FF:11788-124B6: Difference between revisions

Latest revision as of 18:20, 4 June 2020

Name:	CD14+CD16- Monocytes, donor1
Species:	Human (Homo sapiens)
Library ID:	CNhs13224
Sample type:	primary cells
Genomic View:	UCSC
RefEX:	Specific genes
FANTOM CAT:	1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	blood
dev stage	NA
sex	male
age	25
cell type	monocyte
cell line	NA
company	NA
collaboration	Michael Rehli (University of Regensberg)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	5
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005516

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs13224		CAGE		DRX008165		DRR009037

Accession ID Hg19

Library id		BAM		CTSS
CNhs13224		DRZ000462		DRZ001847

Accession ID Hg38

Library id		BAM		CTSS
CNhs13224		DRZ011812		DRZ013197

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0.0462
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.13
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0.102
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.374
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0.088
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0.088
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0.154
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0.524
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0.194
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0.224
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0.088
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0.541
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.304
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.155
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0.511
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0.194
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0.303
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.00732
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0.194
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0.0462
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.0144
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0.025
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.619
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0.901
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0.41
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.526
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0.751
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.439
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0.278
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0.467
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0.327
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0.469
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.681
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0.387
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0.41
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0.999
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.156
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0.455
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0.873
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0.859
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0.494
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0.126
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0.119
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0.0462
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0.0462
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0.194
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0.224
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0.317
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs13224

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	5.77261e-11
MA0003.1	MA0003.1	0.0839
MA0004.1	MA0004.1	0.64
MA0006.1	MA0006.1	0.917
MA0007.1	MA0007.1	0.83
MA0009.1	MA0009.1	0.267
MA0014.1	MA0014.1	0.428
MA0017.1	MA0017.1	0.0166
MA0018.2	MA0018.2	0.0063
MA0019.1	MA0019.1	0.352
MA0024.1	MA0024.1	0.00219
MA0025.1	MA0025.1	2.27203e-5
MA0027.1	MA0027.1	0.811
MA0028.1	MA0028.1	0.713
MA0029.1	MA0029.1	0.123
MA0030.1	MA0030.1	0.494
MA0031.1	MA0031.1	0.922
MA0035.2	MA0035.2	0.376
MA0038.1	MA0038.1	0.0886
MA0039.2	MA0039.2	0.353
MA0040.1	MA0040.1	0.228
MA0041.1	MA0041.1	0.687
MA0042.1	MA0042.1	0.287
MA0043.1	MA0043.1	7.75407e-10
MA0046.1	MA0046.1	0.138
MA0047.2	MA0047.2	0.342
MA0048.1	MA0048.1	0.899
MA0050.1	MA0050.1	1.74909e-9
MA0051.1	MA0051.1	3.91358e-4
MA0052.1	MA0052.1	0.186
MA0055.1	MA0055.1	0.85
MA0057.1	MA0057.1	0.601
MA0058.1	MA0058.1	0.39
MA0059.1	MA0059.1	0.529
MA0060.1	MA0060.1	9.27611e-8
MA0061.1	MA0061.1	6.00009e-5
MA0062.2	MA0062.2	4.95424e-4
MA0065.2	MA0065.2	0.0187
MA0066.1	MA0066.1	0.0446
MA0067.1	MA0067.1	2.26708e-5
MA0068.1	MA0068.1	0.444
MA0069.1	MA0069.1	0.635
MA0070.1	MA0070.1	0.0188
MA0071.1	MA0071.1	0.148
MA0072.1	MA0072.1	0.984
MA0073.1	MA0073.1	0.385
MA0074.1	MA0074.1	0.348
MA0076.1	MA0076.1	0.933
MA0077.1	MA0077.1	0.101
MA0078.1	MA0078.1	0.67
MA0079.2	MA0079.2	0.718
MA0080.2	MA0080.2	4.79165e-16
MA0081.1	MA0081.1	1.07846e-4
MA0083.1	MA0083.1	0.453
MA0084.1	MA0084.1	0.444
MA0087.1	MA0087.1	0.327
MA0088.1	MA0088.1	0.718
MA0090.1	MA0090.1	0.0439
MA0091.1	MA0091.1	0.709
MA0092.1	MA0092.1	0.654
MA0093.1	MA0093.1	0.686
MA0099.2	MA0099.2	1.77072e-11
MA0100.1	MA0100.1	0.88
MA0101.1	MA0101.1	0.00118
MA0102.2	MA0102.2	8.47201e-15
MA0103.1	MA0103.1	0.24
MA0104.2	MA0104.2	0.504
MA0105.1	MA0105.1	3.15515e-7
MA0106.1	MA0106.1	0.414
MA0107.1	MA0107.1	3.5333e-4
MA0108.2	MA0108.2	2.19885e-6
MA0111.1	MA0111.1	0.495
MA0112.2	MA0112.2	2.52136e-4
MA0113.1	MA0113.1	0.93
MA0114.1	MA0114.1	0.161
MA0115.1	MA0115.1	0.893
MA0116.1	MA0116.1	1.43203e-4
MA0117.1	MA0117.1	0.054
MA0119.1	MA0119.1	0.425
MA0122.1	MA0122.1	0.845
MA0124.1	MA0124.1	0.373
MA0125.1	MA0125.1	0.206
MA0131.1	MA0131.1	0.933
MA0135.1	MA0135.1	0.273
MA0136.1	MA0136.1	9.59547e-19
MA0137.2	MA0137.2	0.431
MA0138.2	MA0138.2	0.859
MA0139.1	MA0139.1	0.85
MA0140.1	MA0140.1	0.319
MA0141.1	MA0141.1	0.0386
MA0142.1	MA0142.1	0.395
MA0143.1	MA0143.1	0.762
MA0144.1	MA0144.1	0.245
MA0145.1	MA0145.1	0.233
MA0146.1	MA0146.1	0.0359
MA0147.1	MA0147.1	0.629
MA0148.1	MA0148.1	0.955
MA0149.1	MA0149.1	0.08
MA0150.1	MA0150.1	1.926e-8
MA0152.1	MA0152.1	0.13
MA0153.1	MA0153.1	0.0215
MA0154.1	MA0154.1	0.00184
MA0155.1	MA0155.1	0.805
MA0156.1	MA0156.1	1.20202e-12
MA0157.1	MA0157.1	0.469
MA0159.1	MA0159.1	0.0342
MA0160.1	MA0160.1	0.00982
MA0162.1	MA0162.1	0.593
MA0163.1	MA0163.1	8.52518e-8
MA0164.1	MA0164.1	0.731
MA0258.1	MA0258.1	0.00669
MA0259.1	MA0259.1	0.848

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs13224

Novel motif	Logo	P-value
1	1	0.132
10	10	0.0179
100	100	0.943
101	101	0.516
102	102	0.614
103	103	0.284
104	104	0.674
105	105	0.157
106	106	0.00744
107	107	0.616
108	108	0.737
109	109	0.0695
11	11	0.153
110	110	0.305
111	111	0.0382
112	112	0.3
113	113	0.654
114	114	0.0138
115	115	0.14
116	116	0.856
117	117	0.028
118	118	0.0917
119	119	0.411
12	12	0.347
120	120	0.737
121	121	0.975
122	122	0.694
123	123	0.0388
124	124	0.875
125	125	0.215
126	126	0.176
127	127	0.256
128	128	0.0578
129	129	0.99
13	13	0.108
130	130	0.238
131	131	0.631
132	132	0.0263
133	133	0.676
134	134	0.568
135	135	0.137
136	136	0.801
137	137	1.19291e-4
138	138	0.121
139	139	0.0296
14	14	0.346
140	140	0.156
141	141	0.322
142	142	0.782
143	143	0.0398
144	144	0.724
145	145	0.798
146	146	0.691
147	147	0.347
148	148	0.0227
149	149	0.596
15	15	0.123
150	150	0.699
151	151	0.284
152	152	0.209
153	153	0.772
154	154	0.721
155	155	0.258
156	156	0.861
157	157	0.574
158	158	0.0422
159	159	0.888
16	16	0.426
160	160	0.519
161	161	0.531
162	162	0.258
163	163	0.99
164	164	0.0859
165	165	0.108
166	166	0.623
167	167	0.2
168	168	0.533
169	169	0.00821
17	17	0.292
18	18	0.141
19	19	0.25
2	2	0.984
20	20	0.534
21	21	0.639
22	22	0.201
23	23	0.147
24	24	0.204
25	25	0.186
26	26	0.025
27	27	0.577
28	28	0.572
29	29	0.0662
3	3	0.114
30	30	0.497
31	31	0.711
32	32	0.663
33	33	0.178
34	34	0.494
35	35	0.19
36	36	0.0593
37	37	0.0643
38	38	0.465
39	39	0.883
4	4	0.9
40	40	0.078
41	41	0.019
42	42	0.38
43	43	0.0903
44	44	0.988
45	45	0.88
46	46	0.217
47	47	0.516
48	48	0.409
49	49	0.127
5	5	0.12
50	50	0.944
51	51	0.334
52	52	0.42
53	53	0.277
54	54	0.402
55	55	0.572
56	56	0.775
57	57	0.798
58	58	0.093
59	59	0.174
6	6	0.795
60	60	0.0607
61	61	0.232
62	62	0.04
63	63	0.577
64	64	0.334
65	65	0.248
66	66	0.127
67	67	0.638
68	68	0.821
69	69	0.821
7	7	0.164
70	70	0.0355
71	71	0.0196
72	72	0.23
73	73	0.104
74	74	0.0807
75	75	0.064
76	76	0.199
77	77	0.549
78	78	0.143
79	79	0.133
8	8	0.533
80	80	0.293
81	81	0.275
82	82	0.114
83	83	0.701
84	84	0.689
85	85	0.0255
86	86	0.0702
87	87	0.339
88	88	0.551
89	89	0.365
9	9	0.297
90	90	0.0561
91	91	0.364
92	92	0.329
93	93	0.331
94	94	0.0307
95	95	0.089
96	96	0.509
97	97	0.936
98	98	0.14
99	99	0.0158

