FF:10096-102C6: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00005187 | ||
|accession_numbers=CAGE;DRX008740;DRR009612;DRZ001037;DRZ002422;DRZ012387;DRZ013772 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000473,UBERON:0000991,UBERON:0000479,UBERON:0005156,UBERON:0000466,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000990,UBERON:0002553,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003135,UBERON:0003133,UBERON:0002323,UBERON:0000464,UBERON:0004458,UBERON:0010317,UBERON:0003101,UBERON:0000079 | |||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0010026 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/testis%252c%2520adult%252c%2520pool2.CNhs12998.10096-102C6.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/testis%252c%2520adult%252c%2520pool2.CNhs12998.10096-102C6.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/testis%252c%2520adult%252c%2520pool2.CNhs12998.10096-102C6.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/testis%252c%2520adult%252c%2520pool2.CNhs12998.10096-102C6.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/testis%252c%2520adult%252c%2520pool2.CNhs12998.10096-102C6.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10096-102C6 | |id=FF:10096-102C6 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0010026 | ||
|is_obsolete= | |||
|library_id=CNhs12998 | |||
|library_id_phase_based=2:CNhs12998 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10096 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10096 | |||
|name=testis, adult, pool2 | |name=testis, adult, pool2 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12998,LSID999,release012,COMPLETED | |profile_hcage=CNhs12998,LSID999,release012,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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|rna_box=102 | |rna_box=102 | ||
|rna_catalog_number=Cat: 636643 Lot: 8101369A-16 | |rna_catalog_number=Cat: 636643 Lot: 8101369A-16 | ||
| Line 57: | Line 79: | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|sample_age= | |sample_age= | ||
|sample_category=tissues | |||
|sample_cell_catalog=NA | |sample_cell_catalog=NA | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 92: | ||
|sample_ethnicity=C | |sample_ethnicity=C | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;4.30846832598788e-221!GO:0043226;organelle;6.34707323549716e-185!GO:0043229;intracellular organelle;1.09905927354508e-184!GO:0043231;intracellular membrane-bound organelle;2.28659131056628e-176!GO:0043227;membrane-bound organelle;2.7435623835639e-176!GO:0005737;cytoplasm;2.52849328636658e-144!GO:0044422;organelle part;1.05371187835618e-123!GO:0044446;intracellular organelle part;1.53939585749375e-122!GO:0005634;nucleus;7.48263199381338e-89!GO:0044444;cytoplasmic part;1.15938774734031e-87!GO:0032991;macromolecular complex;5.87008869600028e-83!GO:0044238;primary metabolic process;6.85968154438637e-78!GO:0043170;macromolecule metabolic process;2.93446961052623e-77!GO:0044237;cellular metabolic process;4.51486414971627e-76!GO:0044428;nuclear part;1.61301969242077e-73!GO:0003723;RNA binding;1.21528497062987e-68!GO:0030529;ribonucleoprotein complex;1.00903064648937e-57!GO:0043233;organelle lumen;3.39397539151313e-57!GO:0031974;membrane-enclosed lumen;3.39397539151313e-57!GO:0016043;cellular component organization and biogenesis;7.42689191749822e-53!GO:0005515;protein binding;8.15748496605204e-50!GO:0043283;biopolymer metabolic process;7.13425417037426e-47!GO:0019538;protein metabolic process;3.24738943420713e-46!GO:0043234;protein complex;1.155678191196e-45!GO:0005739;mitochondrion;4.23115135472051e-44!GO:0044267;cellular protein metabolic process;4.5913972786915e-41!GO:0031981;nuclear lumen;4.99155786291098e-41!GO:0006996;organelle organization and biogenesis;9.59038718375619e-41!GO:0044260;cellular macromolecule metabolic process;1.22634079383305e-40!GO:0043228;non-membrane-bound organelle;1.40662629544332e-39!GO:0043232;intracellular non-membrane-bound organelle;1.40662629544332e-39!GO:0033036;macromolecule localization;8.25233028147699e-39!GO:0031967;organelle envelope;6.78191173643432e-38!GO:0031975;envelope;1.18470780397466e-37!GO:0016071;mRNA metabolic process;2.129377197951e-36!GO:0015031;protein transport;5.98980613180295e-36!GO:0006396;RNA processing;6.86508501343194e-36!GO:0046907;intracellular transport;3.40845366695957e-35!GO:0031090;organelle membrane;1.02589078918455e-33!GO:0008104;protein localization;1.05729836709866e-33!GO:0065003;macromolecular complex assembly;3.2881049073187e-33!GO:0022607;cellular component assembly;9.66957686670519e-33!GO:0045184;establishment of protein localization;1.18204267034149e-32!GO:0044429;mitochondrial part;1.18204267034149e-32!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.91596994644024e-31!GO:0006259;DNA metabolic process;3.74048064174909e-31!GO:0008380;RNA splicing;1.31827434898611e-30!GO:0005840;ribosome;4.2029195752588e-30!GO:0010467;gene expression;2.23010579037719e-29!GO:0006397;mRNA processing;4.65118076329624e-29!GO:0007049;cell cycle;3.96667899147183e-28!GO:0006412;translation;4.68008148668326e-28!GO:0005654;nucleoplasm;3.55477897402056e-27!GO:0003676;nucleic acid binding;6.42782477715309e-27!GO:0005829;cytosol;6.98503561952813e-26!GO:0003735;structural constituent of ribosome;1.34760365284219e-25!GO:0051649;establishment of cellular localization;1.57463495527824e-25!GO:0051641;cellular localization;2.42126529140152e-25!GO:0006886;intracellular protein transport;6.83217097024102e-25!GO:0033279;ribosomal subunit;2.46878953125877e-24!GO:0000166;nucleotide binding;3.90147263808339e-24!GO:0006512;ubiquitin cycle;5.23062172511673e-24!GO:0005740;mitochondrial envelope;2.10134857317073e-23!GO:0016874;ligase activity;2.3012384056071e-23!GO:0031966;mitochondrial membrane;6.1561013428325e-23!GO:0022402;cell cycle process;3.3570854036256e-22!GO:0051276;chromosome organization and biogenesis;6.85881813939389e-22!GO:0044451;nucleoplasm part;7.1208085804899e-22!GO:0015630;microtubule cytoskeleton;2.51669626339637e-21!GO:0005681;spliceosome;3.3537917967893e-21!GO:0005694;chromosome;3.04862791633915e-20!GO:0006323;DNA packaging;6.18283667984972e-20!GO:0019866;organelle inner membrane;8.39332442580657e-20!GO:0048232;male gamete generation;1.81356271241474e-19!GO:0007283;spermatogenesis;1.81356271241474e-19!