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{{f5samples
{{f5samples
|id=FF:12191-129B4
|DRA_sample_Accession=RNA-Seq@SAMD00013691
|name=CD8+ T Cells (pluriselect), donor090309, donation2
|accession_numbers=CAGE;DRX008065;DRR008937;DRZ000362;DRZ001747;DRZ011712;DRZ013097!RNA-Seq;DRX012348;DRR013796;DRZ002997;
|sample_id=12191
|ancestors_in_anatomy_facet=
|rna_tube_id=129B4
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0002371,CL:0000542,CL:0000219,CL:0000738,CL:0002087,CL:0002242,CL:0000255,CL:0000791,CL:0000084,CL:0000789,CL:0002419,CL:0000625
|rna_box=129
|rna_position=B4
|sample_cell_lot=090309-03
|sample_cell_catalog=
|sample_company=
|rna_lot_number=
|rna_catalog_number=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=blood
|sample_donor(cell lot)=
|sample_sex=
|sample_age=
|sample_ethnicity=
|rna_rin=
|rna_od260/230=1.1
|rna_od260/280=1.95
|sample_cell_type=T cell, CD8+
|sample_cell_line=
|sample_collaboration=Matched_genome_OSC(contact:Al Forrest)
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=
|rna_extraction_protocol=
|rna_weight_ug=1.87812
|rna_concentration=0.06956
|sample_note=
|profile_hcage=CNhs12178,LSID975,release011,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000037,CL:0000048,CL:0000051,CL:0000063,CL:0000084,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000542,CL:0000548,CL:0000566,CL:0000625,CL:0000723,CL:0000738,CL:0000789,CL:0000790,CL:0000791,CL:0000827,CL:0000837,CL:0000838,CL:0000988,CL:0002031,CL:0002032,CL:0002087,CL:0002320,CL:0002371,CL:0002419,CL:0002420
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000465,UBERON:0000479,UBERON:0001062,UBERON:0002384
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000030
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr3:27763807..27763822,-!p1@EOMES!1.93!84.64!EOMES;;chr2:192015701..192015743,-!p1@STAT4!1.92!110.68!STAT4;;chr2:68592406..68592424,+!p1@PLEK!1.89!76.18!PLEK;;chr5:133451294..133451310,+!p2@TCF7!1.85!69.67!TCF7;;chr17:45810594..45810608,+!p1@TBX21!1.82!65.11!TBX21;;chr7:50343634..50343717,+!p2@IKZF1!1.80!62.50!IKZF1;;chr4:109087445..109087463,-!p1@LEF1!1.76!55.99!LEF1;;chr2:192015750..192015793,-!p2@STAT4!1.70!65.76!STAT4;;chr3:63953435..63953499,+!p1@ATXN7!1.70!48.83!ATXN7;;chr1:25256756..25256774,-!p1@RUNX3!1.63!76.18!RUNX3;;chr2:68592394..68592405,+!p2@PLEK!1.62!41.02!PLEK;;chr9:117150254..117150271,-!p1@AKNA!1.61!104.17!AKNA;;chr5:133450365..133450444,+!p1@TCF7!1.60!168.63!TCF7;;chr17:37934365..37934387,-!p2@IKZF3!1.55!34.51!IKZF3;;chr14:75988771..75988826,+!p1@BATF!1.53!42.97!BATF;;chr2:231090433..231090469,+!p1@SP140!1.53!32.55!SP140;;chr20:50159198..50159299,-!p1@NFATC2!1.45!39.07!NFATC2;;chr19:16435625..16435682,+!p1@KLF2!1.41!767.63!KLF2;;chr5:133451347..133451358,+!p3@TCF7!1.40!24.09!TCF7;;chr19:19779619..19779670,+!p1@ZNF101!1.38!62.50!ZNF101;;chr3:18486354..18486377,-!p2@SATB1!1.37!28.00!SATB1;;chr4:109090075..109090095,-!p2@LEF1!1.31!19.53!LEF1;;chr20:56195474..56195506,-!p1@ZBP1!1.31!19.53!ZBP1;;chr3:71355163..71355209,-!p5@FOXP1!1.28!24.74!FOXP1;;chr4:57522166..57522260,-!p2@HOPX!1.27!20.18!HOPX;;chr7:50343895..50343936,+!p5@IKZF1!1.27!17.58!IKZF1;;chr3:71542615..71542644,-!p12@FOXP1!1.25!16.93!FOXP1;;chr17:38020392..38020477,-!p1@IKZF3!1.25!16.93!IKZF3;;chr15:60884706..60884743,-!p1@RORA!1.24!82.69!RORA;;chr8:67525443..67525459,-!p2@MYBL1!1.22!23.44!MYBL1;;chr4:57522598..57522664,-!p3@HOPX!1.22!15.63!HOPX;;chr2:231090471..231090504,+!p2@SP140!1.20!14.97!SP140;;chr4:109089901..109089930,-!p3@LEF1!1.20!14.97!LEF1;;chr17:37934204..37934241,-!p3@IKZF3!1.19!14.32!IKZF3;;chr17:38020516..38020544,-!p5@IKZF3!1.19!14.32!IKZF3;;chr2:97202991..97203043,+!p3@ARID5A!1.17!13.67!ARID5A;;chr1:26697243..26697258,-!p1@ZNF683!1.17!13.67!ZNF683;;chr11:128392085..128392232,-!p1@ETS1!1.16!446.64!ETS1;;chr4:109088089..109088101,-!p11@LEF1!1.15!13.02!LEF1;;chr3:71542684..71542720,-!p18@FOXP1!1.13!12.37!FOXP1;;chr17:37934280..37934299,-!p6@IKZF3!1.13!12.37!IKZF3;;chr13:41593425..41593480,-!p1@ELF1!1.12!76.83!ELF1;;chr17:38020557..38020572,-!p4@IKZF3!1.10!11.72!IKZF3;;chrX:106960285..106960299,-!p1@TSC22D3!1.09!301.45!TSC22D3;;chr6:91006518..91006570,-!p1@BACH2!1.09!26.04!BACH2;;chr11:128392273..128392308,-!p2@ETS1!1.08!46.88!ETS1;;chr1:25291475..25291511,-!p2@RUNX3!1.08!11.07!RUNX3;;chr20:52226313..52226350,-!p3@ZNF217!1.08!11.07!ZNF217;;chr4:57522674..57522699,-!p5@HOPX!1.08!11.07!HOPX;;chr6:106546808..106546833,+!p3@PRDM1!1.07!13.67!PRDM1;;chr19:38085768..38085821,+!p1@ZNF540!1.06!15.63!ZNF540;;chr1:92951607..92951661,-!p1@GFI1!1.06!10.42!GFI1;;chr16:89787937..89787971,+!p1@ZNF276!1.05!26.69!ZNF276;;chr9:3525727..3525828,-!p2@RFX3!1.05!26.69!RFX3;;chr11:128563948..128564003,+!p1@FLI1!1.04!122.40!FLI1;;chr13:74707894..74707947,-!p6@KLF12!1.04!11.07!KLF12;;chr21:36421347..36421380,-!p8@RUNX1!1.03!9.77!RUNX1;;chr7:50344251..50344288,+!p3@IKZF1!1.03!9.77!IKZF1;;chr16:68119324..68119364,+!p1@NFATC3!1.01!41.67!NFATC3;;chr17:38020481..38020506,-!p7@IKZF3!1.00!9.12!IKZF3;;chr14:64970670..64970712,-!p3@ZBTB25!0.99!19.53!ZBTB25;;chr17:36861675..36861697,+!p3@MLLT6!0.98!20.18!MLLT6;;chr14:99738138..99738163,-!p1@BCL11B!0.98!8.46!BCL11B;;chr3:71542651..71542683,-!p22@FOXP1!0.98!8.46!FOXP1;;chr6:391743..391759,+!p1@IRF4!0.98!8.46!IRF4;;chr7:50344144..50344157,+!p6@IKZF1!0.98!8.46!IKZF1;;chr7:50348268..50348366,+!p4@IKZF1!0.98!8.46!IKZF1;;chr20:56195525..56195556,-!p2@ZBP1!0.98!8.46!ZBP1;;chrX:101186981..101187030,-!p1@ZMAT1!0.97!28.00!ZMAT1;;chr16:88752889..88752921,-!p1@SNAI3!0.97!9.77!SNAI3;;chr21:36421535..36421610,-!p2@RUNX1!0.96!29.95!RUNX1;;chr18:5295679..5295734,-!p2@ZFP161!0.96!18.23!ZFP161;;chr14:69262947..69262986,-!p3@ZFP36L1!0.95!9.77!ZFP36L1;;chr6:45296048..45296082,+!p1@RUNX2!0.95!9.12!RUNX2;;chr14:75988831..75988847,+!p2@BATF!0.95!7.81!BATF;;chr16:89789271..89789291,+!p5@ZNF276!0.95!7.81!ZNF276;;chr10:8096631..8096660,+!p1@GATA3!0.93!9.12!GATA3;;chr8:60031619..60031676,-!p1@TOX!0.92!16.28!TOX;;chr4:81104895..81104920,+!p2@PRDM8!0.92!11.07!PRDM8;;chr4:109089573..109089585,-!p8@LEF1!0.91!7.16!LEF1;;chr4:57522513..57522548,-!p4@HOPX!0.91!7.16!HOPX;;chr7:50344289..50344323,+!p1@IKZF1!0.91!7.16!IKZF1;;chr19:20748574..20748599,-!p1@ZNF737!0.89!42.32!ZNF737;;chr6:42419649..42419673,-!p3@TRERF1!0.88!11.72!TRERF1;;chr17:46621311..46621332,-!p8@HOXB2!0.87!8.46!HOXB2;;chr19:53289995..53290050,-!p1@ZNF600!0.85!26.69!ZNF600;;chr3:71179699..71179744,-!p2@FOXP1!0.84!47.53!FOXP1;;chr19:53039233..53039247,+!p2@ZNF808!0.84!9.12!ZNF808;;chr3:18487057..18487105,-!p4@SATB1!0.84!5.86!SATB1;;chr4:109088130..109088163,-!p13@LEF1!0.84!5.86!LEF1;;chr6:106546786..106546802,+!p6@PRDM1!0.84!5.86!PRDM1;;chr7:137620650..137620677,-!p3@CREB3L2!0.84!5.86!CREB3L2;;chr15:60884747..60884774,-!p3@RORA!0.83!14.97!RORA;;chr8:67525473..67525518,-!p1@MYBL1!0.83!13.67!MYBL1;;chr19:58220517..58220583,-!p1@ZNF154!0.82!18.88!ZNF154;;chrX:131623982..131624011,-!p6@MBNL3!0.82!8.46!MBNL3;;chr8:72756023..72756055,-!p6@MSC!0.82!7.16!MSC;;chr2:148778973..148779035,+!p3@MBD5!0.81!14.97!MBD5;;chr4:185395633..185395651,-!p2@IRF2!0.81!9.12!IRF2;;chr9:117150303..117150312,-!p3@AKNA!0.81!7.16!AKNA;;chr10:8095593..8095625,+!p3@GATA3!0.81!6.51!GATA3;;chr10:8096772..8096787,+!p2@GATA3!0.81!6.51!GATA3;;chr19:19779686..19779697,+!p3@ZNF101!0.81!6.51!ZNF101;;chr8:123793860..123793921,+!p2@ZHX2!0.80!15.63!ZHX2;;chr5:131826457..131826514,-!p1@IRF1!0.79!220.07!IRF1;;chr19:36870087..36870110,-!p1@ZFP14!0.79!20.83!ZFP14;;chr11:128392309..128392350,-!p3@ETS1!0.79!13.02!ETS1;;chr19:19729477..19729542,-!p1@PBX4!0.79!11.72!PBX4;;chr16:89789248..89789270,+!p8@ZNF276!0.79!5.21!ZNF276;;chr19:22193731..22193751,-!p1@ZNF208!0.79!5.21!ZNF208;;chr2:100759037..100759058,-!p2@AFF3!0.79!5.21!AFF3;;chr2:231090344..231090361,-!p3@SP110!0.79!5.21!SP110;;chr3:71542747..71542766,-!p34@FOXP1!0.79!5.21!FOXP1;;chr4:149365827..149365870,-!p5@NR3C2!0.79!5.21!NR3C2;;chrX:47696239..47696254,+!p3@ZNF81!0.79!5.21!ZNF81;;chr19:9546177..9546224,-!p1@ZNF266!0.78!39.07!ZNF266;;chr16:68119440..68119480,+!p4@NFATC3!0.77!8.46!NFATC3;;chr11:13299319..13299424,+!p1@ARNTL!0.76!53.39!ARNTL;;chr2:178128250..178128293,-!p6@NFE2L2!0.76!13.02!NFE2L2;;chr14:64971288..64971316,-!p2@ZBTB25!0.75!15.63!ZBTB25;;chr6:91006575..91006602,-!p2@BACH2!0.75!7.16!BACH2;;chr14:90085458..90085557,-!p1@FOXN3!0.74!52.09!FOXN3;;chr4:38665769..38665801,+!p2@KLF3!0.74!44.92!KLF3;;chr8:67525524..67525543,-!p3@MYBL1!0.74!7.81!MYBL1;;chr19:49139477..49139552,-!p4@DBP!0.74!5.86!DBP;;chr1:25255763..25255774,-!p10@RUNX3!0.74!4.56!RUNX3;;chr3:18480217..18480239,-!p3@SATB1!0.74!4.56!SATB1;;chr4:109086281..109086319,-!p9@LEF1!0.74!4.56!LEF1;;chr4:109088940..109089037,-!p4@LEF1!0.74!4.56!LEF1;;chr4:109089996..109090012,-!p5@LEF1!0.74!4.56!LEF1;;chrX:134429952..134429971,-!p3@ZNF75D!0.74!4.56!ZNF75D;;