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs13224

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0011111 human CD14-positive CD16-negative Monocytes sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002371 (somatic cell)
0000766 (myeloid leukocyte)
0000219 (motile cell)
0000325 (stuff accumulating cell)
0000473 (defensive cell)
0000234 (phagocyte)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0000255 (eukaryotic cell)
0000576 (monocyte)
0000860 (classical monocyte)
0002057 (CD14-positive, CD16-negative classical monocyte)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0011111 (human CD14-positive CD16-negative Monocytes sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)
CL:0002057 (CD14-positive, CD16-negative classical monocyte)

@@ Line 1: / Line 1: @@
 {{f5samples
-|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000479,UBERON:0000480,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0001062,UBERON:0001434,UBERON:0001474,UBERON:0002050,UBERON:0002193,UBERON:0002204,UBERON:0002371,UBERON:0002384,UBERON:0002390,UBERON:0002405,UBERON:0002532,UBERON:0004120,UBERON:0004765,UBERON:0005423
+|DRA_sample_Accession=CAGE@SAMD00005516
-|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000037,CL:0000040,CL:0000048,CL:0000049,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000548,CL:0000557,CL:0000559,CL:0000566,CL:0000576,CL:0000723,CL:0000738,CL:0000763,CL:0000766,CL:0000837,CL:0000839,CL:0000860,CL:0000988,CL:0001012,CL:0002009,CL:0002031,CL:0002032,CL:0002057,CL:0002087,CL:0002194,CL:0002320,CL:0002371
+|accession_numbers=CAGE;DRX008165;DRR009037;DRZ000462;DRZ001847;DRZ011812;DRZ013197
+|ancestors_in_anatomy_facet=
+|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000766,CL:0000219,CL:0000325,CL:0000473,CL:0000234,CL:0000738,CL:0002087,CL:0000255,CL:0000576,CL:0000860,CL:0002057
 |ancestors_in_disease_facet=
+|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0011111
 |comment=
 |created_by=
 |creation_date=
+|data_phase=2
+|datafreeze_phase=2
 |def=
+|expression_enrichment_score=chr11:47400078..47400106,-!p1@SPI1!2.70!497.50!SPI1;;chr2:68592406..68592424,+!p1@PLEK!2.56!363.05!PLEK;;chr12:54778471..54778528,-!p1@ZNF385A!2.25!176.13!ZNF385A;;chr16:85932760..85932775,+!p1@IRF8!2.15!140.64!IRF8;;chr14:75745523..75745537,+!p1@FOS!1.98!10441.96!FOS;;chr7:115670804..115670825,-!p1@TFEC!1.97!91.44!TFEC;;chr12:54694758..54694805,-!p1@NFE2!1.91!95.25!NFE2;;chr7:50344289..50344323,+!p1@IKZF1!1.89!76.83!IKZF1;;chr11:47400062..47400077,-!p2@SPI1!1.87!73.13!SPI1;;chr21:34442439..34442455,+!p1@OLIG1!1.68!47.40!OLIG1;;chr11:47399947..47399961,-!p3@SPI1!1.64!42.68!SPI1;;chr10:51572408..51572454,+!p3@NCOA4!1.60!214.66!NCOA4;;chr11:47399996..47400014,-!p4@SPI1!1.55!34.15!SPI1;;chr2:145277640..145277771,-!p1@ZEB2!1.51!402.59!ZEB2;;chr2:157189180..157189290,-!p1@NR4A2!1.47!142.77!NR4A2;;chr2:70142232..70142251,+!p1@MXD1!1.46!151.19!MXD1;;chr7:128577972..128578047,+!p1@IRF5!1.45!42.12!IRF5;;chr20:39317868..39317884,-!p1@MAFB!1.44!301.94!MAFB;;chr5:88178983..88179012,-!p1@MEF2C!1.44!196.58!MEF2C;;chr11:47400032..47400043,-!p5@SPI1!1.41!24.71!SPI1;;chr6:144385698..144385742,-!p2@PLAGL1!1.40!29.43!PLAGL1;;chr19:45971246..45971265,+!p1@FOSB!1.35!380.91!FOSB;;chr12:54694807..54694832,-!p3@NFE2!1.35!21.23!NFE2;;chr7:149470641..149470694,-!p1@ZNF467!1.34!93.01!ZNF467;;chr19:13213662..13213686,-!p1@LYL1!1.34!30.78!LYL1;;chr11:47400045..47400060,-!p6@SPI1!1.34!21.12!SPI1;;chr12:72056800..72056834,+!p1@THAP2!1.33!27.07!THAP2;;chr21:34442540..34442560,+!p2@OLIG1!1.33!20.56!OLIG1;;chrY:21906594..21906622,-!p1@KDM5D!1.32!19.66!KDM5D;;chr19:12902289..12902307,+!p1@JUNB!1.31!4260.06!JUNB;;chr14:75746722..75746777,+!p2@FOS!1.31!24.94!FOS;;chr9:110250697..110250738,-!p2@KLF4!1.31!22.80!KLF4;;chr2:28618532..28618610,+!p4@FOSL2!1.29!31.56!FOSL2;;chr7:50343634..50343717,+!p2@IKZF1!1.29!18.31!IKZF1;;chr2:68592394..68592405,+!p2@PLEK!1.25!16.85!PLEK;;chr9:110252035..110252057,-!p1@KLF4!1.23!250.27!KLF4;;chr19:33793430..33793447,-!p1@CEBPA!1.23!67.28!CEBPA;;chr19:42636586..42636607,-!p1@POU2F2!1.23!44.03!POU2F2;;chr10:35416142..35416169,+!p3@CREM!1.22!41.00!CREM;;chr5:176735063..176735088,-!p2@MXD3!1.22!15.73!MXD3;;chr11:128563948..128564003,+!p1@FLI1!1.20!175.01!FLI1;;chr12:54778351..54778378,-!p6@ZNF385A!1.20!14.94!ZNF385A;;chr9:102584262..102584276,+!p1@NR4A3!1.18!31.68!NR4A3;;chr4:106068026..106068084,+!p1@TET2!1.17!122.33!TET2;;chr13:41593425..41593480,-!p1@ELF1!1.17!87.84!ELF1;;chr2:157198916..157198978,-!p2@NR4A2!1.17!47.74!NR4A2;;chr20:48807456..48807475,+!p3@CEBPB!1.17!26.40!CEBPB;;chr12:52445218..52445237,+!p1@NR4A1!1.15!162.65!NR4A1;;chr9:117150254..117150271,-!p1@AKNA!1.14!34.82!AKNA;;chr20:48807430..48807439,+!p8@CEBPB!1.14!19.43!CEBPB;;chr7:28725715..28725727,+!p3@CREB5!1.13!14.60!CREB5;;chr17:38497662..38497713,+!p4@RARA!1.13!14.38!RARA;;chr3:39195075..39195088,-!p1@CSRNP1!1.12!75.71!CSRNP1;;chr21:36421535..36421610,-!p2@RUNX1!1.12!43.92!RUNX1;;chr2:208031943..208031978,-!p5@KLF7!1.12!16.29!KLF7;;chr16:88752889..88752921,-!p1@SNAI3!1.12!14.27!SNAI3;;chr19:54041669..54041697,+!p2@ZNF331!1.11!11.91!ZNF331;;chr8:48650715..48650735,-!p1@CEBPD!1.10!1478.92!CEBPD;;chr10:94449703..94449718,+!p1@HHEX!1.10!45.16!HHEX;;chr10:51572339..51572376,+!p4@NCOA4!1.10!26.06!NCOA4;;chr9:102584241..102584261,+!p4@NR4A3!1.09!17.52!NR4A3;;chr12:54694653..54694672,-!p2@NFE2!1.08!11.01!NFE2;;chr2:61108695..61108753,+!p1@REL!1.07!74.36!REL;;chr5:88179017..88179046,-!p2@MEF2C!1.07!43.81!MEF2C;;chrX:106960180..106960197,-!p2@TSC22D3!1.07!41.34!TSC22D3;;chr2:145277882..145277967,-!p3@ZEB2!1.07!18.65!ZEB2;;chr6:44233252..44233296,-!p1@NFKBIE!1.06!103.57!NFKBIE;;chr7:28725740..28725778,+!p1@CREB5!1.06!95.25!CREB5;;chr17:38498594..38498661,+!p2@RARA!1.05!34.37!RARA;;chr1:40367530..40367597,-!p1@MYCL1!1.05!18.65!MYCL1;;chr6:106534192..106534224,+!p1@PRDM1!1.03!27.86!PRDM1;;chr14:35872962..35873025,-!p3@NFKBIA!1.02!24.38!NFKBIA;;chr14:75988771..75988826,+!p1@BATF!1.01!12.47!BATF;;chr12:72056773..72056796,+!p3@THAP2!1.01!12.02!THAP2;;chr19:45251395..45251432,+!p8@BCL3!1.01!9.21!BCL3;;chr14:35873947..35873965,-!p1@NFKBIA!1.00!584.90!NFKBIA;;chr1:25256756..25256774,-!p1@RUNX3!1.00!16.96!RUNX3;;chr6:15246261..15246312,+!p1@JARID2!0.99!217.24!JARID2;;chr8:48650697..48650708,-!p2@CEBPD!0.98!67.17!CEBPD;;chr7:149470540..149470596,-!p2@ZNF467!0.98!11.23!ZNF467;;chr6:391743..391759,+!p1@IRF4!0.98!8.65!IRF4;;chr3:101568349..101568365,+!p1@NFKBIZ!0.97!444.15!NFKBIZ;;chr1:156470515..156470542,-!p2@MEF2D!0.97!44.48!MEF2D;;chr20:56195474..56195506,-!p1@ZBP1!0.97!8.42!ZBP1;;chr7:137620684..137620711,-!p4@CREB3L2!0.97!8.42!CREB3L2;;chr19:54058073..54058088,+!p1@ZNF331!0.97!8.31!ZNF331;;chr14:75746340..75746368,+!p3@FOS!0.97!8.31!FOS;;chr7:150974206..150974255,-!p1@SMARCD3!0.96!51.78!SMARCD3;;chr6:15246200..15246214,+!p2@JARID2!0.96!22.80!JARID2;;chr19:36391434..36391450,-!p1@NFKBID!0.95!15.84!NFKBID;;chr4:185395633..185395651,-!p2@IRF2!0.95!12.92!IRF2;;chr16:3313791..3313834,+!p2@ZNF263!0.94!17.41!ZNF263;;chr16:31885093..31885165,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+|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000234;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000576;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000763;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000766;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000860;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002193;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002390;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002405
+|ffid_belonging_in_development=CL:0000049,CL:0000134,CL:0002057
 |fonse_cell_line=
 |fonse_cell_line_closure=
@@ Line 34: / Line 42: @@
 |fonse_treatment_closure=
 |has_quality=
+|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252bCD16-%2520Monocytes%252c%2520donor1.CNhs13224.11788-124B6.hg19.nobarcode.bam
+|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252bCD16-%2520Monocytes%252c%2520donor1.CNhs13224.11788-124B6.hg19.ctss.bed.gz
+|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252bCD16-%2520Monocytes%252c%2520donor1.CNhs13224.11788-124B6.hg19.nobarcode.rdna.fa.gz
+|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14%252bCD16-%2520Monocytes%252c%2520donor1.CNhs13224.11788-124B6.hg38.nobarcode.bam
