FF:10050-101G5: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{f5samples
|id=FF:10050-101G5
|name=heart, adult, donor1, tech_rep1 (9070074A)
|sample_id=10050
|rna_tube_id=101G5
|rna_box=101
|rna_position=G5
|sample_cell_lot=NA
|...") |
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{{f5samples | {{f5samples | ||
| | |DRA_sample_Accession=CAGE@SAMD00005847 | ||
|accession_numbers=CAGE;DRX008663;DRR009535;DRZ000960;DRZ002345;DRZ012310;DRZ013695 | |||
| | |ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0007100,UBERON:0000479,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003103,UBERON:0001009 | ||
| | |||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
| | |ancestors_in_disease_facet=DOID:4,DOID:1287,DOID:7,DOID:178,DOID:326,DOID:3978,DOID:114,DOID:3394,DOID:5844 | ||
| | |ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0010016 | ||
| | |comment=Previously: heart, adult, donor1, rep1 (9070074A) | ||
|created_by= | |||
|creation_date= | |||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |||
|expression_enrichment_score=chr5:172662197..172662216,-!p1@NKX2-5!2.47!297.12!NKX2-5;;chr12:52437488..52437507,+!p2@NR4A1!2.17!145.57!NR4A1;;chr4:174451370..174451387,-!p1@HAND2!1.93!83.67!HAND2;;chr7:35293685..35293718,-!p1@TBX20!1.90!79.07!TBX20;;chr19:46801639..46801699,+!p1@HIF3A!1.87!72.68!HIF3A;;chr20:62680984..62680999,-!p1@SOX18!1.80!81.27!SOX18;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.77!57.31!ZBED1;;chr8:11561684..11561751,+!p1@GATA4!1.74!54.51!GATA4;;chr1:40105299..40105326,-!p1@HEYL!1.70!48.92!HEYL;;chr1:201979743..201979762,+!p1@ELF3!1.67!45.73!ELF3;;chr5:172662303..172662320,-!p2@NKX2-5!1.66!44.93!NKX2-5;;chr14:105935396..105935413,+!p4@MTA1!1.57!36.14!MTA1;;chr20:55204351..55204377,+!p1@TFAP2C!1.55!43.93!TFAP2C;;chr1:201979703..201979721,+!p2@ELF3!1.55!34.74!ELF3;;chr15:42749722..42749739,-!p2@ZFP106!1.52!56.11!ZFP106;;chr11:113930425..113930471,+!p1@ZBTB16!1.48!41.53!ZBTB16;;chr4:174451350..174451363,-!p3@HAND2!1.42!25.36!HAND2;;chr16:54320617..54320643,-!p3@IRX3!1.41!31.55!IRX3;;chr18:19749541..19749557,+!p1@GATA6!1.38!70.09!GATA6;;chr8:10588010..10588030,-!p1@SOX7!1.38!22.76!SOX7;;chr18:19749386..19749404,+!p2@GATA6!1.36!31.35!GATA6;;chr17:26697276..26697303,-!p2@SEBOX,p2@VTN!1.36!21.77!SEBOX;;chr3:181429704..181429722,+!p1@SOX2!1.35!21.37!SOX2;;chr14:38064429..38064486,-!p1@FOXA1!1.35!21.17!FOXA1;;chr8:102504979..102505010,+!p2@GRHL2!1.33!20.57!GRHL2;;chr8:102504651..102504683,+!p1@GRHL2!1.33!20.17!GRHL2;;chr6:126070769..126070801,+!p1@HEY2!1.32!22.96!HEY2;;chr15:96869511..96869525,+!p16@NR2F2!1.30!21.17!NR2F2;;chr4:174450089..174450153,-!p2@HAND2!1.29!18.37!HAND2;;chr4:57547454..57547469,-!p1@HOPX!1.26!17.37!HOPX;;chr19:33793430..33793447,-!p1@CEBPA!1.25!70.09!CEBPA;;chr6:10415484..10415508,-!p3@TFAP2A!1.24!16.57!TFAP2A;;chr1:214161272..214161322,+!p1@PROX1!1.20!20.77!PROX1;;chr6:134210243..134210257,+!p1@TCF21!1.20!14.78!TCF21;;chr5:172662230..172662241,-!p3@NKX2-5!1.19!14.38!NKX2-5;;chr1:6479968..6479986,-!p1@HES2!1.18!13.98!HES2;;chr3:193853927..193853944,+!p1@HES1!1.16!433.10!HES1;;chr3:181429741..181429767,+!p2@SOX2!1.16!13.38!SOX2;;chr5:2751762..2751784,-!p1@IRX2!1.16!13.38!IRX2;;chr19:47523058..47523114,+!p1@NPAS1!1.15!12.98!NPAS1;;chr14:73360799..73360817,-!p1@DPF3!1.13!43.33!DPF3;;chr21:39870339..39870443,-!p1@ERG!1.13!12.58!ERG;;chr19:45908292..45908374,-!p1@PPP1R13L!1.11!104.23!PPP1R13L;;chr11:46337652..46337682,+!p16@CREB3L1!1.11!11.78!CREB3L1;;chr8:99956662..99956684,+!p1@OSR2!1.10!17.97!OSR2;;chr16:54320646..54320672,-!p2@IRX3!1.10!17.77!IRX3;;chr1:2985760..2985774,+!p1@PRDM16!1.09!11.38!PRDM16;;chr13:73633131..73633149,+!p1@KLF5!1.08!118.21!KLF5;;chr8:55370487..55370503,+!p1@SOX17!1.07!10.78!SOX17;;chr6:10419768..10419819,-!p6@TFAP2A!1.06!10.58!TFAP2A;;chr14:105935426..105935440,+!p9@MTA1!1.06!10.58!MTA1;;chr19:22193731..22193751,-!p1@ZNF208!1.03!9.78!ZNF208;;chr6:19837592..19837621,+!p1@ID4!1.02!58.31!ID4;;chr17:53342311..53342400,+!p1@HLF!1.02!10.98!HLF;;chr17:26697304..26697335,-!p1@SEBOX,p1@VTN!1.02!9.58!SEBOX;;chr18:19749517..19749531,+!p3@GATA6!1.00!16.17!GATA6;;chr10:8096631..8096660,+!p1@GATA3!1.00!10.98!GATA3;;chr8:25902876..25902936,-!p1@EBF2!1.00!8.99!EBF2;;chr2:242556880..242556899,-!p5@THAP4!0.99!8.79!THAP4;;chr11:113930401..113930422,+!p3@ZBTB16!0.99!8.79!ZBTB16;;chr17:45928521..45928539,-!p1@SP6!0.98!8.59!SP6;;chr3:126076242..126076257,-!p1@KLF15!0.97!10.58!KLF15;;chr11:47400078..47400106,-!p1@SPI1!0.97!8.39!SPI1;;chr16:54320101..54320125,-!p4@IRX3!0.96!11.58!IRX3;;chr5:153857778..153857794,-!p1@HAND1!0.96!8.19!HAND1;;chr19:45971246..45971265,+!p1@FOSB!0.95!153.95!FOSB;;chr12:52445218..52445237,+!p1@NR4A1!0.95!103.83!NR4A1;;chr8:106330656..106330684,+!p1@ZFPM2!0.95!21.37!ZFPM2;;chr20:590944..590960,-!p1@TCF15!0.95!7.99!TCF15;;chr17:46126136..46126152,+!p1@NFE2L1!0.93!396.76!NFE2L1;;chr20:31350184..31350200,+!p1@DNMT3B!0.93!15.97!DNMT3B;;chr1:209979467..209979494,-!p1@IRF6!0.93!8.39!IRF6;;chr17:41739283..41739297,-!p1@MEOX1!0.93!7.59!MEOX1;;chr5:71803177..71803255,-!p1@ZNF366!0.93!7.59!ZNF366;;chr7:96654133..96654150,-!p1@DLX5!0.91!7.19!DLX5;;chr1:10856639..10856662,-!p2@CASZ1!0.90!6.99!CASZ1;;chr11:65554563..65554576,+!p2@OVOL1!0.90!6.99!OVOL1;;chr1:8483756..8483809,-!p5@RERE!0.89!19.77!RERE;;chr1:40367530..40367597,-!p1@MYCL1!0.89!12.78!MYCL1;;chr2:68592406..68592424,+!p1@PLEK!0.89!6.79!PLEK;;chr16:54964740..54964789,+!p1@IRX5!0.87!9.38!IRX5;;chr16:54319010..54319041,-!p8@IRX3!0.87!6.39!IRX3;;chr11:65554528..65554546,+!p1@OVOL1!0.87!6.39!OVOL1;;chr16:54320675..54320715,-!p1@IRX3!0.86!13.98!IRX3;;chr6:10412600..10412637,-!p1@TFAP2A!0.86!10.78!TFAP2A;;chr1:10754477..10754517,-!p1@CASZ1!0.86!10.58!CASZ1;;chr1:216896752..216896778,-!p1@ESRRG!0.86!6.19!ESRRG;;chr1:8483723..8483752,-!p12@RERE!0.84!9.58!RERE;;chr13:73636252..73636307,+!p2@KLF5!0.84!6.99!KLF5;;chr14:105935576..105935594,+!p11@MTA1!0.84!5.99!MTA1;;chr1:151804244..151804310,-!p1@RORC!0.84!5.99!RORC;;chr1:40367668..40367684,-!p2@MYCL1!0.84!5.99!MYCL1;;chr8:102504690..102504704,+!p3@GRHL2!0.84!5.9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21!0.25!0.80!SOX21;;chr14:69260437..69260442,-!p10@ZFP36L1!0.25!0.80!ZFP36L1;;chr14:74256787..74256858,-!p6@C14orf43!0.25!0.80!C14orf43;;chr22:24093154..24093183,-!p2@ZNF70!0.25!0.80!ZNF70;;chr2:177001237..177001252,+!p5@HOXD3!0.25!0.80!HOXD3;;chr2:238592039..238592054,+!p4@LRRFIP1!0.25!0.80!LRRFIP1;;chr2:46612891..46612907,+!p10@EPAS1!0.25!0.80!EPAS1;;chr2:63277978..63277995,+!p2@OTX1!0.25!0.80!OTX1;;chr2:96012353..96012378,+!p4@KCNIP3!0.25!0.80!KCNIP3;;chr3:168864383..168864400,-!p7@MECOM!0.25!0.80!MECOM;;chr3:21792790..21792824,-!p4@ZNF385D!0.25!0.80!ZNF385D;;chr4:57522598..57522664,-!p3@HOPX!0.25!0.80!HOPX;;chr5:3595934..3595957,+!p2@IRX1!0.25!0.80!IRX1;;chr6:1612200..1612213,+!p9@FOXC1!0.25!0.80!FOXC1;;chr6:32158046..32158055,-!p4@PBX2!0.25!0.80!PBX2;;chr7:100065686..100065701,-!p2@TSC22D4!0.25!0.80!TSC22D4;;chr7:139762578..139762589,-!p2@PARP12!0.25!0.80!PARP12;;chr7:149471046..149471070,-!p4@ZNF467!0.25!0.80!ZNF467;;chr7:27170359..27170381,-!p1@HOXA4!0.25!0.80!HOXA4;;chr7:27196196..27196210,-!p5@HOXA7!0.25!0.80!HOXA7;;chr8:106330515..106330525,+!p6@ZFPM2!0.25!0.80!ZFPM2;;chr8:80680061..80680075,-!p4@HEY1!0.25!0.80!HEY1;;chr9:124976154..124976177,-!p5@LHX6!0.25!0.80!LHX6;;chrX:131545395..131545413,-!p16@MBNL3!0.25!0.80!MBNL3;;chr9:73029044..73029056,-!p10@KLF9!0.25!0.80!KLF9;;chr9:127358120..127358170,-!p3@NR6A1!0.25!0.80!NR6A1;;chrX:131545273..131545287,-!p17@MBNL3!0.25!0.80!MBNL3;;chr19:45977697..45977713,+!p4@FOSB!0.25!0.80!FOSB;;chr19:46806868..46806883,+!p3@HIF3A!0.25!0.80!HIF3A;;chr1:164528276..164528286,+!p14@PBX1!0.25!0.80!PBX1;;chr1:170633058..170633084,+!p5@PRRX1!0.25!0.80!PRRX1;;chr1:217263244..217263270,-!p12@ESRRG!0.25!0.80!ESRRG;;chr1:2985566..2985608,+!p3@PRDM16!0.25!0.80!PRDM16;;chr1:3568870..3568881,+!p5@TP73!0.25!0.80!TP73;;chr1:3569135..3569150,+!p3@TP73!0.25!0.80!TP73;;chr1:8483692..8483703,-!p26@RERE!0.25!0.80!RERE;;chr1:8586084..8586100,-!p20@RERE!0.25!0.80!RERE;;chr20:18038486..18038520,-!p2@OVOL2!0.25!0.80!OVOL2;;chr20:2673369..2673382,+!p2@EBF4!0.25!0.80!EBF4;;chr20:61051039..61051057,-!p1@GATA5!0.25!0.80!GATA5;;chr14:75747296..75747329,+!p4@FOS!0.25!0.80!FOS;;chr15:90294087..90294115,-!p1@MESP1!0.25!0.80!MESP1;;chr16:30406101..30406114,+!p6@ZNF48!0.25!0.80!ZNF48;;chr16:54964690..54964703,+!p4@IRX5!0.25!0.80!IRX5;;chr16:73082542..73082574,-!p11@ZFHX3!0.25!0.80!ZFHX3;;chr16:86600870..86600921,+!p2@FOXC2!0.25!0.80!FOXC2;;chr18:45663438..45663456,-!p3@ZBTB7C!0.25!0.80!ZBTB7C;;chr19:3574330..3574393,+!p2@HMG20B!0.25!0.80!HMG20B;;chr19:35760698..35760738,+!p8@USF2!0.25!0.80!USF2;;chr19:33864600..33864732,+!p1@CEBPG!0.24!43.33!CEBPG;;chr4:467892..467963,-!p1@ABCA11P,p1@ZNF721!0.24!39.54!ZNF721;;chr7:44143925..44143970,+!p1@AEBP1!0.24!34.74!AEBP1;;chr2:242576460..242576600,-!p1@THAP4!0.24!23.16!THAP4;;chr19:57791328..57791377,+!p2@ZNF460!0.24!18.57!ZNF460;;chr19:57702846..57702891,+!p1@ZNF264!0.24!15.38!ZNF264;;chr7:77428149..77428220,+!p1@PHTF2!0.24!15.38!PHTF2;;chr7:28220198..28220269,-!p2@JAZF1!0.24!13.38!JAZF1;;chr20:3388238..3388323,-!p1@C20orf194!0.24!10.58!C20orf194;;chr17:4981745..4981810,+!p1@ZFP3!0.24!6.99!ZFP3;;chr19:38210622..38210681,-!p1@ZNF607!0.24!5.19!ZNF607;;chr2:25564750..25564807,-!p1@DNMT3A!0.24!5.19!DNMT3A;;chr5:34929947..34930005,+!p3@DNAJC21!0.24!3.79!DNAJC21;;chr19:58446721..58446779,-!p1@ZNF418!0.24!3.59!ZNF418;;chr2:46524474..46524491,+!p4@EPAS1!0.24!3.00!EPAS1;;chr11:47279504..47279563,+!p1@NR1H3!0.24!2.80!NR1H3;;chr16:8962544..8962584,-!p2@CARHSP1!0.24!2.80!CARHSP1;;chr3:23986748..23986761,+!p3@NR1D2!0.24!2.60!NR1D2;;chr9:102584128..102584144,+!p3@NR4A3!0.24!2.20!NR4A3;;chr2:214015111..214015179,-!p1@IKZF2!0.24!2.00!IKZF2;;chr9:14314106..14314119,-!p5@NFIB!0.24!2.00!NFIB;;chr9:137218262..137218273,+!p5@RXRA!0.24!1.80!RXRA;;chr17:15689487..15689505,+!p@chr17:15689487..15689505,+!0.24!1.80!MEIS3P1;;chr3:168864315..168864339,-!p2@MECOM!0.24!1.80!MECOM;;chr15:64752927..64752950,+!p3@ZNF609!0.24!1.60!ZNF609;;chr12:26277929..26277955,-!p3@BHLHE41!0.24!1.40!BHLHE41;;chr14:62213827..62213853,+!p6@HIF1A!0.24!1.40!HIF1A;;chr11:707063..707088,-!p4@DEAF1!0.24!1.20!DEAF1;;chr1:221052733..221052749,+!p2@HLX!0.24!1.20!HLX;;chr9:2029144..2029164,+!p10@SMARCA2!0.24!1.20!SMARCA2;;chr5:139494672..139494695,+!p8@PURA!0.24!1.20!PURA;;chr6:41514178..41514192,+!p4@FOXP4!0.24!1.00!FOXP4;;chr19:58666502..58666519,-!p4@ZNF329!0.24!1.00!ZNF329;;chr20:33330556..33330569,-!p6@NCOA6!0.24!1.00!NCOA6;;chr10:31607702..31607755,+!p3@ZEB1!0.24!1.00!ZEB1;;chr10:44144240..44144252,-!p4@ZNF32!0.24!1.00!ZNF32;;chr12:53845879..53845894,+!p1@PCBP2!0.23!1088.25!PCBP2;;chr19:50879705..50879775,+!p1@NR1H2!0.23!71.68!NR1H2;;chr15:100106155..100106243,+!p1@MEF2A!0.23!40.53!MEF2A;;chr5:16465902..16465917,-!p1@ZNF622!0.23!36.54!ZNF622;;chr1:41157363..41157416,+!p1@NFYC!0.23!28.75!NFYC;;chr19:58609577..58609628,-!p1@ZSCAN18!0.23!18.57!ZSCAN18;;chr20:33413416..33413466,-!p1@NCOA6!0.23!17.57!NCOA6;;chr5:132299210..132299228,-!p3@AFF4!0.23!17.37!AFF4;;chr3:141868293..141868355,-!p2@TFDP2!0.23!12.78!TFDP2;;chr19:58790314..58790358,+!p1@ZNF8!0.23!11.18!ZNF8;;chr16:1662351..1662442,+!p1@CRAMP1L!0.23!10.58!CRAMP1L;;chr14:74318611..74318682,+!p1@PTGR2,p2@ZNF410!0.23!9.98!ZNF410;;chr12:48744642..48744733,-!p1@ZNF641!0.23!9.78!ZNF641;;chr12:124873852..124873881,-!p3@NCOR2!0.23!8.59!NCOR2;;chr2:145275162..145275202,-!p2@ZEB2!0.23!8.39!ZEB2;;chr19:49140609..49140643,-!p1@DBP!0.23!7.99!DBP;;chr15:60884706..60884743,-!p1@RORA!0.23!7.19!RORA;;chr13:74708504..74708549,-!p1@KLF12!0.23!6.19!KLF12;;chr12:54019757..54019804,-!p2@ATF7!0.23!5.19!ATF7;;chr19:54041382..54041437,+!p3@ZNF331!0.23!3.59!ZNF331;;chr15:74833584..74833626,+!p1@ARID3B!0.23!2.80!ARID3B;;chr20:48807171..48807234,+!p4@CEBPB!0.23!2.60!CEBPB;;chr2:75937794..75937867,-!p2@GCFC2!0.23!2.60!GCFC2;;chr1:42501569..42501614,-!p1@HIVEP3!0.23!2.40!HIVEP3;;chr20:42143077..42143126,+!p1@L3MBTL1!0.23!2.40!L3MBTL;;chr4:38665703..38665713,+!p5@KLF3!0.23!2.20!KLF3;;chr12:10875351..10875422,-!p4@CSDA!0.23!2.20!CSDA;;chr12:53614155..53614187,-!p3@RARG!0.23!2.20!RARG;;chr14:103059006..103059017,+!p2@RCOR1!0.23!1.60!RCOR1;;chr19:56671612..56671626,+!p4@ZNF444!0.23!1.60!ZNF444;;chr15:96869292..96869320,+!p15@NR2F2!0.23!1.40!NR2F2;;chr8:60031762..60031803,-!p3@TOX!0.23!1.40!TOX;;chr6:43139126..43139137,+!p6@SRF!0.23!1.20!SRF;;chr20:48809000..48809053,+!p12@CEBPB!0.23!1.20!CEBPB;;chr12:6782441..6782459,-!p8@ZNF384!0.23!1.20!ZNF384;;chr9:132427972..132428056,+!p1@PRRX2!0.23!1.20!PRRX2;;chr1:114258267..114258270,-!p5@PHTF1!0.23!1.00!PHTF1;;chr11:19263160..19263176,-!p1@E2F8!0.23!1.00!E2F8;;chr15:37392593..37392607,-!p13@MEIS2!0.23!1.00!MEIS2;;chr17:38498510..38498540,+!p7@RARA!0.23!1.00!RARA;;chr6:35465058..35465077,-!p2@TEAD3!0.23!0.80!TEAD3;;chr12:57916434..57916445,+!p11@MBD6!0.23!0.80!MBD6;;chr5:137801160..137801176,+!p1@EGR1!0.22!149.36!EGR1;;chr3:37217756..37217844,-!p1@LRRFIP2!0.22!95.25!LRRFIP2;;chr1:6845497..6845561,+!p1@CAMTA1!0.22!55.51!CAMTA1;;chr16:30798492..30798535,-!p1@ZNF629!0.22!23.36!ZNF629;;chr19:59031131..59031193,-!p1@ZBTB45!0.22!19.17!ZBTB45;;chr3:179040767..179040866,+!p1@ZNF639!0.22!14.98!ZNF639;;chr17:80477643..80477678,+!p2@FOXK2!0.22!8.79!FOXK2;;chr16:30583017..30583064,-!p1@ZNF688!0.22!6.99!ZNF688;;chr21:47063625..47063658,+!p1@PCBP3!0.22!5.79!PCBP3;;chr19:53445819..53445860,-!p2@ZNF321P,p2@ZNF816-ZNF321P,p2@ZNF816!0.22!3.79!ZNF321P;;chr19:9879350..9879419,-!p2@ZNF846!0.22!2.40!ZNF846;;chr1:154975110..154975149,+!p2@ZBTB7B!0.22!2.40!ZBTB7B;;chr19:36980455..36980469,-!p2@ZNF566!0.22!2.40!ZNF566;;chr4:38665659..38665670,+!p6@KLF3!0.22!1.80!KLF3;;chr5:88179195..88179224,-!p3@MEF2C!0.22!1.60!MEF2C;;chr2:166326200..166326216,+!p1@CSRNP3!0.22!1.40!CSRNP3;;chr12:56401175..56401225,+!p3@IKZF4!0.22!1.40!IKZF4;;chr16:67881588..67881612,-!p2@CENPT!0.22!1.20!CENPT;;chr15:37392576..37392589,-!p12@MEIS2!0.22!1.00!MEIS2;;chr1:6684918..6684936,+!p2@THAP3!0.22!1.00!THAP3;;chr11:130184828..130184839,-!p7@ZBTB44!0.22!1.00!ZBTB44;;chr17:42295955..42295964,-!p22@UBTF!0.22!0.80!UBTF;;chr2:24930425..24930435,+!p4@NCOA1!0.22!0.80!NCOA1;;chr2:25565377..25565389,-!p9@DNMT3A!0.22!0.80!DNMT3A;;chr22:29196547..29196563,-!p2@XBP1!0.21!53.91!XBP1;;chr7:137686791..137686821,-!p1@CREB3L2!0.21!41.93!CREB3L2;;chr20:44718538..44718612,-!p1@NCOA5!0.21!39.94!NCOA5;; | |||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0007100 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