chr11:128392265..128392267,-!p10@ETS1!0.74!4.56!ETS1;;chr17:37934392..37934398,-!p11@IKZF3!0.74!4.56!IKZF3;;chr19:9546227..9546257,-!p2@ZNF266!0.73!24.74!ZNF266;;chr19:58238958..58239000,-!p1@ZNF671!0.73!19.53!ZNF671;;chr16:3313791..3313834,+!p2@ZNF263!0.73!10.42!ZNF263;;chr17:36861735..36861755,+!p4@MLLT6!0.73!7.81!MLLT6;;chr19:49140609..49140643,-!p1@DBP!0.72!26.69!DBP;;chr19:49140572..49140594,-!p2@DBP!0.72!7.16!DBP;;chr9:3525867..3525902,-!p3@RFX3!0.71!15.63!RFX3;;chr14:69262789..69262822,-!p2@ZFP36L1!0.71!11.72!ZFP36L1;;chr9:114287433..114287513,+!p1@ZNF483!0.71!11.72!ZNF483;;chr20:44600199..44600219,-!p3@ZNF335!0.71!5.86!ZNF335;;chr6:143266297..143266356,-!p1@HIVEP2!0.70!21.49!HIVEP2;;chr19:49140595..49140607,-!p3@DBP!0.70!5.86!DBP;;chrX:131622958..131622978,-!p3@MBNL3!0.70!5.21!MBNL3;;chr3:18466787..18466839,-!p1@SATB1!0.69!19.53!SATB1;;chrX:131623932..131623964,-!p7@MBNL3!0.69!5.86!MBNL3;;chr2:242556880..242556899,-!p5@THAP4!0.69!3.91!THAP4;;chr3:27763383..27763413,-!p3@EOMES!0.69!3.91!EOMES;;chr3:71542827..71542838,-!p53@FOXP1!0.69!3.91!FOXP1;;chr4:149363475..149363492,-!p2@NR3C2!0.69!3.91!NR3C2;;chr15:67391010..67391046,+!p13@SMAD3!0.69!3.91!SMAD3;;chr17:38020607..38020621,-!p9@IKZF3!0.69!3.91!IKZF3;;chr7:150102756..150102772,+!p5@ZNF775!0.69!3.91!ZNF775;;chr1:26697189..26697205,-!p2@ZNF683!0.69!3.91!ZNF683;;chr21:36421147..36421193,-!p10@RUNX1!0.69!3.91!RUNX1;;chr11:47400078..47400106,-!p1@SPI1!0.69!3.91!SPI1;;chr7:77428066..77428132,+!p2@PHTF2!0.68!28.00!PHTF2;;chr16:79633894..79633954,-!p3@MAF!0.68!7.81!MAF;;chr19:44331461..44331482,+!p3@ZNF283!0.68!6.51!ZNF283;;chr19:19843900..19843928,-!p1@ZNF14!0.67!20.83!ZNF14;;chr19:38270215..38270251,-!p1@ZNF573!0.67!16.93!ZNF573;;chr19:9879350..9879419,-!p2@ZNF846!0.67!8.46!ZNF846;;chrX:131624056..131624069,-!p2@MBNL3!0.67!5.21!MBNL3;;chr2:97202480..97202499,+!p1@ARID5A!0.66!42.32!ARID5A;;chr4:4291837..4291859,-!p2@LYAR!0.66!13.02!LYAR;;chr19:52956798..52956843,+!p1@ZNF578!0.66!7.81!ZNF578;;chr7:150076370..150076396,+!p2@ZNF775!0.66!6.51!ZNF775;;chr3:141121847..141121868,+!p5@ZBTB38!0.66!5.86!ZBTB38;;chr16:68118689..68118733,+!p3@NFATC3!0.65!9.77!NFATC3;;chr7:64838786..64838809,+!p2@ZNF92!0.64!22.14!ZNF92;;chr19:58694742..58694800,+!p2@ZNF274!0.64!15.63!ZNF274;;chr19:19976634..19976677,+!p2@ZNF253!0.64!13.67!ZNF253;;chr9:115818951..115819011,-!p1@ZFP37!0.64!11.72!ZFP37;;chr19:12405606..12405629,-!p2@ZNF44!0.64!7.16!ZNF44;;chr19:37709076..37709154,+!p1@ZNF383!0.63!12.37!ZNF383;;chr19:52674696..52674758,-!p1@ZNF836!0.63!11.07!ZNF836;;chr15:31684663..31684717,+!p10@KLF13!0.63!3.26!KLF13;;chr17:56565257..56565283,-!p2@HSF5!0.63!3.26!HSF5;;chr6:106546731..106546755,+!p5@PRDM1!0.63!3.26!PRDM1;;chr6:29648890..29648944,-!p1@ZFP57!0.63!3.26!ZFP57;;chr7:50343864..50343888,+!p7@IKZF1!0.63!3.26!IKZF1;;chr7:63505799..63505904,+!p1@ZNF727!0.63!3.26!ZNF727;;chrX:47225841..47225861,+!p@chrX:47225841..47225861,+!0.63!3.26!ZNF157;;chr2:242556900..242556916,-!p6@THAP4!0.63!3.26!THAP4;;chr3:2776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chr19:22235279..22235301,+!p1@ZNF257!0.53!5.21!ZNF257;;chr19:12075844..12075880,+!p3@ZNF763!0.53!4.56!ZNF763;;chr9:20621927..20621996,-!p3@MLLT3!0.53!4.56!MLLT3;;chr16:30583169..30583200,-!p2@ZNF688!0.53!3.91!ZNF688;;chr2:8822176..8822196,+!p1@ID2!0.52!421.25!ID2;;chr19:52490043..52490113,-!p1@ZNF350!0.52!23.44!ZNF350;;chr2:61108695..61108753,+!p1@REL!0.52!20.18!REL;;chr19:56146352..56146420,+!p2@ZNF580,p2@ZNF581!0.52!19.53!ZNF580;;chr19:45004556..45004581,-!p1@ZNF180!0.52!17.58!ZNF180;;chr4:4291944..4292011,+!p1@ZBTB49!0.52!14.97!ZBTB49;;chr17:42298615..42298692,-!p2@UBTF!0.52!14.97!UBTF;;chr17:4981745..4981810,+!p1@ZFP3!0.52!14.32!ZFP3;;chr19:53836985..53837024,+!p1@ZNF845!0.52!14.32!ZNF845;;chr3:48282587..48282603,+!p1@ZNF589!0.52!13.02!ZNF589;;chr19:37569314..37569381,+!p1@ZNF420!0.52!10.42!ZNF420;;chr19:37862054..37862110,+!p1@ZNF527!0.52!7.81!ZNF527;;chr19:37958285..37958317,-!p3@ZNF569!0.52!7.16!ZNF569;;chr1:45805693..45805718,+!p3@TOE1!0.52!5.86!TOE1;;chr19:45004584..45004601,-!p2@ZNF180!0.52!5.21!ZNF180;;chr8:116681150..116681164,-!p5@TRPS1!0.52!5.21!TRPS1;;chr19:19779589..19779616,+!p2@ZNF101!0.52!5.21!ZNF101;;chr19:36909484..36909525,-!p2@ZFP82!0.52!5.21!ZFP82;;chr19:37464063..37464127,+!p2@ZNF568!0.52!3.26!ZNF568;;chr6:12009042..12009092,+!p6@HIVEP1!0.52!3.26!HIVEP1;;chr14:64971346..64971357,-!p9@ZBTB25!0.52!2.60!ZBTB25;;chr19:53466095..53466149,-!p1@ZNF321P,p1@ZNF816-ZNF321P,p1@ZNF816!0.51!11.72!ZNF816;;chr1:149871114..149871134,+!p3@BOLA1!0.51!11.07!BOLA1;;chr5:178450797..178450814,+!p1@ZNF879!0.51!7.16!ZNF879;;chr13:27998871..27998884,+!p4@GTF3A!0.51!3.91!GTF3A;;chr9:32550965..32551031,-!p4@TOPORS!0.51!3.91!TOPORS;;chr8:128747661..128747703,+!p6@MYC!0.51!3.26!MYC;;chr17:42295897..42295953,-!p10@UBTF!0.51!3.26!UBTF;;chr1:22778337..22778356,+!p1@ZBTB40!0.50!34.51!ZBTB40;;chr19:7069690..7069726,+!p1@ZNF557!0.50!26.69!ZNF557;;chr16:29819403..29819442,+!p5@MAZ!0.50!23.44!MAZ;;chr6:20403826..20403886,+!p2@E2F3!0.50!13.67!E2F3;;chr19:12595586..12595637,-!p2@ZNF709!0.50!11.07!ZNF709;;chrX:129244840..129244881,-!p2@ELF4!0.50!10.42!ELF4;;chr3:114866084..114866118,-!p2@ZBTB20!0.50!9.77!ZBTB20;;chr19:11877838..11877915,+!p1@ZNF441!0.50!8.46!ZNF441;;chr19:23941680..23941704,-!p1@ZNF681!0.50!7.81!ZNF681;;chr1:211432887..211432903,+!p4@RCOR3!0.50!5.86!RCOR3;;chr1:158979686..158979745,+!p1@IFI16!0.49!93.10!IFI16;;chr7:104654623..104654669,+!p1@MLL5!0.49!75.53!MLL5;;chr10:21823128..21823216,+!p1@MLLT10!0.49!24.74!MLLT10;;chr17:40440481..40440550,+!p1@STAT5A!0.49!19.53!STAT5A;;chr2:95831389..95831432,-!p1@ZNF514!0.49!11.72!ZNF514;;chr19:35225078..35225120,+!p2@ZNF181!0.49!5.86!ZNF181;;chr3:18466660..18466676,-!p5@SATB1!0.49!2.60!SATB1;;chr19:23578226..23578285,-!p1@ZNF91!0.48!46.23!ZNF91;;chr7:99097863..99097936,-!p1@ZNF394!0.48!27.35!ZNF394;;chr16:88519669..88519726,+!p1@ZFPM1!0.48!24.09!ZFPM1;;chr2:113033164..113033219,+!p1@ZC3H6!0.48!22.79!ZC3H6;;chr7:64126503..64126528,+!p1@ZNF107!0.48!18.88!ZNF107;;chr19:58144529..58144579,+!p1@ZNF211!0.48!14.32!ZNF211;;chrX:134477924..134477988,-!p1@ZNF75D!0.48!9.77!ZNF75D;;chr4:57775059..57775139,+!p2@REST!0.48!9.12!REST;;chr13:74708029..74708077,-!p2@KLF12!0.48!7.16!KLF12;;chr19:36980455..36980469,-!p2@ZNF566!0.48!5.21!ZNF566;;chr19:37341160..37341194,-!p2@ZNF790!0.48!5.21!ZNF790;;chr19:35417798..35417842,+!p1@ZNF30!0.48!3.91!ZNF30;;chr2:231280908..231280945,+!p1@SP100!0.47!102.87!SP100;;chr4:467892..467963,-!p1@ABCA11P,p1@ZNF721!0.47!67.71!ZNF721;;chr1:8585945..8586056,-!p3@RERE!0.47!8.46!RERE;;chr6:44233297..44233330,-!p2@NFKBIE!0.47!6.51!NFKBIE;;chr19:12476469..12476509,-!p2@ZNF442!0.47!3.91!ZNF442;;chr17:37934268..37934277,-!p10@IKZF3!0.47!1.95!IKZF3;;chr17:41738684..41738704,-!p2@MEOX1!0.47!1.95!MEOX1;;chr17:45810816..45810838,+!p2@TBX21!0.47!1.95!TBX21;;chr19:35454968..35454984,-!p3@ZNF792!0.47!1.95!ZNF792;;chr19:37464453..37464515,+!p4@ZNF568!0.47!1.95!ZNF568;;chr2:214016254..214016282,-!p7@IKZF2!0.47!1.95!IKZF2;;chr3:71353892..71353928,-!p31@FOXP1!0.47!1.95!FOXP1;;chr4:109088863..109088887,-!p24@LEF1!0.47!1.95!LEF1;;chr4:109089095..109089144,-!p6@LEF1!0.47!1.95!LEF1;;chr10:35416172..35416184,+!p13@CREM!0.47!1.95!CREM;;chr10:8097591..8097627,+!p7@GATA3!0.47!1.95!GATA3;;chr13:41593493..41593506,-!p8@ELF1!0.47!1.95!ELF1;;chr5:133450458..133450469,+!p4@TCF7!0.47!1.95!TCF7;;chr6:106546834..106546850,+!p4@PRDM1!0.47!1.95!PRDM1;;chr6:91006503..91006517,-!p3@BACH2!0.47!1.95!BACH2;;chr7:50343800..50343811,+!p8@IKZF1!0.47!1.95!IKZF1;;chr8:67525467..67525472,-!p4@MYBL1!0.47!1.95!MYBL1;;chr8:72755987..72756002,-!p7@MSC!0.47!1.95!MSC;;chr1:25291620..25291635,-!p4@RUNX3!0.47!1.95!RUNX3;;chr1:61542922..61542955,+!p10@NFIA!0.47!1.95!NFIA;;chr20:56195509..56195520,-!p3@ZBP1!0.47!1.95!ZBP1;;chr21:36421237..36421252,-!p33@RUNX1!0.47!1.95!RUNX1;;chr21:36421401..36421414,-!p16@RUNX1!0.47!1.95!RUNX1;;chr2:220094514..220094599,+!p1@ANKZF1!0.46!75.53!ANKZF1;;chr3:141121164..141121249,+!p1@ZBTB38!0.46!44.92!ZBTB38;;chr6:87865262..87865311,+!p1@ZNF292!0.46!34.51!ZNF292;;chr8:28747884..2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|ffid_belonging_in_development=CL:0000134,CL:0000051,CL:0000790
|fonse_cell_line=
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|fonse_cell_line_closure=
Line 66: Line 41:
|fonse_treatment=
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|fonse_treatment_closure=
|fonse_treatment_closure=
|top_motifs=