+|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14%252bCD16-%2520Monocytes%252c%2520donor1.CNhs13224.11788-124B6.hg38.nobarcode.ctss.bed.gz
 |id=FF:11788-124B6
-|is_a=EFO:0002091;;FF:0000002;;FF:0000210;;FF:0011111
+|is_a=EFO:0002091;;FF:0011111
+|is_obsolete=
+|library_id=CNhs13224
+|library_id_phase_based=2:CNhs13224
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11788
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11788
 |name=CD14+CD16- Monocytes, donor1
 |namespace=
@@ Line 41: / Line 61: @@
 |profile_cagescan=,,,
 |profile_hcage=CNhs13224,LSID1005,release012,COMPLETED
-|profile_rnaseq=,,,
+|profile_rnaseq=
 |profile_srnaseq=,,,
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 |rna_box=124
 |rna_catalog_number=
@@ Line 56: / Line 79: @@
 |rna_weight_ug=2.8996
 |sample_age=25
+|sample_category=primary cells
 |sample_cell_catalog=
 |sample_cell_line=
@@ Line 68: / Line 92: @@
 |sample_ethnicity=
 |sample_experimental_condition=
+|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.67093757588849e-226!GO:0043227;membrane-bound organelle;2.28532482592221e-158!GO:0043231;intracellular membrane-bound organelle;4.9189221414394e-158!GO:0043226;organelle;8.12793047535952e-145!GO:0043229;intracellular organelle;5.99701725870229e-144!GO:0005737;cytoplasm;3.33777837959027e-139!GO:0044444;cytoplasmic part;2.12107674772604e-102!GO:0044422;organelle part;1.95090347944097e-92!GO:0044446;intracellular organelle part;1.23409766796924e-90!GO:0044237;cellular metabolic process;8.26709051490217e-82!GO:0044238;primary metabolic process;5.04935167316154e-79!GO:0043170;macromolecule metabolic process;2.08357866346596e-77!GO:0032991;macromolecular complex;7.7530211449526e-74!GO:0030529;ribonucleoprotein complex;1.65050920128932e-67!GO:0003723;RNA binding;1.6791888720642e-65!GO:0005634;nucleus;1.34792268699052e-64!GO:0044428;nuclear part;1.12507923846113e-58!GO:0043233;organelle lumen;1.77225348594543e-52!GO:0031974;membrane-enclosed lumen;1.77225348594543e-52!GO:0005515;protein binding;1.67274169938146e-50!GO:0005739;mitochondrion;9.00728163069642e-50!GO:0006412;translation;3.37716636853818e-49!GO:0019538;protein metabolic process;1.25149662795768e-47!GO:0033036;macromolecule localization;6.93322630156406e-47!GO:0015031;protein transport;2.37115253374508e-45!GO:0045184;establishment of protein localization;6.69321564041106e-45!GO:0043283;biopolymer metabolic process;7.92621197621761e-45!GO:0044267;cellular protein metabolic process;1.73764143519234e-44!GO:0044260;cellular macromolecule metabolic process;1.77432265850032e-44!GO:0010467;gene expression;6.963833539478e-44!GO:0008104;protein localization;1.35451701386196e-43!GO:0006396;RNA processing;2.05438630618345e-41!GO:0031090;organelle membrane;1.58268512748859e-39!GO:0005840;ribosome;3.72934633204884e-38!GO:0009059;macromolecule biosynthetic process;4.34729951454706e-38!GO:0016071;mRNA metabolic process;2.98342429873999e-37!GO:0005829;cytosol;5.86755495300233e-37!GO:0043234;protein complex;1.58724808383989e-36!GO:0031981;nuclear lumen;1.50834808305133e-35!GO:0044429;mitochondrial part;2.19879862257541e-35!GO:0009058;biosynthetic process;1.25634853418534e-34!GO:0003735;structural constituent of ribosome;1.4451203559441e-34!GO:0031967;organelle envelope;1.65937298481328e-34!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.81860076288314e-34!GO:0031975;envelope;3.57804317693622e-34!GO:0044249;cellular biosynthetic process;8.91232939613937e-34!GO:0008380;RNA splicing;1.34892438491811e-33!GO:0006397;mRNA processing;3.57312216434986e-32!GO:0033279;ribosomal subunit;1.06881167740093e-31!GO:0006886;intracellular protein transport;1.24471964320545e-29!GO:0046907;intracellular transport;1.27114845411514e-28!GO:0005830;cytosolic ribosome (sensu Eukaryota);6.38217316031078e-27!GO:0016043;cellular component organization and biogenesis;1.77764621300027e-26!GO:0005740;mitochondrial envelope;4.90435391980234e-25!GO:0005681;spliceosome;4.94102314114841e-25!GO:0003676;nucleic acid binding;6.9560125221263e-25!GO:0065003;macromolecular complex assembly;2.55049098108644e-24!GO:0031966;mitochondrial membrane;3.64166469988857e-24!GO:0022613;ribonucleoprotein complex biogenesis and assembly;3.74113653457515e-24!GO:0005654;nucleoplasm;5.65281043272174e-24!GO:0019866;organelle inner membrane;1.94444542455417e-23!GO:0044445;cytosolic part;1.0520961957925e-22!GO:0051649;establishment of cellular localization;8.32273547648453e-22!GO:0006915;apoptosis;1.82124624349564e-21!GO:0012501;programmed cell death;2.27729084117515e-21!GO:0051641;cellular localization;3.08243736053802e-21!GO:0006119;oxidative phosphorylation;9.30679884827279e-21!GO:0005743;mitochondrial inner membrane;1.11559515186191e-20!GO:0022607;cellular component assembly;1.59263703897971e-20!GO:0000166;nucleotide binding;4.27876980050479e-20!GO:0016070;RNA metabolic process;4.59291121927951e-20!GO:0008219;cell death;7.70546844295646e-20!GO:0016265;death;7.70546844295646e-20!GO:0044451;nucleoplasm part;2.71061033131088e-19!GO:0044265;cellular macromolecule catabolic process;7.85035296232863e-19!GO:0006512;ubiquitin cycle;1.63940362036735e-18!GO:0022618;protein-RNA complex assembly;1.83684450735366e-18!GO:0008134;transcription factor binding;7.00383752938565e-18!GO:0043412;biopolymer modification;1.76802043083154e-17!GO:0044455;mitochondrial membrane part;2.96626178879534e-17!GO:0006996;organelle organization and biogenesis;4.29164218842157e-17!GO:0015935;small ribosomal subunit;1.14092974506825e-16!GO:0016192;vesicle-mediated transport;1.26811432279658e-16!GO:0006605;protein targeting;4.1117143970609e-16!GO:0015934;large ribosomal subunit;6.14306590557827e-16!GO:0044248;cellular catabolic process;1.0250754725949e-15!GO:0006259;DNA metabolic process;1.04423091506108e-15!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.13562836572571e-15!GO:0006464;protein modification process;1.32384045884278e-15!GO:0016462;pyrophosphatase activity;1.37465498415069e-15!GO:0016817;hydrolase activity, acting on acid anhydrides;1.46984699924681e-15!GO:0019941;modification-dependent protein catabolic process;2.82372989521471e-15!GO:0043632;modification-dependent macromolecule catabolic process;2.82372989521471e-15!GO:0051603;proteolysis involved in cellular protein catabolic process;2.90388619013445e-15!GO:0016874;ligase activity;3.62760012632619e-15!GO:0006511;ubiquitin-dependent protein catabolic process;4.88696650420192e-15!GO:0008135;translation factor activity, nucleic acid binding;5.08677459778467e-15!GO:0048770;pigment granule;5.79828210663952e-15!GO:0042470;melanosome;5.79828210663952e-15!GO:0044257;cellular protein catabolic process;5.92210973353759e-15!GO:0017111;nucleoside-triphosphatase activity;7.1476967263863e-15!GO:0043285;biopolymer catabolic process;1.27980110197406e-14!GO:0016604;nuclear body;1.29200687401606e-14!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.85651883083549e-14!GO:0032553;ribonucleotide binding;4.96434214934567e-14!GO:0032555;purine ribonucleotide binding;4.96434214934567e-14!GO:0009057;macromolecule catabolic process;5.09428446018964e-14!GO:0000502;proteasome complex (sensu Eukaryota);7.54404160668248e-14!GO:0005746;mitochondrial respiratory chain;7.96797386592262e-14!GO:0017076;purine nucleotide binding;8.6647693371087e-14!GO:0043687;post-translational protein modification;1.02580229127468e-13!GO:0006913;nucleocytoplasmic transport;1.42468880272317e-13!GO:0042981;regulation of apoptosis;2.14875742999891e-13!GO:0051169;nuclear transport;2.88161403253244e-13!GO:0043067;regulation of programmed cell death;3.54959153975062e-13!GO:0005773;vacuole;3.65263017471095e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);4.62411700016284e-13!GO:0006457;protein folding;6.39342487461498e-13!GO:0051186;cofactor metabolic process;6.91262257700483e-13!GO:0003743;translation initiation factor activity;8.33721665788195e-13!GO:0012505;endomembrane system;8.39973069893097e-13!GO:0016607;nuclear speck;9.57192331799339e-13!GO:0031980;mitochondrial lumen;1.0682456906295e-12!GO:0005759;mitochondrial matrix;1.0682456906295e-12!GO:0050136;NADH dehydrogenase (quinone) activity;1.16863544301122e-12!GO:0003954;NADH dehydrogenase activity;1.16863544301122e-12!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.16863544301122e-12!