FF:11351-117H1: Difference between revisions
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{{f5samples | {{f5samples | ||
|DRA_sample_Accession=CAGE@SAMD00004896 | |||
|DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00004896 | |||
|accession_numbers=CAGE;DRX008339;DRR009211;DRZ000636;DRZ002021;DRZ011986;DRZ013371 | |||
|accession_numbers_RNASeq=sRNA-Seq;DRX037257;DRR041623;DRZ007265 | |||
|ancestors_in_anatomy_facet= | |ancestors_in_anatomy_facet= | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000075,CL:0000066,CL:0002371,CL:0000325,CL:0000147,CL:0000710,CL:0000255,CL:0002077,CL:0000148,CL:0002567 | ||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000090 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr22:38380543..38380569,-!p1@SOX10!3.01!1026.82!SOX10;;chr3:69985734..69985749,+!p2@MITF!2.34!219.20!MITF;;chr6:391743..391759,+!p1@IRF4!2.31!202.79!IRF4;;chr6:10415276..10415341,-!p2@TFAP2A!2.30!240.30!TFAP2A;;chr19:3574330..3574393,+!p2@HMG20B!2.29!192.24!HMG20B;;chr2:223163706..223163730,-!p1@PAX3!2.19!153.55!PAX3;;chr6:10412600..10412637,-!p1@TFAP2A!2.06!182.86!TFAP2A;;chr19:3574157..3574180,+!p4@HMG20B!1.92!82.05!HMG20B;;chr15:42749722..42749739,-!p2@ZFP106!1.85!121.91!ZFP106;;chr19:3574400..3574430,+!p6@HMG20B!1.81!63.30!HMG20B;;chr6:10415484..10415508,-!p3@TFAP2A!1.80!62.13!TFAP2A;;chr17:59477233..59477263,+!p1@TBX2!1.64!128.94!TBX2;;chr8:72756637..72756664,-!p3@MSC!1.60!43.37!MSC;;chr2:239148671..239148686,-!p1@HES6!1.59!134.80!HES6;;chr17:59477275..59477286,+!p3@TBX2!1.59!50.40!TBX2;;chr12:26277817..26277863,-!p2@BHLHE41!1.56!46.89!BHLHE41;;chr6:10412392..10412409,-!p4@TFAP2A!1.50!35.17!TFAP2A;;chr1:25256756..25256774,-!p1@RUNX3!1.46!51.58!RUNX3;;chr6:10415263..10415274,-!p8@TFAP2A!1.39!23.44!TFAP2A;;chr6:10412576..10412599,-!p5@TFAP2A!1.37!22.27!TFAP2A;;chr11:125034640..125034655,+!p1@PKNOX2!1.32!19.93!PKNOX2;;chr8:72756267..72756296,-!p4@MSC!1.31!28.13!MSC;;chr19:3574468..3574478,+!p19@HMG20B!1.27!17.58!HMG20B;;chr20:55204351..55204377,+!p1@TFAP2C!1.25!21.10!TFAP2C;;chr17:46806067..46806097,-!p1@HOXB13!1.24!16.41!HOXB13;;chr11:125034605..125034636,+!p2@PKNOX2!1.21!15.24!PKNOX2;;chr20:50179368..50179392,-!p2@NFATC2!1.19!18.75!NFATC2;;chr9:102584262..102584276,+!p1@NR4A3!1.15!29.30!NR4A3;;chr3:185826855..185826911,-!p1@ETV5!1.14!348.14!ETV5;;chr16:67198683..67198698,+!p2@HSF4!1.14!12.89!HSF4;;chr17:46806035..46806059,-!p2@HOXB13!1.14!12.89!HOXB13;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.14!12.89!HOXC5;;chr12:26277956..26277980,-!p1@BHLHE41!1.10!42.20!BHLHE41;;chr17:59477197..59477212,+!p2@TBX2!1.10!19.93!TBX2;;chr2:177053386..177053402,+!p1@HOXD1!1.10!11.72!HOXD1;;chr1:63788229..63788250,+!p1@FOXD3!1.10!11.72!FOXD3;;chr5:321810..321877,+!p1@AHRR!1.09!36.34!AHRR;;chr6:10412477..10412490,-!p10@TFAP2A!1.06!10.55!TFAP2A;;chr19:3576938..3576962,+!p9@HMG20B!1.06!10.55!HMG20B;;chr22:41721853..41721874,+!p6@ZC3H7B!1.06!10.55!ZC3H7B;;chr8:128748308..128748324,+!p2@MYC!1.03!275.46!MYC;;chr8:72756667..72756736,-!p2@MSC!1.03!15.24!MSC;;chr12:54447599..54447630,+!p3@HOXC4!1.02!11.72!HOXC4;;chr2:145271342..145271377,-!p5@ZEB2!1.02!9.38!ZEB2;;chr16:67198633..67198671,+!p1@HSF4!1.02!9.38!HSF4;;chr17:59477266..59477273,+!p6@TBX2!1.02!9.38!TBX2;;chr19:3572689..3572697,+!p22@HMG20B!1.02!9.38!HMG20B;;chr19:3572925..3573014,+!p1@HMG20B!1.01!275.46!HMG20B;;chr8:72756063..72756125,-!p1@MSC!1.01!18.75!MSC;;chr2:145277640..145277771,-!p1@ZEB2!1.00!124.25!ZEB2;;chr8:37553261..37553282,+!p2@ZNF703!0.97!65.64!ZNF703;;chr17:41623692..41623715,-!p1@ETV4!0.97!36.34!ETV4;;chr19:3572758..3572795,+!p7@HMG20B!0.96!8.21!HMG20B;;chr3:69985792..69985803,+!p7@MITF!0.96!8.21!MITF;;chr1:2461692..2461710,-!p1@HES5!0.96!8.21!HES5;;chr1:25256439..25256476,-!p3@RUNX3!0.96!8.21!RUNX3;;chr12:54393880..54393962,+!p1@HOXC9!0.96!8.21!HOXC9;;chr2:145277882..145277967,-!p3@ZEB2!0.95!14.07!ZEB2;;chr9:102584159..102584174,+!p2@NR4A3!0.94!14.07!NR4A3;;chr11:615570..615721,-!p2@IRF7!0.93!15.24!IRF7;;chr1:204042233..204042249,+!p1@SOX13!0.92!48.06!SOX13;;chr19:35759824..35759891,+!p1@USF2!0.91!233.26!USF2;;chr19:35759976..35760042,+!p4@USF2!0.91!38.68!USF2;;chr8:128750654..128750793,+!p3@MYC!0.90!29.30!MYC;;chr8:72755987..72756002,-!p7@MSC!0.90!7.03!MSC;;chr12:54378923..54378966,+!p1@HOXC10!0.90!7.03!HOXC10;;chr12:54380036..54380091,+!p4@HOXC10!0.90!7.03!HOXC10;;chr12:85673868..85673881,+!p2@ALX1!0.90!7.03!ALX1;;chr2:176994408..176994492,+!p1@HOXD8!0.90!7.03!HOXD8;;chrY:21906594..21906622,-!p1@KDM5D!0.90!7.03!KDM5D;;chr8:37553292..37553317,+!p1@ZNF703!0.89!169.97!ZNF703;;chr17:40440481..40440550,+!p1@STAT5A!0.89!51.58!STAT5A;;chr16:30583017..30583064,-!p1@ZNF688!0.88!35.17!ZNF688;;chr12:26277929..26277955,-!p3@BHLHE41!0.87!9.38!BHLHE41;;chr19:3573282..3573289,+!p5@HMG20B!0.87!8.21!HMG20B;;chr8:49833978..49833996,-!p1@SNAI2!0.86!134.80!SNAI2;;chr20:32274150..32274166,-!p2@E2F1!0.85!11.72!E2F1;;chr20:50179584..50179611,-!p6@NFATC2!0.84!5.86!NFATC2;;chr6:10412262..10412271,-!p21@TFAP2A!0.84!5.86!TFAP2A;;chr8:72756380..72756427,-!p8@MSC!0.84!5.86!MSC;;chr8:72756522..72756533,-!p13@MSC!0.84!5.86!MSC;;chr9:16728047..16728061,-!p8@BNC2!0.84!5.86!BNC2;;chr16:54320280..54320291,-!p9@IRX3!0.84!5.86!IRX3;;chr17:46806016..46806029,-!p5@HOXB13!0.84!5.86!HOXB13;;chr12:54447637..54447659,+!p4@HOXC4!0.84!5.86!HOXC4;;chr12:85674018..85674039,+!p3@ALX1!0.84!5.86!ALX1;;chr20:306177..306211,+!p2@SOX12!0.83!42.20!SOX12;;chr19:36134528..36134563,+!p1@ETV2!0.83!17.58!ETV2;;chr11:64764435..64764449,-!p1@BATF2!0.83!8.21!BATF2;;chr8:72756023..72756055,-!p6@MSC!0.82!7.03!MSC;;chr12:53614115..53614154,-!p1@RARG!0.81!31.65!RARG;;chr2:71127699..71127744,+!p1@VAX2!0.81!11.72!VAX2;;chr1:204042723..204042784,+!p3@SOX13!0.81!9.38!SOX13;;chr16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| |||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000066;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000133;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000147;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000148;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000221;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000710;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002077;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002567 | |||
|ffid_belonging_in_development=CL:0000133,CL:0000221 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
Line 34: | Line 44: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Melanocyte%2520-%2520light%252c%2520donor2.CNhs11383.11351-117H1.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Melanocyte%2520-%2520light%252c%2520donor2.CNhs11383.11351-117H1.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Melanocyte%2520-%2520light%252c%2520donor2.CNhs11383.11351-117H1.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Melanocyte%2520-%2520light%252c%2520donor2.CNhs11383.11351-117H1.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Melanocyte%2520-%2520light%252c%2520donor2.CNhs11383.11351-117H1.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11351-117H1 | |id=FF:11351-117H1 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000090 | ||
|is_obsolete= | |||
|library_id=CNhs11383 | |||
|library_id_phase_based=2:CNhs11383 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11351 | |||
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10015.AGTTCC.11351 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11351 | |||
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10015.AGTTCC.11351 | |||
|name=Melanocyte - light, donor2 | |name=Melanocyte - light, donor2 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
Line 41: | Line 65: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11383,LSID771,release012,COMPLETED | |profile_hcage=CNhs11383,LSID771,release012,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=SRhi10015,,, | |profile_srnaseq=SRhi10015,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0,0,0,-0.160318030086386,0,0.933177576300379,-0.282403560576942,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183571695111352,0,0,0,0,0,-0.0979578962680575,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,0,0,0.508904549245099,0,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0,0,0.0270532955604765,0,-0.0969923612426051,0,0,-0.097343627213097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263658702260338,-0.042750049965979,0,0,0,0,-0.0980353512377064,-0.138477200800895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.096373593922461,0,0,0,0.603210661571703,0.847063562568907,0,0,0,0,0,0 | |||