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|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD8%252b%2520T%2520Cells%2520%2528pluriselect%2529%252c%2520donor090309%252c%2520donation2.CNhs12178.12191-129B4.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD8%252b%2520T%2520Cells%2520%2528pluriselect%2529%252c%2520donor090309%252c%2520donation2.CNhs12178.12191-129B4.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/CD8%252b%2520T%2520Cells%2520%2528pluriselect%2529%252c%2520donor090309%252c%2520donation2.CNhs12178.12191-129B4.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/CD8%252b%2520T%2520Cells%2520%2528pluriselect%2529%252c%2520donor090309%252c%2520donation2.CNhs12178.12191-129B4.hg38.nobarcode.ctss.bed.gz
|id=FF:12191-129B4
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|library_id=CNhs12178!RDhi10015
|library_id_phase_based=2:CNhs12178
|microRNAs=
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|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;12191
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;12191
|name=CD8+ T Cells (pluriselect), donor090309, donation2
|namespace=FANTOM5
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|rna_box=129
|rna_catalog_number=
|rna_concentration=0.06956
|rna_extraction_protocol=
|rna_lot_number=
|rna_od260/230=1.1
|rna_od260/280=1.95
|rna_position=B4
|rna_rin=
|rna_sample_type=
|rna_tube_id=129B4
|rna_weight_ug=1.87812
|sample_age=
|sample_category=primary cells
|sample_cell_catalog=
|sample_cell_line=
|sample_cell_lot=090309-03
|sample_cell_type=T cell, CD8+
|sample_collaboration=Matched_genome_OSC(contact:Al Forrest)
|sample_company=
|sample_description=
|sample_dev_stage=
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;8.02057681425716e-220!GO:0043227;membrane-bound organelle;2.53779726799415e-194!GO:0043231;intracellular membrane-bound organelle;5.99603653277001e-194!GO:0043226;organelle;3.45294758652359e-179!GO:0043229;intracellular organelle;1.53568661768104e-178!GO:0005737;cytoplasm;8.00802233554064e-134!GO:0044422;organelle part;4.31506299772528e-115!GO:0044446;intracellular organelle part;2.30709174440719e-113!GO:0032991;macromolecular complex;3.83331973662558e-97!GO:0044444;cytoplasmic part;5.86249585031825e-97!GO:0005634;nucleus;2.50321708940508e-96!GO:0043170;macromolecule metabolic process;1.43501507845994e-94!GO:0044237;cellular metabolic process;2.75793544340684e-94!GO:0030529;ribonucleoprotein complex;5.68114854403066e-90!GO:0044238;primary metabolic process;6.01245016269459e-89!GO:0003723;RNA binding;1.27014340553973e-77!GO:0044428;nuclear part;1.26556326262599e-76!GO:0043233;organelle lumen;2.00923825417348e-67!GO:0031974;membrane-enclosed lumen;2.00923825417348e-67!GO:0043283;biopolymer metabolic process;5.22709364353081e-63!GO:0005739;mitochondrion;2.1659193375158e-60!GO:0010467;gene expression;9.66149928382956e-59!GO:0006396;RNA processing;1.84591134290786e-56!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.40077159943126e-52!GO:0006412;translation;2.77461380834601e-51!GO:0005840;ribosome;5.79913235004488e-51!GO:0005515;protein binding;9.40404437569498e-49!GO:0019538;protein metabolic process;3.0421511045721e-48!GO:0033036;macromolecule localization;5.90486979738201e-47!GO:0043234;protein complex;1.14142526380938e-46!GO:0031981;nuclear lumen;1.19746974542505e-46!GO:0044267;cellular protein metabolic process;2.5541063531689e-46!GO:0044260;cellular macromolecule metabolic process;1.20540674766607e-45!GO:0016071;mRNA metabolic process;3.93245422546763e-45!GO:0015031;protein transport;9.48206203125127e-45!GO:0003735;structural constituent of ribosome;2.61801763530733e-44!GO:0045184;establishment of protein localization;1.2555438000619e-43!GO:0008104;protein localization;2.85708362670923e-43!GO:0044429;mitochondrial part;5.40788416484767e-43!GO:0031090;organelle membrane;1.54104449255463e-40!GO:0008380;RNA splicing;2.42428127016132e-40!GO:0006397;mRNA processing;2.09023684030735e-39!GO:0009059;macromolecule biosynthetic process;3.65772155962686e-39!GO:0003676;nucleic acid binding;1.18917925990328e-38!GO:0031967;organelle envelope;3.21060884463754e-38!GO:0033279;ribosomal subunit;3.21060884463754e-38!GO:0031975;envelope;6.79245601928046e-38!GO:0005829;cytosol;2.48819956957174e-32!GO:0046907;intracellular transport;2.89925419855616e-32!GO:0022613;ribonucleoprotein complex biogenesis and assembly;6.05057135685925e-32!GO:0016070;RNA metabolic process;9.3449994412486e-31!GO:0044249;cellular biosynthetic process;1.32281731820283e-30!GO:0005681;spliceosome;2.21443016924736e-30!GO:0006886;intracellular protein transport;3.1040153278612e-30!GO:0009058;biosynthetic process;3.35219190772455e-30!GO:0016043;cellular component organization and biogenesis;1.54082276993799e-29!GO:0006259;DNA metabolic process;2.32350180006608e-29!GO:0005654;nucleoplasm;5.87968443214057e-29!GO:0065003;macromolecular complex assembly;1.60133289740204e-28!GO:0005830;cytosolic ribosome (sensu Eukaryota);3.2845755194075e-28!GO:0005740;mitochondrial envelope;1.70024006279082e-26!GO:0019866;organelle inner membrane;4.80837650417472e-26!GO:0044445;cytosolic part;6.60077764980073e-26!GO:0031966;mitochondrial membrane;1.0822267852819e-25!GO:0022607;cellular component assembly;2.07177078539834e-25!GO:0005743;mitochondrial inner membrane;5.8336365092393e-24!GO:0000166;nucleotide binding;1.99644973161831e-23!GO:0006512;ubiquitin cycle;2.02939150404443e-23!GO:0051641;cellular localization;2.4820780677034e-23!GO:0051649;establishment of cellular localization;4.50257176407106e-23!GO:0044451;nucleoplasm part;1.41126646790392e-22!GO:0006996;organelle organization and biogenesis;1.09574304326808e-21!GO:0006119;oxidative phosphorylation;3.74292850499754e-21!GO:0044455;mitochondrial membrane part;2.71901507427353e-20!GO:0015934;large ribosomal subunit;1.29180016784534e-19!GO:0015935;small ribosomal subunit;1.40302290790024e-19!GO:0022618;protein-RNA complex assembly;1.99540915204851e-19!GO:0016874;ligase activity;3.25183988841055e-19!GO:0031980;mitochondrial lumen;3.64545355291886e-19!GO:0005759;mitochondrial matrix;3.64545355291886e-19!GO:0044265;cellular macromolecule catabolic process;4.0870835536987e-19!GO:0005730;nucleolus;4.22887348097509e-19!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;4.88496116270805e-18!GO:0051603;proteolysis involved in cellular protein catabolic process;5.15846413986137e-18!GO:0016462;pyrophosphatase activity;5.56073295100096e-18!GO:0016817;hydrolase activity, acting on acid anhydrides;6.40678083342519e-18!GO:0019941;modification-dependent protein catabolic process;8.92294874410583e-18!GO:0043632;modification-dependent macromolecule catabolic process;8.92294874410583e-18!GO:0012501;programmed cell death;1.05153187449856e-17!GO:0044257;cellular protein catabolic process;1.17540843787176e-17!GO:0017111;nucleoside-triphosphatase activity;1.56308731206299e-17!GO:0006915;apoptosis;1.6134922040785e-17!GO:0006511;ubiquitin-dependent protein catabolic process;1.73174701321606e-17!GO:0043412;biopolymer modification;2.23912231459875e-17!GO:0043228;non-membrane-bound organelle;2.92138591155994e-17!GO:0043232;intracellular non-membrane-bound organelle;2.92138591155994e-17!GO:0008219;cell death;4.91291810259433e-17!GO:0016265;death;4.91291810259433e-17!GO:0006457;protein folding;6.34333581979882e-17!GO:0016604;nuclear body;1.4314497211147e-16!GO:0006605;protein targeting;1.44388828645669e-16!GO:0043285;biopolymer catabolic process;1.45740330095401e-16!GO:0032553;ribonucleotide binding;1.61259504098893e-16!GO:0032555;purine ribonucleotide binding;1.61259504098893e-16!GO:0005746;mitochondrial respiratory chain;1.96039537789098e-16!GO:0008135;translation factor activity, nucleic acid binding;3.51840081602166e-16!GO:0017076;purine nucleotide binding;6.19800339373763e-16!GO:0000398;nuclear mRNA splicing, via spliceosome;2.80552016218197e-15!GO:0000375;RNA splicing, via transesterification reactions;2.80552016218197e-15!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.80552016218197e-15!GO:0000502;proteasome complex (sensu Eukaryota);3.08780863683281e-15!GO:0009057;macromolecule catabolic process;4.22152330282736e-15!GO:0006464;protein modification process;5.63822836431435e-15!GO:0012505;endomembrane system;5.67571993811377e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.42359886485192e-14!GO:0050136;NADH dehydrogenase (quinone) activity;1.42359886485192e-14!GO:0003954;NADH dehydrogenase activity;1.42359886485192e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.42359886485192e-14!