Line 67: | Line 40: | ||
|fonse_treatment= | |fonse_treatment= | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/heart%252c%2520adult%252c%2520diseased%2520post-infarction%252c%2520donor1.CNhs11757.10050-101G5.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/heart%252c%2520adult%252c%2520diseased%2520post-infarction%252c%2520donor1.CNhs11757.10050-101G5.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/heart%252c%2520adult%252c%2520diseased%2520post-infarction%252c%2520donor1.CNhs11757.10050-101G5.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/heart%252c%2520adult%252c%2520diseased%2520post-infarction%252c%2520donor1.CNhs11757.10050-101G5.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/heart%252c%2520adult%252c%2520diseased%2520post-infarction%252c%2520donor1.CNhs11757.10050-101G5.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10050-101G5 | |||
|is_a=DOID:5844;;FF:0010016 | |||
|is_obsolete= | |||
|library_id=CNhs11757 | |||
|library_id_phase_based=2:CNhs11757 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10050 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10050 | |||
|name=heart, adult, diseased post-infarction, donor1 | |||
|namespace=FANTOM5 | |||
|part_of= | |||
|profile_cagescan=,,, | |||
|profile_hcage=CNhs11757,LSID820,release009,COMPLETED | |||
|profile_rnaseq= | |||
|profile_srnaseq=,,, | |||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=101 | |||
|rna_catalog_number=Cat:636582 | |||
|rna_concentration=1 | |||
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0 | |||
|rna_lot_number=9070074A | |||
|rna_od260/230= | |||
|rna_od260/280= | |||
|rna_position=G5 | |||
|rna_rin= | |||
|rna_sample_type=total RNA | |||
|rna_tube_id=101G5 | |||
|rna_weight_ug=50 | |||
|sample_age= | |||
|sample_category=tissues | |||
|sample_cell_catalog=NA | |||
|sample_cell_line= | |||
|sample_cell_lot=NA | |||
|sample_cell_type=CELL MIXTURE - tissue sample | |||
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest) | |||
|sample_company=Clontech | |||
|sample_description= | |||
|sample_dev_stage=92 years old adult | |||
|sample_disease=normal | |||
|sample_donor(cell lot)=1 | |||
|sample_ethnicity=C | |||
|sample_experimental_condition= | |||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0005737;cytoplasm;8.67102085884254e-228!GO:0044424;intracellular part;4.47355959344276e-224!GO:0043226;organelle;3.00990348942609e-172!GO:0043229;intracellular organelle;6.5178432790549e-172!GO:0044444;cytoplasmic part;4.3273373814774e-163!GO:0043231;intracellular membrane-bound organelle;1.1458508727959e-153!GO:0043227;membrane-bound organelle;1.52224686577167e-153!GO:0044422;organelle part;8.44890359024435e-134!GO:0044446;intracellular organelle part;2.61252052646198e-132!GO:0005515;protein binding;1.37548442073094e-94!GO:0032991;macromolecular complex;2.66542883019825e-90!GO:0005739;mitochondrion;4.09253301055017e-78!GO:0044238;primary metabolic process;4.20337780352022e-62!GO:0030529;ribonucleoprotein complex;4.93687786752366e-62!GO:0044237;cellular metabolic process;9.71294133094177e-60!GO:0031090;organelle membrane;7.59336971106336e-57!GO:0043233;organelle lumen;1.87788058430655e-56!GO:0031974;membrane-enclosed lumen;1.87788058430655e-56!GO:0044429;mitochondrial part;5.42349631822124e-56!GO:0043170;macromolecule metabolic process;4.22618439341375e-51!GO:0043234;protein complex;9.28143511008116e-51!GO:0016043;cellular component organization and biogenesis;8.67159796954108e-49!GO:0031967;organelle envelope;2.77784194836275e-48!GO:0031975;envelope;4.45907584354106e-48!GO:0019538;protein metabolic process;2.57978275392848e-47!GO:0044428;nuclear part;6.93967925910087e-47!GO:0003723;RNA binding;9.35250201455004e-47!GO:0044260;cellular macromolecule metabolic process;1.02424282843308e-41!GO:0005840;ribosome;1.82387052692306e-41!GO:0005634;nucleus;9.47156244786965e-41!GO:0044267;cellular protein metabolic process;5.32225609088294e-40!GO:0006412;translation;3.7683679716765e-39!GO:0005740;mitochondrial envelope;1.86827394891642e-37!GO:0015031;protein transport;1.01752980513012e-36!GO:0033036;macromolecule localization;1.29127385027363e-36!GO:0043228;non-membrane-bound organelle;1.72377212530694e-36!GO:0043232;intracellular non-membrane-bound organelle;1.72377212530694e-36!GO:0009058;biosynthetic process;4.19236540210785e-36!GO:0031966;mitochondrial membrane;4.95304083920047e-36!GO:0003735;structural constituent of ribosome;1.28917305065131e-35!GO:0019866;organelle inner membrane;8.19939902934283e-35!GO:0008104;protein localization;4.92377179945196e-34!GO:0045184;establishment of protein localization;1.86365521265206e-33!GO:0044249;cellular biosynthetic process;3.25217661034249e-33!GO:0005743;mitochondrial inner membrane;6.5368224598441e-33!GO:0005829;cytosol;1.0480350640613e-32!GO:0046907;intracellular transport;1.49203236421452e-32!GO:0009059;macromolecule biosynthetic process;3.78930113293888e-32!GO:0033279;ribosomal subunit;3.39923851788057e-31!GO:0006996;organelle organization and biogenesis;1.93528104577226e-29!GO:0006396;RNA processing;1.10905611618979e-28!GO:0065003;macromolecular complex assembly;3.33685090141863e-28!GO:0016071;mRNA metabolic process;4.66821691491842e-28!GO:0022607;cellular component assembly;1.06917406051339e-27!GO:0031981;nuclear lumen;3.74099560721811e-26!GO:0006886;intracellular protein transport;4.78101238926645e-26!GO:0008380;RNA splicing;5.20409534921779e-26!GO:0006119;oxidative phosphorylation;6.19642780423514e-25!GO:0044455;mitochondrial membrane part;5.2231034881668e-24!GO:0031980;mitochondrial lumen;1.68992686018836e-23!GO:0005759;mitochondrial matrix;1.68992686018836e-23!GO:0006397;mRNA processing;4.8107308815224e-23!GO:0043283;biopolymer metabolic process;2.53144031159333e-22!GO:0012505;endomembrane system;1.77212920891083e-21!GO:0005746;mitochondrial respiratory chain;5.25852862414525e-21!GO:0051641;cellular localization;9.70066504912376e-21!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.08157045810736e-20!GO:0051649;establishment of cellular localization;2.31127402297092e-20!GO:0005783;endoplasmic reticulum;7.92215006473214e-20!GO:0000166;nucleotide binding;1.22588030193698e-18!GO:0044445;cytosolic part;2.99856289172511e-18!GO:0022613;ribonucleoprotein complex biogenesis and assembly;3.59626796889315e-18!GO:0005681;spliceosome;4.57439495376939e-18!GO:0008134;transcription factor binding;8.04902583917606e-18!