FF:12233-129G1: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00005507 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |accession_numbers=CAGE;DRX008087;DRR008959;DRZ000384;DRZ001769;DRZ011734;DRZ013119 | ||
|ancestors_in_anatomy_facet=UBERON:0002384,UBERON:0000479,UBERON:0000061,UBERON:0000465,UBERON:0001062 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0002320,CL:0002371,CL:0000325,CL:0000255,CL:0000136 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000266 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/mature%2520adipocyte%252c%2520donor3.CNhs12560.12233-129G1.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/mature%2520adipocyte%252c%2520donor3.CNhs12560.12233-129G1.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/mature%2520adipocyte%252c%2520donor3.CNhs12560.12233-129G1.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/mature%2520adipocyte%252c%2520donor3.CNhs12560.12233-129G1.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/mature%2520adipocyte%252c%2520donor3.CNhs12560.12233-129G1.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:12233-129G1 | |id=FF:12233-129G1 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000266 | ||
|is_obsolete= | |||
|library_id=CNhs12560 | |||
|library_id_phase_based=2:CNhs12560 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;12233 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;12233 | |||
|name=mature adipocyte, donor3 | |name=mature adipocyte, donor3 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12560,LSID921,release012,COMPLETED | |profile_hcage=CNhs12560,LSID921,release012,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0.058029039552438,0,0,0,0,-0.160318030086386,0,-0.277362132193514,-0.282403560576942,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.153323010348428,0,0,0,0.103775601809223,0,-0.0979578962680575,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,0,0,-0.201895981761271,0,0.207551203618446,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0,0,0,0,-0.0969923612426051,0,0,0.0187144518917787,0,0,0,0,0,0,0,0,0,0,0.283083287194968,0,0,0,0,0,0,0,0.103775601809223,0,0,0,0,0,0,0,0,0,0.0576112522930505,0.185274072236615,0,0,0.24877020848644,0,-0.0980353512377064,-0.138477200800895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10533491849834,0,0,0,-0.163521668000115,-0.329453988771259,0,0,0,0,0,0 | |||
|repeat_enrich_byname=0,0,0.283083287194968,0,-0.0980353512377064,0,0,0.207551203618446,0,0,0,0,0,0,0,0,0.205844757242504,0,-0.19100293155704,-0.0274570634185962,0,0,-0.0533719139078435,0,0.574853932509625,0,0,0,0,0,0,0,0.0794313366658816,0,0.802488816442539,0.058029039552438,0,0,0,0.173591984126368,-0.0223889437034392,0,-0.17425806114951,-0.0683442610773682,0,0,0,0,0.364011820339404,0,0.282537541047861,0.0333379107814584,0,0.42125480693601,0.0692534202124957,0,0,0,-0.16940594083424,-0.56535528086482,0,0,0.213164222209808,0.692762893608954,0,0.116058079104876,0.710741381896515,0,0.577235239401848,-0.0457509942149454,0,-0.0706505557066545,0,0,0,0,0,0,0,0,0,0,0,0.550164346409118,-0.0439053094840008,-0.0304099808375785,0,0,0,0.249515193015108,0,0,1.27508431603172,-0.152377065138057,0.0890709616700505,0.444337649940198,0,0.150633905518155,-0.0449933899074589,-0.342424122101603,0.059376345497087,-0.0313437702662628,0.533378551128469,0,0.0849835544282762,0.151177025119775,-0.000123968451066131,0.110150651825015,-0.0688856000257508,-0.508048237608788,-0.101431903454386,0,0,0.108665924116358,0.216116360888205,0,0,-0.282563510858327,0.189230532350623,0.091357489367599,0.147613043234064,0.127267598738244,0.0572904614285092,1.02166101121152,0.265923817781721,0,0.283547369705437,0,0.723360270678316,0.0747482397381761,-0.0470878788602336,0.195348041018312,-0.268421542319588,0,0.703493681985047,-0.0683442610773682,0,0.036024353284729,0.0998885502526248,0,0.283083287194968,-0.00392329836178706,0,0,-0.113371372499501,0,0,-0.112656380445896,0.518012291480221,-0.0253043579370985,0,0.048547148799496,0,0.205102292610273,0,-0.0510017235331586,0.207551203618446,0.0493304784977992,0.0547708262628556,0,0.267442823337012,-0.413578581753145,0.126949257533402,0.37054814447323,0.0576112522930505,0.122429434256123,0.452364076575148,0.185602887162578,0.556195473592155,0.0784968554946543,0.027931246629588,0.115223948961958,-0.0906018006534127,-0.396414844426556,0.051285723537406,0.0825979994310187,0.116058079104876,0.29521608747872,0,0.085502866670031,0,-0.0461457175268081,0.581907417286615,1.20306018335097,0.0925196788189009,0,-0.174701530168692,1.76858558786787,0,0,0,0,-0.0343090042297636,-0.000249313051192024,0.525490625681184,-0.138989456679195,0,0.0628212096421976,0,0,0.143352794928349,-0.119417958659513,0,-0.432035078618461,-0.609202914213396,-0.604216041195295,-0.115971073434934,0,0,-0.0708464054830998,0,1.16074472832547,0.638167410789201,0,-0.272378693099542,0.199697291041312,0.059612405239578,0.151114742518983,0,0,0.105555521229792,0.669888147923364,0.0404629553957115,0,0,-0.191852257046386,-0.116628112990133,0,0.058029039552438,0,-0.091490088748541,0.0816744023467431,0,0,0,0,0,0,-0.13959634461569,0.0485836946251537,0.403417024841602,-0.445951991492986,0,0.207551203618446,0,0,0,0,0,0.116058079104876,0.714912111575279,-0.0405793422855208,-0.12301741567642,0,0,0,0,0.0673598846414934,0.144168068764368,0,0.0756884971208145,0,0.287426966254813,0,0,0.121410213829235,0,0,0,0.141541643597484,-0.057730457053664,-0.465054752904512,0,0,0,-0.27695440160179,0,0,0,0.0520171231088703,0.252715369760564,0,0,-0.318388325411471,0,0.0992996343285653,-0.0815818795468414,0,0.114804240421287,-0.365827815548195,-0.771705004735894,0,0,0.142069893051714,0,0,0.258236988480151,-0.0823702229656663,0,0.210806579035867,0,0,0.058029039552438,0,0,0.49754041697288,-0.214314512399756,0,0,0,0,0,0,0,0,0,0,0,-0.313908347516697,-0.0922240566585104,0.536430704498817,0,0,0,0,0,0,-0.0241060230789031,-0.392049675884372,0,0,0.0157495227957818,0,0,0,0,0,-0.471425939663242,0,0,0,0,0,-0.0969923612426051,0,0,0,0.116058079104876,-0.564807121153884,0,0,-0.277362132193514,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.123319086035448,-0.852851008182352,0,0,0,0,0,0,0,0.178190334321978,0,0,0,0,0.998300791060096,0,0,0,-0.104796384789156,0,-0.160318030086386,0,0,0.116058079104876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.338608895757644,0,0.308639230322744,-0.0568589461625992,0,0,0.163843122299442,0,0,0,0,0,0.058029039552438,-0.031340424028527,0,0,0,0,0,0,0,0,0,0.207551203618446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0599421396575468,0,0,0,0,0,0,0,-0.0979578962680575,0,0,0.988035627607416,0,0,0,0,0,0,-0.146435197059226,0.25479271870682,0.0461672381607834,0,0,0,0.00364346706998285,0,0,0.00650189127508838,0,-0.0667773874189013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.153323010348428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347404630859092,0.197719991706567,0.116058079104876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0800184682686384,0,0,0,1.05318540983132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116058079104876,0,0,0,0,0,0,0,-0.289370787845519,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0482220752390542,0,0.0316814468748486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.550504042515712,0,0,0,0,-0.0476371106609188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.253610608288505,0,0,-0.259999439170517,0,0,0,0,0,0,0,0,0,0,0,0,-0.0613201791501264,0,0,0,0,0,0,0,0,0,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| |||
|rna_box=129 | |rna_box=129 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 79: | ||
|rna_weight_ug=4.676 | |rna_weight_ug=4.676 | ||