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.18795440853688e-12!GO:0006413;translational initiation;2.38339028998595e-12!GO:0000323;lytic vacuole;2.87476364460074e-12!GO:0005764;lysosome;2.87476364460074e-12!GO:0005730;nucleolus;6.99871199425798e-12!GO:0003712;transcription cofactor activity;1.22127041091528e-11!GO:0005768;endosome;1.85373253355481e-11!GO:0007249;I-kappaB kinase/NF-kappaB cascade;2.08423939195247e-11!GO:0042775;organelle ATP synthesis coupled electron transport;2.84020423660361e-11!GO:0042773;ATP synthesis coupled electron transport;2.84020423660361e-11!GO:0007243;protein kinase cascade;3.39513211145126e-11!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;3.51393456493745e-11!GO:0000398;nuclear mRNA splicing, via spliceosome;4.6199033201206e-11!GO:0000375;RNA splicing, via transesterification reactions;4.6199033201206e-11!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;4.6199033201206e-11!GO:0005794;Golgi apparatus;5.15886282200732e-11!GO:0050794;regulation of cellular process;5.25582913457889e-11!GO:0006732;coenzyme metabolic process;6.03664550979829e-11!GO:0030964;NADH dehydrogenase complex (quinone);6.09682872743135e-11!GO:0045271;respiratory chain complex I;6.09682872743135e-11!GO:0005747;mitochondrial respiratory chain complex I;6.09682872743135e-11!GO:0006446;regulation of translational initiation;6.78262197035156e-11!GO:0030163;protein catabolic process;7.24991780184423e-11!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;9.21405909287179e-11!GO:0006793;phosphorus metabolic process;1.43554831957355e-10!GO:0006796;phosphate metabolic process;1.43554831957355e-10!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.50684044590596e-10!GO:0005783;endoplasmic reticulum;1.90314611956827e-10!GO:0005524;ATP binding;2.21819474440664e-10!GO:0016787;hydrolase activity;2.42712000170179e-10!GO:0032559;adenyl ribonucleotide binding;2.7469630025921e-10!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;3.33377371085236e-10!GO:0043228;non-membrane-bound organelle;3.36577213878516e-10!GO:0043232;intracellular non-membrane-bound organelle;3.36577213878516e-10!GO:0051246;regulation of protein metabolic process;3.71933576485529e-10!GO:0030554;adenyl nucleotide binding;5.04385159028941e-10!GO:0017038;protein import;5.29336599697882e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;9.04132358221702e-10!GO:0048193;Golgi vesicle transport;1.14101706599063e-09!GO:0006974;response to DNA damage stimulus;1.27891708048171e-09!GO:0005635;nuclear envelope;1.68345790549177e-09!GO:0065009;regulation of a molecular function;2.14774680410991e-09!GO:0009056;catabolic process;2.67428738505909e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.7325905017782e-09!GO:0042623;ATPase activity, coupled;2.81841379390796e-09!GO:0048523;negative regulation of cellular process;2.81841379390796e-09!GO:0006325;establishment and/or maintenance of chromatin architecture;3.51671810386241e-09!GO:0016887;ATPase activity;3.82383895120035e-09!GO:0008639;small protein conjugating enzyme activity;3.88740966224898e-09!GO:0007242;intracellular signaling cascade;4.15118782168228e-09!GO:0019787;small conjugating protein ligase activity;5.03331513412858e-09!GO:0019829;cation-transporting ATPase activity;5.91940591053731e-09!GO:0016310;phosphorylation;6.0007334294724e-09!GO:0004842;ubiquitin-protein ligase activity;7.93670690585294e-09!GO:0009259;ribonucleotide metabolic process;8.90482715170099e-09!GO:0015986;ATP synthesis coupled proton transport;9.1042409521607e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;9.1042409521607e-09!GO:0005761;mitochondrial ribosome;1.04406825660662e-08!GO:0000313;organellar ribosome;1.04406825660662e-08!GO:0006323;DNA packaging;1.14273692407588e-08!GO:0009150;purine ribonucleotide metabolic process;1.23665855488574e-08!GO:0009152;purine ribonucleotide biosynthetic process;1.28668114370408e-08!GO:0044453;nuclear membrane part;1.31162413018796e-08!GO:0006163;purine nucleotide metabolic process;1.3503940457343e-08!GO:0051082;unfolded protein binding;1.50607557950915e-08!GO:0006164;purine nucleotide biosynthetic process;1.56152909262066e-08!GO:0008565;protein transporter activity;1.99591303010069e-08!GO:0044432;endoplasmic reticulum part;2.05174526448554e-08!GO:0008026;ATP-dependent helicase activity;2.12422739156868e-08!GO:0009055;electron carrier activity;2.12422739156868e-08!GO:0009260;ribonucleotide biosynthetic process;2.52603418864601e-08!GO:0004386;helicase activity;3.13246786529234e-08!GO:0016568;chromatin modification;3.15257772670309e-08!GO:0015078;hydrogen ion transmembrane transporter activity;3.30051355780647e-08!GO:0050657;nucleic acid transport;3.44117969976141e-08!GO:0051236;establishment of RNA localization;3.44117969976141e-08!GO:0050658;RNA transport;3.44117969976141e-08!GO:0051170;nuclear import;3.52323320237772e-08!GO:0031965;nuclear membrane;3.70564498000015e-08!GO:0006403;RNA localization;4.63190034500394e-08!GO:0019222;regulation of metabolic process;5.85781367272903e-08!GO:0006606;protein import into nucleus;6.20358824912452e-08!GO:0005770;late endosome;8.90007413916426e-08!GO:0006754;ATP biosynthetic process;9.00660419307094e-08!GO:0006753;nucleoside phosphate metabolic process;9.00660419307094e-08!GO:0006417;regulation of translation;9.14805391982136e-08!GO:0043069;negative regulation of programmed cell death;9.14805391982136e-08!GO:0003713;transcription coactivator activity;9.58635732467344e-08!GO:0048519;negative regulation of biological process;9.72308866726813e-08!GO:0043066;negative regulation of apoptosis;9.78986248096501e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.13411944512524e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.13411944512524e-07!GO:0009142;nucleoside triphosphate biosynthetic process;1.22281166243262e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.22281166243262e-07!GO:0006366;transcription from RNA polymerase II promoter;1.24558801395527e-07!GO:0016469;proton-transporting two-sector ATPase complex;1.27599904802185e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.28498657226015e-07!GO:0005839;proteasome core complex (sensu Eukaryota);1.35826154007147e-07!GO:0042254;ribosome biogenesis and assembly;1.41272261599615e-07!GO:0051188;cofactor biosynthetic process;1.4717568731136e-07!GO:0050789;regulation of biological process;1.75279656370143e-07!GO:0009060;aerobic respiration;1.83820027698888e-07!GO:0008047;enzyme activator activity;2.33524159121977e-07!GO:0006281;DNA repair;2.56219398541048e-07!GO:0016881;acid-amino acid ligase activity;2.7275456882938e-07!GO:0065002;intracellular protein transport across a membrane;2.78720821127626e-07!GO:0016564;transcription repressor activity;2.78996507505335e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;2.91311899816742e-07!GO:0009144;purine nucleoside triphosphate metabolic process;2.91311899816742e-07!GO:0009199;ribonucleoside triphosphate metabolic process;3.00033450908542e-07!GO:0051276;chromosome organization and biogenesis;3.00033450908542e-07!GO:0031324;negative regulation of cellular metabolic process;3.19508404009238e-07!GO:0046034;ATP metabolic process;4.08967735095468e-07!GO:0006916;anti-apoptosis;5.19892188416575e-07!GO:0007049;cell cycle;5.32906957665341e-07!GO:0009141;nucleoside triphosphate metabolic process;6.01351321140095e-07!GO:0005643;nuclear pore;6.32656158739051e-07!GO:0004298;threonine endopeptidase activity;8.72845859044794e-07!GO:0042175;nuclear envelope-endoplasmic reticulum network;9.72908833831023e-07!GO:0006461;protein complex assembly;1.05780708204852e-06!GO:0005789;endoplasmic reticulum membrane;1.15918068058767e-06!GO:0009108;coenzyme biosynthetic process;1.16098850020785e-06!GO:0051028;mRNA transport;1.22452381168749e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.28034221404355e-06!GO:0044440;endosomal part;1.33125772251502e-06!GO:0010008;endosome membrane;1.33125772251502e-06!GO:0043065;positive regulation of apoptosis;1.46215330805893e-06!GO:0043068;positive regulation of programmed cell death;1.75922941151194e-06!GO:0006950;response to stress;1.79371248980586e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.90311043105852e-06!GO:0009967;positive regulation of signal transduction;1.90774967813617e-06!GO:0048475;coated membrane;2.14122331740656e-06!GO:0030117;membrane coat;2.14122331740656e-06!GO:0009615;response to virus;2.16777751523303e-06!GO:0043566;structure-specific DNA binding;2.37464817470743e-06!GO:0045333;cellular respiration;2.37464817470743e-06!GO:0031326;regulation of