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;8.11877369957912e-18!GO:0051186;cofactor metabolic process;9.45605189836415e-18!GO:0010467;gene expression;9.4596331087406e-18!GO:0050136;NADH dehydrogenase (quinone) activity;9.94156599706607e-18!GO:0003954;NADH dehydrogenase activity;9.94156599706607e-18!GO:0008137;NADH dehydrogenase (ubiquinone) activity;9.94156599706607e-18!GO:0048770;pigment granule;1.18413009614683e-17!GO:0042470;melanosome;1.18413009614683e-17!GO:0044265;cellular macromolecule catabolic process;1.98281066004953e-17!GO:0005794;Golgi apparatus;2.74401606676376e-17!GO:0008092;cytoskeletal protein binding;4.48415850175098e-17!GO:0005654;nucleoplasm;1.2189893583033e-16!GO:0006512;ubiquitin cycle;1.99236408788159e-16!GO:0015935;small ribosomal subunit;2.01879112519155e-16!GO:0051603;proteolysis involved in cellular protein catabolic process;2.77972533439145e-16!GO:0019941;modification-dependent protein catabolic process;5.13637202663704e-16!GO:0043632;modification-dependent macromolecule catabolic process;5.13637202663704e-16!GO:0006511;ubiquitin-dependent protein catabolic process;5.27104825652803e-16!GO:0044257;cellular protein catabolic process;6.19661624822649e-16!GO:0044248;cellular catabolic process;7.40407156158031e-16!GO:0015934;large ribosomal subunit;7.73715435248614e-16!GO:0044432;endoplasmic reticulum part;1.22223702668927e-15!GO:0042775;organelle ATP synthesis coupled electron transport;1.72360333632716e-15!GO:0042773;ATP synthesis coupled electron transport;1.72360333632716e-15!GO:0030964;NADH dehydrogenase complex (quinone);1.92977374142045e-15!GO:0045271;respiratory chain complex I;1.92977374142045e-15!GO:0005747;mitochondrial respiratory chain complex I;1.92977374142045e-15!GO:0016874;ligase activity;4.25589746866528e-15!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;4.25589746866528e-15!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;7.21031715527563e-15!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;7.72416366330331e-15!GO:0016817;hydrolase activity, acting on acid anhydrides;8.79265355079235e-15!GO:0016462;pyrophosphatase activity;9.78671493221291e-15!GO:0006457;protein folding;1.33783954749706e-14!GO:0016192;vesicle-mediated transport;2.19444596114901e-14!GO:0009057;macromolecule catabolic process;2.90938275965423e-14!GO:0017111;nucleoside-triphosphatase activity;3.38454937151755e-14!GO:0043412;biopolymer modification;4.23720903792856e-14!GO:0044451;nucleoplasm part;4.69664065657562e-14!GO:0006605;protein targeting;5.13700904948518e-14!GO:0005761;mitochondrial ribosome;5.13700904948518e-14!GO:0000313;organellar ribosome;5.13700904948518e-14!GO:0022618;protein-RNA complex assembly;9.17949983612718e-14!GO:0043285;biopolymer catabolic process;9.28364091566898e-14!GO:0006732;coenzyme metabolic process;1.12952794839541e-13!GO:0000502;proteasome complex (sensu Eukaryota);1.36187374760712e-13!GO:0008135;translation factor activity, nucleic acid binding;2.5964675977572e-13!GO:0030163;protein catabolic process;2.5964675977572e-13!GO:0048193;Golgi vesicle transport;4.48151365481464e-13!GO:0006464;protein modification process;4.50187236693536e-13!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;5.16315363320643e-13!GO:0017076;purine nucleotide binding;6.44155787609677e-13!GO:0006259;DNA metabolic process;6.57045796421912e-13!GO:0032553;ribonucleotide binding;1.08165759057119e-12!GO:0032555;purine ribonucleotide binding;1.08165759057119e-12!GO:0009055;electron carrier activity;1.38451127125487e-12!GO:0043687;post-translational protein modification;3.8680248891942e-12!GO:0005635;nuclear envelope;6.68918168030873e-12!GO:0007049;cell cycle;7.02310220604368e-12!GO:0051082;unfolded protein binding;1.26297812783897e-11!GO:0006461;protein complex assembly;1.50227494442393e-11!GO:0009056;catabolic process;3.35499385877263e-11!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.070951283354e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.15484784821121e-10!GO:0003712;transcription cofactor activity;1.30067137295554e-10!GO:0008565;protein transporter activity;1.84793428345334e-10!GO:0031965;nuclear membrane;1.94197362302623e-10!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.94503970536794e-10!GO:0045333;cellular respiration;2.55905998838619e-10!GO:0048523;negative regulation of cellular process;2.64456629835272e-10!GO:0042175;nuclear envelope-endoplasmic reticulum network;2.92398090896731e-10!GO:0005789;endoplasmic reticulum membrane;3.30363337261354e-10!GO:0015629;actin cytoskeleton;4.2250127408374e-10!GO:0009060;aerobic respiration;4.73044624607911e-10!GO:0006915;apoptosis;5.65146722669566e-10!GO:0012501;programmed cell death;6.01450697056945e-10!GO:0003779;actin binding;6.73291746340659e-10!GO:0000398;nuclear mRNA splicing, via spliceosome;9.40558346022544e-10!GO:0000375;RNA splicing, via transesterification reactions;9.40558346022544e-10!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;9.40558346022544e-10!GO:0015980;energy derivation by oxidation of organic compounds;1.10056741332704e-09!GO:0006913;nucleocytoplasmic transport;1.25876996765321e-09!GO:0030554;adenyl nucleotide binding;1.49088857690958e-09!GO:0008639;small protein conjugating enzyme activity;1.60564715968658e-09!GO:0007010;cytoskeleton organization and biogenesis;1.85113790881272e-09!GO:0032559;adenyl ribonucleotide binding;1.93048418441941e-09!GO:0006366;transcription from RNA polymerase II promoter;1.96567264739067e-09!GO:0006446;regulation of translational initiation;1.99991607183162e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.31051220948389e-09!GO:0005730;nucleolus;2.38295314096614e-09!GO:0019787;small conjugating protein ligase activity;2.49275895220917e-09!GO:0016469;proton-transporting two-sector ATPase complex;2.51621479508408e-09!GO:0006091;generation of precursor metabolites and energy;2.51621479508408e-09!GO:0005773;vacuole;2.69645696067446e-09!GO:0051169;nuclear transport;2.7776817526883e-09!GO:0005524;ATP binding;2.7776817526883e-09!GO:0015078;hydrogen ion transmembrane transporter activity;2.80768407680257e-09!GO:0004842;ubiquitin-protein ligase activity;2.96754447955008e-09!GO:0048519;negative regulation of biological process;3.49415963307257e-09!GO:0008219;cell death;5.95843939511417e-09!GO:0016265;death;5.95843939511417e-09!GO:0005793;ER-Golgi intermediate compartment;6.81742540000941e-09!GO:0006413;translational initiation;7.74109934610388e-09!GO:0003743;translation initiation factor activity;8.4221228578642e-09!GO:0030029;actin filament-based process;8.62200424893499e-09!GO:0031988;membrane-bound vesicle;1.00814437551559e-08!GO:0006084;acetyl-CoA metabolic process;1.00814437551559e-08!GO:0015986;ATP synthesis coupled proton transport;1.08759234241722e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.08759234241722e-08!GO:0051246;regulation of protein metabolic process;1.39761085937392e-08!GO:0016023;cytoplasmic membrane-bound vesicle;1.40702331638389e-08!GO:0005768;endosome;1.84377918656651e-08!GO:0017038;protein