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.07045092824938e-19!GO:0005830;cytosolic ribosome (sensu Eukaryota);6.12450137488802e-19!GO:0044265;cellular macromolecule catabolic process;6.62132289301469e-19!GO:0044427;chromosomal part;7.73037427378701e-19!GO:0006325;establishment and/or maintenance of chromatin architecture;8.01792282114597e-19!GO:0005743;mitochondrial inner membrane;2.07896158829925e-18!GO:0006457;protein folding;7.64497880758903e-18!GO:0043412;biopolymer modification;1.65278602808949e-17!GO:0009059;macromolecule biosynthetic process;2.04969959798322e-17!GO:0006119;oxidative phosphorylation;3.24448252417644e-17!GO:0006511;ubiquitin-dependent protein catabolic process;6.65897760591878e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;6.65897760591878e-17!GO:0019941;modification-dependent protein catabolic process;1.02887607748491e-16!GO:0043632;modification-dependent macromolecule catabolic process;1.02887607748491e-16!GO:0019953;sexual reproduction;1.40844441382998e-16!GO:0044257;cellular protein catabolic process;1.77839304878775e-16!GO:0006464;protein modification process;1.90042708785166e-16!GO:0007276;gamete generation;3.37743671485107e-16!GO:0009058;biosynthetic process;3.75007416402744e-16!GO:0043687;post-translational protein modification;4.84192632398892e-16!GO:0051082;unfolded protein binding;5.83268633143026e-16!GO:0005635;nuclear envelope;9.16557780455965e-16!GO:0031965;nuclear membrane;9.88468236149863e-16!GO:0022618;protein-RNA complex assembly;1.15151299347865e-15!GO:0008134;transcription factor binding;2.12251321482928e-15!GO:0022403;cell cycle phase;2.2277072124692e-15!GO:0044249;cellular biosynthetic process;3.89218927484509e-15!GO:0016070;RNA metabolic process;5.40614775924112e-15!GO:0032553;ribonucleotide binding;6.64623459853177e-15!GO:0032555;purine ribonucleotide binding;6.64623459853177e-15!GO:0044453;nuclear membrane part;8.14518327701293e-15!GO:0044445;cytosolic part;1.00689689785133e-14!GO:0005643;nuclear pore;1.05254901455438e-14!GO:0050657;nucleic acid transport;1.17507675101751e-14!GO:0051236;establishment of RNA localization;1.17507675101751e-14!GO:0050658;RNA transport;1.17507675101751e-14!GO:0016462;pyrophosphatase activity;1.41892370090769e-14!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.53532422542244e-14!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.67087910037289e-14!GO:0006403;RNA localization;2.03440117571482e-14!GO:0016817;hydrolase activity, acting on acid anhydrides;2.05433067250404e-14!GO:0032559;adenyl ribonucleotide binding;2.38176400234399e-14!GO:0005524;ATP binding;2.71184560535036e-14!GO:0017076;purine nucleotide binding;3.8325591660615e-14!GO:0044455;mitochondrial membrane part;4.03862979155032e-14!GO:0017111;nucleoside-triphosphatase activity;4.25006414631885e-14!GO:0015934;large ribosomal subunit;4.64989022643198e-14!GO:0000279;M phase;5.52735763185472e-14!GO:0016881;acid-amino acid ligase activity;8.68980602440292e-14!GO:0009057;macromolecule catabolic process;1.35401406586415e-13!GO:0000785;chromatin;1.4154965438455e-13!GO:0030554;adenyl nucleotide binding;2.58244026309384e-13!GO:0005730;nucleolus;2.72627587530499e-13!GO:0006913;nucleocytoplasmic transport;3.47347394744876e-13!GO:0048770;pigment granule;5.91291470553754e-13!GO:0042470;melanosome;5.91291470553754e-13!GO:0051301;cell division;6.21377036902443e-13!GO:0006605;protein targeting;7.32081932743657e-13!GO:0051028;mRNA transport;1.0192014935023e-12!GO:0051169;nuclear transport;1.12371742336706e-12!GO:0004386;helicase activity;1.47266291871774e-12!GO:0019787;small conjugating protein ligase activity;2.03694225945644e-12!GO:0016604;nuclear body;3.58578389093427e-12!GO:0000278;mitotic cell cycle;3.87782205339227e-12!GO:0006974;response to DNA damage stimulus;4.03307325274238e-12!GO:0044248;cellular catabolic process;4.24390185630169e-12!GO:0065004;protein-DNA complex assembly;4.91357255096688e-12!GO:0043285;biopolymer catabolic process;4.91357255096688e-12!GO:0005746;mitochondrial respiratory chain;4.91357255096688e-12!GO:0012505;endomembrane system;5.20504372866274e-12!GO:0050136;NADH dehydrogenase (quinone) activity;6.02020309340016e-12!GO:0003954;NADH dehydrogenase activity;6.02020309340016e-12!GO:0008137;NADH dehydrogenase (ubiquinone) activity;6.02020309340016e-12!GO:0008565;protein transporter activity;6.56705428701971e-12!GO:0006333;chromatin assembly or disassembly;8.47621398319764e-12!GO:0008639;small protein conjugating enzyme activity;9.49337022070844e-12!GO:0048193;Golgi vesicle transport;9.51744303853471e-12!GO:0008135;translation factor activity, nucleic acid binding;1.02446725740909e-11!GO:0004842;ubiquitin-protein ligase activity;1.18389874047354e-11!GO:0015935;small ribosomal subunit;2.00701702282398e-11!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;2.1592993309766e-11!GO:0031980;mitochondrial lumen;2.21773179844193e-11!GO:0005759;mitochondrial matrix;2.21773179844193e-11!GO:0000398;nuclear mRNA splicing, via spliceosome;2.85765265060531e-11!GO:0000375;RNA splicing, via transesterification reactions;2.85765265060531e-11!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.85765265060531e-11!GO:0030163;protein catabolic process;3.35809757387074e-11!GO:0016887;ATPase activity;6.00503729375735e-11!GO:0008026;ATP-dependent helicase activity;6.26070889065894e-11!GO:0016607;nuclear speck;6.28061158462723e-11!GO:0046930;pore complex;6.34455501593153e-11!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;7.45280323486528e-11!GO:0006281;DNA repair;8.3844359669455e-11!GO:0000502;proteasome complex (sensu Eukaryota);9.26183982278168e-11!GO:0016192;vesicle-mediated transport;1.8008106396092e-10!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.27996861885582e-10!GO:0005874;microtubule;2.40353497276211e-10!GO:0003712;transcription cofactor activity;2.51734048543028e-10!GO:0042623;ATPase activity, coupled;2.85766002814954e-10!GO:0016568;chromatin modification;2.88085058808173e-10!GO:0005813;centrosome;2.89427948075201e-10!GO:0030964;NADH dehydrogenase complex (quinone);2.99690856856241e-10!GO:0045271;respiratory chain complex I;2.99690856856241e-10!GO:0005747;mitochondrial respiratory chain complex I;2.99690856856241e-10!GO:0006446;regulation of translational initiation;3.88577987489295e-10!GO:0042775;organelle ATP synthesis coupled electron transport;4.13688993188481e-10!GO:0042773;ATP synthesis coupled electron transport;4.13688993188481e-10!GO:0000087;M phase of mitotic cell cycle;4.36806193809937e-10!GO:0007067;mitosis;5.1545704355022e-10!GO:0005794;Golgi apparatus;8.25255577521779e-10!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;9.14457859799926e-10!GO:0006413;translational initiation;1.24495456128116e-09!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.36250451618616e-09!GO:0005815;microtubule organizing center;1.38208705671785e-09!GO:0031497;chromatin assembly;1.51262597366914e-09!GO:0065002;intracellular protein transport across a membrane;2.20288105699356e-09!GO:0006334;nucleosome assembly;2.4065302033859e-09!