 |
| 48 | 48 | 0.055 |
| 49 | 49 | 0.49 |
| 5 | 5 | 0.455 |
| 50 | 50 | 0.629 |
| 51 | 51 | 0.607 |
| 52 | 52 | 0.976 |
| 53 | 53 | 0.14 |
| 54 | 54 | 0.908 |
| 55 | 55 | 0.831 |
| 56 | 56 | 0.936 |
| 57 | 57 | 0.815 |
| 58 | 58 | 0.286 |
| 59 | 59 | 0.0326 |
| 6 | 6 | 0.55 |
| 60 | 60 | 0.203 |
| 61 | 61 | 0.13 |
| 62 | 62 | 0.135 |
| 63 | 63 | 0.96 |
| 64 | 64 | 0.178 |
| 65 | 65 | 0.381 |
| 66 | 66 | 0.0837 |
| 67 | 67 | 0.676 |
| 68 | 68 | 0.206 |
| 69 | 69 | 0.435 |
| 7 | 7 | 0.135 |
| 70 | 70 | 0.713 |
| 71 | 71 | 0.00806 |
| 72 | 72 | 0.0678 |
| 73 | 73 | 0.0226 |
| 74 | 74 | 0.79 |
| 75 | 75 | 0.0104 |
| 76 | 76 | 0.685 |
| 77 | 77 | 0.1 |
| 78 | 78 | 0.0165 |
| 79 | 79 | 0.15 |
| 8 | 8 | 0.104 |
| 80 | 80 | 0.324 |
| 81 | 81 | 0.532 |
| 82 | 82 | 0.96 |
| 83 | 83 | 0.0247 |
| 84 | 84 | 0.49 |
| 85 | 85 | 0.351 |
| 86 | 86 | 0.21 |
| 87 | 87 | 0.00108 |
| 88 | 88 | 0.578 |
| 89 | 89 | 0.128 |
| 9 | 9 | 0.252 |
| 90 | 90 | 0.626 |
| 91 | 91 | 0.363 |
| 92 | 92 | 0.668 |
| 93 | 93 | 0.569 |
| 94 | 94 | 0.466 |
| 95 | 95 | 0.00285 |
| 96 | 96 | 0.274 |
| 97 | 97 | 0.88 |
| 98 | 98 | 0.426 |
| 99 | 99 | 0.761 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs13449
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0011166 human optic nerve sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0000941 (cranial nerve II)
0003714 (neural tissue)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0011216 (organ system subdivision)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000063 (organ segment)
0005162 (multi cell component structure)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0001785 (cranial nerve)
0002464 (nerve trunk)
0004904 (nerve connecting eye with brain)
0000122 (neuron projection bundle)
0001021 (nerve)
0004732 (segmental subdivision of nervous system)
0001032 (sensory system)
0010317 (germ layer / neural crest derived structure)
0000010 (peripheral nervous system)
0001016 (nervous system)
0002104 (visual system)
0004456 (entire sense organ system)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0011166 (human optic nerve sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0003056 (pre-chordal neural plate)
UBERON:0005425 (presumptive neural retina)
UBERON:0010316 (germ layer / neural crest)