import;1.84600482416656e-08!GO:0006099;tricarboxylic acid cycle;1.93276584688664e-08!GO:0046356;acetyl-CoA catabolic process;1.93276584688664e-08!GO:0030036;actin cytoskeleton organization and biogenesis;1.94223872075875e-08!GO:0044431;Golgi apparatus part;2.16051628372493e-08!GO:0022402;cell cycle process;2.59612239825644e-08!GO:0044453;nuclear membrane part;2.84916661954066e-08!GO:0016604;nuclear body;3.29963286617089e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;3.55985873899328e-08!GO:0005788;endoplasmic reticulum lumen;3.70609715109237e-08!GO:0019829;cation-transporting ATPase activity;3.92123057930928e-08!GO:0015077;monovalent inorganic cation transmembrane transporter activity;4.14663938734493e-08!GO:0031982;vesicle;4.95001825834195e-08!GO:0016887;ATPase activity;6.05581339138159e-08!GO:0051187;cofactor catabolic process;6.23613451073792e-08!GO:0006793;phosphorus metabolic process;6.94935009513921e-08!GO:0006796;phosphate metabolic process;6.94935009513921e-08!GO:0009109;coenzyme catabolic process;9.39152295447375e-08!GO:0031410;cytoplasmic vesicle;9.43740942588285e-08!GO:0006163;purine nucleotide metabolic process;9.5953404651943e-08!GO:0051188;cofactor biosynthetic process;9.5953404651943e-08!GO:0046034;ATP metabolic process;9.73717408852199e-08!GO:0016881;acid-amino acid ligase activity;1.15541130439312e-07!GO:0016564;transcription repressor activity;1.27513498467985e-07!GO:0042623;ATPase activity, coupled;1.42076994584301e-07!GO:0000323;lytic vacuole;1.5613414114841e-07!GO:0005764;lysosome;1.5613414114841e-07!GO:0016491;oxidoreductase activity;1.8635653668259e-07!GO:0009199;ribonucleoside triphosphate metabolic process;2.27155791754302e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;2.43268424958715e-07!GO:0009144;purine nucleoside triphosphate metabolic process;2.43268424958715e-07!GO:0043292;contractile fiber;2.43268424958715e-07!GO:0009141;nucleoside triphosphate metabolic process;3.66539912059475e-07!GO:0007005;mitochondrion organization and biogenesis;4.42027498429141e-07!GO:0044449;contractile fiber part;4.47824029181028e-07!GO:0009150;purine ribonucleotide metabolic process;4.51431636842061e-07!GO:0016607;nuclear speck;5.70670443959575e-07!GO:0006754;ATP biosynthetic process;5.73601783126441e-07!GO:0006753;nucleoside phosphate metabolic process;5.73601783126441e-07!GO:0045259;proton-transporting ATP synthase complex;6.7588454880389e-07!GO:0005643;nuclear pore;7.03261873427286e-07!GO:0009259;ribonucleotide metabolic process;7.7710910655248e-07!GO:0003714;transcription corepressor activity;8.82703384072229e-07!GO:0005856;cytoskeleton;8.98649274317338e-07!GO:0006325;establishment and/or maintenance of chromatin architecture;9.57049948474052e-07!GO:0043069;negative regulation of programmed cell death;1.09555433590423e-06!GO:0043066;negative regulation of apoptosis;1.18333766859386e-06!GO:0000278;mitotic cell cycle;1.22488689827023e-06!GO:0065002;intracellular protein transport across a membrane;1.25998409673636e-06!GO:0006974;response to DNA damage stimulus;1.34084703091459e-06!GO:0051276;chromosome organization and biogenesis;1.35134432925299e-06!GO:0000139;Golgi membrane;1.65485449337274e-06!GO:0009142;nucleoside triphosphate biosynthetic process;1.65485449337274e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.65485449337274e-06!GO:0030016;myofibril;1.70853219197922e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.76001526017119e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.76001526017119e-06!GO:0030532;small nuclear ribonucleoprotein complex;1.86088897277226e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;2.00842260951853e-06!GO:0006164;purine nucleotide biosynthetic process;2.05400651250313e-06!GO:0016310;phosphorylation;2.37369042303985e-06!GO:0031252;leading edge;2.56175442330238e-06!GO:0051170;nuclear import;2.70978537949712e-06!GO:0008361;regulation of cell size;2.95574580895864e-06!GO:0008307;structural constituent of muscle;3.05336192064657e-06!GO:0030120;vesicle coat;3.17177300178902e-06!GO:0030662;coated vesicle membrane;3.17177300178902e-06!GO:0006323;DNA packaging;3.32568686295078e-06!GO:0009108;coenzyme biosynthetic process;3.36271088651756e-06!GO:0048475;coated membrane;3.87029390369486e-06!GO:0030117;membrane coat;3.87029390369486e-06!GO:0007264;small GTPase mediated signal transduction;4.03376943722585e-06!GO:0016049;cell growth;4.67526934746016e-06!GO:0006606;protein import into nucleus;5.01757392013802e-06!GO:0006888;ER to Golgi vesicle-mediated transport;5.40658341350515e-06!GO:0006916;anti-apoptosis;5.87054247800317e-06!GO:0009892;negative regulation of metabolic process;6.31686962814039e-06!GO:0003924;GTPase activity;6.31686962814039e-06!GO:0046930;pore complex;6.9855542843089e-06!GO:0016044;membrane organization and biogenesis;7.37166348478554e-06!GO:0006260;DNA replication;7.49929592995384e-06!GO:0005694;chromosome;8.39154798690228e-06!GO:0005741;mitochondrial outer membrane;8.45843144352102e-06!GO:0031324;negative regulation of cellular metabolic process;8.64681023211249e-06!GO:0042981;regulation of apoptosis;8.81479542693929e-06!GO:0000074;regulation of progression through cell cycle;9.10193259165214e-06!GO:0009152;purine ribonucleotide biosynthetic process;9.29783017543519e-06!GO:0042254;ribosome biogenesis and assembly;9.34765410608937e-06!GO:0051726;regulation of cell cycle;9.35892228654212e-06!GO:0005525;GTP binding;9.8705664643919e-06!GO:0006752;group transfer coenzyme metabolic process;1.0058762450781e-05!GO:0005770;late endosome;1.18922774189074e-05!GO:0009117;nucleotide metabolic process;1.33937100522587e-05!GO:0005839;proteasome core complex (sensu Eukaryota);1.44863730095993e-05!GO:0043067;regulation of programmed cell death;1.48110641256565e-05!GO:0031968;organelle outer membrane;1.48110641256565e-05!GO:0001558;regulation of cell growth;1.48675966563379e-05!GO:0019899;enzyme binding;1.54364515321641e-05!GO:0019867;outer membrane;1.54870832076714e-05!GO:0044262;cellular carbohydrate metabolic process;1.55512112216305e-05!GO:0006357;regulation of transcription from RNA polymerase II promoter;1.56631820559526e-05!GO:0005762;mitochondrial large ribosomal subunit;1.59810536844703e-05!GO:0000315;organellar large ribosomal subunit;1.59810536844703e-05!GO:0016567;protein ubiquitination;1.61267235090351e-05!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.65639310449423e-05!GO:0004812;aminoacyl-tRNA ligase activity;1.65639310449423e-05!