|sample_age=64 | |sample_age=64 | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 92: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.1920023363572e-222!GO:0005737;cytoplasm;3.13193688570596e-184!GO:0043231;intracellular membrane-bound organelle;1.65518328585481e-147!GO:0043227;membrane-bound organelle;1.73729442871898e-147!GO:0043226;organelle;1.81576155646804e-139!GO:0043229;intracellular organelle;4.52155086263358e-139!GO:0044444;cytoplasmic part;2.87998449277965e-136!GO:0044422;organelle part;3.60288366055808e-88!GO:0044446;intracellular organelle part;2.40647982549256e-87!GO:0005739;mitochondrion;2.58681427782735e-78!GO:0005515;protein binding;1.46989427075794e-76!GO:0044237;cellular metabolic process;7.79212205683495e-66!GO:0044238;primary metabolic process;2.36223293886709e-63!GO:0032991;macromolecular complex;3.60629787081784e-62!GO:0043170;macromolecule metabolic process;1.42736046542512e-53!GO:0043233;organelle lumen;2.60362340624288e-53!GO:0031974;membrane-enclosed lumen;2.60362340624288e-53!GO:0044429;mitochondrial part;5.1760932095799e-53!GO:0031090;organelle membrane;3.55532942255876e-52!GO:0030529;ribonucleoprotein complex;3.01342611503201e-50!GO:0003723;RNA binding;1.7145706693301e-45!GO:0044428;nuclear part;4.69646282626899e-43!GO:0031967;organelle envelope;1.32150325970779e-42!GO:0031975;envelope;2.25418036641667e-42!GO:0016043;cellular component organization and biogenesis;9.96553954841244e-41!GO:0019538;protein metabolic process;1.6778417835681e-40!GO:0005634;nucleus;2.64768155813205e-40!GO:0033036;macromolecule localization;5.16269011644584e-39!GO:0015031;protein transport;2.58296977673777e-38!GO:0045184;establishment of protein localization;5.02632271691307e-37!GO:0008104;protein localization;2.24429450494027e-36!GO:0044260;cellular macromolecule metabolic process;7.47805033771818e-36!GO:0005740;mitochondrial envelope;1.066783359386e-35!GO:0005829;cytosol;7.21684545418298e-35!GO:0031966;mitochondrial membrane;1.0534029395532e-34!GO:0044267;cellular protein metabolic process;1.61012753126088e-34!GO:0006412;translation;3.58875130401832e-34!GO:0009058;biosynthetic process;2.12781481343519e-33!GO:0043234;protein complex;1.26023034128127e-32!GO:0044249;cellular biosynthetic process;1.22816657970772e-31!GO:0005840;ribosome;6.19145596934272e-31!GO:0046907;intracellular transport;7.90906443180566e-31!GO:0019866;organelle inner membrane;2.43395740890522e-30!GO:0005743;mitochondrial inner membrane;8.03972330672054e-30!GO:0006886;intracellular protein transport;3.55219532181796e-28!GO:0009059;macromolecule biosynthetic process;4.36805686374695e-28!GO:0031981;nuclear lumen;2.14287065060819e-27!GO:0006396;RNA processing;1.45635322590818e-25!GO:0043283;biopolymer metabolic process;1.56807079632444e-25!GO:0003735;structural constituent of ribosome;1.72069781251473e-25!GO:0016071;mRNA metabolic process;6.11099464810434e-25!GO:0033279;ribosomal subunit;1.41711030105609e-23!GO:0010467;gene expression;1.82225070450676e-23!GO:0008380;RNA splicing;2.47987801486423e-23!GO:0065003;macromolecular complex assembly;2.17512560399248e-22!GO:0006119;oxidative phosphorylation;1.82384948258351e-21!GO:0031980;mitochondrial lumen;2.10943475377408e-21!GO:0005759;mitochondrial matrix;2.10943475377408e-21!GO:0044455;mitochondrial membrane part;2.21067239342817e-21!GO:0051641;cellular localization;5.7933519310608e-20!GO:0006397;mRNA processing;6.50857371303671e-20!GO:0051649;establishment of cellular localization;8.79997146409627e-20!GO:0022607;cellular component assembly;1.05584214971164e-19!GO:0022613;ribonucleoprotein complex biogenesis and assembly;4.57396117255417e-19!GO:0005783;endoplasmic reticulum;4.6842072909984e-19!GO:0051186;cofactor metabolic process;1.0950325099689e-18!GO:0012505;endomembrane system;3.20926679479733e-18!GO:0005746;mitochondrial respiratory chain;3.2297507544315e-18!GO:0005654;nucleoplasm;1.94417585354546e-17!GO:0044248;cellular catabolic process;4.49280578719652e-17!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;5.64665918542989e-17!GO:0016192;vesicle-mediated transport;8.1348876009271e-17!GO:0000166;nucleotide binding;2.0795657442769e-16!GO:0043285;biopolymer catabolic process;3.25669808232355e-16!GO:0008134;transcription factor binding;3.3127791217667e-16!GO:0044265;cellular macromolecule catabolic process;4.60298429149518e-16!GO:0016874;ligase activity;4.85706330178195e-16!GO:0005830;cytosolic ribosome (sensu Eukaryota);5.10423197680006e-16!GO:0022618;protein-RNA complex assembly;8.00746834167572e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;9.64857341819859e-16!GO:0051603;proteolysis involved in cellular protein catabolic process;9.8227149602309e-16!GO:0006996;organelle organization and biogenesis;1.52258976978729e-15!GO:0006512;ubiquitin cycle;1.75755777794284e-15!GO:0006511;ubiquitin-dependent protein catabolic process;1.80286404410275e-15!GO:0044451;nucleoplasm part;1.84133732364672e-15!GO:0044257;cellular protein catabolic process;2.13991780609707e-15!GO:0019941;modification-dependent protein catabolic process;2.35183601333357e-15!GO:0043632;modification-dependent macromolecule catabolic process;2.35183601333357e-15!GO:0005681;spliceosome;2.59496244673446e-15!GO:0006605;protein targeting;3.19412031172447e-15!GO:0006732;coenzyme metabolic process;7.06896515243517e-15!GO:0009057;macromolecule catabolic process;7.72440209947846e-15!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.15135849154508e-14!GO:0050136;NADH dehydrogenase (quinone) activity;1.17279802181362e-14!GO:0003954;NADH dehydrogenase activity;1.17279802181362e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.17279802181362e-14!GO:0006091;generation of precursor metabolites and energy;1.419436171491e-14!GO:0016817;hydrolase activity, acting on acid anhydrides;1.48922168176693e-14!GO:0016462;pyrophosphatase activity;2.21939313361672e-14!GO:0030163;protein catabolic process;2.31113028664072e-14!GO:0005794;Golgi apparatus;2.48843840804307e-14!GO:0048770;pigment granule;4.44576781624069e-14!GO:0042470;melanosome;4.44576781624069e-14!GO:0012501;programmed cell death;5.08030318188024e-14!GO:0008135;translation factor activity, nucleic acid binding;9.62393554992708e-14!GO:0006915;apoptosis;1.04041160335282e-13!GO:0044432;endoplasmic reticulum part;1.29792628061311e-13!GO:0044445;cytosolic part;1.30670849081315e-13!GO:0009055;electron carrier activity;1.5931667122721e-13!GO:0042775;organelle ATP synthesis coupled electron transport;1.63829663120843e-13!GO:0042773;ATP synthesis coupled electron transport;1.63829663120843e-13!GO:0006457;protein folding;1.76860246571221e-13!GO:0008219;cell death;1.9139945229316e-13!GO:0016265;death;1.9139945229316e-13!GO:0048523;negative regulation of cellular process;2.25375207029812e-13!GO:0017111;nucleoside-triphosphatase activity;2.37535958765157e-13!GO:0030964;NADH dehydrogenase complex (quinone);2.52782620172686e-13!GO:0045271;respiratory chain complex I;2.52782620172686e-13!GO:0005747;mitochondrial respiratory chain complex I;2.52782620172686e-13!GO:0016491;oxidoreductase activity;3.97176892367817e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;5.59565706609228e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;7.01418208128124e-13!GO:0015935;small ribosomal subunit;7.74618708258152e-13!GO:0000502;proteasome complex (sensu Eukaryota);9.63112807629531e-13!GO:0009056;catabolic process;3.26571426465737e-12!GO:0043412;biopolymer modification;6.32248451380536e-12!GO:0015934;large ribosomal subunit;8.76769747484782e-12!GO:0048519;negative regulation of biological process;9.32480625450229e-12!GO:0006413;translational initiation;1.57524831943923e-11!GO:0048193;Golgi vesicle transport;1.65056751613151e-11!GO:0051082;unfolded protein binding;2.13138522340575e-11!GO:0017076;purine nucleotide binding;3.71194959911054e-11!GO:0006446;regulation of translational initiation;5.85896911232437e-11!GO:0006464;protein modification process;7.87946852595923e-11!GO:0005730;nucleolus;8.55263016700917e-11!GO:0005761;mitochondrial ribosome;1.08863493224901e-10!GO:0000313;organellar ribosome;1.08863493224901e-10!GO:0003743;translation initiation factor activity;1.22741913867445e-10!GO:0015980;energy derivation by oxidation of organic compounds;1.35946124700849e-10!