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.50872337734726e-14!GO:0051276;chromosome organization and biogenesis;1.75012539955011e-14!GO:0006325;establishment and/or maintenance of chromatin architecture;1.75026080464295e-14!GO:0006974;response to DNA damage stimulus;2.11887563220814e-14!GO:0016887;ATPase activity;2.18704025622719e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.60544877253401e-14!GO:0042623;ATPase activity, coupled;3.14166839997293e-14!GO:0005524;ATP binding;4.97187086167525e-14!GO:0005761;mitochondrial ribosome;7.17997557230205e-14!GO:0000313;organellar ribosome;7.17997557230205e-14!GO:0006323;DNA packaging;7.35443227783717e-14!GO:0032559;adenyl ribonucleotide binding;1.82909167853313e-13!GO:0006913;nucleocytoplasmic transport;1.87503555326903e-13!GO:0042254;ribosome biogenesis and assembly;1.88318859070129e-13!GO:0043687;post-translational protein modification;2.11034216213511e-13!GO:0016607;nuclear speck;2.14016962740713e-13!GO:0051169;nuclear transport;3.0576485799227e-13!GO:0006281;DNA repair;4.02712421509306e-13!GO:0042775;organelle ATP synthesis coupled electron transport;4.52851965764039e-13!GO:0042773;ATP synthesis coupled electron transport;4.52851965764039e-13!GO:0030554;adenyl nucleotide binding;8.76913393203435e-13!GO:0030964;NADH dehydrogenase complex (quinone);8.76913393203435e-13!GO:0045271;respiratory chain complex I;8.76913393203435e-13!GO:0005747;mitochondrial respiratory chain complex I;8.76913393203435e-13!GO:0008134;transcription factor binding;9.21634629840703e-13!GO:0030163;protein catabolic process;1.03251524394615e-12!GO:0005635;nuclear envelope;1.28239983020228e-12!GO:0003743;translation initiation factor activity;2.0591679827949e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.72758700195727e-12!GO:0044248;cellular catabolic process;3.21866923943666e-12!GO:0042981;regulation of apoptosis;4.57434588912827e-12!GO:0043067;regulation of programmed cell death;5.05859431016575e-12!GO:0031965;nuclear membrane;6.0554548126387e-12!GO:0006413;translational initiation;7.68106989591597e-12!GO:0048193;Golgi vesicle transport;1.24732851949113e-11!GO:0004386;helicase activity;1.41405174874144e-11!GO:0050794;regulation of cellular process;1.45695760490023e-11!GO:0051082;unfolded protein binding;2.83421962091827e-11!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;3.56626013953423e-11!GO:0048770;pigment granule;3.58835304911393e-11!GO:0042470;melanosome;3.58835304911393e-11!GO:0007049;cell cycle;7.91448684692975e-11!GO:0008639;small protein conjugating enzyme activity;1.3053847405044e-10!GO:0006446;regulation of translational initiation;2.07183779994432e-10!GO:0017038;protein import;2.10020245503985e-10!GO:0004842;ubiquitin-protein ligase activity;2.53206190757639e-10!GO:0006333;chromatin assembly or disassembly;2.54352360927627e-10!GO:0051186;cofactor metabolic process;2.60473875127548e-10!GO:0065004;protein-DNA complex assembly;3.23391939824454e-10!GO:0008026;ATP-dependent helicase activity;4.44205757054998e-10!GO:0016568;chromatin modification;4.55205011584633e-10!GO:0044453;nuclear membrane part;4.90738463964258e-10!GO:0019787;small conjugating protein ligase activity;4.90738463964258e-10!GO:0005694;chromosome;5.6526865300848e-10!GO:0006399;tRNA metabolic process;9.35873564491065e-10!GO:0016072;rRNA metabolic process;1.06293791942312e-09!GO:0019222;regulation of metabolic process;1.27973198321078e-09!GO:0006364;rRNA processing;1.49283853343134e-09!GO:0019829;cation-transporting ATPase activity;1.57858388119674e-09!GO:0005794;Golgi apparatus;1.57858388119674e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.9334658529607e-09!GO:0050657;nucleic acid transport;3.7989914482164e-09!GO:0051236;establishment of RNA localization;3.7989914482164e-09!GO:0050658;RNA transport;3.7989914482164e-09!GO:0006403;RNA localization;4.6804952629366e-09!GO:0009259;ribonucleotide metabolic process;7.60140985967307e-09!GO:0030532;small nuclear ribonucleoprotein complex;1.13447588019121e-08!GO:0006164;purine nucleotide biosynthetic process;1.18648596110309e-08!GO:0016192;vesicle-mediated transport;1.36756240591414e-08!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.39973605951074e-08!GO:0009260;ribonucleotide biosynthetic process;1.59454042366208e-08!GO:0044427;chromosomal part;1.70105959306752e-08!GO:0005643;nuclear pore;1.71084654898834e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.71982214987672e-08!GO:0009719;response to endogenous stimulus;1.74439347787745e-08!GO:0015078;hydrogen ion transmembrane transporter activity;1.81028760826806e-08!GO:0005839;proteasome core complex (sensu Eukaryota);2.0054430824005e-08!GO:0006163;purine nucleotide metabolic process;2.02303676751957e-08!GO:0022402;cell cycle process;2.27167257392504e-08!GO:0006732;coenzyme metabolic process;2.57824572509752e-08!GO:0065002;intracellular protein transport across a membrane;2.67729704899787e-08!GO:0009152;purine ribonucleotide biosynthetic process;2.67745962737666e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.92132145000355e-08!GO:0043566;structure-specific DNA binding;4.05123213324289e-08!GO:0009060;aerobic respiration;4.63534676856469e-08!GO:0009150;purine ribonucleotide metabolic process;4.93472667567838e-08!GO:0008565;protein transporter activity;5.06509689712087e-08!GO:0031323;regulation of cellular metabolic process;5.90657358751035e-08!GO:0016881;acid-amino acid ligase activity;6.06502220395622e-08!GO:0004298;threonine endopeptidase activity;6.61613150718931e-08!GO:0016787;hydrolase activity;7.1645608568274e-08!GO:0003712;transcription cofactor activity;7.67209704354842e-08!GO:0005768;endosome;8.15302770094994e-08!GO:0000785;chromatin;9.64806168432165e-08!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.1900622595873e-07!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.20517548119034e-07!GO:0051028;mRNA transport;1.29910248408293e-07!GO:0044432;endoplasmic reticulum part;1.37058025766954e-07!GO:0051726;regulation of cell cycle;1.38204228625566e-07!GO:0003697;single-stranded DNA binding;1.39511325413456e-07!GO:0015986;ATP synthesis coupled proton transport;1.4016582417508e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.4016582417508e-07!GO:0050789;regulation of biological process;1.53651041939946e-07!GO:0006350;transcription;2.01769145010012e-07!GO:0000074;regulation of progression through cell cycle;2.03058560326104e-07!GO:0016779;nucleotidyltransferase activity;2.1712251511572e-07!GO:0006888;ER to Golgi vesicle-mediated transport;2.57442023895315e-07!GO:0000245;spliceosome assembly;2.89311574040665e-07!GO:0006793;phosphorus metabolic process;2.89689036862163e-07!GO:0006796;phosphate metabolic process;2.89689036862163e-07!GO:0009055;electron carrier activity;3.3178943223477e-07!GO:0008270;zinc ion binding;3.58129900496306e-07!GO:0045333;cellular respiration;3.81903483442854e-07!GO:0000151;ubiquitin ligase complex;4.66847270860763e-07!GO:0042175;nuclear envelope-endoplasmic reticulum network;5.11380012219489e-07!GO:0051170;nuclear import;5.13856730633015e-07!GO:0005783;endoplasmic reticulum;5.29399225992469e-07!GO:0046930;pore complex;5.6039823906056e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;7.84456447301612e-07!GO:0006754;ATP biosynthetic process;9.04032607888835e-07!GO:0006753;nucleoside phosphate metabolic process;9.04032607888835e-07!GO:0005789;endoplasmic reticulum membrane;9.42151913247062e-07!GO:0006606;protein import into nucleus;9.77834731465559e-07!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;1.08257622267713e-06!GO:0015399;primary active transmembrane transporter activity;1.08257622267713e-06!GO:0009142;nucleoside triphosphate biosynthetic process;1.08899607945307e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.08899607945307e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.10862532730179e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.10862532730179e-06!GO:0016310;phosphorylation;1.26426722379439e-06!GO:0031497;chromatin assembly;1.26903671599695e-06!GO:0006334;nucleosome assembly;1.43743628547274e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.45839172860517e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.52364514546378e-06!GO:0009199;ribonucleoside triphosphate metabolic process;1.77411055614428e-06!GO:0009141;nucleoside triphosphate metabolic process;1.85032077302387e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.85032077302387e-06!GO:0009144;purine nucleoside triphosphate metabolic process;1.85032077302387e-06!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.92817033472871e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.92817033472871e-06!GO:0004812;aminoacyl-tRNA ligase activity;1.92817033472871e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.92817033472871e-06!GO:0032446;protein modification by small protein conjugation;2.03198462545632e-06!GO:0010468;regulation of gene expression;2.06311248961637e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;2.07340369365413e-06!GO:0003724;RNA helicase activity;2.25231111095329e-06!GO:0046034;ATP metabolic process;2.34502778678621e-06!GO:0051246;regulation of protein metabolic process;2.46307085723261e-06!GO:0045259;proton-transporting ATP synthase complex;2.53558188552857e-06!GO:0006917;induction of apoptosis;2.56854051348949e-06!GO:0007243;protein kinase cascade;3.10606652422959e-06!GO:0003713;transcription coactivator activity;3.26045011671708e-06!GO:0043038;amino acid activation;3.36210011234876e-06!GO:0006418;tRNA aminoacylation for protein translation;3.36210011234876e-06!GO:0043039;tRNA aminoacylation;3.36210011234876e-06!GO:0009056;catabolic process;3.49361777439616e-06!GO:0007005;mitochondrion organization and biogenesis;3.69013868970576e-06!GO:0016740;transferase activity;3.83033566384069e-06!GO:0012502;induction of programmed cell death;3.90717063325954e-06!GO:0006260;DNA replication;4.46907702498643e-06!GO:0006916;anti-apoptosis;4.61404332993268e-06!GO:0051188;cofactor biosynthetic process;4.92356691289746e-06!GO:0016567;protein ubiquitination;5.10089447914879e-06!