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.65639310449423e-05!GO:0044427;chromosomal part;1.75416377473395e-05!GO:0032446;protein modification by small protein conjugation;1.78920499437023e-05!GO:0048471;perinuclear region of cytoplasm;1.82187439684545e-05!GO:0042802;identical protein binding;1.83404547955432e-05!GO:0051789;response to protein stimulus;1.90529895093739e-05!GO:0006986;response to unfolded protein;1.90529895093739e-05!GO:0009719;response to endogenous stimulus;1.90978764526712e-05!GO:0006403;RNA localization;2.00544085132404e-05!GO:0043623;cellular protein complex assembly;2.0510559879749e-05!GO:0050657;nucleic acid transport;2.13260083367823e-05!GO:0051236;establishment of RNA localization;2.13260083367823e-05!GO:0050658;RNA transport;2.13260083367823e-05!GO:0009260;ribonucleotide biosynthetic process;2.15181829527618e-05!GO:0003697;single-stranded DNA binding;2.23472629330994e-05!GO:0022890;inorganic cation transmembrane transporter activity;2.27223978934866e-05!GO:0030017;sarcomere;2.76399067953952e-05!GO:0005048;signal sequence binding;2.98474194921973e-05!GO:0006333;chromatin assembly or disassembly;3.31820678359386e-05!GO:0051427;hormone receptor binding;3.90985125197588e-05!GO:0015630;microtubule cytoskeleton;4.00385411295156e-05!GO:0000245;spliceosome assembly;4.00385411295156e-05!GO:0043038;amino acid activation;4.12633008305384e-05!GO:0006418;tRNA aminoacylation for protein translation;4.12633008305384e-05!GO:0043039;tRNA aminoacylation;4.12633008305384e-05!GO:0065004;protein-DNA complex assembly;4.72876871899235e-05!GO:0050789;regulation of biological process;4.83905061029126e-05!GO:0006979;response to oxidative stress;5.42688321880736e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;5.85159104967134e-05!GO:0003676;nucleic acid binding;6.08800672329744e-05!GO:0005798;Golgi-associated vesicle;6.57954703508201e-05!GO:0030133;transport vesicle;7.34602656128758e-05!GO:0016740;transferase activity;7.56900380916652e-05!GO:0004298;threonine endopeptidase activity;7.6139107091822e-05!GO:0035257;nuclear hormone receptor binding;8.20688172434417e-05!GO:0006082;organic acid metabolic process;8.20688172434417e-05!GO:0032561;guanyl ribonucleotide binding;8.56996117463208e-05!GO:0019001;guanyl nucleotide binding;8.56996117463208e-05!GO:0019752;carboxylic acid metabolic process;8.88400797282524e-05!GO:0003713;transcription coactivator activity;9.55488416540327e-05!GO:0043566;structure-specific DNA binding;0.000104370962035753!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.000107151920090344!GO:0051128;regulation of cellular component organization and biogenesis;0.000107151920090344!GO:0000314;organellar small ribosomal subunit;0.000110370458515877!GO:0005763;mitochondrial small ribosomal subunit;0.000110370458515877!GO:0016070;RNA metabolic process;0.000111558578077761!GO:0000151;ubiquitin ligase complex;0.000112861922610901!GO:0003746;translation elongation factor activity;0.000122699351652017!GO:0022403;cell cycle phase;0.000132392840455896!GO:0008654;phospholipid biosynthetic process;0.000133404231891792!GO:0000785;chromatin;0.000136582586533784!GO:0006281;DNA repair;0.000141280601383869!GO:0007517;muscle development;0.000144783173665029!GO:0016563;transcription activator activity;0.00015724081493499!GO:0006613;cotranslational protein targeting to membrane;0.000163507195505893!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000167406389311121!GO:0044440;endosomal part;0.000171066643450725!GO:0010008;endosome membrane;0.000171066643450725!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000182055797325006!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000186724043862657!GO:0045786;negative regulation of progression through cell cycle;0.000189908600737981!GO:0016481;negative regulation of transcription;0.000191396540302451!GO:0060047;heart contraction;0.00019311574445746!GO:0003015;heart process;0.00019311574445746!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000194386756413491!GO:0051301;cell division;0.000212149172854585!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.00021280994609687!GO:0031674;I band;0.000226503810613431!GO:0006399;tRNA metabolic process;0.000228866079203264!GO:0043284;biopolymer biosynthetic process;0.000237950813685775!GO:0006635;fatty acid beta-oxidation;0.00023861457525313!GO:0051028;mRNA transport;0.000273503606206044!GO:0006414;translational elongation;0.000281064533688756!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00030598956573997!GO:0015002;heme-copper terminal oxidase activity;0.00030598956573997!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00030598956573997!GO:0004129;cytochrome-c oxidase activity;0.00030598956573997!GO:0006950;response to stress;0.000341303023590962!GO:0045454;cell redox homeostasis;0.00036014398941095!GO:0005905;coated pit;0.000371863321344911!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.000382913477840605!GO:0005667;transcription factor complex;0.000415911956364528!GO:0050794;regulation of cellular process;0.000438350075116288!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000442451943248025!GO:0016568;chromatin modification;0.000442627749007472!GO:0043021;ribonucleoprotein binding;0.000485060191287598!GO:0016853;isomerase activity;0.000503131363765349!GO:0045792;negative regulation of cell size;0.000509223821839294!GO:0040008;regulation of growth;0.000528670568455183!GO:0006334;nucleosome assembly;0.000555431816948101!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000557361176137982!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.000565540184461657!GO:0008250;oligosaccharyl transferase complex;0.000570070650282096!GO:0016787;hydrolase activity;0.000604516813857352!GO:0016126;sterol biosynthetic process;0.0006048875911581!GO:0030308;negative regulation of cell growth;0.000606597414741923!GO:0007265;Ras protein signal transduction;0.000620968100822291!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.000623120664925368!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.000623120664925368!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.000623120664925368!GO:0005912;adherens junction;0.000651438514904252!GO:0005865;striated muscle thin filament;0.000687954371717167!GO:0015631;tubulin binding;0.000696640777304185!GO:0007067;mitosis;0.000722999650145958!GO:0000087;M phase of mitotic cell cycle;0.000740564951448788!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000793528492053228!GO:0006839;mitochondrial transport;0.000835886019319604!GO:0016791;phosphoric monoester hydrolase activity;0.000863700364215423!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000874715190853286!GO:0004576;oligosaccharyl transferase activity;0.000878370261426115!GO:0030027;lamellipodium;0.000901116354826419!GO:0016197;endosome transport;0.000955227280821624!GO:0031497;chromatin assembly;0.000959137641966554!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00100183614218076!GO:0030867;rough endoplasmic reticulum membrane;0.00102571770747413!GO:0005769;early endosome;0.00103935271000948!GO:0008016;regulation of heart contraction;0.00105420064907597!GO:0033673;negative regulation of kinase activity;0.00109982107634535!GO:0006469;negative regulation of protein kinase activity;0.00109982107634535!GO:0051920;peroxiredoxin activity;0.00110567464462775!GO:0005774;vacuolar membrane;0.00113743043318705!GO:0046983;protein dimerization activity;0.00114812760522902!GO:0005791;rough endoplasmic reticulum;0.00117290794448622!GO:0004386;helicase activity;0.00118621800020326!GO:0001726;ruffle;0.00125174763552669!GO:0008286;insulin receptor signaling pathway;0.0012986800985001!GO:0006364;rRNA processing;0.00130656853219698!GO:0003724;RNA helicase activity;0.00132608783303226!