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.40977105544844e-10!GO:0009060;aerobic respiration;1.74497450177384e-10!GO:0043687;post-translational protein modification;1.82355827061828e-10!GO:0005789;endoplasmic reticulum membrane;1.82355827061828e-10!GO:0045333;cellular respiration;1.86563226113206e-10!GO:0006913;nucleocytoplasmic transport;1.9311062036466e-10!GO:0005768;endosome;2.4845080647355e-10!GO:0016604;nuclear body;3.32326661800265e-10!GO:0051169;nuclear transport;4.39998885791674e-10!GO:0006366;transcription from RNA polymerase II promoter;6.80398600274211e-10!GO:0006461;protein complex assembly;7.58866716990615e-10!GO:0016070;RNA metabolic process;7.83674603012322e-10!GO:0032553;ribonucleotide binding;9.00755765464164e-10!GO:0032555;purine ribonucleotide binding;9.00755765464164e-10!GO:0017038;protein import;1.14063423035498e-09!GO:0008565;protein transporter activity;1.19961758479462e-09!GO:0050794;regulation of cellular process;1.74974767417795e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.87625123654167e-09!GO:0003712;transcription cofactor activity;3.09477639554234e-09!GO:0005635;nuclear envelope;3.14461763365253e-09!GO:0016607;nuclear speck;4.07606278573542e-09!GO:0051187;cofactor catabolic process;5.29914798297597e-09!GO:0003676;nucleic acid binding;5.87582174465658e-09!GO:0006084;acetyl-CoA metabolic process;7.60345894440456e-09!GO:0043228;non-membrane-bound organelle;8.93431068789884e-09!GO:0043232;intracellular non-membrane-bound organelle;8.93431068789884e-09!GO:0006099;tricarboxylic acid cycle;8.95294193664416e-09!GO:0046356;acetyl-CoA catabolic process;8.95294193664416e-09!GO:0009109;coenzyme catabolic process;9.72053910502488e-09!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.26086554934103e-08!GO:0008639;small protein conjugating enzyme activity;1.45012726927182e-08!GO:0004842;ubiquitin-protein ligase activity;2.32604355973845e-08!GO:0050789;regulation of biological process;2.86836597020152e-08!GO:0043069;negative regulation of programmed cell death;2.99793456199666e-08!GO:0051246;regulation of protein metabolic process;3.20844854385575e-08!GO:0042981;regulation of apoptosis;3.49836167442896e-08!GO:0043067;regulation of programmed cell death;3.53800512758766e-08!GO:0006793;phosphorus metabolic process;4.49540668436022e-08!GO:0006796;phosphate metabolic process;4.49540668436022e-08!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);4.61199348016712e-08!GO:0031965;nuclear membrane;4.73759372261191e-08!GO:0019787;small conjugating protein ligase activity;4.75704909853523e-08!GO:0006082;organic acid metabolic process;4.90560669100644e-08!GO:0000398;nuclear mRNA splicing, via spliceosome;4.93807921690285e-08!GO:0000375;RNA splicing, via transesterification reactions;4.93807921690285e-08!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;4.93807921690285e-08!GO:0019752;carboxylic acid metabolic process;5.16218072267707e-08!GO:0051188;cofactor biosynthetic process;5.31772802088704e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;5.62664593224153e-08!GO:0043066;negative regulation of apoptosis;5.64068159979451e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;5.95252565871817e-08!GO:0005773;vacuole;6.0555807728819e-08!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;7.12093164286379e-08!GO:0016044;membrane organization and biogenesis;7.91922970903394e-08!GO:0003924;GTPase activity;8.4946796893839e-08!GO:0050662;coenzyme binding;1.27648118819736e-07!GO:0005741;mitochondrial outer membrane;1.52703417625859e-07!GO:0031968;organelle outer membrane;1.87426654295044e-07!GO:0015986;ATP synthesis coupled proton transport;2.27031886346088e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.27031886346088e-07!GO:0030554;adenyl nucleotide binding;2.29644444293606e-07!GO:0005793;ER-Golgi intermediate compartment;2.38622541731042e-07!GO:0016564;transcription repressor activity;2.62115916912376e-07!GO:0015078;hydrogen ion transmembrane transporter activity;2.71912845143729e-07!GO:0019867;outer membrane;3.10232127670021e-07!GO:0000323;lytic vacuole;3.39257314566877e-07!GO:0005764;lysosome;3.39257314566877e-07!GO:0019829;cation-transporting ATPase activity;3.78165783213803e-07!GO:0006259;DNA metabolic process;3.9224635697456e-07!GO:0007243;protein kinase cascade;4.85078715368546e-07!GO:0048475;coated membrane;5.25120501865547e-07!GO:0030117;membrane coat;5.25120501865547e-07!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;5.2748446080355e-07!GO:0016881;acid-amino acid ligase activity;5.4844061005902e-07!GO:0045786;negative regulation of progression through cell cycle;5.60655698398836e-07!GO:0006916;anti-apoptosis;6.16405183435112e-07!GO:0006606;protein import into nucleus;7.66576567669904e-07!GO:0051170;nuclear import;8.64813171527042e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;8.84431325005934e-07!GO:0044440;endosomal part;9.02005401544148e-07!GO:0010008;endosome membrane;9.02005401544148e-07!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.05873023529623e-06!GO:0008361;regulation of cell size;1.13024912192031e-06!GO:0008654;phospholipid biosynthetic process;1.15249759007078e-06!GO:0006163;purine nucleotide metabolic process;1.26455268654684e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.26455268654684e-06!GO:0005525;GTP binding;1.40694333471542e-06!GO:0007005;mitochondrion organization and biogenesis;1.62672141008248e-06!GO:0005770;late endosome;1.65875609438683e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.80681483991864e-06!GO:0009144;purine nucleoside triphosphate metabolic process;1.80681483991864e-06!GO:0009892;negative regulation of metabolic process;1.89536075594586e-06!GO:0032787;monocarboxylic acid metabolic process;1.90900203421672e-06!GO:0031324;negative regulation of cellular metabolic process;2.00363984345006e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.0206448208044e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.0206448208044e-06!GO:0044262;cellular carbohydrate metabolic process;2.36684058710887e-06!GO:0016049;cell growth;2.39291043973753e-06!GO:0009259;ribonucleotide metabolic process;2.700725645925e-06!GO:0009199;ribonucleoside triphosphate metabolic process;2.70820718035893e-06!GO:0009150;purine ribonucleotide metabolic process;2.95525543632658e-06!GO:0030036;actin cytoskeleton organization and biogenesis;3.05349080463067e-06!GO:0019899;enzyme binding;3.17264191034849e-06!GO:0032559;adenyl ribonucleotide binding;3.21559105785119e-06!GO:0009142;nucleoside triphosphate biosynthetic process;3.22366574282361e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;3.22366574282361e-06!GO:0009141;nucleoside triphosphate metabolic process;3.32894758512666e-06!GO:0031988;membrane-bound vesicle;3.59410040108293e-06!GO:0006950;response to stress;3.64075013641551e-06!GO:0009108;coenzyme biosynthetic process;3.64488054930191e-06!GO:0016310;phosphorylation;3.88244417450264e-06!GO:0044431;Golgi apparatus part;4.06868929263055e-06!GO:0006164;purine nucleotide biosynthetic process;4.13387767001008e-06!GO:0006888;ER to Golgi vesicle-mediated transport;4.187749392261e-06!GO:0006754;ATP biosynthetic process;4.61055667594488e-06!GO:0006753;nucleoside phosphate metabolic process;4.61055667594488e-06!GO:0031252;leading edge;4.79028451100791e-06!GO:0016023;cytoplasmic membrane-bound vesicle;5.04337486353995e-06!GO:0005524;ATP binding;5.04437401677633e-06!GO:0046034;ATP metabolic process;5.2699105839581e-06!GO:0044453;nuclear membrane part;5.5387877119164e-06!GO:0016887;ATPase activity;5.6153464882705e-06!GO:0048037;cofactor binding;6.2176340463973e-06!GO:0003714;transcription corepressor activity;6.30259855072866e-06!GO:0051726;regulation of cell cycle;6.79123110197843e-06!GO:0000074;regulation of progression through cell cycle;6.86870882833047e-06!GO:0031982;vesicle;7.39236198894247e-06!GO:0030120;vesicle coat;8.17125787765642e-06!GO:0030662;coated vesicle membrane;8.17125787765642e-06!GO:0009152;purine ribonucleotide biosynthetic process;9.60473163349247e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.0249850872924e-05!GO:0006118;electron transport;1.22058756482347e-05!GO:0045259;proton-transporting ATP synthase complex;1.22058756482347e-05!GO:0065002;intracellular protein transport across a membrane;1.22729269659814e-05!GO:0009260;ribonucleotide biosynthetic process;1.41198545552311e-05!GO:0031410;cytoplasmic vesicle;1.41631249782607e-05!