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);3.80904323183584e-09!GO:0006461;protein complex assembly;6.54208770584761e-09!GO:0051186;cofactor metabolic process;1.24379984154041e-08!GO:0009719;response to endogenous stimulus;1.32406761354487e-08!GO:0006793;phosphorus metabolic process;1.58780178589866e-08!GO:0006796;phosphate metabolic process;1.58780178589866e-08!GO:0000786;nucleosome;1.65620676163605e-08!GO:0007010;cytoskeleton organization and biogenesis;2.84935361966192e-08!GO:0007017;microtubule-based process;4.56807782196246e-08!GO:0051168;nuclear export;5.29859591804162e-08!GO:0006260;DNA replication;5.56891521179852e-08!GO:0005761;mitochondrial ribosome;5.60119356896603e-08!GO:0000313;organellar ribosome;5.60119356896603e-08!GO:0051726;regulation of cell cycle;6.64292529038888e-08!GO:0016772;transferase activity, transferring phosphorus-containing groups;8.63325869167203e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;8.70135492808265e-08!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;9.58087858384091e-08!GO:0007286;spermatid development;1.10928656879716e-07!GO:0000074;regulation of progression through cell cycle;1.16759289805163e-07!GO:0003743;translation initiation factor activity;1.52446513410368e-07!GO:0048515;spermatid differentiation;1.77950887434588e-07!GO:0006366;transcription from RNA polymerase II promoter;1.81431013987694e-07!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.17500214517725e-07!GO:0017038;protein import;2.59656656950649e-07!GO:0005783;endoplasmic reticulum;3.65581985689191e-07!GO:0032446;protein modification by small protein conjugation;3.75802816925672e-07!GO:0003724;RNA helicase activity;4.27018014692764e-07!GO:0005875;microtubule associated complex;4.68298931709463e-07!GO:0006732;coenzyme metabolic process;4.91961509048846e-07!GO:0005819;spindle;5.34982379661334e-07!GO:0016310;phosphorylation;5.93698848093722e-07!GO:0031072;heat shock protein binding;7.44736196088497e-07!GO:0000151;ubiquitin ligase complex;7.45525109126113e-07!GO:0005768;endosome;9.09593755069775e-07!GO:0030532;small nuclear ribonucleoprotein complex;9.14245066375151e-07!GO:0005667;transcription factor complex;9.44244459154878e-07!GO:0031988;membrane-bound vesicle;1.00639371347059e-06!GO:0048475;coated membrane;1.01050361843952e-06!GO:0030117;membrane coat;1.01050361843952e-06!GO:0016567;protein ubiquitination;1.01926163275022e-06!GO:0009056;catabolic process;1.20231908135913e-06!GO:0015986;ATP synthesis coupled proton transport;1.23123624738983e-06!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.23123624738983e-06!GO:0006888;ER to Golgi vesicle-mediated transport;1.23399939304756e-06!GO:0051246;regulation of protein metabolic process;1.40027447061949e-06!GO:0009259;ribonucleotide metabolic process;1.44069377719284e-06!GO:0016023;cytoplasmic membrane-bound vesicle;1.58187726863637e-06!GO:0043566;structure-specific DNA binding;1.80674687398154e-06!GO:0009060;aerobic respiration;1.80674687398154e-06!GO:0003713;transcription coactivator activity;1.97273005430703e-06!GO:0008654;phospholipid biosynthetic process;3.21682305133626e-06!GO:0045333;cellular respiration;3.23291344989286e-06!GO:0009055;electron carrier activity;3.32928547108865e-06!GO:0003697;single-stranded DNA binding;3.60968174098985e-06!GO:0008186;RNA-dependent ATPase activity;4.69008228072328e-06!GO:0031982;vesicle;4.69228057811326e-06!GO:0019829;cation-transporting ATPase activity;4.84718151020828e-06!GO:0000245;spliceosome assembly;4.88060735272081e-06!GO:0004674;protein serine/threonine kinase activity;4.95530267461211e-06!GO:0009260;ribonucleotide biosynthetic process;5.82830867759882e-06!GO:0045786;negative regulation of progression through cell cycle;6.00887901989322e-06!GO:0006163;purine nucleotide metabolic process;6.84776649319296e-06!GO:0009150;purine ribonucleotide metabolic process;6.93814519124679e-06!GO:0031410;cytoplasmic vesicle;7.01137931467865e-06!GO:0009199;ribonucleoside triphosphate metabolic process;7.49313385905183e-06!GO:0030120;vesicle coat;7.94058357195806e-06!GO:0030662;coated vesicle membrane;7.94058357195806e-06!GO:0015631;tubulin binding;8.09855875911059e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;8.5768729269988e-06!GO:0009144;purine nucleoside triphosphate metabolic process;8.5768729269988e-06!GO:0016740;transferase activity;8.9891996523985e-06!GO:0000226;microtubule cytoskeleton organization and biogenesis;1.03236922074662e-05!GO:0003729;mRNA binding;1.06560300976022e-05!GO:0044440;endosomal part;1.09844846909913e-05!GO:0010008;endosome membrane;1.09844846909913e-05!GO:0044432;endoplasmic reticulum part;1.09844846909913e-05!GO:0009141;nucleoside triphosphate metabolic process;1.175375459652e-05!GO:0006405;RNA export from nucleus;1.18559604469287e-05!GO:0051170;nuclear import;1.28610605660248e-05!GO:0005773;vacuole;1.47995385183132e-05!GO:0042254;ribosome biogenesis and assembly;1.5189171177231e-05!GO:0004004;ATP-dependent RNA helicase activity;1.59019942648398e-05!GO:0005793;ER-Golgi intermediate compartment;1.59187826707745e-05!GO:0046034;ATP metabolic process;1.611392244083e-05!GO:0006606;protein import into nucleus;1.64446719320133e-05!GO:0005741;mitochondrial outer membrane;1.70039623961888e-05!GO:0006164;purine nucleotide biosynthetic process;2.00047674544476e-05!GO:0009152;purine ribonucleotide biosynthetic process;2.00047674544476e-05!GO:0031968;organelle outer membrane;2.07081504738833e-05!GO:0009142;nucleoside triphosphate biosynthetic process;2.24825105015001e-05!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.24825105015001e-05!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.56911364190737e-05!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.56911364190737e-05!GO:0006099;tricarboxylic acid cycle;2.83312856834007e-05!GO:0046356;acetyl-CoA catabolic process;2.83312856834007e-05!GO:0015078;hydrogen ion transmembrane transporter activity;2.87707881261095e-05!GO:0019867;outer membrane;3.10089674367923e-05!GO:0043623;cellular protein complex assembly;3.31173906644329e-05!GO:0006754;ATP biosynthetic process;4.20039972830322e-05!GO:0006753;nucleoside phosphate metabolic process;4.20039972830322e-05!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;4.49520689160357e-05!GO:0004812;aminoacyl-tRNA ligase activity;4.49520689160357e-05!GO:0016875;ligase activity, forming carbon-oxygen bonds;4.49520689160357e-05!GO:0000323;lytic vacuole;4.84588584286161e-05!GO:0005764;lysosome;4.84588584286161e-05!GO:0000059;protein import into nucleus, docking;4.9281259564958e-05!GO:0016563;transcription activator activity;5.58495029175395e-05!GO:0006007;glucose catabolic process;6.9309230815415e-05!GO:0016779;nucleotidyltransferase activity;7.48805355554472e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;7.55167780689375e-05!GO:0051427;hormone receptor binding;7.90749005759206e-05!GO:0016469;proton-transporting two-sector ATPase complex;8.10838342300344e-05!GO:0030286;dynein complex;8.13179464627812e-05!GO:0043038;amino acid activation;9.98423525588845e-05!GO:0006418;tRNA aminoacylation for protein translation;9.98423525588845e-05!GO:0043039;tRNA aminoacylation;9.98423525588845e-05!GO:0045045;secretory pathway;0.000110159285381385!GO:0031324;negative regulation of cellular metabolic process;0.000118570473145304!