cellular biosynthetic process;2.38344247846755e-06!GO:0050790;regulation of catalytic activity;3.16492774557719e-06!GO:0005525;GTP binding;3.60123347850918e-06!GO:0051726;regulation of cell cycle;3.64224075409634e-06!GO:0031323;regulation of cellular metabolic process;3.72790297864895e-06!GO:0030532;small nuclear ribonucleoprotein complex;3.84496783003875e-06!GO:0005774;vacuolar membrane;3.91011935783927e-06!GO:0006399;tRNA metabolic process;3.92507945143052e-06!GO:0019899;enzyme binding;4.13021669570367e-06!GO:0005793;ER-Golgi intermediate compartment;4.44056904279557e-06!GO:0000074;regulation of progression through cell cycle;4.61337002105174e-06!GO:0009892;negative regulation of metabolic process;4.7122788878446e-06!GO:0045259;proton-transporting ATP synthase complex;4.81427594356899e-06!GO:0016740;transferase activity;4.95529536751404e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;5.14554079614873e-06!GO:0006752;group transfer coenzyme metabolic process;5.29437337292728e-06!GO:0007264;small GTPase mediated signal transduction;5.61610784936202e-06!GO:0030120;vesicle coat;5.66480382650644e-06!GO:0030662;coated vesicle membrane;5.66480382650644e-06!GO:0009719;response to endogenous stimulus;6.2587436728888e-06!GO:0009889;regulation of biosynthetic process;6.57712026339008e-06!GO:0003697;single-stranded DNA binding;6.80110590702222e-06!GO:0032446;protein modification by small protein conjugation;7.05993910435853e-06!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;7.49288230081391e-06!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;8.30348430038796e-06!GO:0016563;transcription activator activity;8.71993243321734e-06!GO:0006099;tricarboxylic acid cycle;1.0145132092803e-05!GO:0046356;acetyl-CoA catabolic process;1.0145132092803e-05!GO:0045786;negative regulation of progression through cell cycle;1.04463109608906e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;1.04945394807883e-05!GO:0046930;pore complex;1.15669710627205e-05!GO:0006401;RNA catabolic process;1.3134841206531e-05!GO:0016567;protein ubiquitination;1.31664583461682e-05!GO:0007005;mitochondrion organization and biogenesis;1.36702275882725e-05!GO:0006917;induction of apoptosis;1.4368853987502e-05!GO:0044437;vacuolar part;1.59111972441148e-05!GO:0016481;negative regulation of transcription;1.61632860664246e-05!GO:0006888;ER to Golgi vesicle-mediated transport;1.72539450115616e-05!GO:0012502;induction of programmed cell death;1.8507914053534e-05!GO:0003924;GTPase activity;1.88459995470447e-05!GO:0000245;spliceosome assembly;1.90648225836218e-05!GO:0065007;biological regulation;2.26814407003084e-05!GO:0005765;lysosomal membrane;2.29343794517075e-05!GO:0006613;cotranslational protein targeting to membrane;2.63281225840232e-05!GO:0000151;ubiquitin ligase complex;2.69972406256003e-05!GO:0051187;cofactor catabolic process;2.73358246050225e-05!GO:0008654;phospholipid biosynthetic process;2.75274009919517e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;2.83145417845921e-05!GO:0006084;acetyl-CoA metabolic process;2.86033722092092e-05!GO:0003714;transcription corepressor activity;3.09102077260889e-05!GO:0016072;rRNA metabolic process;3.14220906810302e-05!GO:0016044;membrane organization and biogenesis;3.34297513769877e-05!GO:0016779;nucleotidyltransferase activity;4.08241080659199e-05!GO:0048522;positive regulation of cellular process;4.46623716403041e-05!GO:0003724;RNA helicase activity;4.49195973178394e-05!GO:0006364;rRNA processing;4.50431777449907e-05!GO:0016197;endosome transport;4.60495165827946e-05!GO:0010468;regulation of gene expression;4.88074756071778e-05!GO:0051168;nuclear export;5.23270767746786e-05!GO:0032561;guanyl ribonucleotide binding;5.8483150344785e-05!GO:0019001;guanyl nucleotide binding;5.8483150344785e-05!GO:0051336;regulation of hydrolase activity;5.92906017123738e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;5.99532745423909e-05!GO:0009117;nucleotide metabolic process;6.0695369571029e-05!GO:0005096;GTPase activator activity;6.71577578678806e-05!GO:0005694;chromosome;6.96159804415038e-05!GO:0031902;late endosome membrane;8.1801877317676e-05!GO:0009109;coenzyme catabolic process;9.04951471023342e-05!GO:0006333;chromatin assembly or disassembly;9.60959212555282e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;9.91952919208383e-05!GO:0015399;primary active transmembrane transporter activity;9.91952919208383e-05!GO:0044262;cellular carbohydrate metabolic process;9.91952919208383e-05!GO:0065004;protein-DNA complex assembly;0.000104051444905336!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.000107348842186872!GO:0004812;aminoacyl-tRNA ligase activity;0.000107348842186872!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.000107348842186872!GO:0022402;cell cycle process;0.000136436924274216!GO:0005798;Golgi-associated vesicle;0.000142841898086949!GO:0030695;GTPase regulator activity;0.000153827961581809!GO:0043038;amino acid activation;0.000163391108233392!GO:0006418;tRNA aminoacylation for protein translation;0.000163391108233392!GO:0043039;tRNA aminoacylation;0.000163391108233392!GO:0005885;Arp2/3 protein complex;0.000163953756792011!GO:0006612;protein targeting to membrane;0.000197279250019129!GO:0006818;hydrogen transport;0.000201592091585971!GO:0007034;vacuolar transport;0.000207480222681581!GO:0031252;leading edge;0.000219923458857545!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000220124171824924!GO:0015992;proton transport;0.000223819240151347!GO:0008632;apoptotic program;0.000227574204218344!GO:0031982;vesicle;0.000280000663407414!GO:0004674;protein serine/threonine kinase activity;0.000287473397088582!GO:0044431;Golgi apparatus part;0.000288636726586164!GO:0046822;regulation of nucleocytoplasmic transport;0.000296279416341325!GO:0005769;early endosome;0.000315508728905293!GO:0006091;generation of precursor metabolites and energy;0.000324740134016478!GO:0006350;transcription;0.00032725255017056!GO:0008234;cysteine-type peptidase activity;0.000341708271582377!GO:0006402;mRNA catabolic process;0.0003488313384731!GO:0003729;mRNA binding;0.000385924011725696!GO:0008186;RNA-dependent ATPase activity;0.000428145000156494!GO:0043021;ribonucleoprotein binding;0.000457776762197918!GO:0022890;inorganic cation transmembrane transporter activity;0.000461423680973253!GO:0032940;secretion by cell;0.000484370361767576!GO:0048518;positive regulation of biological process;0.000508336896601407!GO:0005741;mitochondrial outer membrane;0.000586359468884799!GO:0008270;zinc ion binding;0.000621903005310134!GO:0000785;chromatin;0.000680167399289919!GO:0009966;regulation of signal transduction;0.000720957211243025!GO:0016491;oxidoreductase activity;0.000821962053007174!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.000821962053007174!GO:0044427;chromosomal part;0.00082991155141581!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000861969849709605!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000873270113357209!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000882779012614258!GO:0005667;transcription factor complex;0.000889374875901811!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000921006747722168!GO:0007040;lysosome organization and biogenesis;0.000936350269830336!GO:0045454;cell redox homeostasis;0.000964012274858847!GO:0019843;rRNA binding;0.00100771529312098!GO:0016363;nuclear matrix;0.00105604749139683!GO:0007265;Ras protein signal transduction;0.0011030666141111!GO:0051427;hormone receptor binding;0.0011030666141111!GO:0007041;lysosomal transport;0.00110856034175003!GO:0006650;glycerophospholipid metabolic process;0.0011274596117376!GO:0006897;endocytosis;0.0011274596117376!GO:0010324;membrane invagination;0.0011274596117376!GO:0003690;double-stranded DNA binding;0.00117307316660306!GO:0004004;ATP-dependent RNA helicase activity;0.00119086940690863!GO:0031410;cytoplasmic vesicle;0.00119691501283963!GO:0043623;cellular protein complex assembly;0.00127415772549051!GO:0005762;mitochondrial large ribosomal subunit;0.00127415772549051!GO:0000315;organellar large ribosomal subunit;0.00127415772549051!GO:0031968;organelle outer membrane;0.00130983140862855!GO:0031988;membrane-bound vesicle;0.00139772305776718!GO:0051090;regulation of transcription factor activity;0.00150979931515909!GO:0046914;transition metal ion binding;0.00156904919275432!GO:0019867;outer membrane;0.00157082544730908!