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.47520316879273e-05!GO:0048522;positive regulation of cellular process;1.47520316879273e-05!GO:0007049;cell cycle;1.54061577190681e-05!GO:0065007;biological regulation;1.59061157310029e-05!GO:0051789;response to protein stimulus;1.60329864190185e-05!GO:0006986;response to unfolded protein;1.60329864190185e-05!GO:0032561;guanyl ribonucleotide binding;1.69880774005723e-05!GO:0019001;guanyl nucleotide binding;1.69880774005723e-05!GO:0008092;cytoskeletal protein binding;1.82960453891713e-05!GO:0042623;ATPase activity, coupled;1.89049296459587e-05!GO:0050657;nucleic acid transport;2.10612328122375e-05!GO:0051236;establishment of RNA localization;2.10612328122375e-05!GO:0050658;RNA transport;2.10612328122375e-05!GO:0005798;Golgi-associated vesicle;2.15277133060949e-05!GO:0006974;response to DNA damage stimulus;2.82485032077546e-05!GO:0007264;small GTPase mediated signal transduction;3.08564678290068e-05!GO:0006403;RNA localization;3.08564678290068e-05!GO:0000151;ubiquitin ligase complex;3.28026956069207e-05!GO:0044255;cellular lipid metabolic process;3.86292925247079e-05!GO:0001558;regulation of cell growth;4.18054837921531e-05!GO:0005643;nuclear pore;4.69007243610265e-05!GO:0006897;endocytosis;4.79660986562519e-05!GO:0010324;membrane invagination;4.79660986562519e-05!GO:0009719;response to endogenous stimulus;4.98948896215123e-05!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;5.08426328875271e-05!GO:0043566;structure-specific DNA binding;5.29438300726354e-05!GO:0032446;protein modification by small protein conjugation;5.53379583961696e-05!GO:0030029;actin filament-based process;5.61370480683852e-05!GO:0016567;protein ubiquitination;5.62789153247054e-05!GO:0005839;proteasome core complex (sensu Eukaryota);6.06017894721368e-05!GO:0042254;ribosome biogenesis and assembly;6.29639743846949e-05!GO:0006613;cotranslational protein targeting to membrane;6.75036270906077e-05!GO:0005769;early endosome;7.66948427935699e-05!GO:0016197;endosome transport;8.20894380682281e-05!GO:0006357;regulation of transcription from RNA polymerase II promoter;8.43838457910738e-05!GO:0051287;NAD binding;8.43838457910738e-05!GO:0016481;negative regulation of transcription;8.90432592108654e-05!GO:0046983;protein dimerization activity;9.19840898769887e-05!GO:0016787;hydrolase activity;0.000113761754295674!GO:0005777;peroxisome;0.000118510723404959!GO:0042579;microbody;0.000118510723404959!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.000120864195350481!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.000122577579115944!GO:0004812;aminoacyl-tRNA ligase activity;0.000122577579115944!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.000122577579115944!GO:0004386;helicase activity;0.000133559068145357!GO:0006752;group transfer coenzyme metabolic process;0.000137671170606522!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000142125011026471!GO:0003713;transcription coactivator activity;0.000143577568312375!GO:0006629;lipid metabolic process;0.000180682077205476!GO:0007242;intracellular signaling cascade;0.000180682077205476!GO:0043038;amino acid activation;0.000186584679361072!GO:0006418;tRNA aminoacylation for protein translation;0.000186584679361072!GO:0043039;tRNA aminoacylation;0.000186584679361072!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000194050708903983!GO:0000245;spliceosome assembly;0.000199138559630255!GO:0046930;pore complex;0.000215084244409433!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000218018757022287!GO:0000139;Golgi membrane;0.000222907240293313!GO:0006635;fatty acid beta-oxidation;0.000237726532971331!GO:0004298;threonine endopeptidase activity;0.000240263296031172!GO:0007265;Ras protein signal transduction;0.000243566976114587!GO:0006631;fatty acid metabolic process;0.000246323573646833!GO:0030133;transport vesicle;0.000246323573646833!GO:0048518;positive regulation of biological process;0.000256879361647096!GO:0009117;nucleotide metabolic process;0.000283942948918688!GO:0030867;rough endoplasmic reticulum membrane;0.000283942948918688!GO:0008026;ATP-dependent helicase activity;0.000284972991549008!GO:0005048;signal sequence binding;0.000289908709699034!GO:0051028;mRNA transport;0.000293795088652331!GO:0065009;regulation of a molecular function;0.000308157745599479!GO:0016563;transcription activator activity;0.000339714996149474!GO:0007050;cell cycle arrest;0.000343818945480307!GO:0005667;transcription factor complex;0.000344148401385938!GO:0048471;perinuclear region of cytoplasm;0.000394147838339977!GO:0006006;glucose metabolic process;0.000394147838339977!GO:0008610;lipid biosynthetic process;0.000409775214384001!GO:0042802;identical protein binding;0.000411492572935245!GO:0048468;cell development;0.000413161939867003!GO:0005791;rough endoplasmic reticulum;0.000414525191026511!GO:0040008;regulation of growth;0.00044599098121332!GO:0005762;mitochondrial large ribosomal subunit;0.000452046124493669!GO:0000315;organellar large ribosomal subunit;0.000452046124493669!GO:0019318;hexose metabolic process;0.000475869839254738!GO:0003697;single-stranded DNA binding;0.000511965274883616!GO:0005905;coated pit;0.000538830946965993!GO:0006979;response to oxidative stress;0.000538885877099303!GO:0009966;regulation of signal transduction;0.000597949936539475!GO:0005788;endoplasmic reticulum lumen;0.000619974767508374!GO:0003724;RNA helicase activity;0.000632576274947286!GO:0046474;glycerophospholipid biosynthetic process;0.000703000284392502!GO:0051427;hormone receptor binding;0.000777135554571449!GO:0043021;ribonucleoprotein binding;0.000797864575353839!GO:0005996;monosaccharide metabolic process;0.000823017399161137!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000873608142982192!GO:0030532;small nuclear ribonucleoprotein complex;0.000873608142982192!GO:0001726;ruffle;0.00090232060435807!GO:0044438;microbody part;0.000905954937938676!GO:0044439;peroxisomal part;0.000905954937938676!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000931985298162442!GO:0008286;insulin receptor signaling pathway;0.000948705769181989!GO:0006399;tRNA metabolic process;0.000953170777665938!GO:0051540;metal cluster binding;0.00100800401297454!GO:0051536;iron-sulfur cluster binding;0.00100800401297454!GO:0016740;transferase activity;0.00101282757297129!GO:0046467;membrane lipid biosynthetic process;0.00101512623236439!GO:0022890;inorganic cation transmembrane transporter activity;0.00109353615204034!GO:0006417;regulation of translation;0.0011503526529793!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00117373401464511!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.00123721520074874!GO:0006402;mRNA catabolic process;0.00139414095776996!GO:0031902;late endosome membrane;0.00141901660968726!GO:0035257;nuclear hormone receptor binding;0.00143585235498207!GO:0045892;negative regulation of transcription, DNA-dependent;0.0014452790877013!GO:0000314;organellar small ribosomal subunit;0.00147778782610368!GO:0005763;mitochondrial small ribosomal subunit;0.00147778782610368!GO:0016568;chromatin modification;0.00151623677236531!GO:0006066;alcohol metabolic process;0.00154844708331133!GO:0051920;peroxiredoxin activity;0.00167775862703746!GO:0006281;DNA repair;0.00171575668287991!