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00132608783303226!GO:0015399;primary active transmembrane transporter activity;0.00132608783303226!GO:0008026;ATP-dependent helicase activity;0.00138103964117552!GO:0005913;cell-cell adherens junction;0.00138897761459855!GO:0033116;ER-Golgi intermediate compartment membrane;0.00142121512492436!GO:0043681;protein import into mitochondrion;0.00147223834053992!GO:0050662;coenzyme binding;0.00159421730112726!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00165662356316689!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00165662356316689!GO:0006695;cholesterol biosynthetic process;0.00180936623822542!GO:0045926;negative regulation of growth;0.00183317808552926!GO:0051329;interphase of mitotic cell cycle;0.00193373196101978!GO:0051087;chaperone binding;0.00194758283591288!GO:0015992;proton transport;0.00195124230731857!GO:0045892;negative regulation of transcription, DNA-dependent;0.00195124230731857!GO:0008287;protein serine/threonine phosphatase complex;0.0019520681637624!GO:0005885;Arp2/3 protein complex;0.00211221900332035!GO:0006818;hydrogen transport;0.00211221900332035!GO:0005813;centrosome;0.00228097971793525!GO:0051325;interphase;0.00232932130794248!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00234566050792614!GO:0043488;regulation of mRNA stability;0.00239533343791766!GO:0043487;regulation of RNA stability;0.00239533343791766!GO:0016072;rRNA metabolic process;0.00252068267070955!GO:0006612;protein targeting to membrane;0.00254530887578601!GO:0045893;positive regulation of transcription, DNA-dependent;0.00259265560204644!GO:0051348;negative regulation of transferase activity;0.00261185448125279!GO:0019318;hexose metabolic process;0.00272994778185007!GO:0045941;positive regulation of transcription;0.00276249371280832!GO:0016859;cis-trans isomerase activity;0.00276672845711763!GO:0048487;beta-tubulin binding;0.00279154846301729!GO:0006897;endocytosis;0.00289881791632183!GO:0010324;membrane invagination;0.00289881791632183!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00297328568264965!GO:0035258;steroid hormone receptor binding;0.00297328568264965!GO:0006007;glucose catabolic process;0.00299731206938636!GO:0007006;mitochondrial membrane organization and biogenesis;0.00317575784532142!GO:0046474;glycerophospholipid biosynthetic process;0.00330457870892355!GO:0030132;clathrin coat of coated pit;0.00353426498381281!GO:0051168;nuclear export;0.00364487582944999!GO:0004721;phosphoprotein phosphatase activity;0.00365469100734181!GO:0018196;peptidyl-asparagine modification;0.00393509358871975!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00393509358871975!GO:0006891;intra-Golgi vesicle-mediated transport;0.00405211825410661!GO:0048522;positive regulation of cellular process;0.00405211825410661!GO:0008139;nuclear localization sequence binding;0.00407830203239413!GO:0030118;clathrin coat;0.0041991556143177!GO:0006650;glycerophospholipid metabolic process;0.00445278298247036!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.00451054118698692!GO:0044437;vacuolar part;0.00471449449291943!GO:0051287;NAD binding;0.00477495689994427!GO:0005996;monosaccharide metabolic process;0.00477495689994427!GO:0030663;COPI coated vesicle membrane;0.00482327179411313!GO:0030126;COPI vesicle coat;0.00482327179411313!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.00485424072616285!GO:0051252;regulation of RNA metabolic process;0.00492686601361745!GO:0045098;type III intermediate filament;0.00495251354979862!GO:0009165;nucleotide biosynthetic process;0.00497518843361239!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00500962167429335!GO:0006006;glucose metabolic process;0.00503553115478165!GO:0043492;ATPase activity, coupled to movement of substances;0.00506789935643761!GO:0030018;Z disc;0.00508677849180209!GO:0019395;fatty acid oxidation;0.00512121997548959!GO:0006402;mRNA catabolic process;0.0054604632335116!GO:0005665;DNA-directed RNA polymerase II, core complex;0.00556596167864837!GO:0050811;GABA receptor binding;0.00557412176278656!GO:0006118;electron transport;0.00575375629919648!GO:0007243;protein kinase cascade;0.0058076290938506!GO:0001725;stress fiber;0.00595147712672374!GO:0032432;actin filament bundle;0.00595147712672374!GO:0030518;steroid hormone receptor signaling pathway;0.00597297836375257!GO:0008610;lipid biosynthetic process;0.00597939716772893!GO:0009081;branched chain family amino acid metabolic process;0.00608334596279664!GO:0031032;actomyosin structure organization and biogenesis;0.00608801743398949!GO:0005815;microtubule organizing center;0.00625938156451813!GO:0000059;protein import into nucleus, docking;0.00629354597487131!GO:0031072;heat shock protein binding;0.00630160393882653!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00635092164304029!GO:0044255;cellular lipid metabolic process;0.00635092164304029!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00655550882321687!GO:0019843;rRNA binding;0.00658319025320845!GO:0005874;microtubule;0.00660516559665368!GO:0005977;glycogen metabolic process;0.00671168691316969!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0067588832975789!GO:0006626;protein targeting to mitochondrion;0.00690304628976894!GO:0007266;Rho protein signal transduction;0.00709054473572863!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.00712428150265473!GO:0033043;regulation of organelle organization and biogenesis;0.00712428150265473!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00731666730658824!GO:0065007;biological regulation;0.00758562955963034!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00767475073570639!GO:0003899;DNA-directed RNA polymerase activity;0.00769897438664912!GO:0017166;vinculin binding;0.00773041185516446!GO:0042805;actinin binding;0.00791426873767684!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0079609510209603!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00796216387183829!GO:0031124;mRNA 3'-end processing;0.00819187270632594!GO:0030176;integral to endoplasmic reticulum membrane;0.00822014373605775!GO:0005637;nuclear inner membrane;0.008904342736745!GO:0030658;transport vesicle membrane;0.00911579122311146!GO:0005975;carbohydrate metabolic process;0.00917044932105651!GO:0030521;androgen receptor signaling pathway;0.00933742342899268!