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000127770645816113!GO:0006402;mRNA catabolic process;0.000129545896948264!GO:0006084;acetyl-CoA metabolic process;0.000139283641485502!GO:0035257;nuclear hormone receptor binding;0.000158994171964815!GO:0005669;transcription factor TFIID complex;0.000162938311631854!GO:0045259;proton-transporting ATP synthase complex;0.000163463825107395!GO:0009109;coenzyme catabolic process;0.000170189593548696!GO:0030036;actin cytoskeleton organization and biogenesis;0.000180205193222412!GO:0042175;nuclear envelope-endoplasmic reticulum network;0.000191939745563204!GO:0051187;cofactor catabolic process;0.000195666914595498!GO:0006613;cotranslational protein targeting to membrane;0.000195666914595498!GO:0030133;transport vesicle;0.000224687628472762!GO:0006406;mRNA export from nucleus;0.000240051547636778!GO:0009892;negative regulation of metabolic process;0.000291287755445768!GO:0046474;glycerophospholipid biosynthetic process;0.000297451195340519!GO:0005789;endoplasmic reticulum membrane;0.000299639984971512!GO:0005839;proteasome core complex (sensu Eukaryota);0.000368239484086871!GO:0016363;nuclear matrix;0.000372762079852974!GO:0019222;regulation of metabolic process;0.000389890306377185!GO:0016301;kinase activity;0.000394895080025242!GO:0005770;late endosome;0.000395232522863221!GO:0048523;negative regulation of cellular process;0.000412494296349062!GO:0006399;tRNA metabolic process;0.000463193408838187!GO:0005048;signal sequence binding;0.000494593585774627!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000518474058677306!GO:0048471;perinuclear region of cytoplasm;0.000535277482898121!GO:0006414;translational elongation;0.000657324212127375!GO:0046467;membrane lipid biosynthetic process;0.000713342295376813!GO:0008017;microtubule binding;0.00072324489439336!GO:0005856;cytoskeleton;0.000724593731564996!GO:0051321;meiotic cell cycle;0.000750275696274052!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.000791110041413475!GO:0015002;heme-copper terminal oxidase activity;0.000791110041413475!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.000791110041413475!GO:0004129;cytochrome-c oxidase activity;0.000791110041413475!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000800671322759487!GO:0005798;Golgi-associated vesicle;0.000811431332253929!GO:0005762;mitochondrial large ribosomal subunit;0.00081547946469208!GO:0000315;organellar large ribosomal subunit;0.00081547946469208!GO:0003714;transcription corepressor activity;0.0008428618829092!GO:0030029;actin filament-based process;0.0008428618829092!GO:0000922;spindle pole;0.000878085533247262!GO:0016481;negative regulation of transcription;0.000910373296298819!GO:0045454;cell redox homeostasis;0.000918156602118769!GO:0016564;transcription repressor activity;0.000924965735453649!GO:0030118;clathrin coat;0.000928489501804855!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00095366729221185!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00100145329539027!GO:0051252;regulation of RNA metabolic process;0.00106560802650539!GO:0044431;Golgi apparatus part;0.00106560802650539!GO:0051188;cofactor biosynthetic process;0.00116555788249273!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00118003319233097!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00118694096702125!GO:0008092;cytoskeletal protein binding;0.00121034498927555!GO:0031252;leading edge;0.00122931793222755!GO:0007059;chromosome segregation;0.00124895796891166!GO:0006364;rRNA processing;0.00126022894214416!GO:0006650;glycerophospholipid metabolic process;0.0012616550096207!GO:0044454;nuclear chromosome part;0.00129052133585603!GO:0050794;regulation of cellular process;0.00132950531701849!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00138851977977397!GO:0007051;spindle organization and biogenesis;0.0013964116723351!GO:0006352;transcription initiation;0.00150263775461864!GO:0031123;RNA 3'-end processing;0.00160007539774164!GO:0008250;oligosaccharyl transferase complex;0.00161358905693961!GO:0004298;threonine endopeptidase activity;0.00161474962394639!GO:0006338;chromatin remodeling;0.00163129785958327!GO:0016126;sterol biosynthetic process;0.00163297529158612!GO:0030518;steroid hormone receptor signaling pathway;0.00164327766334962!GO:0043488;regulation of mRNA stability;0.00170403000678171!GO:0043487;regulation of RNA stability;0.00170403000678171!GO:0005769;early endosome;0.00176844160446896!GO:0009108;coenzyme biosynthetic process;0.00181036170077987!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00185333056399778!GO:0006612;protein targeting to membrane;0.0018602971244753!GO:0006096;glycolysis;0.0019101986882736!GO:0006401;RNA catabolic process;0.00199005927076808!GO:0006261;DNA-dependent DNA replication;0.0020833526222254!GO:0019843;rRNA binding;0.00213701866896608!GO:0006891;intra-Golgi vesicle-mediated transport;0.00222310743419525!GO:0051789;response to protein stimulus;0.00222310743419525!GO:0006986;response to unfolded protein;0.00222310743419525!GO:0022890;inorganic cation transmembrane transporter activity;0.00225444977731899!GO:0016072;rRNA metabolic process;0.00227540000848019!GO:0031124;mRNA 3'-end processing;0.00248618105493422!GO:0008139;nuclear localization sequence binding;0.00249540824792107!GO:0003690;double-stranded DNA binding;0.0025644604716436!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.00257877553594198!GO:0051327;M phase of meiotic cell cycle;0.00274330927974076!GO:0007126;meiosis;0.00274330927974076!GO:0006752;group transfer coenzyme metabolic process;0.00282157610547116!GO:0003924;GTPase activity;0.00286832691061039!GO:0019899;enzyme binding;0.0029923903423621!GO:0000123;histone acetyltransferase complex;0.00330984821771557!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00330984821771557!GO:0007005;mitochondrion organization and biogenesis;0.00331546534484008!GO:0000775;chromosome, pericentric region;0.00334120697169995!GO:0031901;early endosome membrane;0.00337457094511133!GO:0046489;phosphoinositide biosynthetic process;0.0034179255367094!GO:0006607;NLS-bearing substrate import into nucleus;0.0034179255367094!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00348682508224381!GO:0051087;chaperone binding;0.00349331728058812!GO:0008610;lipid biosynthetic process;0.00350228762817707!GO:0004576;oligosaccharyl transferase activity;0.00357167002999339!GO:0008287;protein serine/threonine phosphatase complex;0.0035776068990452!GO:0015980;energy derivation by oxidation of organic compounds;0.00406900816332456!GO:0035258;steroid hormone receptor binding;0.00408962519168636!GO:0016787;hydrolase activity;0.00409174926972329!GO:0006611;protein export from nucleus;0.00411476103143127!GO:0003702;RNA polymerase II transcription factor activity;0.00413560394354072!GO:0051329;interphase of mitotic cell cycle;0.00413592982748209!GO:0003899;DNA-directed RNA polymerase activity;0.00431358551317711!GO:0045187;regulation of circadian sleep/wake cycle, sleep;0.00451445338323166!GO:0004667;prostaglandin-D synthase activity;0.00451445338323166!GO:0050802;circadian sleep/wake cycle, sleep;0.00451445338323166!GO:0022410;circadian sleep/wake cycle process;0.00451445338323166!GO:0042749;regulation of circadian sleep/wake cycle;0.00451445338323166!GO:0048487;beta-tubulin binding;0.00454975443243269!GO:0030132;clathrin coat of coated pit;0.00457042603808823!GO:0005876;spindle microtubule;0.0045870820728609!