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00174648305636269!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00174648305636269!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00174648305636269!GO:0031903;microbody membrane;0.00174703395144851!GO:0005778;peroxisomal membrane;0.00174703395144851!GO:0019222;regulation of metabolic process;0.00175866669673792!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00175866669673792!GO:0015002;heme-copper terminal oxidase activity;0.00175866669673792!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00175866669673792!GO:0004129;cytochrome-c oxidase activity;0.00175866669673792!GO:0007006;mitochondrial membrane organization and biogenesis;0.00179223435504946!GO:0009889;regulation of biosynthetic process;0.0018790648133476!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00189334368225975!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00196123118873657!GO:0043623;cellular protein complex assembly;0.0019841542583113!GO:0017091;AU-rich element binding;0.00201136565624005!GO:0050779;RNA destabilization;0.00201136565624005!GO:0000289;poly(A) tail shortening;0.00201136565624005!GO:0003690;double-stranded DNA binding;0.00202474591258981!GO:0009967;positive regulation of signal transduction;0.00211450409229093!GO:0030865;cortical cytoskeleton organization and biogenesis;0.00226150483913034!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00249392070160015!GO:0015399;primary active transmembrane transporter activity;0.00249392070160015!GO:0051098;regulation of binding;0.00257414791894501!GO:0043681;protein import into mitochondrion;0.00268866111781312!GO:0022402;cell cycle process;0.00272035495528907!GO:0051087;chaperone binding;0.0029052234103163!GO:0006364;rRNA processing;0.00290839544820934!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00291783674243062!GO:0046489;phosphoinositide biosynthetic process;0.00299156808155666!GO:0006325;establishment and/or maintenance of chromatin architecture;0.00309065626850658!GO:0051539;4 iron, 4 sulfur cluster binding;0.00313181489602149!GO:0006612;protein targeting to membrane;0.00318835267647552!GO:0007010;cytoskeleton organization and biogenesis;0.00328299468471926!GO:0030118;clathrin coat;0.00330765780674438!GO:0051128;regulation of cellular component organization and biogenesis;0.00341265431213802!GO:0016853;isomerase activity;0.00341265431213802!GO:0031901;early endosome membrane;0.00341265431213802!GO:0016859;cis-trans isomerase activity;0.00341429998711493!GO:0004860;protein kinase inhibitor activity;0.00341429998711493!GO:0006650;glycerophospholipid metabolic process;0.00341863412091975!GO:0006839;mitochondrial transport;0.00346172732528971!GO:0031326;regulation of cellular biosynthetic process;0.0035401011337416!GO:0031406;carboxylic acid binding;0.00355290873964579!GO:0030663;COPI coated vesicle membrane;0.00358279852931099!GO:0030126;COPI vesicle coat;0.00358279852931099!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00359324570451323!GO:0045454;cell redox homeostasis;0.00386800499229025!GO:0030132;clathrin coat of coated pit;0.00393821284899515!GO:0005774;vacuolar membrane;0.00401717890033508!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.00402633902695693!GO:0005083;small GTPase regulator activity;0.00402955309130527!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00406491429825317!GO:0033673;negative regulation of kinase activity;0.00421361796526264!GO:0006469;negative regulation of protein kinase activity;0.00421361796526264!GO:0030518;steroid hormone receptor signaling pathway;0.00441327370692307!GO:0032507;maintenance of cellular protein localization;0.00463687159089241!GO:0046483;heterocycle metabolic process;0.00463790681629737!GO:0005885;Arp2/3 protein complex;0.00531253116323231!GO:0016885;ligase activity, forming carbon-carbon bonds;0.00537648368286369!GO:0050790;regulation of catalytic activity;0.00551823415950598!GO:0019395;fatty acid oxidation;0.00565248405606344!GO:0016072;rRNA metabolic process;0.00607311952558513!GO:0006891;intra-Golgi vesicle-mediated transport;0.00610836116123477!GO:0004300;enoyl-CoA hydratase activity;0.00612887858872877!GO:0031072;heat shock protein binding;0.00632415312268322!GO:0009165;nucleotide biosynthetic process;0.00643541464620382!GO:0003746;translation elongation factor activity;0.0064426704312704!GO:0006323;DNA packaging;0.00663513891265739!GO:0022415;viral reproductive process;0.00665997132576924!GO:0003729;mRNA binding;0.00669154474701528!GO:0003857;3-hydroxyacyl-CoA dehydrogenase activity;0.00675194321747097!GO:0008186;RNA-dependent ATPase activity;0.00695362301459715!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0070139154209214!GO:0016614;oxidoreductase activity, acting on CH-OH group of donors;0.00717374419326521!GO:0051168;nuclear export;0.00727708592974313!GO:0030866;cortical actin cytoskeleton organization and biogenesis;0.00737407660224682!GO:0005765;lysosomal membrane;0.00746132955746237!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.00760689291409952!GO:0003779;actin binding;0.00785282866007935!GO:0030137;COPI-coated vesicle;0.00785282866007935!GO:0005975;carbohydrate metabolic process;0.00788837528192966!GO:0048154;S100 beta binding;0.00800306899638526!GO:0045941;positive regulation of transcription;0.00800306899638526!GO:0016779;nucleotidyltransferase activity;0.00800306899638526!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.00816256890923346!GO:0015992;proton transport;0.00828387393116653!GO:0048500;signal recognition particle;0.00831225985265974!GO:0006818;hydrogen transport;0.00837701622966648!GO:0051348;negative regulation of transferase activity;0.00845839692069253!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00852852540102031!GO:0048487;beta-tubulin binding;0.00863331625448178!GO:0045893;positive regulation of transcription, DNA-dependent;0.00869809078323834!GO:0005813;centrosome;0.00875047627247412!GO:0003995;acyl-CoA dehydrogenase activity;0.00878611224739659!GO:0033116;ER-Golgi intermediate compartment membrane;0.00900172405755498!GO:0008287;protein serine/threonine phosphatase complex;0.00904376672988749!GO:0045185;maintenance of protein localization;0.00920389602228086!GO:0008047;enzyme activator activity;0.00934745616854358!GO:0019843;rRNA binding;0.00943171077800926!GO:0043492;ATPase activity, coupled to movement of substances;0.00954253094251253!GO:0008139;nuclear localization sequence binding;0.00954253094251253!GO:0043488;regulation of mRNA stability;0.00954253094251253!GO:0043487;regulation of RNA stability;0.00954253094251253!GO:0006644;phospholipid metabolic process;0.00966652662120644!GO:0006778;porphyrin metabolic process;0.0097458987467299!GO:0033013;tetrapyrrole metabolic process;0.0097458987467299!GO:0003711;transcription elongation regulator activity;0.0100123038726474!GO:0051101;regulation of DNA binding;0.010225399266583!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.0106639404897112!GO:0050811;GABA receptor binding;0.0109019315395672!GO:0000096;sulfur amino acid metabolic process;0.0109817555338485!GO:0044437;vacuolar part;0.01099061638849!GO:0007266;Rho protein signal transduction;0.0110556695755581!GO:0007034;vacuolar transport;0.0112881422947044!GO:0004722;protein serine/threonine phosphatase activity;0.0112881422947044!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0112881422947044!GO:0051651;maintenance of cellular localization;0.0113549857719039!GO:0016791;phosphoric monoester hydrolase activity;0.0115228735187625!GO:0030027;lamellipodium;0.0118491271529474!GO:0009081;branched chain family amino acid metabolic process;0.0118957419981282!GO:0019210;kinase inhibitor activity;0.0120607639871665!GO:0030145;manganese ion binding;0.0121781494338794!GO:0006607;NLS-bearing substrate import into nucleus;0.0123306656545139!GO:0008250;oligosaccharyl transferase complex;0.0126245497001254!GO:0030384;phosphoinositide metabolic process;0.0128712581107866!