|repeat_enrich_byname=0,0,0,0,-0.0980353512377064,0,0,0,0,0,0,0,0,0,0,0,0.089715830174215,0.212968827883652,-0.137191513292229,-0.143515142523472,0,0,-0.0998769538040145,0,0,0,0,0,0,0,0,0,-0.128119866952565,0,-0.0504125515893149,0,0,0,0,-0.0186252810838506,-0.305472230898407,0,-0.17425806114951,-0.0683442610773682,0,0,0,0,0.225608816501121,0,0.216015221666039,-0.0827201683234173,0,-0.139281183722808,-0.04680465889238,0,0,0,0.15937355104318,-0.0543446794603907,0,0,0.618972719437045,0.768122963712033,0,0,-0.0541498760918552,0,0.114716296709264,0.0737274838877485,0,-0.043744846574249,0,0,0,0,0,0,0,0,0,0,0,-0.0574934668214365,-0.326988596678969,-0.0304099808375785,0,0,0,0.303891179708137,0,0,-0.0363914504967874,0.0672627289749186,0,0.180351495975624,0,-0.302389727009913,0.418742978500586,-0.485688169373131,0.299927354356912,-0.147401849371139,0.146912985909932,0,0.226518019268488,0.3917280339796,0.089318791981331,-0.051574311040921,0,0.543901314142442,0.0554723357415836,0,0,0.0909848338849536,-0.240832202491167,0,-0.135140827237995,0.61443196214565,-0.0130187659766275,0.495744189623229,0.36375076357366,0.272318726103349,-0.125533096438955,0.128914824273219,0.447443846007765,0.0666899992964445,-0.25312497217381,0.0199641203100733,0,0.0921010650834015,-0.0635610801648158,-0.26160052236106,-0.0915145884324169,0,-0.147082756351201,1.44552177517252,0.17474726396715,0.373566961425225,-0.036651179834273,0,0,0.0760270353397002,0,0,0,0,0,0.37022351795406,0.476596237296824,-0.232855561555545,0,0.0228465182695716,0,-0.297286080352587,0,0.172143706928865,-0.0928171086980132,0,0.224440446628686,0,0.387571222535122,-0.0418576027370011,0.0686847138350115,-0.085500099931958,0.696566043344783,-0.393577228315952,0.127998688047571,0.263658702260338,-0.134135598579114,0.055196081666746,-0.0881268324752877,0.029882579092386,-0.0471654107204836,0.0755147385350843,-0.0140631328556163,0.131066037595739,0,0.0901579419965,0,0.0569370602553154,0,0.440740138579427,0.114370514737872,0.085022210165576,-0.562768906265481,0,0.119444555840441,-0.788130937773974,0,0.0991964490823183,0,0,-0.150367083334639,0.266338267419915,0.284199057970857,0.029457896050695,0,0.0462991814082399,0,0.336894705459779,-0.07352403458707,-0.235476037764389,0,0.282560863206849,0.453362910534092,0.300664257709065,0.220923632024845,0,0,0.595109473927568,0,0,0.536896704875297,-0.0636048451378017,0.442782500788855,-0.253326341486756,0,-0.108622809454255,0,0,-0.177527765965176,0,0.0994937823196835,0,0,0.0122744957743075,-0.116628112990133,0,0,0,-0.150150361687855,0,0,0,0,0,0,0,-0.797635330512876,-0.354833330216448,0,0.414615191341655,0,0,0,0,0,0,0,0,-0.296658387317809,0.0458564539659975,0.713361924121476,0,0,0,0,-0.215723402553475,-0.203236562094724,0,-0.131862706497632,0,0,0,0,-0.0861409897892114,0,0,0,0,-0.057730457053664,0.286335457614855,0,0,0,-0.27695440160179,0,0,0,0,-0.23762627487354,0,0,0,0,0.0522390053610944,0.255312825912938,0,-0.316534143030056,-0.19005012473582,0.188366595249932,0,0,-0.261347131789888,0,0,-0.699049616173468,0,0,-0.0209247759461169,0,0,0,0,0,0,-0.214314512399756,0,0,0,0,0,0,0,0,0,0,0,-0.213115378094194,0.244670648801269,-0.0640596705171081,0,0,0,0,0,0,-0.0241060230789031,-0.726993749846053,0,0,0,0,0,0,0,0,-0.471425939663242,0,0,0,0,0,-0.0969923612426051,0,0,0,0,-0.564807121153884,0,0,0.933177576300379,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.123319086035448,1.11236346502485,0,0,0,0,0,0,0,0.480179571950518,0,0,0,0,-0.113884373708977,0,0,0,-0.104796384789156,0,-0.160318030086386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.00869221718339142,0,0.49170620205939,0.209377293376538,0,0,-0.232628352633041,0,0,0,0,0,0,-0.031340424028527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0962259712900034,0,0,0,0,0,0,0,-0.0979578962680575,0,0,-0.0920328098005262,0,0,0,0,0,0,0.0394252924488465,0.134969270075801,0.0908585643443992,0,0,0,-0.054385572482455,0,0,0.0399867015694558,0,-0.0667773874189013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183571695111352,0,0,0,0,0,0,0,0,0,0,0,0.16844735272989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0340113632754165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0800184682686384,0,0,0,-0.213086229657044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.69911780967203,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0482220752390542,0,-0.0843766322300271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.550504042515712,0,0,0,0,-0.0476371106609188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.253610608288505,0,0,0.177821007112491,0,0,0,0,0,0,0,0,0,0,0,0,0.593484087060986,0,0,0,0,0,0,0,0,0,0,-0.0484300422256687,0,0,0,0,0,0,0,0,0.654804266211112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.654526068111823,0.847063562568907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.354724076107398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0296969223726757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| |||
|rna_box=117 | |rna_box=117 | ||
|rna_catalog_number=CA104-R10n | |rna_catalog_number=CA104-R10n | ||
Line 55: | Line 82: | ||
|rna_tube_id=117H1 | |rna_tube_id=117H1 | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|rnaseq_library_id=SRhi10015.AGTTCC | |||
|sample_age=Neonatal | |sample_age=Neonatal | ||
|sample_category=primary cells | |||
|sample_cell_catalog=N/A | |sample_cell_catalog=N/A | ||
|sample_cell_line= | |sample_cell_line= | ||
Line 68: | Line 97: | ||
|sample_ethnicity=C | |sample_ethnicity=C | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.31213987300824e-217!GO:0005737;cytoplasm;7.75975418256628e-200!GO:0043231;intracellular membrane-bound organelle;4.03545808378495e-179!GO:0043227;membrane-bound organelle;7.52830760099119e-179!GO:0043226;organelle;3.00277636936589e-175!GO:0043229;intracellular organelle;6.82286026654533e-175!GO:0044444;cytoplasmic part;1.88582386800024e-153!GO:0044422;organelle part;2.94597581267745e-136!GO:0044446;intracellular organelle part;4.49362752667544e-135!GO:0032991;macromolecular complex;1.37595599158487e-82!GO:0044237;cellular metabolic process;6.19163622598174e-81!GO:0044238;primary metabolic process;1.70544239774757e-79!GO:0005739;mitochondrion;1.28531338590017e-76!GO:0043170;macromolecule metabolic process;3.59327402796813e-64!GO:0030529;ribonucleoprotein complex;1.68367550125421e-61!GO:0043233;organelle lumen;2.818272386212e-61!GO:0031974;membrane-enclosed lumen;2.818272386212e-61!GO:0031090;organelle membrane;6.59777835321601e-60!GO:0005515;protein binding;2.09888999680605e-54!GO:0044428;nuclear part;5.70813776051975e-53!GO:0044429;mitochondrial part;1.04694164314917e-51!GO:0005634;nucleus;2.5107406981227e-51!GO:0003723;RNA binding;7.03296873791988e-48!GO:0009058;biosynthetic process;7.89984237287994e-46!GO:0043234;protein complex;1.72964497772948e-45!GO:0019538;protein metabolic process;5.27933934498664e-45!GO:0031967;organelle envelope;6.14333990114145e-43!GO:0031975;envelope;1.4208986118543e-42!GO:0015031;protein transport;1.80275894701333e-42!GO:0005840;ribosome;1.08048502292578e-41!GO:0044260;cellular macromolecule metabolic process;2.41822908482111e-41!GO:0033036;macromolecule localization;5.06179268487494e-41!GO:0044267;cellular protein metabolic process;2.50337822748939e-40!GO:0006412;translation;4.09670470159021e-40!GO:0008104;protein localization;3.12667952674329e-39!GO:0044249;cellular biosynthetic process;1.86388193365441e-38!GO:0045184;establishment of protein localization;2.0081017540314e-38!GO:0009059;macromolecule biosynthetic process;3.7993289044062e-37!GO:0003735;structural constituent of ribosome;1.84564077268114e-36!GO:0016043;cellular component organization and biogenesis;5.21940337009247e-36!GO:0005740;mitochondrial envelope;4.6823753863113e-35!GO:0048770;pigment granule;1.28809066895586e-34!GO:0042470;melanosome;1.28809066895586e-34!GO:0043283;biopolymer metabolic process;2.53690544173741e-33!GO:0005829;cytosol;2.61988660040963e-33!GO:0006396;RNA processing;3.25442156365722e-33!GO:0031966;mitochondrial membrane;4.15753023003328e-33!GO:0031981;nuclear lumen;4.34798488200321e-33!GO:0006996;organelle organization and biogenesis;5.97919146403464e-33!GO:0033279;ribosomal subunit;3.70994241864612e-32!GO:0019866;organelle inner membrane;5.2450060228576e-32!GO:0046907;intracellular transport;2.04119980922948e-31!GO:0005743;mitochondrial inner membrane;2.98968763567727e-30!GO:0006259;DNA metabolic process;1.54744394683305e-28!GO:0006886;intracellular protein transport;1.02322644309722e-27!GO:0065003;macromolecular complex assembly;1.77243485965421e-26!GO:0043228;non-membrane-bound organelle;1.94597631126231e-25!GO:0043232;intracellular non-membrane-bound organelle;1.94597631126231e-25!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.32892138649095e-24!GO:0000166;nucleotide binding;7.02115822175873e-24!GO:0016071;mRNA metabolic process;1.06903145055176e-23!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.80810736410777e-23!GO:0022607;cellular component assembly;4.60974246496543e-23!GO:0006119;oxidative phosphorylation;5.7492207117081e-23!GO:0012505;endomembrane system;1.14887977572438e-22!GO:0016462;pyrophosphatase activity;2.00058582769452e-21!GO:0016817;hydrolase activity, acting on acid anhydrides;2.41410819469609e-21!GO:0031980;mitochondrial lumen;2.52896043240086e-21!GO:0005759;mitochondrial matrix;2.52896043240086e-21!