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00458999606888887!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00458999606888887!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00458999606888887!GO:0018196;peptidyl-asparagine modification;0.00475565453122698!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00475565453122698!GO:0046365;monosaccharide catabolic process;0.00493592801952793!GO:0045892;negative regulation of transcription, DNA-dependent;0.00498125861467202!GO:0016251;general RNA polymerase II transcription factor activity;0.00498325289836875!GO:0016859;cis-trans isomerase activity;0.00498325289836875!GO:0003777;microtubule motor activity;0.00500070823425512!GO:0019320;hexose catabolic process;0.00513313757492455!GO:0019783;small conjugating protein-specific protease activity;0.00529014105821815!GO:0003711;transcription elongation regulator activity;0.00541332532075077!GO:0030522;intracellular receptor-mediated signaling pathway;0.00542763910792703!GO:0006916;anti-apoptosis;0.00560942069382273!GO:0005684;U2-dependent spliceosome;0.00571478202249251!GO:0051920;peroxiredoxin activity;0.00608066185572593!GO:0005791;rough endoplasmic reticulum;0.00622965502599225!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.00631906553801962!GO:0043189;H4/H2A histone acetyltransferase complex;0.00635871454819251!GO:0000228;nuclear chromosome;0.00657973423441788!GO:0032940;secretion by cell;0.00663146710336215!GO:0016311;dephosphorylation;0.00665066443657971!GO:0051325;interphase;0.00666078555213848!GO:0040029;regulation of gene expression, epigenetic;0.00666078555213848!GO:0043021;ribonucleoprotein binding;0.0067365771938895!GO:0006997;nuclear organization and biogenesis;0.00684475401479053!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.00690729462802071!GO:0006383;transcription from RNA polymerase III promoter;0.0069231299488862!GO:0030384;phosphoinositide metabolic process;0.00713854948203957!GO:0008361;regulation of cell size;0.00714921485710459!GO:0007018;microtubule-based movement;0.00724030614351844!GO:0048519;negative regulation of biological process;0.00761955005880398!GO:0032508;DNA duplex unwinding;0.00766354972163323!GO:0032392;DNA geometric change;0.00766354972163323!GO:0016044;membrane organization and biogenesis;0.00789122411077727!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00790777071846619!GO:0009566;fertilization;0.00816728671110173!GO:0030521;androgen receptor signaling pathway;0.00823441470337626!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00826200221252206!GO:0004843;ubiquitin-specific protease activity;0.0086128706870915!GO:0030134;ER to Golgi transport vesicle;0.00862419177548556!GO:0030867;rough endoplasmic reticulum membrane;0.00886431238421359!GO:0006302;double-strand break repair;0.00909107935275857!GO:0033116;ER-Golgi intermediate compartment membrane;0.00909107935275857!GO:0003682;chromatin binding;0.00919136981020053!GO:0035042;fertilization, exchange of chromosomal proteins;0.00943284025583206!GO:0035041;sperm chromatin decondensation;0.00943284025583206!GO:0051128;regulation of cellular component organization and biogenesis;0.00950875971590478!GO:0046488;phosphatidylinositol metabolic process;0.00953051340904094!GO:0000776;kinetochore;0.00982238749488174!GO:0046164;alcohol catabolic process;0.00993078556210672!GO:0030658;transport vesicle membrane;0.010373366450985!GO:0006644;phospholipid metabolic process;0.0104651406400323!GO:0016049;cell growth;0.0104651406400323!GO:0005832;chaperonin-containing T-complex;0.0105201958853692!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0109210866615293!GO:0008073;ornithine decarboxylase inhibitor activity;0.011276578565517!GO:0005852;eukaryotic translation initiation factor 3 complex;0.0112885531122887!GO:0003746;translation elongation factor activity;0.0113269931012473!GO:0016903;oxidoreductase activity, acting on the aldehyde or oxo group of donors;0.0117632274239685!GO:0030127;COPII vesicle coat;0.0122457580420813!GO:0012507;ER to Golgi transport vesicle membrane;0.0122457580420813!GO:0043069;negative regulation of programmed cell death;0.0126903937281745!GO:0030880;RNA polymerase complex;0.0127344151386259!GO:0007338;single fertilization;0.0128109050851549!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0128421509026545!GO:0005885;Arp2/3 protein complex;0.0129821607251205!GO:0006595;polyamine metabolic process;0.0131727001195251!GO:0005905;coated pit;0.0132942742199081!GO:0006643;membrane lipid metabolic process;0.0133255258934318!GO:0008143;poly(A) binding;0.0133255258934318!GO:0043631;RNA polyadenylation;0.0135556833135955!GO:0030663;COPI coated vesicle membrane;0.014010991592618!GO:0030126;COPI vesicle coat;0.014010991592618!GO:0004221;ubiquitin thiolesterase activity;0.0141393937249169!GO:0008494;translation activator activity;0.0142504652652417!GO:0031323;regulation of cellular metabolic process;0.0142708988665924!GO:0001669;acrosome;0.0151759553892426!GO:0006376;mRNA splice site selection;0.0153264358369724!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0153264358369724!GO:0030137;COPI-coated vesicle;0.0154031850903218!GO:0006350;transcription;0.0158042758044253!GO:0035267;NuA4 histone acetyltransferase complex;0.0159143291109833!GO:0000287;magnesium ion binding;0.0160045200720713!GO:0008022;protein C-terminus binding;0.0163446306268543!GO:0006695;cholesterol biosynthetic process;0.0165154512944758!GO:0017166;vinculin binding;0.0166205425620654!GO:0030041;actin filament polymerization;0.0166447410384235!GO:0004364;glutathione transferase activity;0.0166677964859729!GO:0043066;negative regulation of apoptosis;0.0170417028924497!GO:0031902;late endosome membrane;0.0171936556211794!GO:0009117;nucleotide metabolic process;0.0175463103605629!GO:0016615;malate dehydrogenase activity;0.0176963070089985!GO:0005525;GTP binding;0.0179195381707034!GO:0043087;regulation of GTPase activity;0.0179454890651089!GO:0016272;prefoldin complex;0.0182869434491624!GO:0050681;androgen receptor binding;0.0186784860348206!GO:0000314;organellar small ribosomal subunit;0.0188884043567246!GO:0005763;mitochondrial small ribosomal subunit;0.0188884043567246!GO:0003725;double-stranded RNA binding;0.0188884043567246!GO:0016458;gene silencing;0.0189027972901203!GO:0008234;cysteine-type peptidase activity;0.0189111687854514!GO:0044450;microtubule organizing center part;0.0189111687854514!GO:0048500;signal recognition particle;0.0191548902697494!GO:0000139;Golgi membrane;0.0192746902920821!GO:0008094;DNA-dependent ATPase activity;0.0195906300723946!GO:0016197;endosome transport;0.0202445170150182!GO:0016744;transferase activity, transferring aldehyde or ketonic groups;0.020286631404861!GO:0001558;regulation of cell growth;0.0205881074959044!GO:0005657;replication fork;0.0211794691085136!GO:0016791;phosphoric monoester hydrolase activity;0.0217184902421506!GO:0000793;condensed chromosome;0.0219366934690947!GO:0005637;nuclear inner membrane;0.0221016229947982!GO:0008154;actin polymerization and/or depolymerization;0.0228110414194797!