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0134962528128453!GO:0006749;glutathione metabolic process;0.0135725255431959!GO:0004576;oligosaccharyl transferase activity;0.0140725943579473!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0140725943579473!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0140725943579473!GO:0000902;cell morphogenesis;0.0141741426308142!GO:0032989;cellular structure morphogenesis;0.0141741426308142!GO:0016126;sterol biosynthetic process;0.0142052956964198!GO:0006767;water-soluble vitamin metabolic process;0.0142650368984628!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0142988061518141!GO:0045792;negative regulation of cell size;0.0147672800649036!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0149668142404916!GO:0006401;RNA catabolic process;0.0149874257602878!GO:0015631;tubulin binding;0.0151335087179464!GO:0030522;intracellular receptor-mediated signaling pathway;0.0153014249090868!GO:0016408;C-acyltransferase activity;0.0156251738806462!GO:0004004;ATP-dependent RNA helicase activity;0.0159872711872443!GO:0016421;CoA carboxylase activity;0.0160204778827!GO:0008154;actin polymerization and/or depolymerization;0.016045402546151!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.016045402546151!GO:0007030;Golgi organization and biogenesis;0.0162701071124847!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0164998153835258!GO:0045047;protein targeting to ER;0.0164998153835258!GO:0004680;casein kinase activity;0.0165771368961185!GO:0006626;protein targeting to mitochondrion;0.0165771368961185!GO:0008234;cysteine-type peptidase activity;0.0165884373337404!GO:0030659;cytoplasmic vesicle membrane;0.0166050349833865!GO:0030041;actin filament polymerization;0.0167227999101845!GO:0019783;small conjugating protein-specific protease activity;0.0167227999101845!GO:0006643;membrane lipid metabolic process;0.0168945726821197!GO:0030308;negative regulation of cell growth;0.0168969880074607!GO:0005815;microtubule organizing center;0.0172295731575327!GO:0005159;insulin-like growth factor receptor binding;0.0172295731575327!GO:0030695;GTPase regulator activity;0.0179276259645767!GO:0005869;dynactin complex;0.0188416045981282!GO:0007179;transforming growth factor beta receptor signaling pathway;0.0192954352725721!GO:0006984;ER-nuclear signaling pathway;0.0195920456022279!GO:0005096;GTPase activator activity;0.020000634069393!GO:0046822;regulation of nucleocytoplasmic transport;0.0201478035630323!GO:0012506;vesicle membrane;0.0202328563619639!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0202856283577351!GO:0035258;steroid hormone receptor binding;0.0204727915172577!GO:0030119;AP-type membrane coat adaptor complex;0.0209830455415092!GO:0007041;lysosomal transport;0.0211891873872297!GO:0043065;positive regulation of apoptosis;0.0211891873872297!GO:0030134;ER to Golgi transport vesicle;0.0212808392322113!GO:0045045;secretory pathway;0.0213606030390144!GO:0042168;heme metabolic process;0.0217468322644928!GO:0016311;dephosphorylation;0.0219183488971289!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0221422250626396!GO:0004843;ubiquitin-specific protease activity;0.02238448589342!GO:0006497;protein amino acid lipidation;0.0228903844030495!GO:0005100;Rho GTPase activator activity;0.0229879486000368!GO:0004721;phosphoprotein phosphatase activity;0.0231409439711174!GO:0006260;DNA replication;0.0231409439711174!GO:0006007;glucose catabolic process;0.0234743825657977!GO:0042158;lipoprotein biosynthetic process;0.0234743825657977!GO:0008383;manganese superoxide dismutase activity;0.0234743825657977!GO:0001315;age-dependent response to reactive oxygen species;0.0234743825657977!GO:0030503;regulation of cell redox homeostasis;0.0234743825657977!GO:0043284;biopolymer biosynthetic process;0.0236593867160363!GO:0030742;GTP-dependent protein binding;0.0238703345451461!GO:0009374;biotin binding;0.024194104660676!GO:0035035;histone acetyltransferase binding;0.0242102129372368!GO:0016125;sterol metabolic process;0.0242299916031121!GO:0045947;negative regulation of translational initiation;0.0242302194642847!GO:0006740;NADPH regeneration;0.0244354414704985!GO:0006098;pentose-phosphate shunt;0.0244354414704985!GO:0001666;response to hypoxia;0.0245350518287768!GO:0005099;Ras GTPase activator activity;0.0249226479636781!GO:0016903;oxidoreductase activity, acting on the aldehyde or oxo group of donors;0.0249516124075469!GO:0009083;branched chain family amino acid catabolic process;0.0251766103198814!GO:0043068;positive regulation of programmed cell death;0.0252083716584663!GO:0006779;porphyrin biosynthetic process;0.0262709277531379!GO:0033014;tetrapyrrole biosynthetic process;0.0262709277531379!GO:0017166;vinculin binding;0.0271479425397531!GO:0008312;7S RNA binding;0.0279484351343935!GO:0003817;complement factor D activity;0.0280182329226346!GO:0030131;clathrin adaptor complex;0.0280182329226346!GO:0004029;aldehyde dehydrogenase (NAD) activity;0.0282535207938206!GO:0022411;cellular component disassembly;0.0290561327390448!GO:0006414;translational elongation;0.0290709248410123!GO:0030127;COPII vesicle coat;0.0293019770447926!GO:0012507;ER to Golgi transport vesicle membrane;0.0293019770447926!GO:0050660;FAD binding;0.0296019544130725!GO:0030140;trans-Golgi network transport vesicle;0.0301111962547575!GO:0045926;negative regulation of growth;0.0301758798206265!GO:0016790;thiolester hydrolase activity;0.0305253154160534!GO:0001725;stress fiber;0.0305253154160534!GO:0032432;actin filament bundle;0.0305253154160534!GO:0019079;viral genome replication;0.0308729865425093!GO:0009893;positive regulation of metabolic process;0.0309353090159258!GO:0032940;secretion by cell;0.0310063955989048!GO:0051235;maintenance of localization;0.0311847349492466!GO:0047115;trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity;0.0311847349492466!GO:0000209;protein polyubiquitination;0.0314345511189394!GO:0043204;perikaryon;0.031517294168586!GO:0008632;apoptotic program;0.0317717976208989!GO:0015036;disulfide oxidoreductase activity;0.0318292432730258!GO:0015630;microtubule cytoskeleton;0.0318292432730258!GO:0051336;regulation of hydrolase activity;0.03240482540045!GO:0030658;transport vesicle membrane;0.0325944131534331!GO:0051252;regulation of RNA metabolic process;0.0326244749294897!GO:0043407;negative regulation of MAP kinase activity;0.0326244749294897!GO:0004448;isocitrate dehydrogenase activity;0.0334303995393889!GO:0032984;macromolecular complex disassembly;0.0334303995393889!GO:0008180;signalosome;0.0345906356494979!GO:0006611;protein export from nucleus;0.0349541244887394!GO:0030176;integral to endoplasmic reticulum membrane;0.0351844449918827!GO:0004221;ubiquitin thiolesterase activity;0.035292586581238!GO:0033559;unsaturated fatty acid metabolic process;0.0353275680465759!GO:0006636;unsaturated fatty acid biosynthetic process;0.0353275680465759!GO:0051276;chromosome organization and biogenesis;0.0358589005328136!GO:0044433;cytoplasmic vesicle part;0.0359066733719733!GO:0045637;regulation of myeloid cell differentiation;0.0359066733719733!GO:0031625;ubiquitin protein ligase binding;0.0370640971252474!GO:0006506;GPI anchor biosynthetic process;0.0372751352491248!GO:0006376;mRNA splice site selection;0.0374859839686867!