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;5.50737268717699e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;6.03836484618149e-06!GO:0030120;vesicle coat;6.08130418524492e-06!GO:0030662;coated vesicle membrane;6.08130418524492e-06!GO:0006099;tricarboxylic acid cycle;6.15071545482956e-06!GO:0046356;acetyl-CoA catabolic process;6.15071545482956e-06!GO:0005793;ER-Golgi intermediate compartment;7.51923239395278e-06!GO:0009615;response to virus;7.75132828103327e-06!GO:0006084;acetyl-CoA metabolic process;9.03375237720344e-06!GO:0043065;positive regulation of apoptosis;9.25342610214925e-06!GO:0006613;cotranslational protein targeting to membrane;9.66105879363263e-06!GO:0048475;coated membrane;9.70387713692949e-06!GO:0030117;membrane coat;9.70387713692949e-06!GO:0051168;nuclear export;1.06122859166375e-05!GO:0043069;negative regulation of programmed cell death;1.19064504136674e-05!GO:0043068;positive regulation of programmed cell death;1.3227957892913e-05!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.40511094750645e-05!GO:0006461;protein complex assembly;1.41414743161393e-05!GO:0008632;apoptotic program;1.52344899623323e-05!GO:0005770;late endosome;1.81444120331034e-05!GO:0045786;negative regulation of progression through cell cycle;2.13605160386049e-05!GO:0043066;negative regulation of apoptosis;2.19931034396535e-05!GO:0048523;negative regulation of cellular process;2.25277883567271e-05!GO:0043492;ATPase activity, coupled to movement of substances;2.26696544577632e-05!GO:0065009;regulation of a molecular function;2.37764998242367e-05!GO:0032774;RNA biosynthetic process;2.39624157626456e-05!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;2.43512816760346e-05!GO:0046914;transition metal ion binding;2.8411004372491e-05!GO:0006351;transcription, DNA-dependent;3.09469150881173e-05!GO:0005762;mitochondrial large ribosomal subunit;3.43525560537306e-05!GO:0000315;organellar large ribosomal subunit;3.43525560537306e-05!GO:0003899;DNA-directed RNA polymerase activity;3.50115797141928e-05!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;3.50115797141928e-05!GO:0006401;RNA catabolic process;3.97457494666544e-05!GO:0016563;transcription activator activity;4.1784381570764e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;4.1784381570764e-05!GO:0043623;cellular protein complex assembly;4.21782789456648e-05!GO:0009109;coenzyme catabolic process;4.2936646054983e-05!GO:0044431;Golgi apparatus part;4.39870165181551e-05!GO:0008234;cysteine-type peptidase activity;4.41055787136515e-05!GO:0009108;coenzyme biosynthetic process;5.65794633084935e-05!GO:0045449;regulation of transcription;6.37689372653119e-05!GO:0005813;centrosome;6.49313025175773e-05!GO:0006612;protein targeting to membrane;6.7485260769439e-05!GO:0008186;RNA-dependent ATPase activity;7.04191101550865e-05!GO:0006752;group transfer coenzyme metabolic process;8.42374374960644e-05!GO:0016363;nuclear matrix;8.64815514476124e-05!GO:0001772;immunological synapse;8.70362482032424e-05!GO:0005525;GTP binding;0.000106112717406166!GO:0006366;transcription from RNA polymerase II promoter;0.000110102597048856!GO:0051187;cofactor catabolic process;0.000131302397429294!GO:0006402;mRNA catabolic process;0.000132568581895593!GO:0031324;negative regulation of cellular metabolic process;0.000141592480866769!GO:0000278;mitotic cell cycle;0.000142219279483059!GO:0044440;endosomal part;0.000144556350758311!GO:0010008;endosome membrane;0.000144556350758311!GO:0008033;tRNA processing;0.000160881577107861!GO:0019899;enzyme binding;0.000174280815107679!GO:0005773;vacuole;0.000190462473183447!GO:0000314;organellar small ribosomal subunit;0.000202410891900278!GO:0005763;mitochondrial small ribosomal subunit;0.000202410891900278!GO:0043681;protein import into mitochondrion;0.000214632146747497!GO:0009117;nucleotide metabolic process;0.000220725476407087!GO:0004004;ATP-dependent RNA helicase activity;0.000227881949634375!GO:0005885;Arp2/3 protein complex;0.000229150162989282!GO:0003729;mRNA binding;0.000229150162989282!GO:0005815;microtubule organizing center;0.000238965224179486!GO:0065007;biological regulation;0.000246839848503707!GO:0006310;DNA recombination;0.000256405301905215!GO:0016564;transcription repressor activity;0.000287325795584421!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000296449673039458!GO:0043021;ribonucleoprotein binding;0.000306991012461022!GO:0006352;transcription initiation;0.000346040926651799!GO:0007242;intracellular signaling cascade;0.000356048172170337!GO:0003690;double-stranded DNA binding;0.000361760751148724!GO:0048519;negative regulation of biological process;0.000385260626129973!GO:0003677;DNA binding;0.000427105534978584!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000428142373928981!GO:0006818;hydrogen transport;0.000429986192408747!GO:0005798;Golgi-associated vesicle;0.00043358480538578!GO:0015992;proton transport;0.000435437902140777!GO:0030384;phosphoinositide metabolic process;0.000502038251997787!GO:0044452;nucleolar part;0.000523397059459193!GO:0016197;endosome transport;0.000540430347880616!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000616000610381637!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00062356142551012!GO:0000323;lytic vacuole;0.00062356142551012!GO:0005764;lysosome;0.00062356142551012!GO:0031072;heat shock protein binding;0.000628598946694432!GO:0006891;intra-Golgi vesicle-mediated transport;0.000642401659117225!GO:0006355;regulation of transcription, DNA-dependent;0.000673283731918321!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000699977538130312!GO:0051427;hormone receptor binding;0.000737462411123484!GO:0016251;general RNA polymerase II transcription factor activity;0.000746528793131027!GO:0006417;regulation of translation;0.000802422489073282!GO:0046489;phosphoinositide biosynthetic process;0.000834896729674347!GO:0000139;Golgi membrane;0.000853176324814003!GO:0032561;guanyl ribonucleotide binding;0.000863951462331395!GO:0019001;guanyl nucleotide binding;0.000863951462331395!GO:0000786;nucleosome;0.000877800230839287!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000878221670732899!GO:0008654;phospholipid biosynthetic process;0.000940015389099045!GO:0006261;DNA-dependent DNA replication;0.00100031715792217!GO:0042101;T cell receptor complex;0.00105966308245655!GO:0004518;nuclease activity;0.00106312426344895!GO:0009892;negative regulation of metabolic process;0.00114245467131675!GO:0016481;negative regulation of transcription;0.0012234636062715!GO:0006383;transcription from RNA polymerase III promoter;0.00124508949555748!GO:0005769;early endosome;0.00129390745361768!GO:0004674;protein serine/threonine kinase activity;0.00136810559443315!GO:0035257;nuclear hormone receptor binding;0.00141966367105921!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00144220703770078!GO:0022890;inorganic cation transmembrane transporter activity;0.00147559482548165!GO:0003924;GTPase activity;0.00148946558250548!GO:0005667;transcription factor complex;0.00155113807494747!GO:0022415;viral reproductive process;0.00159463394430407!GO:0004527;exonuclease activity;0.00161855779678405!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00163753990628442!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00163753990628442!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00163753990628442!GO:0007006;mitochondrial membrane organization and biogenesis;0.00167637855980517!GO:0015631;tubulin binding;0.00183240417291206!GO:0051301;cell division;0.00189931905589782!GO:0016859;cis-trans isomerase activity;0.00189931905589782!GO:0005684;U2-dependent spliceosome;0.00198573779238118!GO:0031326;regulation of cellular biosynthetic process;0.00200632433243891!GO:0006650;glycerophospholipid metabolic process;0.00207788754867223!GO:0051252;regulation of RNA metabolic process;0.00224910718333709!GO:0042802;identical protein binding;0.00235092880833992!GO:0007034;vacuolar transport;0.00237232369761311!GO:0006414;translational elongation;0.00247756180574315!GO:0051539;4 iron, 4 sulfur cluster binding;0.00254148766002814!GO:0019867;outer membrane;0.0025459681434274!GO:0000087;M phase of mitotic cell cycle;0.00260081401247101!GO:0046474;glycerophospholipid biosynthetic process;0.00263780196070138!GO:0007264;small GTPase mediated signal transduction;0.0027374151901671!GO:0009967;positive regulation of signal transduction;0.00282773232365764!GO:0006626;protein targeting to mitochondrion;0.00291781770573641!