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00157082544730908!GO:0005637;nuclear inner membrane;0.00163763633357762!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00166189040656808!GO:0043492;ATPase activity, coupled to movement of substances;0.00166823388639885!GO:0030384;phosphoinositide metabolic process;0.00170210416616785!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00171935791665177!GO:0005083;small GTPase regulator activity;0.0017473394750413!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00175168942207823!GO:0035257;nuclear hormone receptor binding;0.0018034748434749!GO:0009607;response to biotic stimulus;0.00182682117372362!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00182682117372362!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00182682117372362!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00182682117372362!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0019434823385574!GO:0043087;regulation of GTPase activity;0.00194427335885503!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00223073912766134!GO:0006643;membrane lipid metabolic process;0.00267276591635312!GO:0005813;centrosome;0.00267332526104753!GO:0051223;regulation of protein transport;0.00294629878364764!GO:0007050;cell cycle arrest;0.00307194017060021!GO:0007033;vacuole organization and biogenesis;0.00311389137546915!GO:0006891;intra-Golgi vesicle-mediated transport;0.00311389137546915!GO:0006611;protein export from nucleus;0.00333355124216949!GO:0006414;translational elongation;0.00339414044683301!GO:0016023;cytoplasmic membrane-bound vesicle;0.00340519498928601!GO:0002376;immune system process;0.0034207132469858!GO:0033157;regulation of intracellular protein transport;0.00344448999487152!GO:0042306;regulation of protein import into nucleus;0.00344448999487152!GO:0006260;DNA replication;0.00344448999487152!GO:0000287;magnesium ion binding;0.00348274898295146!GO:0030658;transport vesicle membrane;0.00376909901086464!GO:0046467;membrane lipid biosynthetic process;0.00379398401598921!GO:0033116;ER-Golgi intermediate compartment membrane;0.00385863373722436!GO:0000139;Golgi membrane;0.00388891025025294!GO:0030041;actin filament polymerization;0.00394032755173048!GO:0015980;energy derivation by oxidation of organic compounds;0.00395571006979784!GO:0009165;nucleotide biosynthetic process;0.00397946696762885!GO:0046474;glycerophospholipid biosynthetic process;0.00413741660235602!GO:0045892;negative regulation of transcription, DNA-dependent;0.00423822680663714!GO:0043281;regulation of caspase activity;0.00424500209915813!GO:0045045;secretory pathway;0.00476884345268371!GO:0030118;clathrin coat;0.00476884345268371!GO:0001816;cytokine production;0.00517640993313617!GO:0046489;phosphoinositide biosynthetic process;0.00521665088913981!GO:0043488;regulation of mRNA stability;0.00572588996171144!GO:0043487;regulation of RNA stability;0.00572588996171144!GO:0048468;cell development;0.00581211760813222!GO:0043433;negative regulation of transcription factor activity;0.00587972937812751!GO:0051252;regulation of RNA metabolic process;0.00596879097548501!GO:0008656;caspase activator activity;0.00614442317480525!GO:0000118;histone deacetylase complex;0.00615474815488827!GO:0003746;translation elongation factor activity;0.00623799736360428!GO:0043681;protein import into mitochondrion;0.00640588567605121!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0065621789142775!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0065621789142775!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00658003857703612!GO:0030036;actin cytoskeleton organization and biogenesis;0.00666404538888935!GO:0006672;ceramide metabolic process;0.00692893078447367!GO:0004185;serine carboxypeptidase activity;0.00700626701336982!GO:0048500;signal recognition particle;0.00712670985942449!GO:0031497;chromatin assembly;0.00722785008945457!GO:0006919;caspase activation;0.00754621596342025!GO:0030867;rough endoplasmic reticulum membrane;0.00771966104264143!GO:0006626;protein targeting to mitochondrion;0.00772709275990976!GO:0005815;microtubule organizing center;0.00777346807766666!GO:0005099;Ras GTPase activator activity;0.00796327289923333!GO:0032774;RNA biosynthetic process;0.00796327289923333!GO:0001726;ruffle;0.00805665495624885!GO:0032318;regulation of Ras GTPase activity;0.0081534833815!GO:0006351;transcription, DNA-dependent;0.00826168266321187!GO:0016251;general RNA polymerase II transcription factor activity;0.00826168266321187!GO:0005975;carbohydrate metabolic process;0.00841125878324722!GO:0046519;sphingoid metabolic process;0.00855245630127368!GO:0003725;double-stranded RNA binding;0.00857146967534582!GO:0016853;isomerase activity;0.0085783893023546!GO:0042990;regulation of transcription factor import into nucleus;0.00866390858795752!GO:0042991;transcription factor import into nucleus;0.00866390858795752!GO:0031072;heat shock protein binding;0.00880401906738113!GO:0019318;hexose metabolic process;0.00885988346617274!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00904605073647243!GO:0045047;protein targeting to ER;0.00904605073647243!GO:0006334;nucleosome assembly;0.0091790120421561!GO:0003899;DNA-directed RNA polymerase activity;0.00939226355436125!GO:0048487;beta-tubulin binding;0.00939226355436125!GO:0030660;Golgi-associated vesicle membrane;0.00942265799877973!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.00942265799877973!GO:0043280;positive regulation of caspase activity;0.00973553618549725!GO:0006607;NLS-bearing substrate import into nucleus;0.00981289841904295!GO:0045449;regulation of transcription;0.00985370454314305!GO:0005996;monosaccharide metabolic process;0.0100611100012693!GO:0006914;autophagy;0.0100804209068014!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0103379974887125!GO:0031625;ubiquitin protein ligase binding;0.0104492505685697!GO:0016788;hydrolase activity, acting on ester bonds;0.010603631699738!GO:0000314;organellar small ribosomal subunit;0.0106531282340888!GO:0005763;mitochondrial small ribosomal subunit;0.0106531282340888!GO:0007006;mitochondrial membrane organization and biogenesis;0.0107446597312633!GO:0005788;endoplasmic reticulum lumen;0.0109931485134695!GO:0008312;7S RNA binding;0.0110979727375923!GO:0051338;regulation of transferase activity;0.0110979727375923!GO:0018193;peptidyl-amino acid modification;0.0113454506959417!GO:0006383;transcription from RNA polymerase III promoter;0.0115139606629417!GO:0015036;disulfide oxidoreductase activity;0.0117405174174404!GO:0004518;nuclease activity;0.012645007610724!GO:0004177;aminopeptidase activity;0.0126572044763487!GO:0006644;phospholipid metabolic process;0.0129333179285468!GO:0019883;antigen processing and presentation of endogenous antigen;0.013194600942105!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.0131980589755756!GO:0006352;transcription initiation;0.013213048170444!GO:0006405;RNA export from nucleus;0.0136167156589363!GO:0002757;immune response-activating signal transduction;0.0138942667355987!GO:0051920;peroxiredoxin activity;0.0141173041573718!GO:0004197;cysteine-type endopeptidase activity;0.0148544843686042!GO:0000209;protein polyubiquitination;0.0148544843686042!GO:0051539;4 iron, 4 sulfur cluster binding;0.0150443058048668!GO:0004218;cathepsin S activity;0.0151055364699015!GO:0005684;U2-dependent spliceosome;0.0154912269544161!GO:0016584;nucleosome positioning;0.0154912269544161!GO:0030176;integral to endoplasmic reticulum membrane;0.0159063788466401!GO:0030663;COPI coated vesicle membrane;0.0159317158395763!GO:0030126;COPI vesicle coat;0.0159317158395763!GO:0051098;regulation of binding;0.0159575407667615!GO:0043022;ribosome binding;0.0159647749019813!GO:0046983;protein dimerization activity;0.0163224916146716!GO:0005057;receptor signaling protein activity;0.0166078746365383!