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0374859839686867!GO:0006354;RNA elongation;0.0375424056901552!GO:0031529;ruffle organization and biogenesis;0.0387694007691672!GO:0043022;ribosome binding;0.0387694007691672!GO:0003899;DNA-directed RNA polymerase activity;0.0391681463951458!GO:0006892;post-Golgi vesicle-mediated transport;0.0399247416843632!GO:0030139;endocytic vesicle;0.0399586784361345!GO:0004674;protein serine/threonine kinase activity;0.040782886605655!GO:0004313;[acyl-carrier-protein] S-acetyltransferase activity;0.0414401365951309!GO:0019171;3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity;0.0414401365951309!GO:0042587;glycogen granule;0.0414401365951309!GO:0004319;enoyl-[acyl-carrier-protein] reductase (NADPH, B-specific) activity;0.0414401365951309!GO:0016631;enoyl-[acyl-carrier-protein] reductase activity;0.0414401365951309!GO:0004317;3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity;0.0414401365951309!GO:0004316;3-oxoacyl-[acyl-carrier-protein] reductase activity;0.0414401365951309!GO:0006352;transcription initiation;0.0417001392524959!GO:0006695;cholesterol biosynthetic process;0.041701640689747!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0442442197979414!GO:0030521;androgen receptor signaling pathway;0.0445279146485954!GO:0065004;protein-DNA complex assembly;0.0456622328000243!GO:0051338;regulation of transferase activity;0.0457326391541519!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0459594688228401!GO:0010257;NADH dehydrogenase complex assembly;0.0459594688228401!GO:0033108;mitochondrial respiratory chain complex assembly;0.0459594688228401!GO:0008203;cholesterol metabolic process;0.0469437661750421!GO:0019058;viral infectious cycle;0.0471047335237149!GO:0016721;oxidoreductase activity, acting on superoxide radicals as acceptor;0.0471047335237149!GO:0004784;superoxide dismutase activity;0.0471047335237149!GO:0006505;GPI anchor metabolic process;0.0471047335237149!GO:0030100;regulation of endocytosis;0.0474548465058044!GO:0030911;TPR domain binding;0.0475168827719578!GO:0030235;nitric-oxide synthase regulator activity;0.047567981051387!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0480239319756227!GO:0009615;response to virus;0.0481585091724666!GO:0046209;nitric oxide metabolic process;0.0486398430836645!GO:0006809;nitric oxide biosynthetic process;0.0486398430836645!GO:0006739;NADP metabolic process;0.0488178948161976!GO:0018196;peptidyl-asparagine modification;0.0496090936892524!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0496090936892524!GO:0004177;aminopeptidase activity;0.0499028119557193 | |||
|sample_id=12233 | |sample_id=12233 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 100: | ||
|sample_tissue=adipose tissue | |sample_tissue=adipose tissue | ||
|top_motifs=STAT2,4,6:3.2585286379;AR:2.88351654454;RXR{A,B,G}_{NR1H2,PPAR}dimers:2.74350460994;ATF6:2.57311440402;ESRRA:2.44726669697;HBP1_HMGB_SSRP1_UBTF:2.40113841093;PDX1:2.26318420558;NFATC1..3:2.23665925019;RORA:2.23467480431;XBP1:2.20864274118;NFIL3:2.13094120909;STAT1,3:2.07639441405;FOXO1,3,4:1.88642901912;FOX{D1,D2}:1.8737798122;TFCP2:1.83956214024;ATF2:1.62037519435;NFE2L1:1.59708087817;TGIF1:1.58100939713;ZNF238:1.57302286227;GCM1,2:1.53821561658;IKZF1:1.48563195108;EP300:1.45102628016;DBP:1.43365743342;NFIX:1.42646837362;FOXL1:1.36047742776;SP1:1.35871330386;HNF4A_NR2F1,2:1.34887260461;SOX5:1.33788012605;TLX1..3_NFIC{dimer}:1.33697356397;MTF1:1.33214133625;ARID5B:1.28388502181;TBP:1.26659330975;HOXA9_MEIS1:1.2238205379;IKZF2:1.2172611897;MAZ:1.19891800149;MYBL2:1.13751752316;FOXN1:1.10703128457;TFAP2{A,C}:1.09941587526;MEF2{A,B,C,D}:1.09342807938;CEBPA,B_DDIT3:1.09255056922;PRRX1,2:1.0904745912;HLF:1.0875362069;FOXA2:1.08263269414;HMX1:1.07616488666;GZF1:1.05280145254;MAFB:1.05101990467;NR3C1:1.04409717102;SRF:1.03410665918;FOXP3:1.03076617222;TEAD1:0.999911559244;NFE2:0.997830267217;HIC1:0.977682191208;bHLH_family:0.964371086544;EBF1:0.865387501956;PAX6:0.860724019988;EGR1..3:0.843943586615;SPZ1:0.831646600337;MED-1{core}:0.824630161994;JUN:0.811668567836;TFAP2B:0.804804821717;NR1H4:0.796901828099;NFKB1_REL_RELA:0.729523789923;HSF1,2:0.717187242852;NKX3-2:0.71555108541;PATZ1:0.709598430345;ADNP_IRX_SIX_ZHX:0.704540060936;PAX5:0.679728047753;MYFfamily:0.669098481232;EN1,2:0.648033136807;ATF4:0.630334454954;HIF1A:0.621968389895;MTE{core}:0.61799916162;GTF2A1,2:0.613203525855;NHLH1,2:0.577422807623;NANOG:0.544914282317;IRF7:0.544605794307;RXR{A,B,G}:0.531134110591;RFX2..5_RFXANK_RFXAP:0.514589820706;GTF2I:0.496230980269;HOX{A5,B5}:0.495422694675;FOS_FOS{B,L1}_JUN{B,D}:0.490300934229;GFI1B:0.480314764987;SREBF1,2:0.443267139616;TLX2:0.381479373704;FOSL2:0.35728152607;CREB1:0.345675601333;ATF5_CREB3:0.321932309276;HOX{A4,D4}:0.293819701569;TFAP4:0.27856717959;NKX2-1,4:0.254215792993;DMAP1_NCOR{1,2}_SMARC:0.249719642479;BACH2:0.239699786965;FOXD3:0.2263222826;POU6F1:0.188821106369;CDC5L:0.177969623427;RBPJ:0.175620387812;HAND1,2:0.172103863581;MZF1:0.160948552475;BREu{core}:0.111634497715;NANOG{mouse}:0.110698968916;ZNF423:0.0999773304258;HNF1A:0.0821474457137;ZFP161:0.0813511446991;STAT5{A,B}:0.0645824971955;PAX2:0.0617508880757;PAX1,9:0.0231933020264;IRF1,2:0.0176146238061;FOX{F1,F2,J1}:0.00132016669149;ETS1,2:-0.00600957019373;LHX3,4:-0.00847419535164;ESR1:-0.048514275309;TBX4,5:-0.0540584288917;FOXP1:-0.0675079721375;SMAD1..7,9:-0.0830058353912;GATA4:-0.0858971309391;ZIC1..3:-0.0900343717821;SOX17:-0.101905650485;FOXQ1:-0.109265773408;NR6A1:-0.13274523916;PBX1:-0.142397330918;HMGA1,2:-0.163812275665;NFE2L2:-0.169381686621;NR5A1,2:-0.172099533266;TP53:-0.182758840976;GATA6:-0.190546223478;TEF:-0.20138785884;PAX8:-0.213754127823;FOX{I1,J2}:-0.226058061041;SPIB:-0.268957039268;NFY{A,B,C}:-0.284740997778;SPI1:-0.295124392524;ELF1,2,4:-0.317307419598;GLI1..3:-0.323234521776;NKX2-2,8:-0.329460744857;SOX2:-0.33195863964;ALX4:-0.351899039499;PRDM1:-0.382521813593;NKX2-3_NKX2-5:-0.387441149122;REST:-0.388411886914;RUNX1..3:-0.396696319948;ZNF148:-0.404809673941;ZNF143:-0.406417232698;ZNF384:-0.416291964692;RFX1:-0.416901613794;GFI1:-0.421118304436;BPTF:-0.433842391186;XCPE1{core}:-0.457426656001;KLF4:-0.528632211238;NKX6-1,2:-0.536407121454;NRF1:-0.56516797354;PAX3,7:-0.579922068034;ZBTB6:-0.61096486316;CUX2:-0.650284485583;RXRA_VDR{dimer}:-0.693618178084;PPARG:-0.694934436413;LEF1_TCF7_TCF7L1,2:-0.703752131237;OCT4_SOX2{dimer}:-0.728370853977;YY1:-0.751451236333;PAX4:-0.764075153343;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.765823067055;RREB1:-0.766318693374;AHR_ARNT_ARNT2:-0.784133085827;CRX:-0.792231730261;POU2F1..3:-0.859744669414;SOX{8,9,10}:-0.911400109704;PITX1..3:-0.917631894208;SNAI1..3:-0.920047156471;TAL1_TCF{3,4,12}:-0.921204387899;TFDP1:-0.937124685458;HOX{A6,A7,B6,B7}:-0.937283009387;UFEwm:-0.970006339302;ELK1,4_GABP{A,B1}:-0.986876962535;MYB:-1.00970162134;ZEB1:-1.0137128303;E2F1..5:-1.02268733736;LMO2:-1.04197530191;POU5F1:-1.08673520041;ALX1:-1.10148851789;CDX1,2,4:-1.11550665122;ONECUT1,2:-1.1708459876;HES1:-1.17349504452;T:-1.18420515806;POU3F1..4:-1.22070327946;AIRE:-1.26193200996;POU1F1:-1.31888341272;EVI1:-1.4304983882;VSX1,2:-1.59625487518;FOXM1:-1.74847189273;ZBTB16:-1.7838481828;MYOD1:-1.81235704396;TOPORS:-2.01483821396;NKX3-1:-2.2325325988 | |top_motifs=STAT2,4,6:3.2585286379;AR:2.88351654454;RXR{A,B,G}_{NR1H2,PPAR}dimers:2.74350460994;ATF6:2.57311440402;ESRRA:2.44726669697;HBP1_HMGB_SSRP1_UBTF:2.40113841093;PDX1:2.26318420558;NFATC1..3:2.23665925019;RORA:2.23467480431;XBP1:2.20864274118;NFIL3:2.13094120909;STAT1,3:2.07639441405;FOXO1,3,4:1.88642901912;FOX{D1,D2}:1.8737798122;TFCP2:1.83956214024;ATF2:1.62037519435;NFE2L1:1.59708087817;TGIF1:1.58100939713;ZNF238:1.57302286227;GCM1,2:1.53821561658;IKZF1:1.48563195108;EP300:1.45102628016;DBP:1.43365743342;NFIX:1.42646837362;FOXL1:1.36047742776;SP1:1.35871330386;HNF4A_NR2F1,2:1.34887260461;SOX5:1.33788012605;TLX1..3_NFIC{dimer}:1.33697356397;MTF1:1.33214133625;ARID5B:1.28388502181;TBP:1.26659330975;HOXA9_MEIS1:1.2238205379;IKZF2:1.2172611897;MAZ:1.19891800149;MYBL2:1.13751752316;FOXN1:1.10703128457;TFAP2{A,C}:1.09941587526;MEF2{A,B,C,D}:1.09342807938;CEBPA,B_DDIT3:1.09255056922;PRRX1,2:1.0904745912;HLF:1.0875362069;FOXA2:1.08263269414;HMX1:1.07616488666;GZF1:1.05280145254;MAFB:1.05101990467;NR3C1:1.04409717102;SRF:1.03410665918;FOXP3:1.03076617222;TEAD1:0.999911559244;NFE2:0.997830267217;HIC1:0.977682191208;bHLH_family:0.964371086544;EBF1:0.865387501956;PAX6:0.860724019988;EGR1..3:0.843943586615;SPZ1:0.831646600337;MED-1{core}:0.824630161994;JUN:0.811668567836;TFAP2B:0.804804821717;NR1H4:0.796901828099;NFKB1_REL_RELA:0.729523789923;HSF1,2:0.717187242852;NKX3-2:0.71555108541;PATZ1:0.709598430345;ADNP_IRX_SIX_ZHX:0.704540060936;PAX5:0.679728047753;MYFfamily:0.669098481232;EN1,2:0.648033136807;ATF4:0.630334454954;HIF1A:0.621968389895;MTE{core}:0.61799916162;GTF2A1,2:0.613203525855;NHLH1,2:0.577422807623;NANOG:0.544914282317;IRF7:0.544605794307;RXR{A,B,G}:0.531134110591;RFX2..5_RFXANK_RFXAP:0.514589820706;GTF2I:0.496230980269;HOX{A5,B5}:0.495422694675;FOS_FOS{B,L1}_JUN{B,D}:0.490300934229;GFI1B:0.480314764987;SREBF1,2:0.443267139616;TLX2:0.381479373704;FOSL2:0.35728152607;CREB1:0.345675601333;ATF5_CREB3:0.321932309276;HOX{A4,D4}:0.293819701569;TFAP4:0.27856717959;NKX2-1,4:0.254215792993;DMAP1_NCOR{1,2}_SMARC:0.249719642479;BACH2:0.239699786965;FOXD3:0.2263222826;POU6F1:0.188821106369;CDC5L:0.177969623427;RBPJ:0.175620387812;HAND1,2:0.172103863581;MZF1:0.160948552475;BREu{core}:0.111634497715;NANOG{mouse}:0.110698968916;ZNF423:0.0999773304258;HNF1A:0.0821474457137;ZFP161:0.0813511446991;STAT5{A,B}:0.0645824971955;PAX2:0.0617508880757;PAX1,9:0.0231933020264;IRF1,2:0.0176146238061;FOX{F1,F2,J1}:0.00132016669149;ETS1,2:-0.00600957019373;LHX3,4:-0.00847419535164;ESR1:-0.048514275309;TBX4,5:-0.0540584288917;FOXP1:-0.0675079721375;SMAD1..7,9:-0.0830058353912;GATA4:-0.0858971309391;ZIC1..3:-0.0900343717821;SOX17:-0.101905650485;FOXQ1:-0.109265773408;NR6A1:-0.13274523916;PBX1:-0.142397330918;HMGA1,2:-0.163812275665;NFE2L2:-0.169381686621;NR5A1,2:-0.172099533266;TP53:-0.182758840976;GATA6:-0.190546223478;TEF:-0.20138785884;PAX8:-0.213754127823;FOX{I1,J2}:-0.226058061041;SPIB:-0.268957039268;NFY{A,B,C}:-0.284740997778;SPI1:-0.295124392524;ELF1,2,4:-0.317307419598;GLI1..3:-0.323234521776;NKX2-2,8:-0.329460744857;SOX2:-0.33195863964;ALX4:-0.351899039499;PRDM1:-0.382521813593;NKX2-3_NKX2-5:-0.387441149122;REST:-0.388411886914;RUNX1..3:-0.396696319948;ZNF148:-0.404809673941;ZNF143:-0.406417232698;ZNF384:-0.416291964692;RFX1:-0.416901613794;GFI1:-0.421118304436;BPTF:-0.433842391186;XCPE1{core}:-0.457426656001;KLF4:-0.528632211238;NKX6-1,2:-0.536407121454;NRF1:-0.56516797354;PAX3,7:-0.579922068034;ZBTB6:-0.61096486316;CUX2:-0.650284485583;RXRA_VDR{dimer}:-0.693618178084;PPARG:-0.694934436413;LEF1_TCF7_TCF7L1,2:-0.703752131237;OCT4_SOX2{dimer}:-0.728370853977;YY1:-0.751451236333;PAX4:-0.764075153343;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.765823067055;RREB1:-0.766318693374;AHR_ARNT_ARNT2:-0.784133085827;CRX:-0.792231730261;POU2F1..3:-0.859744669414;SOX{8,9,10}:-0.911400109704;PITX1..3:-0.917631894208;SNAI1..3:-0.920047156471;TAL1_TCF{3,4,12}:-0.921204387899;TFDP1:-0.937124685458;HOX{A6,A7,B6,B7}:-0.937283009387;UFEwm:-0.970006339302;ELK1,4_GABP{A,B1}:-0.986876962535;MYB:-1.00970162134;ZEB1:-1.0137128303;E2F1..5:-1.02268733736;LMO2:-1.04197530191;POU5F1:-1.08673520041;ALX1:-1.10148851789;CDX1,2,4:-1.11550665122;ONECUT1,2:-1.1708459876;HES1:-1.17349504452;T:-1.18420515806;POU3F1..4:-1.22070327946;AIRE:-1.26193200996;POU1F1:-1.31888341272;EVI1:-1.4304983882;VSX1,2:-1.59625487518;FOXM1:-1.74847189273;ZBTB16:-1.7838481828;MYOD1:-1.81235704396;TOPORS:-2.01483821396;NKX3-1:-2.2325325988 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:12233-129G1;search_select_hide=table117:FF:12233-129G1 | |||
}} | }} | ||
Latest revision as of 18:35, 4 June 2020
| Name: | mature adipocyte, donor3 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12560 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12560
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12560
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.117 |
| 10 | 10 | 0.212 |
| 100 | 100 | 0.748 |
| 101 | 101 | 0.574 |
| 102 | 102 | 0.16 |
| 103 | 103 | 0.769 |
| 104 | 104 | 0.987 |
| 105 | 105 | 0.907 |
| 106 | 106 | 0.595 |
| 107 | 107 | 0.709 |
| 108 | 108 | 0.428 |
| 109 | 109 | 0.136 |
| 11 | 11 | 0.106 |
| 110 | 110 | 0.0913 |
| 111 | 111 | 0.0591 |
| 112 | 112 | 0.461 |
| 113 | 113 | 0.7 |
| 114 | 114 | 0.0166 |
| 115 | 115 | 0.738 |
| 116 | 116 | 0.107 |
| 117 | 117 | 0.00339 |
| 118 | 118 | 0.26 |
| 119 | 119 | 0.744 |
| 12 | 12 | 0.194 |
| 120 | 120 | 0.14 |
| 121 | 121 | 0.944 |
| 122 | 122 | 0.363 |
| 123 | 123 | 0.0202 |
| 124 | 124 | 0.371 |
| 125 | 125 | 0.142 |
| 126 | 126 | 0.733 |
| 127 | 127 | 0.161 |
| 128 | 128 | 0.937 |
| 129 | 129 | 0.59 |
| 13 | 13 | 0.652 |
| 130 | 130 | 0.281 |
| 131 | 131 | 0.385 |
| 132 | 132 | 0.458 |
| 133 | 133 | 0.172 |
| 134 | 134 | 0.499 |
| 135 | 135 | 0.649 |
| 136 | 136 | 0.399 |
| 137 | 137 | 0.765 |
| 138 | 138 | 0.117 |
| 139 | 139 | 0.823 |
| 14 | 14 | 0.851 |
| 140 | 140 | 4.61278e-4 |
| 141 | 141 | 0.416 |
| 142 | 142 | 0.93 |
| 143 | 143 | 0.0707 |
| 144 | 144 | 0.546 |
| 145 | 145 | 0.21 |
| 146 | 146 | 0.326 |
| 147 | 147 | 0.507 |
| 148 | 148 | 0.421 |
| 149 | 149 | 0.727 |
| 15 | 15 | 0.371 |
| 150 | 150 | 0.65 |
| 151 | 151 | 0.41 |
| 152 | 152 | 0.474 |
| 153 | 153 | 0.0391 |
| 154 | 154 | 0.232 |
| 155 | 155 | 0.171 |
| 156 | 156 | 0.452 |
| 157 | 157 | 0.519 |
| 158 | 158 | 0.517 |
| 159 | 159 | 0.207 |
| 16 | 16 | 0.166 |
| 160 | 160 | 0.394 |
| 161 | 161 | 0.313 |
| 162 | 162 | 0.63 |
| 163 | 163 | 0.986 |
| 164 | 164 | 0.239 |
| 165 | 165 | 0.429 |
| 166 | 166 | 0.894 |
| 167 | 167 | 0.576 |
| 168 | 168 | 0.985 |
| 169 | 169 | 0.408 |
| 17 | 17 | 0.54 |
| 18 | 18 | 0.202 |
| 19 | 19 | 0.776 |
| 2 | 2 | 0.892 |
| 20 | 20 | 0.844 |
| 21 | 21 | 0.212 |
| 22 | 22 | 0.696 |
| 23 | 23 | 0.349 |
| 24 | 24 | 0.615 |
| 25 | 25 | 0.739 |
| 26 | 26 | 0.0836 |
| 27 | 27 | 0.338 |
| 28 | 28 | 0.774 |
| 29 | 29 | 0.0302 |
| 3 | 3 | 0.18 |
| 30 | 30 | 0.49 |
| 31 | 31 | 0.809 |
| 32 | 32 | 2.81139e-4 |
| 33 | 33 | 0.942 |
| 34 | 34 | 0.766 |
| 35 | 35 | 0.17 |
| 36 | 36 | 0.305 |
| 37 | 37 | 0.447 |
| 38 | 38 | 0.663 |
| 39 | 39 | 0.0427 |
| 4 | 4 | 0.124 |
| 40 | 40 | 0.291 |
| 41 | 41 | 0.988 |
| 42 | 42 | 0.477 |
| 43 | 43 | 0.594 |
| 44 | 44 | 0.014 |
| 45 | 45 | 0.374 |
| 46 | 46 | 0.0449 |
| 47 | 47 | 0.0621 |
| 48 | 48 | 0.0599 |
| 49 | 49 | 0.116 |
| 5 | 5 | 0.218 |
| 50 | 50 | 0.822 |
| 51 | 51 | 0.594 |
| 52 | 52 | 0.272 |
| 53 | 53 | 0.805 |
| 54 | 54 | 0.849 |
| 55 | 55 | 0.176 |
| 56 | 56 | 0.274 |
| 57 | 57 | 0.211 |
| 58 | 58 | 0.67 |
| 59 | 59 | 0.325 |
| 6 | 6 | 0.506 |
| 60 | 60 | 0.502 |
| 61 | 61 | 0.13 |
| 62 | 62 | 0.414 |
| 63 | 63 | 0.626 |
| 64 | 64 | 0.0975 |
| 65 | 65 | 0.872 |
| 66 | 66 | 0.424 |
| 67 | 67 | 0.48 |
| 68 | 68 | 0.932 |
| 69 | 69 | 0.0018 |
| 7 | 7 | 0.554 |
| 70 | 70 | 0.0135 |
| 71 | 71 | 0.0683 |
| 72 | 72 | 0.47 |
| 73 | 73 | 0.749 |
| 74 | 74 | 0.613 |
| 75 | 75 | 0.0661 |
| 76 | 76 | 0.436 |
| 77 | 77 | 0.715 |
| 78 | 78 | 0.68 |
| 79 | 79 | 0.116 |
| 8 | 8 | 0.231 |
| 80 | 80 | 0.16 |
| 81 | 81 | 0.474 |
| 82 | 82 | 0.584 |
| 83 | 83 | 0.0256 |
| 84 | 84 | 0.734 |
| 85 | 85 | 0.92 |
| 86 | 86 | 0.534 |
| 87 | 87 | 0.38 |
| 88 | 88 | 0.581 |
| 89 | 89 | 0.427 |
| 9 | 9 | 0.403 |
| 90 | 90 | 0.968 |
| 91 | 91 | 0.853 |
| 92 | 92 | 0.733 |
| 93 | 93 | 0.475 |
| 94 | 94 | 0.214 |
| 95 | 95 | 0.159 |
| 96 | 96 | 0.598 |
| 97 | 97 | 0.308 |
| 98 | 98 | 0.33 |
| 99 | 99 | 0.494 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12560
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000266 human mature adipocyte sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000325 (stuff accumulating cell)
0000255 (eukaryotic cell)
0000136 (fat cell)
UBERON: Anatomy
0002384 (connective tissue)
0000479 (tissue)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0001062 (anatomical entity)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000266 (human mature adipocyte sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