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.80448520665404e-21!GO:0051649;establishment of cellular localization;3.80346926955084e-21!GO:0051641;cellular localization;7.05533351022687e-21!GO:0010467;gene expression;7.87047133650095e-21!GO:0017111;nucleoside-triphosphatase activity;1.66144609425583e-20!GO:0006397;mRNA processing;1.8891088931846e-20!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.38091798236852e-20!GO:0051186;cofactor metabolic process;3.27901153453347e-20!GO:0008380;RNA splicing;5.04976793231188e-20!GO:0016874;ligase activity;5.80413831847498e-20!GO:0044445;cytosolic part;8.15496804566185e-20!GO:0005654;nucleoplasm;8.62855002973229e-20!GO:0044455;mitochondrial membrane part;1.3692453403316e-19!GO:0032553;ribonucleotide binding;4.22162237363382e-19!GO:0032555;purine ribonucleotide binding;4.22162237363382e-19!GO:0017076;purine nucleotide binding;7.03926598500518e-19!GO:0007049;cell cycle;1.09468242787007e-18!GO:0005783;endoplasmic reticulum;1.8159399392716e-18!GO:0005524;ATP binding;5.68648269068063e-18!GO:0032559;adenyl ribonucleotide binding;1.17750279171188e-17!GO:0005746;mitochondrial respiratory chain;1.48105699837247e-17!GO:0006512;ubiquitin cycle;2.06462856905581e-17!GO:0030554;adenyl nucleotide binding;3.52272263088759e-17!GO:0015935;small ribosomal subunit;3.93810900308699e-17!GO:0005794;Golgi apparatus;6.59566150554119e-17!GO:0008134;transcription factor binding;1.11698882436701e-16!GO:0044451;nucleoplasm part;1.70070223952862e-16!GO:0015934;large ribosomal subunit;4.91263859418956e-16!GO:0043412;biopolymer modification;5.36333871990372e-16!GO:0044248;cellular catabolic process;1.10666175523832e-15!GO:0022402;cell cycle process;1.38508798256194e-15!GO:0044432;endoplasmic reticulum part;1.84242072234968e-15!GO:0005681;spliceosome;2.38210100211082e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;3.4044720104918e-15!GO:0006732;coenzyme metabolic process;3.85013406302774e-15!GO:0006457;protein folding;7.16605144511473e-15!GO:0050136;NADH dehydrogenase (quinone) activity;7.60558195407135e-15!GO:0003954;NADH dehydrogenase activity;7.60558195407135e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;7.60558195407135e-15!GO:0044265;cellular macromolecule catabolic process;8.00811761596368e-15!GO:0006464;protein modification process;1.86184563092687e-14!GO:0006605;protein targeting;2.67287234283121e-14!GO:0005730;nucleolus;3.11681427317077e-14!GO:0006325;establishment and/or maintenance of chromatin architecture;4.10602623935654e-14!GO:0051276;chromosome organization and biogenesis;5.55037190257509e-14!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.06973326939049e-13!GO:0000278;mitotic cell cycle;1.56433385504927e-13!GO:0009057;macromolecule catabolic process;1.95770547829645e-13!GO:0042623;ATPase activity, coupled;2.52259323955047e-13!GO:0006323;DNA packaging;2.64124987908552e-13!GO:0042775;organelle ATP synthesis coupled electron transport;3.8549380876224e-13!GO:0042773;ATP synthesis coupled electron transport;3.8549380876224e-13!GO:0030964;NADH dehydrogenase complex (quinone);4.18565906045385e-13!GO:0045271;respiratory chain complex I;4.18565906045385e-13!GO:0005747;mitochondrial respiratory chain complex I;4.18565906045385e-13!GO:0043285;biopolymer catabolic process;4.62408479400061e-13!GO:0051603;proteolysis involved in cellular protein catabolic process;4.72452740451208e-13!GO:0019941;modification-dependent protein catabolic process;6.06851953295964e-13!GO:0043632;modification-dependent macromolecule catabolic process;6.06851953295964e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);7.88969086616479e-13!GO:0044257;cellular protein catabolic process;9.77972409080554e-13!GO:0016887;ATPase activity;1.08148903139777e-12!GO:0005773;vacuole;1.31288762296597e-12!GO:0006511;ubiquitin-dependent protein catabolic process;1.32928072506115e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.48393966744085e-12!GO:0000502;proteasome complex (sensu Eukaryota);1.86661573643039e-12!GO:0006974;response to DNA damage stimulus;4.48637073356225e-12!GO:0005761;mitochondrial ribosome;7.3084302161613e-12!GO:0000313;organellar ribosome;7.3084302161613e-12!GO:0051082;unfolded protein binding;1.77026301067462e-11!GO:0022618;protein-RNA complex assembly;2.07079290327473e-11!GO:0005789;endoplasmic reticulum membrane;2.22369614660231e-11!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.30637745394675e-11!GO:0003712;transcription cofactor activity;2.34219270908418e-11!GO:0000323;lytic vacuole;2.34676535937161e-11!GO:0005764;lysosome;2.34676535937161e-11!GO:0042175;nuclear envelope-endoplasmic reticulum network;2.48100196492348e-11!GO:0016023;cytoplasmic membrane-bound vesicle;3.11732754890402e-11!GO:0016740;transferase activity;3.1226842883443e-11!GO:0030163;protein catabolic process;3.43912660515641e-11!GO:0031988;membrane-bound vesicle;4.64848568646275e-11!GO:0016192;vesicle-mediated transport;5.67168414801899e-11!GO:0043687;post-translational protein modification;5.98908089812867e-11!GO:0005694;chromosome;6.3157947117671e-11!GO:0044427;chromosomal part;8.70690116223851e-11!GO:0003676;nucleic acid binding;9.85775221633496e-11!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.12860640387405e-10!GO:0005768;endosome;1.19455167033205e-10!GO:0008639;small protein conjugating enzyme activity;1.35440339687893e-10!GO:0008135;translation factor activity, nucleic acid binding;1.35440339687893e-10!GO:0006399;tRNA metabolic process;1.48404398478969e-10!GO:0009259;ribonucleotide metabolic process;1.55871897786882e-10!GO:0031982;vesicle;1.61101310910084e-10!GO:0016787;hydrolase activity;1.6271408914133e-10!GO:0031410;cytoplasmic vesicle;1.69932910276362e-10!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.73671209698878e-10!GO:0009056;catabolic process;2.89122509487413e-10!GO:0004842;ubiquitin-protein ligase activity;2.95769165542869e-10!GO:0006163;purine nucleotide metabolic process;3.26666401549384e-10!GO:0009150;purine ribonucleotide metabolic process;3.51927054141546e-10!GO:0051188;cofactor biosynthetic process;4.26269684199159e-10!GO:0022403;cell cycle phase;4.96459254318572e-10!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;5.34982315790684e-10!GO:0006333;chromatin assembly or disassembly;6.28445835150991e-10!GO:0008565;protein transporter activity;6.85326918214651e-10!GO:0019787;small conjugating protein ligase activity;9.29779902368368e-10!GO:0051726;regulation of cell cycle;9.37345496299286e-10!GO:0006281;DNA repair;9.86785896329921e-10!GO:0009199;ribonucleoside triphosphate metabolic process;1.25272006478502e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.3030487226599e-09!GO:0005635;nuclear envelope;1.68658834751151e-09!GO:0009205;purine ribonucleoside triphosphate metabolic process;2.03895046697307e-09!GO:0009144;purine nucleoside triphosphate metabolic process;2.03895046697307e-09!GO:0009141;nucleoside triphosphate metabolic process;2.14601757694628e-09!GO:0042254;ribosome biogenesis and assembly;2.27136992477457e-09!GO:0015078;hydrogen ion transmembrane transporter activity;2.33410509502115e-09!GO:0000087;M phase of mitotic cell cycle;2.46086926021289e-09!GO:0007067;mitosis;2.54996213507141e-09!GO:0000074;regulation of progression through cell cycle;2.92306610519759e-09!GO:0046034;ATP metabolic process;3.19061531928149e-09!GO:0016491;oxidoreductase activity;3.20284133601104e-09!GO:0016881;acid-amino acid ligase activity;3.21219372160462e-09!GO:0000785;chromatin;3.36820705981112e-09!GO:0048193;Golgi vesicle transport;4.23566747354046e-09!GO:0009117;nucleotide metabolic process;4.23566747354046e-09!GO:0006164;purine nucleotide biosynthetic process;4.40917343373783e-09!GO:0015986;ATP synthesis coupled proton transport;4.47908446475767e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;4.47908446475767e-09!GO:0009152;purine ribonucleotide biosynthetic process;4.71381190764484e-09!GO:0016568;chromatin modification;5.48835231129375e-09!GO:0009260;ribonucleotide biosynthetic process;5.96826352190644e-09!GO:0009055;electron carrier activity;6.24457420005883e-09!GO:0009060;aerobic respiration;7.93385177595933e-09!GO:0031965;nuclear membrane;8.20704653188681e-09!GO:0045333;cellular respiration;8.20704653188681e-09!GO:0006913;nucleocytoplasmic transport;8.252519701226e-09!GO:0019829;cation-transporting ATPase activity;8.3748238005281e-09!GO:0044453;nuclear membrane part;1.42268675940396e-08!GO:0000398;nuclear mRNA splicing, via spliceosome;1.44698485445548e-08!GO:0000375;RNA splicing, via transesterification reactions;1.44698485445548e-08!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.44698485445548e-08!GO:0065004;protein-DNA complex assembly;1.55219377760692e-08!