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0166698827422763!GO:0048002;antigen processing and presentation of peptide antigen;0.0166698827422763!GO:0016301;kinase activity;0.0166698827422763!GO:0005048;signal sequence binding;0.0166867181826061!GO:0030134;ER to Golgi transport vesicle;0.0169625919536201!GO:0016791;phosphoric monoester hydrolase activity;0.0169625919536201!GO:0043549;regulation of kinase activity;0.0169625919536201!GO:0045113;regulation of integrin biosynthetic process;0.0172711300438747!GO:0045112;integrin biosynthetic process;0.0172711300438747!GO:0008033;tRNA processing;0.0172820636144159!GO:0030027;lamellipodium;0.0172820636144159!GO:0003711;transcription elongation regulator activity;0.0175635388483424!GO:0002467;germinal center formation;0.0176446978759143!GO:0002274;myeloid leukocyte activation;0.0176446978759143!GO:0030127;COPII vesicle coat;0.0176924034002816!GO:0012507;ER to Golgi transport vesicle membrane;0.0176924034002816!GO:0030133;transport vesicle;0.0178141045059975!GO:0030258;lipid modification;0.0178176614330343!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0179030691620944!GO:0019377;glycolipid catabolic process;0.0179973720165128!GO:0005869;dynactin complex;0.0180324958833887!GO:0033367;protein localization in mast cell secretory granule;0.0180324958833887!GO:0033365;protein localization in organelle;0.0180324958833887!GO:0033371;T cell secretory granule organization and biogenesis;0.0180324958833887!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.0180324958833887!GO:0033375;protease localization in T cell secretory granule;0.0180324958833887!GO:0042629;mast cell granule;0.0180324958833887!GO:0033377;maintenance of protein localization in T cell secretory granule;0.0180324958833887!GO:0033364;mast cell secretory granule organization and biogenesis;0.0180324958833887!GO:0033380;granzyme B localization in T cell secretory granule;0.0180324958833887!GO:0033379;maintenance of protease localization in T cell secretory granule;0.0180324958833887!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.0180324958833887!GO:0033368;protease localization in mast cell secretory granule;0.0180324958833887!GO:0033366;protein localization in secretory granule;0.0180324958833887!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.0180324958833887!GO:0033374;protein localization in T cell secretory granule;0.0180324958833887!GO:0051789;response to protein stimulus;0.0183902063876058!GO:0006986;response to unfolded protein;0.0183902063876058!GO:0032763;regulation of mast cell cytokine production;0.0187349147140054!GO:0032762;mast cell cytokine production;0.0187349147140054!GO:0008637;apoptotic mitochondrial changes;0.0189212072074143!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0191296206392071!GO:0010257;NADH dehydrogenase complex assembly;0.0191296206392071!GO:0033108;mitochondrial respiratory chain complex assembly;0.0191296206392071!GO:0030149;sphingolipid catabolic process;0.0191296206392071!GO:0006509;membrane protein ectodomain proteolysis;0.0193039195006827!GO:0033619;membrane protein proteolysis;0.0193039195006827!GO:0006007;glucose catabolic process;0.0194848793602565!GO:0030137;COPI-coated vesicle;0.0199343871480907!GO:0008610;lipid biosynthetic process;0.0199668637518811!GO:0051235;maintenance of localization;0.0199668637518811!GO:0001817;regulation of cytokine production;0.0204665536946716!GO:0030119;AP-type membrane coat adaptor complex;0.0205350607558785!GO:0042802;identical protein binding;0.020687451346935!GO:0050811;GABA receptor binding;0.0209665683857036!GO:0017091;AU-rich element binding;0.0210979418835393!GO:0050779;RNA destabilization;0.0210979418835393!GO:0000289;poly(A) tail shortening;0.0210979418835393!GO:0006458;'de novo' protein folding;0.0213305792186548!GO:0051084;'de novo' posttranslational protein folding;0.0213305792186548!GO:0006740;NADPH regeneration;0.0220142022877118!GO:0006098;pentose-phosphate shunt;0.0220142022877118!GO:0016859;cis-trans isomerase activity;0.0220497865163953!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0220497865163953!GO:0008624;induction of apoptosis by extracellular signals;0.0220497865163953!GO:0008629;induction of apoptosis by intracellular signals;0.0222855793667973!GO:0046483;heterocycle metabolic process;0.0222855793667973!GO:0007259;JAK-STAT cascade;0.0222855793667973!GO:0016505;apoptotic protease activator activity;0.0222855793667973!GO:0043085;positive regulation of catalytic activity;0.0225518477038885!GO:0022406;membrane docking;0.0227400235705181!GO:0048278;vesicle docking;0.0227400235705181!GO:0004722;protein serine/threonine phosphatase activity;0.0230093812571593!GO:0043300;regulation of leukocyte degranulation;0.0231840661637719!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0232638797387854!GO:0032386;regulation of intracellular transport;0.0232946263499393!GO:0016311;dephosphorylation;0.023616307425108!GO:0051540;metal cluster binding;0.0236220784272835!GO:0051536;iron-sulfur cluster binding;0.0236220784272835!GO:0006376;mRNA splice site selection;0.0236727825221356!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0236727825221356!GO:0033033;negative regulation of myeloid cell apoptosis;0.0236727825221356!GO:0001803;regulation of type III hypersensitivity;0.0236727825221356!GO:0032733;positive regulation of interleukin-10 production;0.0236727825221356!GO:0033025;regulation of mast cell apoptosis;0.0236727825221356!GO:0001805;positive regulation of type III hypersensitivity;0.0236727825221356!GO:0033023;mast cell homeostasis;0.0236727825221356!GO:0002431;Fc receptor mediated stimulatory signaling pathway;0.0236727825221356!GO:0033032;regulation of myeloid cell apoptosis;0.0236727825221356!GO:0001802;type III hypersensitivity;0.0236727825221356!GO:0033028;myeloid cell apoptosis;0.0236727825221356!GO:0042590;antigen processing and presentation of exogenous peptide antigen via MHC class I;0.0236727825221356!GO:0033026;negative regulation of mast cell apoptosis;0.0236727825221356!GO:0033024;mast cell apoptosis;0.0236727825221356!GO:0002764;immune response-regulating signal transduction;0.0236727825221356!GO:0006213;pyrimidine nucleoside metabolic process;0.0236727825221356!GO:0042613;MHC class II protein complex;0.0238567064152086!GO:0046966;thyroid hormone receptor binding;0.0239085222046446!GO:0006839;mitochondrial transport;0.0241068403182584!GO:0006497;protein amino acid lipidation;0.0242054300722989!GO:0045859;regulation of protein kinase activity;0.024719102596499!GO:0006302;double-strand break repair;0.0247199797801465!GO:0006289;nucleotide-excision repair;0.024873194643587!GO:0008287;protein serine/threonine phosphatase complex;0.0251830346224514!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0252757959925735!GO:0045947;negative regulation of translational initiation;0.025562872785058!GO:0006904;vesicle docking during exocytosis;0.0259150988213456!GO:0045185;maintenance of protein localization;0.0266024890313999!GO:0005669;transcription factor TFIID complex;0.0267183122347302!GO:0006013;mannose metabolic process;0.0268560444671146!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0270603853394052!GO:0008320;protein transmembrane transporter activity;0.0272408764621834!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.0273118119394767!GO:0030131;clathrin adaptor complex;0.0276196396546506!GO:0045792;negative regulation of cell size;0.0278419163808023!GO:0051345;positive regulation of hydrolase activity;0.0278419163808023!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0278419163808023!GO:0015002;heme-copper terminal oxidase activity;0.0278419163808023!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0278419163808023!GO:0004129;cytochrome-c oxidase activity;0.0278419163808023!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0280075801452055!GO:0031901;early endosome membrane;0.0281659043956396!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0282326069185978!GO:0008139;nuclear localization sequence binding;0.0284461399593291!GO:0015631;tubulin binding;0.0289160693915095!GO:0019882;antigen processing and presentation;0.0296035832465472!GO:0015923;mannosidase activity;0.029610363971043!GO:0019783;small conjugating protein-specific protease activity;0.0303714784642196!GO:0009893;positive regulation of metabolic process;0.0305623308416264!GO:0006516;glycoprotein catabolic process;0.0305972071177813!GO:0046479;glycosphingolipid catabolic process;0.0306586018334459!GO:0051101;regulation of DNA binding;0.0310302726975609!GO:0051092;activation of NF-kappaB transcription factor;0.0311364292272371!GO:0032760;positive regulation of tumor necrosis factor production;0.0311450424680442!GO:0030029;actin filament-based process;0.0313911221418713!GO:0000339;RNA cap binding;0.0316757912497845!GO:0002822;regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains.;0.0317225643163505!GO:0002819;regulation of adaptive immune response;0.0317225643163505!GO:0001516;prostaglandin biosynthetic process;0.0317225643163505!GO:0046457;prostanoid biosynthetic process;0.0317225643163505!GO:0047485;protein N-terminus binding;0.0319089868967035!GO:0043621;protein self-association;0.0321893977078648!GO:0017166;vinculin binding;0.032318628164645!GO:0030308;negative regulation of cell growth;0.0332357404536019!GO:0022884;macromolecule transmembrane transporter activity;0.0332357404536019!