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0236950390645538!GO:0000428;DNA-directed RNA polymerase complex;0.0236950390645538!GO:0007030;Golgi organization and biogenesis;0.0239925746401649!GO:0004721;phosphoprotein phosphatase activity;0.0242235503617178!GO:0051287;NAD binding;0.0246836755282842!GO:0043681;protein import into mitochondrion;0.0250278785668845!GO:0000082;G1/S transition of mitotic cell cycle;0.0254229902627736!GO:0009434;microtubule-based flagellum;0.0255530728232947!GO:0000118;histone deacetylase complex;0.0264829488693056!GO:0006378;mRNA polyadenylation;0.027187153250042!GO:0030119;AP-type membrane coat adaptor complex;0.0272239609279428!GO:0008144;drug binding;0.0273146191981017!GO:0006268;DNA unwinding during replication;0.0273390652129831!GO:0006661;phosphatidylinositol biosynthetic process;0.0275581904439165!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0275889859096437!GO:0016584;nucleosome positioning;0.0278775743296279!GO:0016853;isomerase activity;0.0288330448786806!GO:0000209;protein polyubiquitination;0.0289291679329401!GO:0012501;programmed cell death;0.0290284353243898!GO:0016790;thiolester hydrolase activity;0.0290363992507675!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0290363992507675!GO:0030027;lamellipodium;0.0292820430412774!GO:0007050;cell cycle arrest;0.0294155833408954!GO:0005868;cytoplasmic dynein complex;0.0295391354078907!GO:0003727;single-stranded RNA binding;0.0295391354078907!GO:0003684;damaged DNA binding;0.0301999767151623!GO:0008270;zinc ion binding;0.0304548941759924!GO:0000075;cell cycle checkpoint;0.030499449328803!GO:0008180;signalosome;0.0306208330321425!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0310494329873546!GO:0030705;cytoskeleton-dependent intracellular transport;0.031291463952488!GO:0030660;Golgi-associated vesicle membrane;0.0322259428751099!GO:0031461;cullin-RING ubiquitin ligase complex;0.032324986481222!GO:0031970;organelle envelope lumen;0.0326370272559828!GO:0043044;ATP-dependent chromatin remodeling;0.0328719887340874!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0328719887340874!GO:0006892;post-Golgi vesicle-mediated transport;0.0330475308940858!GO:0019208;phosphatase regulator activity;0.033161967014784!GO:0005788;endoplasmic reticulum lumen;0.033161967014784!GO:0051721;protein phosphatase 2A binding;0.0331815747982347!GO:0050789;regulation of biological process;0.0333983765240964!GO:0003678;DNA helicase activity;0.0341272593812244!GO:0006944;membrane fusion;0.0345357357677711!GO:0035303;regulation of dephosphorylation;0.0347060975247633!GO:0006915;apoptosis;0.0347744689709142!GO:0007098;centrosome cycle;0.0352121810065207!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.0357430212616769!GO:0015399;primary active transmembrane transporter activity;0.0357430212616769!GO:0006108;malate metabolic process;0.0364571135747954!GO:0004722;protein serine/threonine phosphatase activity;0.0377863540889246!GO:0005784;translocon complex;0.0377948737242334!GO:0006310;DNA recombination;0.0379604024616717!GO:0030176;integral to endoplasmic reticulum membrane;0.0383067688022777!GO:0030433;ER-associated protein catabolic process;0.0403618978290353!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0403618978290353!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0405207503966519!GO:0045047;protein targeting to ER;0.0405207503966519!GO:0016581;NuRD complex;0.0406178205664559!GO:0000910;cytokinesis;0.0407432268208247!GO:0051540;metal cluster binding;0.0408913145767534!GO:0051536;iron-sulfur cluster binding;0.0408913145767534!GO:0008147;structural constituent of bone;0.0412627040784835!GO:0030320;cellular monovalent inorganic anion homeostasis;0.041266876804156!GO:0055083;monovalent inorganic anion homeostasis;0.041266876804156!GO:0055064;chloride ion homeostasis;0.041266876804156!GO:0030644;cellular chloride ion homeostasis;0.041266876804156!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0412903440441543!GO:0010468;regulation of gene expression;0.0412903440441543!GO:0009081;branched chain family amino acid metabolic process;0.0414525660211785!GO:0030131;clathrin adaptor complex;0.0415742207680482!GO:0043414;biopolymer methylation;0.0417054517738111!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0419086952338691!GO:0004802;transketolase activity;0.0420491388288154!GO:0031625;ubiquitin protein ligase binding;0.0422040568219986!GO:0000339;RNA cap binding;0.0425970291354177!GO:0008219;cell death;0.0425970291354177!GO:0016265;death;0.0425970291354177!GO:0051052;regulation of DNA metabolic process;0.0425970291354177!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0429231119255119!GO:0007289;spermatid nuclear differentiation;0.0430262490659163!GO:0051297;centrosome organization and biogenesis;0.0438516116223219!GO:0031023;microtubule organizing center organization and biogenesis;0.0438516116223219!GO:0043126;regulation of 1-phosphatidylinositol 4-kinase activity;0.0438516116223219!GO:0046813;virion attachment, binding of host cell surface receptor;0.0438516116223219!GO:0043128;positive regulation of 1-phosphatidylinositol 4-kinase activity;0.0438516116223219!GO:0019642;anaerobic glycolysis;0.0440953600102446!GO:0004459;L-lactate dehydrogenase activity;0.0440953600102446!GO:0007076;mitotic chromosome condensation;0.044397820247277!GO:0006818;hydrogen transport;0.0449982467485403!GO:0043666;regulation of phosphoprotein phosphatase activity;0.0452110127693434!GO:0005758;mitochondrial intermembrane space;0.0460411115155682!GO:0019318;hexose metabolic process;0.0467750507219709!GO:0043130;ubiquitin binding;0.0470707930707861!GO:0032182;small conjugating protein binding;0.0470707930707861!GO:0004672;protein kinase activity;0.0477315823305864!GO:0008536;Ran GTPase binding;0.0477315823305864!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0486414471387707!GO:0032318;regulation of Ras GTPase activity;0.0491658430747306!GO:0015992;proton transport;0.0498097779801146 | |||
|sample_id=10096 | |sample_id=10096 | ||
|sample_note=biological replicate | |sample_note=biological replicate | ||
| Line 76: | Line 100: | ||
|sample_tissue=testis | |sample_tissue=testis | ||