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.56039402701787e-08!GO:0004812;aminoacyl-tRNA ligase activity;1.56039402701787e-08!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.56039402701787e-08!GO:0051169;nuclear transport;1.95002373022683e-08!GO:0006461;protein complex assembly;2.08536675390944e-08!GO:0009142;nucleoside triphosphate biosynthetic process;2.35607042052719e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.35607042052719e-08!GO:0009719;response to endogenous stimulus;2.54835000203001e-08!GO:0006334;nucleosome assembly;2.89038194555031e-08!GO:0016469;proton-transporting two-sector ATPase complex;3.05541745915245e-08!GO:0031497;chromatin assembly;3.21132130413448e-08!GO:0043038;amino acid activation;3.52946096187617e-08!GO:0006418;tRNA aminoacylation for protein translation;3.52946096187617e-08!GO:0043039;tRNA aminoacylation;3.52946096187617e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;3.73042684957521e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;3.73042684957521e-08!GO:0015630;microtubule cytoskeleton;4.40769387804695e-08!GO:0006260;DNA replication;4.51969331493932e-08!GO:0044431;Golgi apparatus part;5.08637867408689e-08!GO:0006754;ATP biosynthetic process;5.22213177510314e-08!GO:0006753;nucleoside phosphate metabolic process;5.22213177510314e-08!GO:0004386;helicase activity;5.36765601664812e-08!GO:0051301;cell division;6.20240430949199e-08!GO:0006446;regulation of translational initiation;7.89156776380718e-08!GO:0017038;protein import;8.65601483971539e-08!GO:0005770;late endosome;1.36037412227313e-07!GO:0048475;coated membrane;1.36037412227313e-07!GO:0030117;membrane coat;1.36037412227313e-07!GO:0009108;coenzyme biosynthetic process;1.55198275768646e-07!GO:0003743;translation initiation factor activity;1.55394282257981e-07!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.64000091171856e-07!GO:0016772;transferase activity, transferring phosphorus-containing groups;1.97454853249417e-07!GO:0006084;acetyl-CoA metabolic process;2.00542297203159e-07!GO:0000279;M phase;2.16784337317264e-07!GO:0005793;ER-Golgi intermediate compartment;2.70007849313168e-07!GO:0030120;vesicle coat;2.70866905495122e-07!GO:0030662;coated vesicle membrane;2.70866905495122e-07!GO:0006099;tricarboxylic acid cycle;2.74036125906971e-07!GO:0046356;acetyl-CoA catabolic process;2.74036125906971e-07!GO:0006091;generation of precursor metabolites and energy;2.8014149034789e-07!GO:0016604;nuclear body;3.41287999855161e-07!GO:0006413;translational initiation;3.83673740063551e-07!GO:0051187;cofactor catabolic process;4.10818809817983e-07!GO:0044440;endosomal part;4.39853061060252e-07!GO:0010008;endosome membrane;4.39853061060252e-07!GO:0008654;phospholipid biosynthetic process;6.74749303258099e-07!GO:0005643;nuclear pore;6.80512161680781e-07!GO:0009109;coenzyme catabolic process;7.22021284358427e-07!GO:0008026;ATP-dependent helicase activity;8.33959538715256e-07!GO:0006752;group transfer coenzyme metabolic process;8.57331884754192e-07!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;9.22279863724531e-07!GO:0015399;primary active transmembrane transporter activity;9.22279863724531e-07!GO:0065002;intracellular protein transport across a membrane;9.58455573574153e-07!GO:0016070;RNA metabolic process;9.59142397433192e-07!GO:0016779;nucleotidyltransferase activity;1.07941212539353e-06!GO:0032446;protein modification by small protein conjugation;1.26494996935863e-06!GO:0006364;rRNA processing;1.32135186786259e-06!GO:0003713;transcription coactivator activity;1.38807775589011e-06!GO:0005798;Golgi-associated vesicle;1.59988788599415e-06!GO:0016567;protein ubiquitination;1.81352366505982e-06!GO:0007005;mitochondrion organization and biogenesis;1.99479841890551e-06!GO:0031252;leading edge;2.02966471897842e-06!GO:0006793;phosphorus metabolic process;2.40335584131049e-06!GO:0006796;phosphate metabolic process;2.40335584131049e-06!GO:0012501;programmed cell death;2.63516130353148e-06!GO:0046930;pore complex;2.67965028616256e-06!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;2.75542668695752e-06!GO:0006915;apoptosis;2.93729614449124e-06!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;3.23614898537367e-06!GO:0016072;rRNA metabolic process;3.42791553278957e-06!GO:0043492;ATPase activity, coupled to movement of substances;3.6429251421224e-06!GO:0015980;energy derivation by oxidation of organic compounds;3.71988769999218e-06!GO:0042440;pigment metabolic process;4.65232231762009e-06!GO:0044262;cellular carbohydrate metabolic process;4.72411512270057e-06!GO:0005839;proteasome core complex (sensu Eukaryota);4.82390856933015e-06!GO:0048066;pigmentation during development;5.23436327757064e-06!GO:0016563;transcription activator activity;5.23436327757064e-06!GO:0003924;GTPase activity;5.2829220594506e-06!GO:0030659;cytoplasmic vesicle membrane;5.46156916868533e-06!GO:0005774;vacuolar membrane;6.44911195640341e-06!GO:0045786;negative regulation of progression through cell cycle;7.03925900488031e-06!GO:0000139;Golgi membrane;7.39439432906939e-06!GO:0000786;nucleosome;7.90200942718223e-06!GO:0046474;glycerophospholipid biosynthetic process;8.1498668040104e-06!GO:0006650;glycerophospholipid metabolic process;8.33710459504441e-06!GO:0045259;proton-transporting ATP synthase complex;8.74121811079345e-06!GO:0003697;single-stranded DNA binding;9.22397137200577e-06!GO:0046148;pigment biosynthetic process;9.75642826414291e-06!GO:0006643;membrane lipid metabolic process;1.06714938502407e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;1.07385466955964e-05!GO:0005788;endoplasmic reticulum lumen;1.12248483510295e-05!GO:0006366;transcription from RNA polymerase II promoter;1.28753198061144e-05!GO:0008219;cell death;1.38244559689407e-05!GO:0016265;death;1.38244559689407e-05!GO:0046467;membrane lipid biosynthetic process;1.58833195472173e-05!GO:0043623;cellular protein complex assembly;1.6266664669575e-05!GO:0000151;ubiquitin ligase complex;1.77152580559543e-05!GO:0030532;small nuclear ribonucleoprotein complex;1.85382639707831e-05!GO:0044433;cytoplasmic vesicle part;1.86415519664428e-05!GO:0005905;coated pit;1.90243736920446e-05!GO:0043566;structure-specific DNA binding;1.92105705380914e-05!GO:0006082;organic acid metabolic process;2.05775277140958e-05!GO:0044437;vacuolar part;2.24066174852018e-05!GO:0019752;carboxylic acid metabolic process;2.25236682533018e-05!GO:0005667;transcription factor complex;2.54096729905583e-05!GO:0051329;interphase of mitotic cell cycle;2.62255517460557e-05!GO:0016607;nuclear speck;2.76503064826693e-05!GO:0004298;threonine endopeptidase activity;3.03198657379433e-05!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;3.03574972971195e-05!GO:0016310;phosphorylation;3.16295959349701e-05!GO:0006818;hydrogen transport;3.2093434752686e-05!GO:0009165;nucleotide biosynthetic process;3.49073031299733e-05!GO:0008610;lipid biosynthetic process;4.02920764362304e-05!GO:0006916;anti-apoptosis;4.35335778731281e-05!GO:0005765;lysosomal membrane;4.60191899620573e-05!GO:0005769;early endosome;4.64556755151063e-05!GO:0051427;hormone receptor binding;4.69137297376584e-05!GO:0015992;proton transport;5.00298122645387e-05!GO:0051170;nuclear import;5.57584531474889e-05!GO:0005762;mitochondrial large ribosomal subunit;5.95123549437333e-05!GO:0000315;organellar large ribosomal subunit;5.95123549437333e-05!GO:0051325;interphase;7.71790043935565e-05!GO:0006606;protein import into nucleus;7.84648375624215e-05!GO:0012506;vesicle membrane;7.9194051527495e-05!GO:0006888;ER to Golgi vesicle-mediated transport;8.13262171044658e-05!GO:0019899;enzyme binding;8.4488180222286e-05!GO:0003714;transcription corepressor activity;9.2710778647195e-05!GO:0016853;isomerase activity;9.34979196580729e-05!GO:0035257;nuclear hormone receptor binding;9.53613827108514e-05!GO:0046489;phosphoinositide biosynthetic process;9.74311734184973e-05!GO:0051246;regulation of protein metabolic process;0.000116410613058378!GO:0006403;RNA localization;0.000116978551858409!GO:0050657;nucleic acid transport;0.000118034354081361!GO:0051236;establishment of RNA localization;0.000118034354081361!GO:0050658;RNA transport;0.000118034354081361!GO:0005819;spindle;0.000119572483440793!GO:0031902;late endosome membrane;0.000124955218931031!GO:0005813;centrosome;0.000127857571598164!GO:0048471;perinuclear region of cytoplasm;0.000139754085702218!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.000144670719809863!GO:0019843;rRNA binding;0.000148108721750077!GO:0016564;transcription repressor activity;0.000155821099147781!GO:0007040;lysosome organization and biogenesis;0.000156045383510821!GO:0046519;sphingoid metabolic process;0.00016955878954087!GO:0000245;spliceosome assembly;0.000190286119012777!GO:0005815;microtubule organizing center;0.000197215749567662!