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00295837236305071!GO:0015002;heme-copper terminal oxidase activity;0.00295837236305071!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00295837236305071!GO:0004129;cytochrome-c oxidase activity;0.00295837236305071!GO:0016853;isomerase activity;0.00302551856762582!GO:0051087;chaperone binding;0.00302704391197798!GO:0007265;Ras protein signal transduction;0.00304257291180259!GO:0022403;cell cycle phase;0.00319553020482869!GO:0030658;transport vesicle membrane;0.00323303848138196!GO:0048500;signal recognition particle;0.00323573139572486!GO:0031902;late endosome membrane;0.00326972981038602!GO:0006839;mitochondrial transport;0.00326972981038602!GO:0031968;organelle outer membrane;0.00335938749028518!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00338151216053926!GO:0060090;molecular adaptor activity;0.00340762400162039!GO:0003678;DNA helicase activity;0.00346448758014371!GO:0016741;transferase activity, transferring one-carbon groups;0.00346448758014371!GO:0008168;methyltransferase activity;0.00348395417477862!GO:0043488;regulation of mRNA stability;0.00352491072883622!GO:0043487;regulation of RNA stability;0.00352491072883622!GO:0005741;mitochondrial outer membrane;0.00353893601419788!GO:0006611;protein export from nucleus;0.00365052191051682!GO:0006302;double-strand break repair;0.00407175682931623!GO:0005774;vacuolar membrane;0.0040850556329911!GO:0007067;mitosis;0.00414781941493515!GO:0006338;chromatin remodeling;0.00434276250852538!GO:0003746;translation elongation factor activity;0.00442706992655574!GO:0051920;peroxiredoxin activity;0.00445590248268413!GO:0006405;RNA export from nucleus;0.00459712078853584!GO:0050790;regulation of catalytic activity;0.00478877102321342!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00480211414813279!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00480211414813279!GO:0042110;T cell activation;0.00490107177998147!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00493026579244883!GO:0045047;protein targeting to ER;0.00493026579244883!GO:0005637;nuclear inner membrane;0.00499284728739354!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.005128558189903!GO:0003684;damaged DNA binding;0.00515297089102499!GO:0000049;tRNA binding;0.00534010233097227!GO:0016584;nucleosome positioning;0.00540878835652165!GO:0019783;small conjugating protein-specific protease activity;0.00547295805249273!GO:0004532;exoribonuclease activity;0.00547295805249273!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.00547295805249273!GO:0051789;response to protein stimulus;0.00549563163738152!GO:0006986;response to unfolded protein;0.00549563163738152!GO:0032940;secretion by cell;0.00561637447612053!GO:0048522;positive regulation of cellular process;0.00570617478712384!GO:0008017;microtubule binding;0.00603336675767255!GO:0033116;ER-Golgi intermediate compartment membrane;0.00612809283558885!GO:0004843;ubiquitin-specific protease activity;0.00617126210266249!GO:0006289;nucleotide-excision repair;0.00625344254297745!GO:0004197;cysteine-type endopeptidase activity;0.00625361211736624!GO:0003711;transcription elongation regulator activity;0.00629601306888273!GO:0051540;metal cluster binding;0.00629601306888273!GO:0051536;iron-sulfur cluster binding;0.00629601306888273!GO:0008312;7S RNA binding;0.00639911401328685!GO:0009165;nucleotide biosynthetic process;0.00658764033760047!GO:0006497;protein amino acid lipidation;0.0066295175552994!GO:0009889;regulation of biosynthetic process;0.00692492595347637!GO:0003725;double-stranded RNA binding;0.00725981716216964!GO:0015980;energy derivation by oxidation of organic compounds;0.00726804915165532!GO:0030660;Golgi-associated vesicle membrane;0.00734014061692278!GO:0009116;nucleoside metabolic process;0.0074682949197703!GO:0019843;rRNA binding;0.0075996888997452!GO:0030118;clathrin coat;0.0079650710377669!GO:0051092;activation of NF-kappaB transcription factor;0.00800251603312805!GO:0047485;protein N-terminus binding;0.00802194275241018!GO:0044437;vacuolar part;0.00815430784382346!GO:0006607;NLS-bearing substrate import into nucleus;0.00844469618961866!GO:0015630;microtubule cytoskeleton;0.00861211790501259!GO:0031252;leading edge;0.00864354989100266!GO:0048471;perinuclear region of cytoplasm;0.0087337981168664!GO:0048487;beta-tubulin binding;0.00893867258863393!GO:0003682;chromatin binding;0.00894833016340472!GO:0000209;protein polyubiquitination;0.00903319162308941!GO:0008408;3'-5' exonuclease activity;0.00906389812445998!GO:0051098;regulation of binding;0.00907474616869506!GO:0005669;transcription factor TFIID complex;0.00907474616869506!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.00911704729492434!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00941732246093776!GO:0032259;methylation;0.00991099500875426!GO:0005765;lysosomal membrane;0.0100393106339353!GO:0004221;ubiquitin thiolesterase activity;0.010081664935865!GO:0046966;thyroid hormone receptor binding;0.0101531944736677!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0102439875509598!GO:0006506;GPI anchor biosynthetic process;0.0102439875509598!GO:0045454;cell redox homeostasis;0.0107765737422814!GO:0045045;secretory pathway;0.0110735986099106!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0114307318180868!GO:0016272;prefoldin complex;0.0123436249739037!GO:0006505;GPI anchor metabolic process;0.0132036637137814!GO:0008624;induction of apoptosis by extracellular signals;0.0136037046403574!GO:0044438;microbody part;0.0136037046403574!GO:0044439;peroxisomal part;0.0136037046403574!GO:0005777;peroxisome;0.014514662736709!GO:0042579;microbody;0.014514662736709!GO:0005869;dynactin complex;0.0145778106973804!GO:0008047;enzyme activator activity;0.0145862160418742!GO:0003714;transcription corepressor activity;0.0148107109856477!GO:0042287;MHC protein binding;0.0151829794723895!GO:0006376;mRNA splice site selection;0.0151946412343214!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0151946412343214!GO:0022406;membrane docking;0.0152157897837712!GO:0048278;vesicle docking;0.0152157897837712!GO:0032200;telomere organization and biogenesis;0.0152277077396673!GO:0000723;telomere maintenance;0.0152277077396673!GO:0022411;cellular component disassembly;0.0153068548808438!GO:0008097;5S rRNA binding;0.0153595195567422!GO:0046649;lymphocyte activation;0.0157273432106303!GO:0000178;exosome (RNase complex);0.0157717440713355!GO:0016585;chromatin remodeling complex;0.0158010186993328!GO:0008022;protein C-terminus binding;0.0159535170797511!GO:0005657;replication fork;0.0161631114400956!GO:0031982;vesicle;0.0162469154338138!GO:0030137;COPI-coated vesicle;0.0163122892720471!GO:0006904;vesicle docking during exocytosis;0.0164421003801765!GO:0030663;COPI coated vesicle membrane;0.0164878770136983!GO:0030126;COPI vesicle coat;0.0164878770136983!GO:0043414;biopolymer methylation;0.0167579478435017!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0169422856519497!GO:0010257;NADH dehydrogenase complex assembly;0.0169422856519497!GO:0033108;mitochondrial respiratory chain complex assembly;0.0169422856519497!GO:0031625;ubiquitin protein ligase binding;0.0169773859128162!GO:0050811;GABA receptor binding;0.0170254230394716!GO:0042158;lipoprotein biosynthetic process;0.0180088588146381!GO:0030880;RNA polymerase complex;0.0181082874165841!GO:0031988;membrane-bound vesicle;0.0181193790199756!GO:0030521;androgen receptor signaling pathway;0.0186476635022925!GO:0006091;generation of precursor metabolites and energy;0.0189016351056521!GO:0005048;signal sequence binding;0.0189144263175533!GO:0005083;small GTPase regulator activity;0.0189144263175533!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0190449584318188!GO:0046467;membrane lipid biosynthetic process;0.0195797340685648!GO:0031903;microbody membrane;0.0196475445116817!GO:0005778;peroxisomal membrane;0.0196475445116817!GO:0019058;viral infectious cycle;0.019882972534072!GO:0030695;GTPase regulator activity;0.0199035309902005!GO:0051052;regulation of DNA metabolic process;0.0199587261306445!