|top_motifs=MYB:10.0864286341;JUN:7.30649851472;RFX1:5.94731829188;ZNF148:4.707496114;NRF1:3.97020896235;SOX17:3.57828104986;NFY{A,B,C}:3.23235705863;BREu{core}:2.78964234405;RFX2..5_RFXANK_RFXAP:2.72147418388;HLF:2.29781240706;GFI1:1.89937320879;ATF2:1.89676354268;ATF4:1.7758756737;ZNF143:1.77169046649;ELK1,4_GABP{A,B1}:1.64321891611;ZFP161:1.61256153861;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.58874724623;NR5A1,2:1.56057557209;FOXN1:1.45356052254;ZBTB16:1.45016916429;SP1:1.43539310045;CREB1:1.36700732239;TEF:1.28072957545;NFIX:1.22453493655;PPARG:1.19440725598;SOX5:1.1901004234;HIF1A:1.13794343925;PITX1..3:0.930040880311;ZIC1..3:0.900969718891;POU6F1:0.831542091063;RXR{A,B,G}:0.807805907362;MTE{core}:0.747665353271;YY1:0.741661855782;TFAP2{A,C}:0.724063823346;ESR1:0.690805263842;HIC1:0.624046777344;XCPE1{core}:0.604777807924;GFI1B:0.582558471684;E2F1..5:0.501103840175;HOXA9_MEIS1:0.461819016117;AR:0.417528926204;bHLH_family:0.380236275922;TFAP2B:0.296931447456;EGR1..3:0.289960552255;NFE2L1:0.282240759808;RREB1:0.26938269631;NKX2-1,4:0.235629426913;NKX3-1:0.23435118842;TFDP1:0.229729571608;ATF6:0.1958112042;PATZ1:0.134949568414;NKX6-1,2:0.125160394449;ZNF423:0.117444722147;HOX{A4,D4}:0.103759656261;EN1,2:0.0825188562409;SNAI1..3:0.080629191679;DMAP1_NCOR{1,2}_SMARC:0.0804570436801;PAX5:0.0792604330331;MTF1:0.0788652888092;IKZF2:0.0536691971517;FOXP1:0.0425025401189;SREBF1,2:0.0416577900706;MED-1{core}:0.0377036225339;RBPJ:0.0293857142075;STAT5{A,B}:0.0188868996803;POU3F1..4:0.0165582242773;GCM1,2:-0.00993599284746;ZBTB6:-0.0346166690073;GZF1:-0.0672392016831;SRF:-0.0853820187491;HSF1,2:-0.110458643952;MYBL2:-0.138850561575;REST:-0.152217204118;LHX3,4:-0.155307062468;SOX2:-0.1639874218;SOX{8,9,10}:-0.165681484707;ATF5_CREB3:-0.167831592503;ALX1:-0.195457471917;MYFfamily:-0.19915692245;PBX1:-0.203467507251;ZEB1:-0.230795066096;EVI1:-0.240199797242;NHLH1,2:-0.265962851489;TEAD1:-0.318253687815;TGIF1:-0.319441646253;PAX1,9:-0.352994749132;TBP:-0.356881354001;GTF2A1,2:-0.35952162664;POU2F1..3:-0.379934491344;HNF4A_NR2F1,2:-0.380064398906;HBP1_HMGB_SSRP1_UBTF:-0.385193744544;HNF1A:-0.392090196003;UFEwm:-0.426471942283;PAX8:-0.441680143903;LMO2:-0.482896540615;GTF2I:-0.502203148936;TOPORS:-0.523912494693;NR3C1:-0.528472682792;PAX3,7:-0.544845220536;RXRA_VDR{dimer}:-0.54529895043;AIRE:-0.58484550891;NANOG{mouse}:-0.594013681728;GATA6:-0.638513212743;FOX{D1,D2}:-0.674995526733;STAT1,3:-0.714482581742;ESRRA:-0.742025485681;HMX1:-0.762401854693;FOXD3:-0.768382131488;CUX2:-0.768403246714;MAZ:-0.770107117237;HOX{A6,A7,B6,B7}:-0.777772633312;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.799110882599;ONECUT1,2:-0.807302809542;TFAP4:-0.849854627687;MEF2{A,B,C,D}:-0.862937339679;PDX1:-0.863265561769;MZF1:-0.880408125739;HAND1,2:-0.930472312755;GLI1..3:-0.939449295799;AHR_ARNT_ARNT2:-0.97166797392;HOX{A5,B5}:-0.973299785583;TP53:-0.984571147066;SPIB:-0.998548781676;HES1:-0.999086558721;PRRX1,2:-1.00053572685;MYOD1:-1.01199299946;TFCP2:-1.04024509069;PAX2:-1.04111896929;SPI1:-1.07436548368;TBX4,5:-1.09989591045;TLX1..3_NFIC{dimer}:-1.10034397782;KLF4:-1.10176968209;GATA4:-1.11378482276;FOXM1:-1.12099419532;BPTF:-1.13118482382;DBP:-1.16476959584;IRF7:-1.1703812567;NFKB1_REL_RELA:-1.18721129475;CDX1,2,4:-1.19647811893;NKX2-3_NKX2-5:-1.22908653954;ADNP_IRX_SIX_ZHX:-1.24524236413;RUNX1..3:-1.2500382483;FOS_FOS{B,L1}_JUN{B,D}:-1.25114316637;EBF1:-1.2746834086;FOXO1,3,4:-1.29482734015;TLX2:-1.31336827889;IKZF1:-1.33353697998;FOXQ1:-1.34377985016;NKX3-2:-1.35668073041;NKX2-2,8:-1.35785401655;ETS1,2:-1.36277712851;NFE2:-1.37626661819;T:-1.40018365893;BACH2:-1.41117395696;ELF1,2,4:-1.42947871571;CDC5L:-1.43976354828;ALX4:-1.44044088474;FOX{F1,F2,J1}:-1.44897524059;FOXP3:-1.46297929845;FOSL2:-1.47413588838;TAL1_TCF{3,4,12}:-1.48604910378;IRF1,2:-1.50999376141;LEF1_TCF7_TCF7L1,2:-1.51853060084;RORA:-1.53610256939;XBP1:-1.61060678248;ZNF384:-1.6236676645;VSX1,2:-1.63798164625;SPZ1:-1.68002868737;NR6A1:-1.73600613659;EP300:-1.74639243884;FOXA2:-1.75377336565;SMAD1..7,9:-1.8147297016;NR1H4:-1.84876875708;NFIL3:-1.89712253523;CEBPA,B_DDIT3:-1.91736107783;NFE2L2:-1.96864965697;OCT4_SOX2{dimer}:-1.9907526461;POU1F1:-2.02841732661;PAX6:-2.08878518426;ZNF238:-2.10194572792;STAT2,4,6:-2.14512294725;PRDM1:-2.16486953249;MAFB:-2.17177872798;FOXL1:-2.17547190908;NFATC1..3:-2.19671917853;ARID5B:-2.28379208869;NANOG:-2.72959838955;POU5F1:-2.78517402996;HMGA1,2:-2.88254795919;CRX:-3.07822750668;PAX4:-3.15239800724;FOX{I1,J2}:-4.54855561992 | |top_motifs=MYB:10.0864286341;JUN:7.30649851472;RFX1:5.94731829188;ZNF148:4.707496114;NRF1:3.97020896235;SOX17:3.57828104986;NFY{A,B,C}:3.23235705863;BREu{core}:2.78964234405;RFX2..5_RFXANK_RFXAP:2.72147418388;HLF:2.29781240706;GFI1:1.89937320879;ATF2:1.89676354268;ATF4:1.7758756737;ZNF143:1.77169046649;ELK1,4_GABP{A,B1}:1.64321891611;ZFP161:1.61256153861;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.58874724623;NR5A1,2:1.56057557209;FOXN1:1.45356052254;ZBTB16:1.45016916429;SP1:1.43539310045;CREB1:1.36700732239;TEF:1.28072957545;NFIX:1.22453493655;PPARG:1.19440725598;SOX5:1.1901004234;HIF1A:1.13794343925;PITX1..3:0.930040880311;ZIC1..3:0.900969718891;POU6F1:0.831542091063;RXR{A,B,G}:0.807805907362;MTE{core}:0.747665353271;YY1:0.741661855782;TFAP2{A,C}:0.724063823346;ESR1:0.690805263842;HIC1:0.624046777344;XCPE1{core}:0.604777807924;GFI1B:0.582558471684;E2F1..5:0.501103840175;HOXA9_MEIS1:0.461819016117;AR:0.417528926204;bHLH_family:0.380236275922;TFAP2B:0.296931447456;EGR1..3:0.289960552255;NFE2L1:0.282240759808;RREB1:0.26938269631;NKX2-1,4:0.235629426913;NKX3-1:0.23435118842;TFDP1:0.229729571608;ATF6:0.1958112042;PATZ1:0.134949568414;NKX6-1,2:0.125160394449;ZNF423:0.117444722147;HOX{A4,D4}:0.103759656261;EN1,2:0.0825188562409;SNAI1..3:0.080629191679;DMAP1_NCOR{1,2}_SMARC:0.0804570436801;PAX5:0.0792604330331;MTF1:0.0788652888092;IKZF2:0.0536691971517;FOXP1:0.0425025401189;SREBF1,2:0.0416577900706;MED-1{core}:0.0377036225339;RBPJ:0.0293857142075;STAT5{A,B}:0.0188868996803;POU3F1..4:0.0165582242773;GCM1,2:-0.00993599284746;ZBTB6:-0.0346166690073;GZF1:-0.0672392016831;SRF:-0.0853820187491;HSF1,2:-0.110458643952;MYBL2:-0.138850561575;REST:-0.152217204118;LHX3,4:-0.155307062468;SOX2:-0.1639874218;SOX{8,9,10}:-0.165681484707;ATF5_CREB3:-0.167831592503;ALX1:-0.195457471917;MYFfamily:-0.19915692245;PBX1:-0.203467507251;ZEB1:-0.230795066096;EVI1:-0.240199797242;NHLH1,2:-0.265962851489;TEAD1:-0.318253687815;TGIF1:-0.319441646253;PAX1,9:-0.352994749132;TBP:-0.356881354001;GTF2A1,2:-0.35952162664;POU2F1..3:-0.379934491344;HNF4A_NR2F1,2:-0.380064398906;HBP1_HMGB_SSRP1_UBTF:-0.385193744544;HNF1A:-0.392090196003;UFEwm:-0.426471942283;PAX8:-0.441680143903;LMO2:-0.482896540615;GTF2I:-0.502203148936;TOPORS:-0.523912494693;NR3C1:-0.528472682792;PAX3,7:-0.544845220536;RXRA_VDR{dimer}:-0.54529895043;AIRE:-0.58484550891;NANOG{mouse}:-0.594013681728;GATA6:-0.638513212743;FOX{D1,D2}:-0.674995526733;STAT1,3:-0.714482581742;ESRRA:-0.742025485681;HMX1:-0.762401854693;FOXD3:-0.768382131488;CUX2:-0.768403246714;MAZ:-0.770107117237;HOX{A6,A7,B6,B7}:-0.777772633312;