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.000228551518099548!GO:0065009;regulation of a molecular function;0.00023770420397265!GO:0022890;inorganic cation transmembrane transporter activity;0.000248107395370439!GO:0006672;ceramide metabolic process;0.000271220444345673!GO:0044255;cellular lipid metabolic process;0.000288821297662644!GO:0005048;signal sequence binding;0.000311374403249154!GO:0015631;tubulin binding;0.00032715812567166!GO:0043284;biopolymer biosynthetic process;0.0003405633972636!GO:0042802;identical protein binding;0.000341029413204878!GO:0042981;regulation of apoptosis;0.000344093704783937!GO:0007033;vacuole organization and biogenesis;0.000352117745997113!GO:0003724;RNA helicase activity;0.000370833766518352!GO:0043067;regulation of programmed cell death;0.000375240641883181!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000384710568689575!GO:0048523;negative regulation of cellular process;0.000390009140805333!GO:0003899;DNA-directed RNA polymerase activity;0.000408482210470444!GO:0005874;microtubule;0.000413237589745099!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000449125600807558!GO:0019867;outer membrane;0.000543679274552011!GO:0006644;phospholipid metabolic process;0.000555795931209118!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.000580673700298532!GO:0006509;membrane protein ectodomain proteolysis;0.000636078208977449!GO:0033619;membrane protein proteolysis;0.000636078208977449!GO:0031968;organelle outer membrane;0.00063709042497117!GO:0030118;clathrin coat;0.000643465675320119!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.000676211221150659!GO:0005975;carbohydrate metabolic process;0.000679683934610093!GO:0033162;melanosome membrane;0.000706285906771786!GO:0045009;chitosome;0.000706285906771786!GO:0030384;phosphoinositide metabolic process;0.000734707585873566!GO:0008033;tRNA processing;0.000763750897747707!GO:0019748;secondary metabolic process;0.000813696537486018!GO:0000314;organellar small ribosomal subunit;0.000814127959783578!GO:0005763;mitochondrial small ribosomal subunit;0.000814127959783578!GO:0016126;sterol biosynthetic process;0.000819766837660046!GO:0005741;mitochondrial outer membrane;0.000854651133740364!GO:0050662;coenzyme binding;0.000930595847947978!GO:0005525;GTP binding;0.000944586811329038!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000953460215397005!GO:0045454;cell redox homeostasis;0.000976901538482578!GO:0043069;negative regulation of programmed cell death;0.000976901538482578!GO:0033116;ER-Golgi intermediate compartment membrane;0.000977299326682351!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.0010399804251914!GO:0008250;oligosaccharyl transferase complex;0.0010641357358935!GO:0007243;protein kinase cascade;0.00106989698680494!GO:0051920;peroxiredoxin activity;0.00107278384089392!GO:0030027;lamellipodium;0.00115708628509081!GO:0043066;negative regulation of apoptosis;0.00115862341765048!GO:0003684;damaged DNA binding;0.00123889306165455!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00126066772239503!GO:0004576;oligosaccharyl transferase activity;0.00130135950784909!GO:0030658;transport vesicle membrane;0.00130843205218815!GO:0006613;cotranslational protein targeting to membrane;0.00132211169961589!GO:0030133;transport vesicle;0.0013345045241678!GO:0048487;beta-tubulin binding;0.00146979876494417!GO:0007006;mitochondrial membrane organization and biogenesis;0.00148147401188935!GO:0005885;Arp2/3 protein complex;0.00154555393345028!GO:0051789;response to protein stimulus;0.00157813780484462!GO:0006986;response to unfolded protein;0.00157813780484462!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.00163855459731385!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00164212027131529!GO:0007034;vacuolar transport;0.00173132480293444!GO:0006778;porphyrin metabolic process;0.00173132480293444!GO:0033013;tetrapyrrole metabolic process;0.00173132480293444!GO:0006414;translational elongation;0.00179108170232301!GO:0043021;ribonucleoprotein binding;0.00179962881237561!GO:0051028;mRNA transport;0.00183644146891371!GO:0030663;COPI coated vesicle membrane;0.00184369427105741!GO:0030126;COPI vesicle coat;0.00184369427105741!GO:0000287;magnesium ion binding;0.00184626659082668!GO:0043681;protein import into mitochondrion;0.00184655591772635!GO:0030137;COPI-coated vesicle;0.00186108938427778!GO:0008186;RNA-dependent ATPase activity;0.00196630234759116!GO:0019318;hexose metabolic process;0.00200293540570797!GO:0042158;lipoprotein biosynthetic process;0.00206347239685354!GO:0006506;GPI anchor biosynthetic process;0.00207104138192845!GO:0048037;cofactor binding;0.00207104138192845!GO:0035258;steroid hormone receptor binding;0.00208242160582692!GO:0005996;monosaccharide metabolic process;0.00211570804445906!GO:0008022;protein C-terminus binding;0.00230172742617367!GO:0030176;integral to endoplasmic reticulum membrane;0.00233448161281178!GO:0008092;cytoskeletal protein binding;0.00237373605433633!GO:0003678;DNA helicase activity;0.00240189121952766!GO:0006612;protein targeting to membrane;0.00243076642369672!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00260614496935259!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00260614496935259!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00260614496935259!GO:0000059;protein import into nucleus, docking;0.00274875309374849!GO:0048069;eye pigmentation;0.00280012321339417!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00281140223691801!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00282367850279701!GO:0006505;GPI anchor metabolic process;0.00283663519861617!GO:0006497;protein amino acid lipidation;0.00291241675168762!GO:0030145;manganese ion binding;0.00300222642109402!GO:0048519;negative regulation of biological process;0.00301463121552646!GO:0030867;rough endoplasmic reticulum membrane;0.0030185664230901!GO:0045792;negative regulation of cell size;0.00303223288215652!GO:0008094;DNA-dependent ATPase activity;0.00313748979945674!GO:0042168;heme metabolic process;0.00314567987785169!GO:0006695;cholesterol biosynthetic process;0.0031472313957113!GO:0006839;mitochondrial transport;0.00323682580893975!GO:0008632;apoptotic program;0.00329314439648541!GO:0030660;Golgi-associated vesicle membrane;0.00340364080551652!GO:0006261;DNA-dependent DNA replication;0.00363446530307005!GO:0006779;porphyrin biosynthetic process;0.00369604174938361!GO:0033014;tetrapyrrole biosynthetic process;0.00369604174938361!GO:0004518;nuclease activity;0.00370841675516739!GO:0016301;kinase activity;0.00383058785866666!GO:0031301;integral to organelle membrane;0.00396521265305384!GO:0051168;nuclear export;0.00415869037794428!GO:0006520;amino acid metabolic process;0.00418194023245814!GO:0006629;lipid metabolic process;0.00425627011432122!GO:0050790;regulation of catalytic activity;0.00435801387564676!GO:0018196;peptidyl-asparagine modification;0.00452834921809339!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00452834921809339!GO:0030308;negative regulation of cell growth;0.00454281600547785!GO:0030036;actin cytoskeleton organization and biogenesis;0.00462670412767279!GO:0004004;ATP-dependent RNA helicase activity;0.00467573570627905!GO:0003690;double-stranded DNA binding;0.00469525714988796!GO:0007010;cytoskeleton organization and biogenesis;0.00500687548291431!GO:0006626;protein targeting to mitochondrion;0.00503975209279313!GO:0030131;clathrin adaptor complex;0.00512178236320979!GO:0003746;translation elongation factor activity;0.00544557789711711!GO:0032561;guanyl ribonucleotide binding;0.00553816455964698!GO:0019001;guanyl nucleotide binding;0.00553816455964698!GO:0007041;lysosomal transport;0.00557527354284447!GO:0016859;cis-trans isomerase activity;0.00583747233977117!GO:0031072;heat shock protein binding;0.00593554768203926!GO:0006289;nucleotide-excision repair;0.00612353163545415!GO:0017166;vinculin binding;0.0062307840505368!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00629592710709514!GO:0015002;heme-copper terminal oxidase activity;0.00629592710709514!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00629592710709514!GO:0004129;cytochrome-c oxidase activity;0.00629592710709514!GO:0016741;transferase activity, transferring one-carbon groups;0.00629592710709514!GO:0004674;protein serine/threonine kinase activity;0.00652639819975981!GO:0006783;heme biosynthetic process;0.00654418439274608!GO:0006891;intra-Golgi vesicle-mediated transport;0.00654729847170937!GO:0003682;chromatin binding;0.00662292667779761!GO:0048154;S100 beta binding;0.00700243632340166!GO:0030119;AP-type membrane coat adaptor complex;0.00700243632340166!