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0332357404536019!GO:0002224;toll-like receptor signaling pathway;0.0335812789097419!GO:0002221;pattern recognition receptor signaling pathway;0.0335812789097419!GO:0005484;SNAP receptor activity;0.033940478977773!GO:0044255;cellular lipid metabolic process;0.0341403602754087!GO:0030125;clathrin vesicle coat;0.0341403602754087!GO:0030665;clathrin coated vesicle membrane;0.0341403602754087!GO:0000278;mitotic cell cycle;0.0347072463492885!GO:0030503;regulation of cell redox homeostasis;0.0348252601074278!GO:0051087;chaperone binding;0.0349682422005156!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0349682422005156!GO:0008333;endosome to lysosome transport;0.0352320465120133!GO:0022415;viral reproductive process;0.0352320465120133!GO:0006261;DNA-dependent DNA replication;0.0353437282057288!GO:0006310;DNA recombination;0.0357866120902649!GO:0001819;positive regulation of cytokine production;0.0358098982317451!GO:0008180;signalosome;0.0360604331059322!GO:0004843;ubiquitin-specific protease activity;0.0362617670319853!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0364778064744662!GO:0006354;RNA elongation;0.0373485813194768!GO:0044438;microbody part;0.0373541439461947!GO:0044439;peroxisomal part;0.0373541439461947!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.037691899226708!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0380967586108487!GO:0040029;regulation of gene expression, epigenetic;0.038295308375474!GO:0006955;immune response;0.038347948659971!GO:0006338;chromatin remodeling;0.038656147871374!GO:0032640;tumor necrosis factor production;0.0391171508789765!GO:0060090;molecular adaptor activity;0.0392141395110181!GO:0004428;inositol or phosphatidylinositol kinase activity;0.039237471518721!GO:0016272;prefoldin complex;0.0395718960043512!GO:0006595;polyamine metabolic process;0.0399980504254937!GO:0030880;RNA polymerase complex;0.0400686565031897!GO:0032507;maintenance of cellular protein localization;0.0400686565031897!GO:0051049;regulation of transport;0.0403890452034281!GO:0046456;icosanoid biosynthetic process;0.0407778397764727!GO:0008538;proteasome activator activity;0.041043594198598!GO:0009116;nucleoside metabolic process;0.0413554291868344!GO:0030518;steroid hormone receptor signaling pathway;0.0413947884519714!GO:0002429;immune response-activating cell surface receptor signaling pathway;0.0432751890518736!GO:0051707;response to other organism;0.0452516617023107!GO:0004221;ubiquitin thiolesterase activity;0.0453748845606596!GO:0004540;ribonuclease activity;0.0456365074428498!GO:0000305;response to oxygen radical;0.0463018676099437!GO:0045926;negative regulation of growth;0.0480436991606489!GO:0045893;positive regulation of transcription, DNA-dependent;0.0484184558699728!GO:0030693;caspase activity;0.0494943287790671!GO:0008250;oligosaccharyl transferase complex;0.04989808568528
 |sample_id=11788
 |sample_note=
@@ Line 75: / Line 100: @@
 |sample_tissue=blood
 |top_motifs=NFIL3:2.68422444297;SPIB:2.59691480335;SPI1:2.40845387962;CEBPA,B_DDIT3:2.32829965322;MAFB:2.28829319847;ETS1,2:2.18447159891;ATF5_CREB3:2.10386308795;PAX2:1.89878970228;RUNX1..3:1.83716487262;HIF1A:1.81829940877;NANOG{mouse}:1.75327691879;IRF1,2:1.74709548767;CREB1:1.6981258258;EP300:1.63787046123;DMAP1_NCOR{1,2}_SMARC:1.60235027352;FOXP3:1.57172316205;ATF4:1.55638987294;ELF1,2,4:1.55307455706;HLF:1.52166279593;IRF7:1.41162444678;SREBF1,2:1.39131322561;TLX2:1.32681185693;FOXN1:1.32417151968;ESRRA:1.29481440354;RXRA_VDR{dimer}:1.18931666475;NFE2L2:1.14233459531;HMX1:1.13693649816;TGIF1:1.13122280404;RFX2..5_RFXANK_RFXAP:1.080748349;NFKB1_REL_RELA:1.04764338582;FOSL2:0.913935578784;NFE2L1:0.882295541778;FOXO1,3,4:0.78767927867;JUN:0.761842099058;BACH2:0.681536813199;HMGA1,2:0.658611109941;NR6A1:0.603508812108;FOX{D1,D2}:0.582456079691;ATF2:0.579109837398;FOS_FOS{B,L1}_JUN{B,D}:0.573697820278;NFE2:0.558120098217;TAL1_TCF{3,4,12}:0.525574056934;GLI1..3:0.498473368289;HOXA9_MEIS1:0.466946738478;ATF6:0.448219152641;NR1H4:0.447742389225;HBP1_HMGB_SSRP1_UBTF:0.386389402101;STAT2,4,6:0.383349148307;FOXA2:0.294318239989;FOX{F1,F2,J1}:0.273913127715;BPTF:0.239278448403;NANOG:0.222177491131;NKX2-2,8:0.216164883868;NFIX:0.175123235207;FOX{I1,J2}:0.169486151971;PPARG:0.157353498099;ALX4:0.14541704259;ESR1:0.132293446999;OCT4_SOX2{dimer}:0.12325319367;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.113433934139;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.0744616646474;CDX1,2,4:0.0636716133559;AHR_ARNT_ARNT2:0.00142435926047;MYB:-0.0044661733794;TFCP2:-0.0244517345522;TFAP4:-0.0464945726988;MEF2{A,B,C,D}:-0.0864242687243;ALX1:-0.0952385267232;XBP1:-0.103161268918;GATA4:-0.107859678699;PAX3,7:-0.144420510973;EN1,2:-0.151329146308;HNF4A_NR2F1,2:-0.170794894906;FOXP1:-0.192825492502;T:-0.216654375295;PITX1..3:-0.217507736818;HES1:-0.227914950575;RORA:-0.259796147197;STAT5{A,B}:-0.263408138174;FOXD3:-0.276225250335;ZNF148:-0.283665767354;STAT1,3:-0.350321861861;RXR{A,B,G}:-0.377276911921;FOXQ1:-0.378092980105;PAX8:-0.39034970469;GATA6:-0.390793150541;SOX2:-0.401244272572;VSX1,2:-0.416314047984;ZBTB16:-0.427191398499;EBF1:-0.439921177687;SRF:-0.443399670714;NR5A1,2:-0.446138623514;IKZF2:-0.453533162025;PAX5:-0.483833551135;ELK1,4_GABP{A,B1}:-0.491240160483;TFAP2{A,C}:-0.521158220716;MYFfamily:-0.522529487727;TOPORS:-0.523192831695;POU5F1:-0.530660236062;AIRE:-0.564373813204;PAX4:-0.572367757001;CUX2:-0.581312423462;NHLH1,2:-0.618377187788;MTF1:-0.627841591222;MYOD1:-0.633505346395;REST:-0.638938572897;CRX:-0.657598833957;PRRX1,2:-0.657631363645;NKX3-1:-0.663650937671;POU2F1..3:-0.668410590995;HNF1A:-0.670480683935;SP1:-0.672882807124;BREu{core}:-0.673967833748;PRDM1:-0.710584045141;SPZ1:-0.732170916085;RREB1:-0.752897848615;MZF1:-0.776799303285;GCM1,2:-0.777150399776;ZNF238:-0.786721152572;POU1F1:-0.809608659128;PATZ1:-0.819788012047;ZNF423:-0.828182951176;HOX{A5,B5}:-0.839255072289;NR3C1:-0.845727564232;FOXL1:-0.848304175816;RFX1:-0.852240887459;ZEB1:-0.854999227415;SMAD1..7,9:-0.871425612947;SOX{8,9,10}:-0.897376645237;NKX3-2:-0.918163071312;PAX1,9:-0.979815078752;YY1:-0.998913575977;SOX5:-0.999247044643;ARID5B:-0.999385582516;PBX1:-1.00126849138;NFATC1..3:-1.02034584681;ZFP161:-1.02267419969;MTE{core}:-1.02864299889;GZF1:-1.03539363415;MED-1{core}:-1.08439702657;PDX1:-1.09402656392;DBP:-1.10503950226;EGR1..3:-1.10646886662;NKX2-1,4:-1.11139801461;HSF1,2:-1.11994054352;AR:-1.12431853626;HOX{A6,A7,B6,B7}:-1.13409885799;NKX2-3_NKX2-5:-1.14840814992;NKX6-1,2:-1.15047537127;E2F1..5:-1.16104792779;KLF4:-1.16518715101;IKZF1:-1.20706656028;ADNP_IRX_SIX_ZHX:-1.21623002309;PAX6:-1.22341687914;TBX4,5:-1.24654466633;MAZ:-1.24802163015;GTF2I:-1.25245597572;ZIC1..3:-1.25612007534;TFAP2B:-1.26072310852;TBP:-1.26759571282;NFY{A,B,C}:-1.26913836371;HIC1:-1.27292237354;SNAI1..3:-1.27743070654;TLX1..3_NFIC{dimer}:-1.27762515181;TEF:-1.28874741489;ZBTB6:-1.29121715341;LMO2:-1.35142614672;NRF1:-1.35501389868;TP53:-1.37696836384;GTF2A1,2:-1.37857870673;LHX3,4:-1.38122566016;HAND1,2:-1.38391270624;RBPJ:-1.418483387;LEF1_TCF7_TCF7L1,2:-1.52278926838;TEAD1:-1.55778316139;EVI1:-1.59070076093;FOXM1:-1.59646727252;HOX{A4,D4}:-1.6003669906;GFI1B:-1.60196468777;UFEwm:-1.60374238644;ZNF143:-1.61236578486;XCPE1{core}:-1.63525959975;TFDP1:-1.71918479149;bHLH_family:-1.77095767329;MYBL2:-1.82105293811;ZNF384:-1.86947743137;GFI1:-1.89185267225;ONECUT1,2:-1.95612335079;CDC5L:-1.99792382966;SOX17:-2.03672259215;POU6F1:-2.13502984114;POU3F1..4:-2.45735864161
+|xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11788-124B6;search_select_hide=table117:FF:11788-124B6
 }}

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FF:11788-124B6: Difference between revisions

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Latest revision as of 18:20, 4 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0