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0199587261306445!GO:0000738;DNA catabolic process, exonucleolytic;0.020047007977057!GO:0030258;lipid modification;0.0204371489085719!GO:0000287;magnesium ion binding;0.0205112682500431!GO:0051090;regulation of transcription factor activity;0.020515083152611!GO:0016605;PML body;0.0207847526834994!GO:0007050;cell cycle arrest;0.0211646891827585!GO:0009112;nucleobase metabolic process;0.0212252946198444!GO:0007041;lysosomal transport;0.0214542547682397!GO:0005521;lamin binding;0.0215091369611846!GO:0051251;positive regulation of lymphocyte activation;0.0217240680310587!GO:0004576;oligosaccharyl transferase activity;0.0219083105301776!GO:0030125;clathrin vesicle coat;0.0225939553789913!GO:0030665;clathrin coated vesicle membrane;0.0225939553789913!GO:0043281;regulation of caspase activity;0.0231522385414374!GO:0043022;ribosome binding;0.0231530643886159!GO:0043621;protein self-association;0.0244097961684607!GO:0008094;DNA-dependent ATPase activity;0.0244728692622474!GO:0050852;T cell receptor signaling pathway;0.0244876890955945!GO:0040029;regulation of gene expression, epigenetic;0.0244876890955945!GO:0019079;viral genome replication;0.0265381852218648!GO:0051336;regulation of hydrolase activity;0.0270874161207458!GO:0008287;protein serine/threonine phosphatase complex;0.0270874161207458!GO:0006914;autophagy;0.0270874161207458!GO:0031124;mRNA 3'-end processing;0.0278969956754454!GO:0045892;negative regulation of transcription, DNA-dependent;0.0278969956754454!GO:0000776;kinetochore;0.0280080382782894!GO:0001784;phosphotyrosine binding;0.0280411398251642!GO:0000118;histone deacetylase complex;0.0282611120686106!GO:0030867;rough endoplasmic reticulum membrane;0.0282611120686106!GO:0048468;cell development;0.0283664949954489!GO:0005832;chaperonin-containing T-complex;0.0284165763780905!GO:0000059;protein import into nucleus, docking;0.0287454148705767!GO:0004003;ATP-dependent DNA helicase activity;0.029390384414073!GO:0009451;RNA modification;0.0296978861355289!GO:0000175;3'-5'-exoribonuclease activity;0.0300485605050099!GO:0005070;SH3/SH2 adaptor activity;0.0300866867324989!GO:0046822;regulation of nucleocytoplasmic transport;0.0302511249469619!GO:0046979;TAP2 binding;0.0306837385615757!GO:0046977;TAP binding;0.0306837385615757!GO:0046978;TAP1 binding;0.0306837385615757!GO:0008320;protein transmembrane transporter activity;0.0309114561880821!GO:0030518;steroid hormone receptor signaling pathway;0.0313473928744098!GO:0006919;caspase activation;0.0318899342027247!GO:0000279;M phase;0.0318899342027247!GO:0006595;polyamine metabolic process;0.0320682788921895!GO:0000781;chromosome, telomeric region;0.0322385249304217!GO:0008250;oligosaccharyl transferase complex;0.0333551264221082!GO:0030132;clathrin coat of coated pit;0.0335656766796097!GO:0042608;T cell receptor binding;0.0335656766796097!GO:0030119;AP-type membrane coat adaptor complex;0.0335918944525436!GO:0030176;integral to endoplasmic reticulum membrane;0.0338318068779019!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0342325170958089!GO:0004722;protein serine/threonine phosphatase activity;0.0342494236367392!GO:0016790;thiolester hydrolase activity;0.0345169758302907!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0345169758302907!GO:0048518;positive regulation of biological process;0.0346659478562479!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0346659478562479!GO:0000428;DNA-directed RNA polymerase complex;0.0346659478562479!GO:0030127;COPII vesicle coat;0.0347611705942292!GO:0012507;ER to Golgi transport vesicle membrane;0.0347611705942292!GO:0008180;signalosome;0.0350119564258266!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0357731852391546!GO:0031123;RNA 3'-end processing;0.0358002218843176!GO:0016023;cytoplasmic membrane-bound vesicle;0.0360502102237864!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0365557785476744!GO:0006308;DNA catabolic process;0.0370012375457607!GO:0000090;mitotic anaphase;0.0370226122799377!GO:0051322;anaphase;0.0370226122799377!GO:0016763;transferase activity, transferring pentosyl groups;0.0372559692894611!GO:0031410;cytoplasmic vesicle;0.0374187253716556!GO:0009966;regulation of signal transduction;0.038240683784996!GO:0042393;histone binding;0.0386139384106043!GO:0045309;protein phosphorylated amino acid binding;0.0386163218673272!GO:0019883;antigen processing and presentation of endogenous antigen;0.0386416767182643!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0388626046365881!GO:0048002;antigen processing and presentation of peptide antigen;0.0391652252974334!GO:0007004;telomere maintenance via telomerase;0.0393161031226634!GO:0030134;ER to Golgi transport vesicle;0.0401838189887563!GO:0017134;fibroblast growth factor binding;0.0408350863500686!GO:0006284;base-excision repair;0.0410983861515834!GO:0018193;peptidyl-amino acid modification;0.0414131456183267!GO:0006144;purine base metabolic process;0.0420350627796535!GO:0000339;RNA cap binding;0.0420350627796535!GO:0015036;disulfide oxidoreductase activity;0.0420479074150983!GO:0031371;ubiquitin conjugating enzyme complex;0.042438917270323!GO:0005784;translocon complex;0.0425269230970584!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0426895943454079!GO:0022884;macromolecule transmembrane transporter activity;0.0428375822583015!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0428375822583015!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0428724619982031!GO:0007021;tubulin folding;0.0434962463738227!GO:0015923;mannosidase activity;0.0438519629127957!GO:0008538;proteasome activator activity;0.0439049780606983!GO:0030131;clathrin adaptor complex;0.0440015582584326!GO:0030911;TPR domain binding;0.0449110275037859!GO:0002483;antigen processing and presentation of endogenous peptide antigen;0.0451842166908921!GO:0019885;antigen processing and presentation of endogenous peptide antigen via MHC class I;0.0451842166908921!GO:0000123;histone acetyltransferase complex;0.0456632478289649!GO:0005819;spindle;0.046535388698437!GO:0019901;protein kinase binding;0.046535388698437!GO:0051881;regulation of mitochondrial membrane potential;0.0479574485731343!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0480152518132654!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0484334023766457!GO:0000726;non-recombinational repair;0.0488857432874351!GO:0051287;NAD binding;0.0489845347694957!GO:0003950;NAD+ ADP-ribosyltransferase activity;0.0490221101169096!GO:0043280;positive regulation of caspase activity;0.049125751273986!GO:0045321;leukocyte activation;0.0491587769239654!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.0492486946193258!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0494773159124303!GO:0043596;nuclear replication fork;0.0498359976980737!GO:0051219;phosphoprotein binding;0.0499755005093927
|sample_id=12191
|sample_note=
|sample_sex=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=blood
|top_motifs=PAX3,7:2.512881346;PDX1:2.50911569941;ELF1,2,4:2.26687220952;CDX1,2,4:2.18581360338;RUNX1..3:2.07380186422;ETS1,2:1.71303600536;ELK1,4_GABP{A,B1}:1.60030434334;FOX{F1,F2,J1}:1.5788651191;LEF1_TCF7_TCF7L1,2:1.56477228308;FOX{D1,D2}:1.54954586776;FOXO1,3,4:1.43633983519;DMAP1_NCOR{1,2}_SMARC:1.32406946796;PBX1:1.32328666091;FOXA2:1.31299504908;RORA:1.26842075391;CRX:1.19489564924;T:1.18402758081;ZBTB16:1.16136809356;STAT1,3:1.15380399351;SPI1:1.15255587636;PAX6:1.13302507869;NKX2-1,4:1.13046518462;IRF1,2:1.10480963529;BPTF:1.05948628094;GATA6:0.961066062581;TLX2:0.948244865941;YY1:0.911943187233;NKX2-2,8:0.906627054277;RBPJ:0.90286887286;BREu{core}:0.899647457133;SPIB:0.882847576468;IKZF2:0.848668525992;PAX4:0.771424398029;NKX6-1,2:0.72575451896;VSX1,2:0.629049074362;TGIF1:0.605689210626;ZEB1:0.57013985953;ALX1:0.568512972227;SOX5:0.516787238247;HOX{A6,A7,B6,B7}:0.499657688555;NANOG{mouse}:0.492896782262;IRF7:0.485090374999;AR:0.483027481357;POU1F1:0.473509014281;MYOD1:0.416737334188;CUX2:0.395856346483;RXRA_VDR{dimer}:0.39156923112;SOX2:0.387315096512;HMX1:0.367431533919;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.360193889933;SNAI1..3:0.344493961646;FOXN1:0.339401414273;FOX{I1,J2}:0.333953983756;ADNP_IRX_SIX_ZHX:0.318766691361;RFX2..5_RFXANK_RFXAP:0.317789114195;FOXP1:0.314200824344;NR5A1,2:0.312380846112;NRF1:0.303366528894;CREB1:0.270883235434;PRRX1,2:0.263047487536;STAT5{A,B}:0.261727391046;NANOG:0.243609469583;NFKB1_REL_RELA:0.241241684492;ATF5_CREB3:0.225167488957;OCT4_SOX2{dimer}:0.134852092547;NFIX:0.119852536748;SPZ1:0.10481027089;TAL1_TCF{3,4,12}:0.0959357083399;ZNF143:0.0902124644233;LMO2:0.081725466132;ZNF148:0.0687837964088;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.0682083833966;EP300:0.0252612654599;NFIL3:0.00864928114613;MYB:0.00752439797359;POU2F1..3:-0.0277348192273;NFATC1..3:-0.0289119428513;STAT2,4,6:-0.0293059241272;FOXP3:-0.0315189680337;NKX3-1:-0.0351025146679;ZNF384:-0.0505465163286;NR1H4:-0.0516420167006;HMGA1,2:-0.0749243968191;PAX2:-0.101982269451;AHR_ARNT_ARNT2:-0.10570766233;HNF4A_NR2F1,2:-0.157687543467;SREBF1,2:-0.161238097978;FOXQ1:-0.1701145916;ATF2:-0.192093282128;NR3C1:-0.205391963712;HAND1,2:-0.206580962577;ARID5B:-0.220697343657;FOXD3:-0.22204552206;HNF1A:-0.244603293918;HES1:-0.291583426367;TBX4,5:-0.292315178721;E2F1..5:-0.304745112765;ALX4:-0.309538252217;PITX1..3:-0.320135976621;DBP:-0.368456998886;NFY{A,B,C}:-0.376511593795;RFX1:-0.397691107789;EVI1:-0.399171138737;CEBPA,B_DDIT3:-0.414129911363;GFI1:-0.414893091795;NKX2-3_NKX2-5:-0.417405435213;GCM1,2:-0.417482403837;NHLH1,2:-0.425860124859;MTF1:-0.432552141222;FOSL2:-0.450113849324;RREB1:-0.460698181865;HIF1A:-0.461722235163;POU5F1:-0.469315303055;MYFfamily:-0.472557120679;SMAD1..7,9:-0.478555549912;TFAP4:-0.490688697219;ATF6:-0.51631095205;AIRE:-0.529766402722;NFE2L1:-0.533444682499;FOS_FOS{B,L1}_JUN{B,D}:-0.542607721556;BACH2:-0.543450846895;ATF4:-0.550858457339;ZNF423:-0.563986884291;FOXM1:-0.577076201484;MEF2{A,B,C,D}:-0.594520163701;JUN:-0.59988367368;HBP1_HMGB_SSRP1_UBTF:-0.6059469038;MAFB:-0.62113904916;PAX5:-0.628230675302;NFE2L2:-0.646991719521;GLI1..3:-0.653076086334;HOXA9_MEIS1:-0.670877557499;HLF:-0.706987311431;NR6A1:-0.707938358434;ZFP161:-0.727990083716;NFE2:-0.776404627799;EGR1..3:-0.797883439268;TP53:-0.804676441513;HOX{A4,D4}:-0.810720190249;ONECUT1,2:-0.853458682969;SOX{8,9,10}:-0.858350145115;TOPORS:-0.859570691311;PAX8:-0.872985133121;TFCP2:-0.878631230358;ZBTB6:-0.892559320777;ESR1:-0.897518534727;REST:-0.900734105244;EN1,2:-0.912312914765;LHX3,4:-0.914025869806;CDC5L:-0.91786194452;SRF:-0.940024045971;ZNF238:-0.943654394117;PRDM1:-0.951756397144;MZF1:-0.955421998003;MED-1{core}:-0.983556933243;TEF:-0.991573710837;GFI1B:-1.01783586287;HOX{A5,B5}:-1.07071161132;POU6F1:-1.09255428051;PPARG:-1.10274091261;MAZ:-1.13429364771;MTE{core}:-1.13505899548;HSF1,2:-1.19284438522;SOX17:-1.20981727524;EBF1:-1.2113443495;MYBL2:-1.23599033195;UFEwm:-1.23917361412;NKX3-2:-1.25239673679;PATZ1:-1.25293272185;GTF2I:-1.2570344882;TFDP1:-1.26661966335;GZF1:-1.28697552695;FOXL1:-1.31887223218;TFAP2B:-1.3332506465;KLF4:-1.33379424646;XBP1:-1.34101258547;TLX1..3_NFIC{dimer}:-1.36464622027;HIC1:-1.38938328265;ESRRA:-1.42619117622;GATA4:-1.45404860958;RXR{A,B,G}:-1.48203849131;TBP:-1.50619819558;XCPE1{core}:-1.50624277545;ZIC1..3:-1.52496049889;GTF2A1,2:-1.55190106719;TEAD1:-1.58681424428;POU3F1..4:-1.61604143694;bHLH_family:-1.81569654838;TFAP2{A,C}:-1.89830824239;SP1:-1.91959829257;IKZF1:-2.27538535288;PAX1,9:-2.47728203138
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:12191-129B4;search_select_hide=table117:FF:12191-129B4
}}
}}

Latest revision as of 18:33, 4 June 2020

Name:CD8+ T Cells (pluriselect), donor090309, donation2
Species:Human (Homo sapiens)
Library ID:CNhs12178,RDhi10015
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueblood
dev stageNA
sexNA
ageNA
cell typeT cell, CD8+
cell lineNA
companyNA
collaborationMatched_genome_OSC(contact:Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typeNA
extraction protocol (Details)NA

CAGE Accession numbers
MethodSample accession id
RNA-Seq  SAMD00013691
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12178 CAGE DRX008065 DRR008937
RDhi10015 RNA-Seq DRX012348 DRR013796
Accession ID Hg19

Library idBAMCTSS
CNhs12178 DRZ000362 DRZ001747
RDhi10015 DRZ002997
Accession ID Hg38

Library idBAMCTSS
CNhs12178 DRZ011712 DRZ013097
RDhi10015
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0.218
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.168
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.245
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.37
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.297
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0.836
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.465
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.323
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.406
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140.218
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0.362
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.00458
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.555
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0.155
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.305
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.225
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0.629
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40.00355
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.627
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0.13
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0.171
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0.218
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.958
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0.876
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12178

Jaspar motifP-value
MA0002.25.47488e-9
MA0003.10.829
MA0004.10.769
MA0006.10.36
MA0007.10.914
MA0009.10.296
MA0014.10.984
MA0017.10.05
MA0018.20.383
MA0019.10.998
MA0024.10.253
MA0025.10.249
MA0027.10.966
MA0028.12.47524e-5
MA0029.10.795
MA0030.10.261
MA0031.10.011
MA0035.20.0819
MA0038.10.0264
MA0039.20.757
MA0040.10.889
MA0041.10.651
MA0042.10.966
MA0043.10.0248
MA0046.10.947
MA0047.20.0525
MA0048.10.416
MA0050.19.70763e-6
MA0051.10.016
MA0052.10.00237
MA0055.10.921
MA0057.10.948
MA0058.10.793
MA0059.10.298
MA0060.10.0516
MA0061.10.00831
MA0062.22.41851e-16
MA0065.20.0148
MA0066.10.0996
MA0067.10.463
MA0068.10.874
MA0069.10.997
MA0070.10.494
MA0071.10.383
MA0072.10.346
MA0073.10.901
MA0074.10.635
MA0076.12.21013e-8
MA0077.10.238
MA0078.10.493
MA0079.20.38
MA0080.21.64526e-12
MA0081.10.019
MA0083.10.00725
MA0084.10.487
MA0087.10.86
MA0088.10.0593
MA0090.17.13086e-4
MA0091.10.889
MA0092.10.846
MA0093.10.894
MA0099.20.0286
MA0100.10.401
MA0101.10.871
MA0102.20.581
MA0103.10.0799
MA0104.20.0765
MA0105.15.25427e-6
MA0106.10.571
MA0107.10.908
MA0108.21.72104e-12
MA0111.10.195
MA0112.20.0921
MA0113.10.342
MA0114.10.123
MA0115.10.649
MA0116.12.27644e-5
MA0117.10.796
MA0119.10.938
MA0122.10.26
MA0124.10.596
MA0125.10.54
MA0131.10.405
MA0135.10.38
MA0136.11.4093e-23
MA0137.20.0445
MA0138.20.987
MA0139.10.0019
MA0140.10.12
MA0141.10.659
MA0142.10.437
MA0143.10.302
MA0144.10.262
MA0145.10.729
MA0146.10.419
MA0147.10.084
MA0148.10.113
MA0149.10.107
MA0150.10.314
MA0152.10.0579
MA0153.10.34
MA0154.10.00434
MA0155.10.904
MA0156.11.51027e-20
MA0157.10.00447
MA0159.10.045
MA0160.10.323
MA0162.10.835
MA0163.12.89845e-12
MA0164.10.613
MA0258.10.124
MA0259.10.258



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12178

Novel motifP-value
10.201
100.0147
1000.982
1010.158
1020.542
1030.256
1040.441
1050.0916
1060.843
1070.265
1080.858
1090.0379
110.056
1100.424
1110.304
1120.374
1130.298
1140.193
1150.183
1160.953
1170.00554
1180.385
1190.578
120.738
1200.55
1210.969
1220.429
1230.0244
1240.0224
1250.625
1260.364
1270.654
1280.796
1290.139
130.501
1301
1310.821
1320.961
1330.979
1340.954
1350.358
1360.739
1370.268
1380.378
1390.0153
140.363
1400.103
1410.587
1420.314
1432.67382e-5
1440.674
1450.241
1460.12
1470.0327
1480.12
1490.994
150.0508
1500.539
1510.319
1520.238
1530.547
1540.96
1550.0145
1560.323
1570.574
1580.157
1590.208
160.628
1600.61
1610.229
1620.527
1630.607
1640.432
1650.639
1660.56
1670.183
1680.121
1690.672
170.848
180.618
190.551
20.668
200.921
210.425
220.891
230.84
240.789
250.0625
260.398
270.058
280.524
290.0478
30.0461
300.488
310.733
320.334
330.575
340.88
350.0663
360.0255
370.148
380.48
390.623
40.563
400.58
410.168
420.042
430.188
440.66
450.835
460.129
470.0526
480.126
490.0958
50.0999
500.513
510.434
520.28
530.183
540.395
550.293
560.501
570.342
580.0452
590.388
60.92
600.455
610.101
620.0212
630.605
640.178
650.623
660.891
670.956
680.664
690.871
70.149
700.00472
710.0974
720.0587
730.687
740.374
750.0246
760.342
770.604
780.11
790.273
80.649
800.00357
810.274
820.095
830.955
840.585
850.855
860.208
870.714
880.83
890.943
90.559
900.0089
910.865
920.268
930.277
940.0472
950.0171
960.0867
970.386
980.13
990.161



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12178


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000542 (lymphocyte)
0000219 (motile cell)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0002242 (nucleate cell)
0000255 (eukaryotic cell)
0000791 (mature alpha-beta T cell)
0000084 (T cell)
0000789 (alpha-beta T cell)
0002419 (mature T cell)
0000625 (CD8-positive, alpha-beta T cell)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000030 (CD8-positive T cell sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
CL:0000051 (common lymphoid progenitor)
CL:0000790 (immature alpha-beta T cell)

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