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00705670160345467!GO:0006007;glucose catabolic process;0.00706406842482951!GO:0008287;protein serine/threonine phosphatase complex;0.00709366707788395!GO:0030132;clathrin coat of coated pit;0.00713119739966191!GO:0030125;clathrin vesicle coat;0.00775816852176837!GO:0030665;clathrin coated vesicle membrane;0.00775816852176837!GO:0006726;eye pigment biosynthetic process;0.00801645457915201!GO:0042441;eye pigment metabolic process;0.00801645457915201!GO:0008168;methyltransferase activity;0.00802878932722521!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0083426493510008!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00864810446635901!GO:0005777;peroxisome;0.00875086038211238!GO:0042579;microbody;0.00875086038211238!GO:0006066;alcohol metabolic process;0.0087982817628535!GO:0000075;cell cycle checkpoint;0.00919840093853177!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00959237134084047!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00959237134084047!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00959237134084047!GO:0031324;negative regulation of cellular metabolic process;0.00983995329422886!GO:0051287;NAD binding;0.00989449471379344!GO:0019206;nucleoside kinase activity;0.00996296114299372!GO:0009100;glycoprotein metabolic process;0.0102336396190373!GO:0006767;water-soluble vitamin metabolic process;0.0104402503512376!GO:0046483;heterocycle metabolic process;0.0106891164820499!GO:0006582;melanin metabolic process;0.0107321144991324!GO:0006583;melanin biosynthetic process from tyrosine;0.0107321144991324!GO:0042438;melanin biosynthetic process;0.0107321144991324!GO:0030029;actin filament-based process;0.0107893180341171!GO:0006611;protein export from nucleus;0.0108895238258334!GO:0007051;spindle organization and biogenesis;0.0111331365464226!GO:0000775;chromosome, pericentric region;0.0112763836747887!GO:0006807;nitrogen compound metabolic process;0.0113835607151247!GO:0051539;4 iron, 4 sulfur cluster binding;0.0114951591885273!GO:0006338;chromatin remodeling;0.011544555169771!GO:0016791;phosphoric monoester hydrolase activity;0.0115843163636292!GO:0043414;biopolymer methylation;0.0119416180113992!GO:0006730;one-carbon compound metabolic process;0.0119894458232067!GO:0005637;nuclear inner membrane;0.0121574354006297!GO:0005657;replication fork;0.0121721489766171!GO:0045926;negative regulation of growth;0.0123206386099668!GO:0008139;nuclear localization sequence binding;0.0123985618795821!GO:0030880;RNA polymerase complex;0.012512776787248!GO:0004177;aminopeptidase activity;0.0126214515913324!GO:0050931;pigment cell differentiation;0.0133464658591634!GO:0030318;melanocyte differentiation;0.0133464658591634!GO:0051540;metal cluster binding;0.0134372413691307!GO:0051536;iron-sulfur cluster binding;0.0134372413691307!GO:0001726;ruffle;0.0135601964152032!GO:0016044;membrane organization and biogenesis;0.0135936621438964!GO:0006740;NADPH regeneration;0.0135936621438964!GO:0006098;pentose-phosphate shunt;0.0135936621438964!GO:0007050;cell cycle arrest;0.0137159459341134!GO:0006383;transcription from RNA polymerase III promoter;0.0138405948432797!GO:0000118;histone deacetylase complex;0.013950748315854!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.013995891060917!GO:0043488;regulation of mRNA stability;0.013995891060917!GO:0043487;regulation of RNA stability;0.013995891060917!GO:0008234;cysteine-type peptidase activity;0.0141858496897651!GO:0006635;fatty acid beta-oxidation;0.014244869549045!GO:0000030;mannosyltransferase activity;0.0143121672793106!GO:0016311;dephosphorylation;0.0144035703187264!GO:0008017;microtubule binding;0.0145159406005855!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0147351803466646!GO:0005869;dynactin complex;0.0152314054665536!GO:0006733;oxidoreduction coenzyme metabolic process;0.0154810838383677!GO:0016125;sterol metabolic process;0.0154810838383677!GO:0030149;sphingolipid catabolic process;0.0157304924090829!GO:0044438;microbody part;0.0161732499569548!GO:0044439;peroxisomal part;0.0161732499569548!GO:0000082;G1/S transition of mitotic cell cycle;0.0169160811043689!GO:0042987;amyloid precursor protein catabolic process;0.0172600151536322!GO:0009308;amine metabolic process;0.0175874583194989!GO:0030521;androgen receptor signaling pathway;0.0179034389101703!GO:0016363;nuclear matrix;0.0180762349434065!GO:0008538;proteasome activator activity;0.0184101705740556!GO:0016197;endosome transport;0.0188030822946463!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0193368273970577!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.0193643254335281!GO:0000123;histone acetyltransferase complex;0.0194549609305576!GO:0004722;protein serine/threonine phosphatase activity;0.0196396987461846!GO:0005876;spindle microtubule;0.0198487883917925!GO:0006352;transcription initiation;0.0199999581048634!GO:0032508;DNA duplex unwinding;0.0200551542568246!GO:0032392;DNA geometric change;0.0200551542568246!GO:0007088;regulation of mitosis;0.0204827451816821!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0205503409675601!GO:0051252;regulation of RNA metabolic process;0.0207458048778098!GO:0050811;GABA receptor binding;0.0208348587228414!GO:0006013;mannose metabolic process;0.0210359684311532!GO:0006402;mRNA catabolic process;0.0210583774757305!GO:0006310;DNA recombination;0.021178021736341!GO:0044452;nucleolar part;0.0213433532983394!GO:0030496;midbody;0.0222138136317203!GO:0016788;hydrolase activity, acting on ester bonds;0.0222547999940358!GO:0030518;steroid hormone receptor signaling pathway;0.0224626076732758!GO:0006665;sphingolipid metabolic process;0.0225707850983801!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0225863262209162!GO:0004003;ATP-dependent DNA helicase activity;0.0225884539978449!GO:0009892;negative regulation of metabolic process;0.022701853213709!GO:0005684;U2-dependent spliceosome;0.0230154829055559!GO:0006118;electron transport;0.0235646742473683!GO:0006595;polyamine metabolic process;0.0236244488534915!GO:0000062;acyl-CoA binding;0.0240724420120933!GO:0043189;H4/H2A histone acetyltransferase complex;0.0242216360361106!GO:0003711;transcription elongation regulator activity;0.0243083838681033!GO:0035035;histone acetyltransferase binding;0.0252551344979475!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0254211363862711!GO:0000428;DNA-directed RNA polymerase complex;0.0254211363862711!GO:0008276;protein methyltransferase activity;0.0254231779862627!GO:0004527;exonuclease activity;0.0254231779862627!GO:0008361;regulation of cell size;0.0258400778988977!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.025937136382839!GO:0005832;chaperonin-containing T-complex;0.025937136382839!GO:0006220;pyrimidine nucleotide metabolic process;0.0260572361802049!GO:0001573;ganglioside metabolic process;0.0266552238255868!GO:0031903;microbody membrane;0.0267390226651699!GO:0005778;peroxisomal membrane;0.0267390226651699!GO:0005791;rough endoplasmic reticulum;0.0268347600769776!GO:0031300;intrinsic to organelle membrane;0.0268347600769776!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0270675397365145!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0272274089955778!GO:0010257;NADH dehydrogenase complex assembly;0.0272274089955778!GO:0033108;mitochondrial respiratory chain complex assembly;0.0272274089955778!GO:0031529;ruffle organization and biogenesis;0.0273282699558456!GO:0006904;vesicle docking during exocytosis;0.0281652884869984!GO:0032259;methylation;0.0287461888680449!GO:0000910;cytokinesis;0.029092132428346!GO:0016614;oxidoreductase activity, acting on CH-OH group of donors;0.0294689961343511!GO:0019377;glycolipid catabolic process;0.0296240346177769!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.0299750201374231!GO:0051087;chaperone binding;0.0300674939037962!GO:0050681;androgen receptor binding;0.0301673871353472!GO:0046488;phosphatidylinositol metabolic process;0.0306350853333644!GO:0016584;nucleosome positioning;0.0309203098473075!GO:0016569;covalent chromatin modification;0.0310234717605813!GO:0030134;ER to Golgi transport vesicle;0.0310234717605813!GO:0051059;NF-kappaB binding;0.0310234717605813!GO:0022406;membrane docking;0.0316975545339722!GO:0048278;vesicle docking;0.0316975545339722!GO:0004192;cathepsin D activity;0.0321181996879345!GO:0000096;sulfur amino acid metabolic process;0.032309746513568!GO:0007265;Ras protein signal transduction;0.032309746513568!GO:0009303;rRNA transcription;0.0331278499827708!GO:0016049;cell growth;0.0331278499827708!GO:0043407;negative regulation of MAP kinase activity;0.0337502245386237!GO:0003729;mRNA binding;0.0337502245386237!GO:0006914;autophagy;0.0339974299680531!