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.799110882599;ONECUT1,2:-0.807302809542;TFAP4:-0.849854627687;MEF2{A,B,C,D}:-0.862937339679;PDX1:-0.863265561769;MZF1:-0.880408125739;HAND1,2:-0.930472312755;GLI1..3:-0.939449295799;AHR_ARNT_ARNT2:-0.97166797392;HOX{A5,B5}:-0.973299785583;TP53:-0.984571147066;SPIB:-0.998548781676;HES1:-0.999086558721;PRRX1,2:-1.00053572685;MYOD1:-1.01199299946;TFCP2:-1.04024509069;PAX2:-1.04111896929;SPI1:-1.07436548368;TBX4,5:-1.09989591045;TLX1..3_NFIC{dimer}:-1.10034397782;KLF4:-1.10176968209;GATA4:-1.11378482276;FOXM1:-1.12099419532;BPTF:-1.13118482382;DBP:-1.16476959584;IRF7:-1.1703812567;NFKB1_REL_RELA:-1.18721129475;CDX1,2,4:-1.19647811893;NKX2-3_NKX2-5:-1.22908653954;ADNP_IRX_SIX_ZHX:-1.24524236413;RUNX1..3:-1.2500382483;FOS_FOS{B,L1}_JUN{B,D}:-1.25114316637;EBF1:-1.2746834086;FOXO1,3,4:-1.29482734015;TLX2:-1.31336827889;IKZF1:-1.33353697998;FOXQ1:-1.34377985016;NKX3-2:-1.35668073041;NKX2-2,8:-1.35785401655;ETS1,2:-1.36277712851;NFE2:-1.37626661819;T:-1.40018365893;BACH2:-1.41117395696;ELF1,2,4:-1.42947871571;CDC5L:-1.43976354828;ALX4:-1.44044088474;FOX{F1,F2,J1}:-1.44897524059;FOXP3:-1.46297929845;FOSL2:-1.47413588838;TAL1_TCF{3,4,12}:-1.48604910378;IRF1,2:-1.50999376141;LEF1_TCF7_TCF7L1,2:-1.51853060084;RORA:-1.53610256939;XBP1:-1.61060678248;ZNF384:-1.6236676645;VSX1,2:-1.63798164625;SPZ1:-1.68002868737;NR6A1:-1.73600613659;EP300:-1.74639243884;FOXA2:-1.75377336565;SMAD1..7,9:-1.8147297016;NR1H4:-1.84876875708;NFIL3:-1.89712253523;CEBPA,B_DDIT3:-1.91736107783;NFE2L2:-1.96864965697;OCT4_SOX2{dimer}:-1.9907526461;POU1F1:-2.02841732661;PAX6:-2.08878518426;ZNF238:-2.10194572792;STAT2,4,6:-2.14512294725;PRDM1:-2.16486953249;MAFB:-2.17177872798;FOXL1:-2.17547190908;NFATC1..3:-2.19671917853;ARID5B:-2.28379208869;NANOG:-2.72959838955;POU5F1:-2.78517402996;HMGA1,2:-2.88254795919;CRX:-3.07822750668;PAX4:-3.15239800724;FOX{I1,J2}:-4.54855561992 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10096-102C6;search_select_hide=table117:FF:10096-102C6 | |||
}} | }} | ||
Latest revision as of 12:21, 3 June 2020
| Name: | testis, adult, pool2 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12998 |
| Sample type: | tissues |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12998
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12998
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.178 |
| 10 | 10 | 0.355 |
| 100 | 100 | 0.565 |
| 101 | 101 | 0.529 |
| 102 | 102 | 0.482 |
| 103 | 103 | 0.419 |
| 104 | 104 | 0.59 |
| 105 | 105 | 0.233 |
| 106 | 106 | 1.50768e-6 |
| 107 | 107 | 0.00332 |
| 108 | 108 | 0.282 |
| 109 | 109 | 0.861 |
| 11 | 11 | 0.132 |
| 110 | 110 | 0.381 |
| 111 | 111 | 0.978 |
| 112 | 112 | 0.0248 |
| 113 | 113 | 0.766 |
| 114 | 114 | 0.329 |
| 115 | 115 | 0.793 |
| 116 | 116 | 0.374 |
| 117 | 117 | 0.599 |
| 118 | 118 | 0.505 |
| 119 | 119 | 0.168 |
| 12 | 12 | 0.887 |
| 120 | 120 | 0.0753 |
| 121 | 121 | 0.453 |
| 122 | 122 | 0.892 |
| 123 | 123 | 0.313 |
| 124 | 124 | 0.368 |
| 125 | 125 | 0.662 |
| 126 | 126 | 0.659 |
| 127 | 127 | 0.264 |
| 128 | 128 | 0.00178 |
| 129 | 129 | 0.561 |
| 13 | 13 | 0.689 |
| 130 | 130 | 0.402 |
| 131 | 131 | 0.257 |
| 132 | 132 | 0.631 |
| 133 | 133 | 0.968 |
| 134 | 134 | 0.802 |
| 135 | 135 | 0.128 |
| 136 | 136 | 0.0305 |
| 137 | 137 | 0.227 |
| 138 | 138 | 0.116 |
| 139 | 139 | 0.399 |
| 14 | 14 | 0.421 |
| 140 | 140 | 0.151 |
| 141 | 141 | 0.162 |
| 142 | 142 | 0.919 |
| 143 | 143 | 0.993 |
| 144 | 144 | 0.949 |
| 145 | 145 | 0.152 |
| 146 | 146 | 0.644 |
| 147 | 147 | 0.421 |
| 148 | 148 | 0.137 |
| 149 | 149 | 0.0707 |
| 15 | 15 | 0.362 |
| 150 | 150 | 0.358 |
| 151 | 151 | 0.172 |
| 152 | 152 | 0.0533 |
| 153 | 153 | 0.283 |
| 154 | 154 | 0.211 |
| 155 | 155 | 0.315 |
| 156 | 156 | 0.597 |
| 157 | 157 | 0.876 |
| 158 | 158 | 0.0493 |
| 159 | 159 | 0.43 |
| 16 | 16 | 0.334 |
| 160 | 160 | 0.0346 |
| 161 | 161 | 0.916 |
| 162 | 162 | 0.818 |
| 163 | 163 | 0.195 |
| 164 | 164 | 0.00448 |
| 165 | 165 | 0.358 |
| 166 | 166 | 0.375 |
| 167 | 167 | 0.812 |
| 168 | 168 | 0.254 |
| 169 | 169 | 0.0576 |
| 17 | 17 | 0.111 |
| 18 | 18 | 0.0775 |
| 19 | 19 | 0.35 |
| 2 | 2 | 0.115 |
| 20 | 20 | 0.325 |
| 21 | 21 | 0.548 |
| 22 | 22 | 0.314 |
| 23 | 23 | 0.00914 |
| 24 | 24 | 0.811 |
| 25 | 25 | 0.743 |
| 26 | 26 | 0.296 |
| 27 | 27 | 0.0967 |
| 28 | 28 | 0.823 |
| 29 | 29 | 0.969 |
| 3 | 3 | 0.0916 |
| 30 | 30 | 0.792 |
| 31 | 31 | 0.208 |
| 32 | 32 | 0.2 |
| 33 | 33 | 0.754 |
| 34 | 34 | 0.502 |
| 35 | 35 | 0.418 |
| 36 | 36 | 0.0896 |
| 37 | 37 | 0.119 |
| 38 | 38 | 0.501 |
| 39 | 39 | 0.713 |
| 4 | 4 | 0.0552 |
| 40 | 40 | 0.754 |
| 41 | 41 | 0.263 |
| 42 | 42 | 0.329 |
| 43 | 43 | 0.19 |
| 44 | 44 | 0.354 |
| 45 | 45 | 0.631 |
| 46 | 46 | 0.114 |
| 47 | 47 | 0.469 |
| 48 | 48 | 0.379 |
| 49 | 49 | 0.865 |
| 5 | 5 | 0.218 |
| 50 | 50 | 0.978 |
| 51 | 51 | 0.191 |
| 52 | 52 | 0.118 |
| 53 | 53 | 0.279 |
| 54 | 54 | 0.216 |
| 55 | 55 | 0.147 |
| 56 | 56 | 0.238 |
| 57 | 57 | 0.167 |
| 58 | 58 | 0.511 |
| 59 | 59 | 0.0469 |
| 6 | 6 | 0.747 |
| 60 | 60 | 0.0272 |
| 61 | 61 | 0.752 |
| 62 | 62 | 0.258 |
| 63 | 63 | 0.204 |
| 64 | 64 | 0.55 |
| 65 | 65 | 0.119 |
| 66 | 66 | 3.61844e-8 |
| 67 | 67 | 0.516 |
| 68 | 68 | 0.262 |
| 69 | 69 | 0.792 |
| 7 | 7 | 0.7 |
| 70 | 70 | 0.23 |
| 71 | 71 | 0.128 |
| 72 | 72 | 0.495 |
| 73 | 73 | 0.137 |
| 74 | 74 | 0.273 |
| 75 | 75 | 0.312 |
| 76 | 76 | 0.725 |
| 77 | 77 | 0.0759 |
| 78 | 78 | 0.0652 |
| 79 | 79 | 0.594 |
| 8 | 8 | 0.433 |
| 80 | 80 | 0.34 |
| 81 | 81 | 0.299 |
| 82 | 82 | 0.15 |
| 83 | 83 | 0.37 |
| 84 | 84 | 0.515 |
| 85 | 85 | 0.0273 |
| 86 | 86 | 0.362 |
| 87 | 87 | 0.385 |
| 88 | 88 | 0.699 |
| 89 | 89 | 0.118 |
| 9 | 9 | 0.335 |
| 90 | 90 | 0.101 |
| 91 | 91 | 0.182 |
| 92 | 92 | 0.0717 |
| 93 | 93 | 0.324 |
| 94 | 94 | 0.0133 |
| 95 | 95 | 0.854 |
| 96 | 96 | 0.42 |
| 97 | 97 | 0.866 |
| 98 | 98 | 0.681 |
| 99 | 99 | 0.271 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12998
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0010026 human testis - adult sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0000473 (testis)
0000991 (gonad)
0000479 (tissue)
0005156 (reproductive structure)
0000466 (immaterial anatomical entity)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000990 (reproductive system)
0002553 (anatomical cavity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003135 (male reproductive organ)
0003133 (reproductive organ)
0002323 (body cavity)
0000464 (anatomical space)
0004458 (body cavity or lining)
0010317 (germ layer / neural crest derived structure)
0003101 (male organism)
0000079 (male reproductive system)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010026 (human testis - adult sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0009117 (indifferent gonad)
UBERON:0002532 (epiblast (generic))
UBERON:0006603 (presumptive mesoderm)
UBERON:0005564 (gonad primordium)
UBERON:0010316 (germ layer / neural crest)