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0341479074477276!GO:0003923;GPI-anchor transamidase activity;0.0341479074477276!GO:0016255;attachment of GPI anchor to protein;0.0341479074477276!GO:0042765;GPI-anchor transamidase complex;0.0341479074477276!GO:0001558;regulation of cell growth;0.0341479074477276!GO:0042771;DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis;0.0343658622383027!GO:0046479;glycosphingolipid catabolic process;0.0344842434534401!GO:0043126;regulation of 1-phosphatidylinositol 4-kinase activity;0.034626761403539!GO:0046813;virion attachment, binding of host cell surface receptor;0.034626761403539!GO:0043128;positive regulation of 1-phosphatidylinositol 4-kinase activity;0.034626761403539!GO:0007264;small GTPase mediated signal transduction;0.0348095720840462!GO:0008213;protein amino acid alkylation;0.0352034035453922!GO:0006479;protein amino acid methylation;0.0352034035453922!GO:0035267;NuA4 histone acetyltransferase complex;0.0359829965223857!GO:0006401;RNA catabolic process;0.0365843286121581!GO:0051452;cellular pH reduction;0.037505234732753!GO:0051453;regulation of cellular pH;0.037505234732753!GO:0045851;pH reduction;0.037505234732753!GO:0006516;glycoprotein catabolic process;0.0377998263179112!GO:0031124;mRNA 3'-end processing;0.0379478299442045!GO:0040029;regulation of gene expression, epigenetic;0.0381546647618999!GO:0019395;fatty acid oxidation;0.0387483778076338!GO:0050794;regulation of cellular process;0.0388752427891314!GO:0048522;positive regulation of cellular process;0.0397741462895079!GO:0043022;ribosome binding;0.0397839230822328!GO:0007346;regulation of progression through mitotic cell cycle;0.039937052017661!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0403661777745819!GO:0016570;histone modification;0.0406154418831957!GO:0016408;C-acyltransferase activity;0.040618907735256!GO:0030127;COPII vesicle coat;0.0411015165707405!GO:0012507;ER to Golgi transport vesicle membrane;0.0411015165707405!GO:0030140;trans-Golgi network transport vesicle;0.0411197171806863!GO:0004448;isocitrate dehydrogenase activity;0.0412464331515878!GO:0006096;glycolysis;0.041321968495218!GO:0046365;monosaccharide catabolic process;0.0416559019741664!GO:0030130;clathrin coat of trans-Golgi network vesicle;0.0416559019741664!GO:0012510;trans-Golgi network transport vesicle membrane;0.0416559019741664!GO:0016860;intramolecular oxidoreductase activity;0.0416559019741664!GO:0006376;mRNA splice site selection;0.0418398435678748!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0418398435678748!GO:0006268;DNA unwinding during replication;0.0433217294257933!GO:0046983;protein dimerization activity;0.0434809685945245!GO:0050178;phenylpyruvate tautomerase activity;0.0439296350625173!GO:0016579;protein deubiquitination;0.0444883671882455!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0454146738228936!GO:0006519;amino acid and derivative metabolic process;0.0457050191568576!GO:0008637;apoptotic mitochondrial changes;0.0458732735552217!GO:0005784;translocon complex;0.0460353295631996!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0464495881165229!GO:0031628;opioid receptor binding;0.046567270656123!GO:0031852;mu-type opioid receptor binding;0.046567270656123!GO:0008180;signalosome;0.0469591038176937!GO:0045947;negative regulation of translational initiation;0.047006221864787!GO:0000049;tRNA binding;0.0472883440412133!GO:0000084;S phase of mitotic cell cycle;0.0478037970480048!GO:0030911;TPR domain binding;0.0485541334203959!GO:0033673;negative regulation of kinase activity;0.0488463333630804!GO:0006469;negative regulation of protein kinase activity;0.0488463333630804!GO:0051348;negative regulation of transferase activity;0.0490193174234581!GO:0042982;amyloid precursor protein metabolic process;0.0492408551752889!GO:0006518;peptide metabolic process;0.0494579456898718!GO:0004680;casein kinase activity;0.0497013983308209!GO:0006284;base-excision repair;0.0497013983308209!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.049746529240742 | |||
|sample_id=11351 | |sample_id=11351 | ||
|sample_note= | |sample_note= | ||
Line 75: | Line 105: | ||
|sample_tissue=skin | |sample_tissue=skin | ||
|top_motifs=ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:3.25735698376;NFE2L1:2.60575072517;SREBF1,2:2.08690386321;NR5A1,2:2.03771739098;PAX6:2.0033725104;ZNF423:1.77110662212;ESRRA:1.72437594166;HES1:1.6857939808;bHLH_family:1.57900694128;RXR{A,B,G}:1.46533069628;NANOG:1.17020087233;EN1,2:1.15822496778;SOX{8,9,10}:1.13840659576;PBX1:1.11588634771;PAX8:1.07898878684;GTF2A1,2:1.07886838597;NR3C1:1.04412006766;EBF1:1.02486721206;XCPE1{core}:0.881214561699;ESR1:0.863913572757;HOX{A6,A7,B6,B7}:0.850920772726;POU3F1..4:0.850445029173;TFCP2:0.820752729342;TFDP1:0.802151721414;HMX1:0.738410658475;LHX3,4:0.728115649628;SP1:0.684143688794;RORA:0.669771021152;ZNF238:0.64118009625;GFI1:0.617267010397;ARID5B:0.584352545052;NFY{A,B,C}:0.575534794364;AR:0.548786520108;TLX1..3_NFIC{dimer}:0.543412856678;GZF1:0.536966862279;FOX{F1,F2,J1}:0.534652799886;POU2F1..3:0.532322352242;NKX2-3_NKX2-5:0.520779328561;PAX2:0.511675315733;LMO2:0.5011725752;PAX5:0.459582182485;JUN:0.443379671488;RFX2..5_RFXANK_RFXAP:0.432733683942;ZNF148:0.430772583235;TFAP2{A,C}:0.430417100943;HOXA9_MEIS1:0.427452747941;POU1F1:0.419749251958;ZIC1..3:0.398347803627;XBP1:0.352700052919;GFI1B:0.347263261197;HIC1:0.31590541829;TFAP2B:0.292798141674;HNF4A_NR2F1,2:0.285697682834;ZNF143:0.275816851422;SOX5:0.272007471919;EP300:0.267472902707;HOX{A4,D4}:0.240174295559;NFIX:0.233292361417;ZBTB6:0.226014185078;PRRX1,2:0.207941000313;GTF2I:0.161112027406;PAX1,9:0.146130501177;TP53:0.125148986864;CUX2:0.0994937921433;YY1:0.0596488409259;FOX{D1,D2}:0.0552301684187;REST:0.0547457330279;NHLH1,2:0.0397972126846;E2F1..5:0.0360050421112;SOX2:0.0255343525218;HNF1A:0.0148568906594;RUNX1..3:0.0134338165752;OCT4_SOX2{dimer}:0.00604460309331;RXRA_VDR{dimer}:-0.00407360507093;FOXM1:-0.00894347592776;STAT5{A,B}:-0.0112948243079;RFX1:-0.0156460435004;FOSL2:-0.0323354461921;BACH2:-0.0335853618233;MEF2{A,B,C,D}:-0.0338118789696;POU6F1:-0.0457605837731;GATA6:-0.050011564781;NRF1:-0.0852882539498;ONECUT1,2:-0.0969672397959;VSX1,2:-0.124040617164;IKZF1:-0.144311163748;GLI1..3:-0.163925559451;LEF1_TCF7_TCF7L1,2:-0.173989243791;MTF1:-0.186341372191;MYB:-0.192892782427;ELK1,4_GABP{A,B1}:-0.209305969415;NFE2:-0.212773755676;CRX:-0.213226477965;BREu{core}:-0.242707779275;GCM1,2:-0.253315896362;CREB1:-0.288600244168;PAX4:-0.289958170009;IRF7:-0.295185049196;UFEwm:-0.300559870638;SOX17:-0.31186373798;ZFP161:-0.317004057591;FOS_FOS{B,L1}_JUN{B,D}:-0.323954022544;SPI1:-0.325256515465;ETS1,2:-0.328857762344;PPARG:-0.337302013497;HOX{A5,B5}:-0.346166376551;EGR1..3:-0.346630821978;SPIB:-0.361569497556;NFIL3:-0.364197170215;FOXL1:-0.366607758451;RREB1:-0.37776420603;IRF1,2:-0.382971971105;CEBPA,B_DDIT3:-0.391743891819;MED-1{core}:-0.400561140319;TFAP4:-0.43123757329;SNAI1..3:-0.43928297179;NFKB1_REL_RELA:-0.444582757228;FOXA2:-0.456177270227;CDC5L:-0.462071495115;MAFB:-0.462484100311;HAND1,2:-0.47603896205;ATF5_CREB3:-0.477072444218;NFE2L2:-0.483292758287;NANOG{mouse}:-0.489153802681;TGIF1:-0.496946027429;ELF1,2,4:-0.50435070013;STAT1,3:-0.523732210269;TEAD1:-0.534970997702;TLX2:-0.54507835662;FOXP3:-0.54924658952;FOX{I1,J2}:-0.559659241922;TAL1_TCF{3,4,12}:-0.564197729303;ATF4:-0.58872482388;STAT2,4,6:-0.629652531175;MYOD1:-0.633384054509;TOPORS:-0.634684804668;TEF:-0.645905864582;KLF4:-0.654918583561;AHR_ARNT_ARNT2:-0.668943887268;NFATC1..3:-0.679324459392;HLF:-0.698602171905;SRF:-0.753241285181;EVI1:-0.783969544411;NR6A1:-0.785119615575;SMAD1..7,9:-0.793529368449;RBPJ:-0.809226120486;MAZ:-0.810835480343;HBP1_HMGB_SSRP1_UBTF:-0.845592809724;PDX1:-0.855354626408;MZF1:-0.888468616305;MYFfamily:-0.894137160254;ALX4:-0.903415463906;PATZ1:-0.908294190151;MYBL2:-0.912070743834;ADNP_IRX_SIX_ZHX:-0.912161277573;TBP:-0.91282213494;ZEB1:-0.920335130342;DBP:-0.951452187828;PAX3,7:-1.00486182741;ATF2:-1.00627958958;NR1H4:-1.02042651043;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.04304952976;MTE{core}:-1.0536599271;DMAP1_NCOR{1,2}_SMARC:-1.06103005774;NKX6-1,2:-1.0694230853;HMGA1,2:-1.10417896609;PRDM1:-1.12331219806;ATF6:-1.2111441263;TBX4,5:-1.21216128402;PITX1..3:-1.22645350761;BPTF:-1.2376771097;SPZ1:-1.25631823786;T:-1.29926980821;HIF1A:-1.30773389293;FOXQ1:-1.32363995457;HSF1,2:-1.33024897862;NKX3-2:-1.35022412949;FOXO1,3,4:-1.3605036268;ZNF384:-1.389389177;FOXN1:-1.396723139;GATA4:-1.40841899148;IKZF2:-1.6499778207;ZBTB16:-1.66387704017;NKX3-1:-1.70925143793;NKX2-1,4:-1.71351692222;CDX1,2,4:-1.7304338195;AIRE:-1.76093044152;NKX2-2,8:-1.76815110125;FOXP1:-1.85871327121;POU5F1:-1.91855605949;ALX1:-2.4517085752;FOXD3:-2.85523579943 | |top_motifs=ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:3.25735698376;NFE2L1:2.60575072517;SREBF1,2:2.08690386321;NR5A1,2:2.03771739098;PAX6:2.0033725104;ZNF423:1.77110662212;ESRRA:1.72437594166;HES1:1.6857939808;bHLH_family:1.57900694128;RXR{A,B,G}:1.46533069628;NANOG:1.17020087233;EN1,2:1.15822496778;SOX{8,9,10}:1.13840659576;PBX1:1.11588634771;PAX8:1.07898878684;GTF2A1,2:1.07886838597;NR3C1:1.04412006766;EBF1:1.02486721206;XCPE1{core}:0.881214561699;ESR1:0.863913572757;HOX{A6,A7,B6,B7}:0.850920772726;POU3F1..4:0.850445029173;TFCP2:0.820752729342;TFDP1:0.802151721414;HMX1:0.738410658475;LHX3,4:0.728115649628;SP1:0.684143688794;RORA:0.669771021152;ZNF238:0.64118009625;GFI1:0.617267010397;ARID5B:0.584352545052;NFY{A,B,C}:0.575534794364;AR:0.548786520108;TLX1..3_NFIC{dimer}:0.543412856678;GZF1:0.536966862279;FOX{F1,F2,J1}:0.534652799886;POU2F1..3:0.532322352242;NKX2-3_NKX2-5:0.520779328561;PAX2:0.511675315733;LMO2:0.5011725752;PAX5:0.459582182485;JUN:0.443379671488;RFX2..5_RFXANK_RFXAP:0.432733683942;ZNF148:0.430772583235;TFAP2{A,C}:0.430417100943;HOXA9_MEIS1:0.427452747941;POU1F1:0.419749251958;ZIC1..3:0.398347803627;XBP1:0.352700052919;GFI1B:0.347263261197;HIC1:0.31590541829;TFAP2B:0.292798141674;HNF4A_NR2F1,2:0.285697682834;ZNF143:0.275816851422;SOX5:0.272007471919;EP300:0.267472902707;HOX{A4,D4}:0.240174295559;NFIX:0.233292361417;ZBTB6:0.226014185078;PRRX1,2:0.207941000313;GTF2I:0.161112027406;PAX1,9:0.146130501177;TP53:0.125148986864;CUX2:0.0994937921433;YY1:0.0596488409259;FOX{D1,D2}:0.0552301684187;REST:0.0547457330279;NHLH1,2:0.0397972126846;E2F1..5:0.0360050421112;SOX2:0.0255343525218;HNF1A:0.0148568906594;RUNX1..3:0.0134338165752;OCT4_SOX2{dimer}:0.00604460309331;RXRA_VDR{dimer}:-0.00407360507093;FOXM1:-0.00894347592776;STAT5{A,B}:-0.0112948243079;RFX1:-0.0156460435004;FOSL2:-0.0323354461921;BACH2:-0.0335853618233;MEF2{A,B,C,D}:-0.0338118789696;POU6F1:-0.0457605837731;GATA6:-0.050011564781;NRF1:-0.0852882539498;ONECUT1,2:-0.0969672397959;VSX1,2:-0.124040617164;IKZF1:-0.144311163748;GLI1..3:-0.163925559451;LEF1_TCF7_TCF7L1,2:-0.173989243791;MTF1:-0.186341372191;MYB:-0.192892782427;ELK1,4_GABP{A,B1}:-0.209305969415;NFE2:-0.212773755676;CRX:-0.213226477965;BREu{core}:-0.242707779275;GCM1,2:-0.253315896362;CREB1:-0.288600244168;PAX4:-0.289958170009;IRF7:-0.295185049196;UFEwm:-0.300559870638;SOX17:-0.31186373798;ZFP161:-0.317004057591;FOS_FOS{B,L1}_JUN{B,D}:-0.323954022544;SPI1:-0.325256515465;ETS1,2:-0.328857762344;PPARG:-0.337302013497;HOX{A5,B5}:-0.346166376551;EGR1..3:-0.346630821978;SPIB:-0.361569497556;NFIL3:-0.364197170215;FOXL1:-0.366607758451;RREB1:-0.37776420603;IRF1,2:-0.382971971105;CEBPA,B_DDIT3:-0.391743891819;MED-1{core}:-0.400561140319;TFAP4:-0.43123757329;SNAI1..3:-0.43928297179;NFKB1_REL_RELA:-0.444582757228;FOXA2:-0.456177270227;CDC5L:-0.462071495115;MAFB:-0.462484100311;HAND1,2:-0.47603896205;ATF5_CREB3:-0.477072444218;NFE2L2:-0.483292758287;NANOG{mouse}:-0.489153802681;TGIF1:-0.496946027429;ELF1,2,4:-0.50435070013;STAT1,3:-0.523732210269;TEAD1:-0.534970997702;TLX2:-0.54507835662;FOXP3:-0.54924658952;FOX{I1,J2}:-0.559659241922;TAL1_TCF{3,4,12}:-0.564197729303;ATF4:-0.58872482388;STAT2,4,6:-0.629652531175;MYOD1:-0.633384054509;TOPORS:-0.634684804668;TEF:-0.645905864582;KLF4:-0.654918583561;AHR_ARNT_ARNT2:-0.668943887268;NFATC1..3:-0.679324459392;HLF:-0.698602171905;SRF:-0.753241285181;EVI1:-0.783969544411;NR6A1:-0.785119615575;SMAD1..7,9:-0.793529368449;RBPJ:-0.809226120486;MAZ:-0.810835480343;HBP1_HMGB_SSRP1_UBTF:-0.845592809724;PDX1:-0.855354626408;MZF1:-0.888468616305;MYFfamily:-0.894137160254;ALX4:-0.903415463906;PATZ1:-0.908294190151;MYBL2:-0.912070743834;ADNP_IRX_SIX_ZHX:-0.912161277573;TBP:-0.91282213494;ZEB1:-0.920335130342;DBP:-0.951452187828;PAX3,7:-1.00486182741;ATF2:-1.00627958958;NR1H4:-1.02042651043;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.04304952976;MTE{core}:-1.0536599271;DMAP1_NCOR{1,2}_SMARC:-1.06103005774;NKX6-1,2:-1.0694230853;HMGA1,2:-1.10417896609;PRDM1:-1.12331219806;ATF6:-1.2111441263;TBX4,5:-1.21216128402;PITX1..3:-1.22645350761;BPTF:-1.2376771097;SPZ1:-1.25631823786;T:-1.29926980821;HIF1A:-1.30773389293;FOXQ1:-1.32363995457;HSF1,2:-1.33024897862;NKX3-2:-1.35022412949;FOXO1,3,4:-1.3605036268;ZNF384:-1.389389177;FOXN1:-1.396723139;GATA4:-1.40841899148;IKZF2:-1.6499778207;ZBTB16:-1.66387704017;NKX3-1:-1.70925143793;NKX2-1,4:-1.71351692222;CDX1,2,4:-1.7304338195;AIRE:-1.76093044152;NKX2-2,8:-1.76815110125;FOXP1:-1.85871327121;POU5F1:-1.91855605949;ALX1:-2.4517085752;FOXD3:-2.85523579943 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11351-117H1;search_select_hide=table117:FF:11351-117H1 | |||
}} | }} |
Latest revision as of 17:54, 4 June 2020
Name: | Melanocyte - light, donor2 |
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Species: | Human (Homo sapiens) |
Library ID: | CNhs11383 |
Sample type: | primary cells |
Genomic View: | UCSC |
RefEX: | Specific genes |
FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8 |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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Download raw sequence, BAM & CTSS | ||||||||||||||
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RNA-Seq Accession numbers | ||||||||||||||||||||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11383
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11383
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.864 |
10 | 10 | 0.538 |
100 | 100 | 0.533 |
101 | 101 | 0.0478 |
102 | 102 | 0.0388 |
103 | 103 | 0.0531 |
104 | 104 | 0.283 |
105 | 105 | 0.976 |
106 | 106 | 0.926 |
107 | 107 | 0.666 |
108 | 108 | 0.866 |
109 | 109 | 0.022 |
11 | 11 | 0.682 |
110 | 110 | 0.0379 |
111 | 111 | 0.0649 |
112 | 112 | 0.73 |
113 | 113 | 0.0188 |
114 | 114 | 0.571 |
115 | 115 | 0.749 |
116 | 116 | 0.89 |
117 | 117 | 0.271 |
118 | 118 | 0.873 |
119 | 119 | 0.695 |
12 | 12 | 0.66 |
120 | 120 | 0.955 |
121 | 121 | 0.295 |
122 | 122 | 0.163 |
123 | 123 | 0.956 |
124 | 124 | 0.895 |
125 | 125 | 0.484 |
126 | 126 | 0.794 |
127 | 127 | 0.645 |
128 | 128 | 0.429 |
129 | 129 | 0.0298 |
13 | 13 | 0.367 |
130 | 130 | 0.416 |
131 | 131 | 0.522 |
132 | 132 | 0.412 |
133 | 133 | 0.351 |
134 | 134 | 0.71 |
135 | 135 | 0.268 |
136 | 136 | 0.101 |
137 | 137 | 0.714 |
138 | 138 | 0.91 |
139 | 139 | 0.176 |
14 | 14 | 0.935 |
140 | 140 | 0.39 |
141 | 141 | 0.095 |
142 | 142 | 0.975 |
143 | 143 | 0.409 |
144 | 144 | 0.764 |
145 | 145 | 0.672 |
146 | 146 | 3.41269e-4 |
147 | 147 | 0.6 |
148 | 148 | 0.0113 |
149 | 149 | 0.695 |
15 | 15 | 0.782 |
150 | 150 | 0.734 |
151 | 151 | 0.861 |
152 | 152 | 0.283 |
153 | 153 | 0.069 |
154 | 154 | 0.0166 |
155 | 155 | 0.654 |
156 | 156 | 0.921 |
157 | 157 | 0.867 |
158 | 158 | 0.567 |
159 | 159 | 0.843 |
16 | 16 | 0.377 |
160 | 160 | 0.701 |
161 | 161 | 0.641 |
162 | 162 | 0.048 |
163 | 163 | 0.726 |
164 | 164 | 0.255 |
165 | 165 | 0.18 |
166 | 166 | 0.486 |
167 | 167 | 0.17 |
168 | 168 | 0.215 |
169 | 169 | 0.21 |
17 | 17 | 0.419 |
18 | 18 | 0.158 |
19 | 19 | 0.311 |
2 | 2 | 0.933 |
20 | 20 | 0.824 |
21 | 21 | 0.414 |
22 | 22 | 0.011 |
23 | 23 | 0.668 |
24 | 24 | 0.949 |
25 | 25 | 0.358 |
26 | 26 | 0.49 |
27 | 27 | 0.23 |
28 | 28 | 0.273 |
29 | 29 | 0.0543 |
3 | 3 | 0.886 |
30 | 30 | 0.641 |
31 | 31 | 0.673 |
32 | 32 | 0.0868 |
33 | 33 | 0.304 |
34 | 34 | 0.236 |
35 | 35 | 0.438 |
36 | 36 | 0.884 |
37 | 37 | 0.66 |
38 | 38 | 0.312 |
39 | 39 | 0.799 |
4 | 4 | 0.601 |
40 | 40 | 0.0144 |
41 | 41 | 0.927 |
42 | 42 | 0.264 |
43 | 43 | 0.463 |
44 | 44 | 0.979 |
45 | 45 | 0.7 |
46 | 46 | 0.345 |
47 | 47 | 0.675 |
48 | 48 | 0.902 |
49 | 49 | 0.581 |
5 | 5 | 0.6 |
50 | 50 | 0.364 |
51 | 51 | 0.913 |
52 | 52 | 0.797 |
53 | 53 | 0.112 |
54 | 54 | 0.626 |
55 | 55 | 0.447 |
56 | 56 | 0.587 |
57 | 57 | 0.45 |
58 | 58 | 0.128 |
59 | 59 | 0.268 |
6 | 6 | 0.933 |
60 | 60 | 0.823 |
61 | 61 | 0.677 |
62 | 62 | 0.0293 |
63 | 63 | 0.51 |
64 | 64 | 0.363 |
65 | 65 | 0.0683 |
66 | 66 | 0.00564 |
67 | 67 | 0.664 |
68 | 68 | 0.151 |
69 | 69 | 0.709 |
7 | 7 | 0.946 |
70 | 70 | 0.822 |
71 | 71 | 0.729 |
72 | 72 | 0.949 |
73 | 73 | 0.00748 |
74 | 74 | 0.189 |
75 | 75 | 0.528 |
76 | 76 | 0.887 |
77 | 77 | 0.412 |
78 | 78 | 0.21 |
79 | 79 | 0.647 |
8 | 8 | 0.3 |
80 | 80 | 0.76 |
81 | 81 | 0.856 |
82 | 82 | 0.998 |
83 | 83 | 0.277 |
84 | 84 | 0.151 |
85 | 85 | 0.351 |
86 | 86 | 0.782 |
87 | 87 | 6.4636e-4 |
88 | 88 | 0.267 |
89 | 89 | 0.506 |
9 | 9 | 0.324 |
90 | 90 | 0.0226 |
91 | 91 | 0.612 |
92 | 92 | 0.0136 |
93 | 93 | 0.316 |
94 | 94 | 0.751 |
95 | 95 | 0.0526 |
96 | 96 | 0.903 |
97 | 97 | 0.196 |
98 | 98 | 0.127 |
99 | 99 | 0.266 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11383
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000090 human light melanocyte sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000075 (columnar/cuboidal epithelial cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000325 (stuff accumulating cell)
0000147 (pigment cell)
0000710 (neurecto-epithelial cell)
0000255 (eukaryotic cell)
0002077 (ecto-epithelial cell)
0000148 (melanocyte)
0002567 (light melanocyte)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000090 (human light melanocyte sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000133 (neurectodermal cell)
CL:0000221 (ectodermal cell)