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.00941190739597691!GO:0006261;DNA-dependent DNA replication;0.00949064140758717!GO:0031902;late endosome membrane;0.00979717177558131!GO:0006643;membrane lipid metabolic process;0.00989069906561586!GO:0000279;M phase;0.00989653220527693!GO:0048500;signal recognition particle;0.00993104765411519!GO:0043433;negative regulation of transcription factor activity;0.00995213816356934!GO:0006631;fatty acid metabolic process;0.0101519043208422!GO:0030137;COPI-coated vesicle;0.0103190687538454!GO:0016311;dephosphorylation;0.010428275713768!GO:0006629;lipid metabolic process;0.0104685367165468!GO:0007051;spindle organization and biogenesis;0.0106390069960127!GO:0005657;replication fork;0.0106391846149541!GO:0051540;metal cluster binding;0.0106791497333522!GO:0051536;iron-sulfur cluster binding;0.0106791497333522!GO:0030049;muscle filament sliding;0.0106791497333522!GO:0033275;actin-myosin filament sliding;0.0106791497333522!GO:0003729;mRNA binding;0.0108979193664575!GO:0005684;U2-dependent spliceosome;0.0109044330198926!GO:0008186;RNA-dependent ATPase activity;0.0111561935674781!GO:0004860;protein kinase inhibitor activity;0.0112998110978823!GO:0016779;nucleotidyltransferase activity;0.0114215715102737!GO:0032780;negative regulation of ATPase activity;0.0114345081414254!GO:0048037;cofactor binding;0.0114712939603042!GO:0006892;post-Golgi vesicle-mediated transport;0.0115466510490233!GO:0019902;phosphatase binding;0.0119002950699354!GO:0005083;small GTPase regulator activity;0.0120716158916177!GO:0030880;RNA polymerase complex;0.0121140101258784!GO:0005869;dynactin complex;0.0123416428851551!GO:0051539;4 iron, 4 sulfur cluster binding;0.0126185071548073!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0126858622623371!GO:0030134;ER to Golgi transport vesicle;0.012886501053926!GO:0000096;sulfur amino acid metabolic process;0.0130056288553709!GO:0006767;water-soluble vitamin metabolic process;0.0139700875625533!GO:0065009;regulation of a molecular function;0.0141440205761385!GO:0008017;microtubule binding;0.0144439382585727!GO:0003690;double-stranded DNA binding;0.0144439382585727!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.0144684027024146!GO:0046467;membrane lipid biosynthetic process;0.0145220968376848!GO:0004722;protein serine/threonine phosphatase activity;0.0159689728278728!GO:0019208;phosphatase regulator activity;0.0160265338551333!GO:0015036;disulfide oxidoreductase activity;0.0166266330009631!GO:0006073;glucan metabolic process;0.0166266330009631!GO:0030127;COPII vesicle coat;0.0166266330009631!GO:0012507;ER to Golgi transport vesicle membrane;0.0166266330009631!GO:0007050;cell cycle arrest;0.0167344898418123!GO:0048644;muscle morphogenesis;0.0168931690372365!GO:0055008;cardiac muscle morphogensis;0.0168931690372365!GO:0005765;lysosomal membrane;0.0170283986992384!GO:0016408;C-acyltransferase activity;0.0171948060481467!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0178079206967761!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0189117139683943!GO:0004185;serine carboxypeptidase activity;0.0190849883921931!GO:0031301;integral to organelle membrane;0.0191050791562402!GO:0006607;NLS-bearing substrate import into nucleus;0.0191321143133066!GO:0001666;response to hypoxia;0.0192367865529792!GO:0004674;protein serine/threonine kinase activity;0.0192982455748859!GO:0048659;smooth muscle cell proliferation;0.0193028261945148!GO:0046489;phosphoinositide biosynthetic process;0.0194725701928618!GO:0030119;AP-type membrane coat adaptor complex;0.020217725924135!GO:0005916;fascia adherens;0.0202391402668426!GO:0006096;glycolysis;0.0202466732924951!GO:0008154;actin polymerization and/or depolymerization;0.0202718730983154!GO:0051129;negative regulation of cellular component organization and biogenesis;0.0203675345221504!GO:0030660;Golgi-associated vesicle membrane;0.0208581512455198!GO:0045045;secretory pathway;0.0211394896147975!GO:0019904;protein domain specific binding;0.0211394896147975!GO:0051101;regulation of DNA binding;0.0211797996346475!GO:0006417;regulation of translation;0.0212827091050757!GO:0007015;actin filament organization;0.0214701538287278!GO:0004448;isocitrate dehydrogenase activity;0.0219715907516924!GO:0005938;cell cortex;0.0220644020323591!GO:0006401;RNA catabolic process;0.0221242804068406!GO:0032787;monocarboxylic acid metabolic process;0.0221858716483856!GO:0030100;regulation of endocytosis;0.0221867958473576!GO:0005819;spindle;0.0221867958473576!GO:0000159;protein phosphatase type 2A complex;0.0222307303818753!GO:0006633;fatty acid biosynthetic process;0.0223661460214025!GO:0030145;manganese ion binding;0.022404047853214!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0224185021169596!GO:0045047;protein targeting to ER;0.0224185021169596!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0224185021169596!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0226457064559608!GO:0000428;DNA-directed RNA polymerase complex;0.0226457064559608!GO:0008601;protein phosphatase type 2A regulator activity;0.0226457064559608!GO:0006778;porphyrin metabolic process;0.0229353158053446!GO:0033013;tetrapyrrole metabolic process;0.0229353158053446!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0230814020842844!GO:0006733;oxidoreduction coenzyme metabolic process;0.0232500968512004!GO:0006672;ceramide metabolic process;0.0234525077261864!GO:0030659;cytoplasmic vesicle membrane;0.0236233974740371!GO:0030131;clathrin adaptor complex;0.0239047374588409!GO:0045947;negative regulation of translational initiation;0.0239047374588409!GO:0005832;chaperonin-containing T-complex;0.0240752081597185!GO:0043034;costamere;0.0242225839080947!GO:0032535;regulation of cellular component size;0.024882927181433!GO:0030031;cell projection biogenesis;0.0248977332807717!GO:0046314;phosphocreatine biosynthetic process;0.0250751624288678!GO:0006603;phosphocreatine metabolic process;0.0250751624288678!GO:0017022;myosin binding;0.0252802928739902!GO:0051270;regulation of cell motility;0.0254176106913129!GO:0016272;prefoldin complex;0.0257618244129711!GO:0004004;ATP-dependent RNA helicase activity;0.0257621988767363!GO:0000082;G1/S transition of mitotic cell cycle;0.0257621988767363!GO:0016301;kinase activity;0.0259292131849894!GO:0055003;cardiac myofibril assembly;0.0261150816016792!GO:0055013;cardiac muscle cell development;0.0261150816016792!GO:0012506;vesicle membrane;0.0267091238657966!GO:0004111;creatine kinase activity;0.0267412031792637!GO:0030832;regulation of actin filament length;0.0271072848936395!GO:0008180;signalosome;0.0272865005207321!GO:0005853;eukaryotic translation elongation factor 1 complex;0.027619066575379!GO:0003711;transcription elongation regulator activity;0.0277579568492262!GO:0006595;polyamine metabolic process;0.028587551352278!GO:0005862;muscle thin filament tropomyosin;0.0287391457358665!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0287391457358665!GO:0048518;positive regulation of biological process;0.0288134503121926!GO:0016363;nuclear matrix;0.029248377024723!GO:0006644;phospholipid metabolic process;0.0298867678577356!GO:0019888;protein phosphatase regulator activity;0.0301008097565771!GO:0014706;striated muscle development;0.0301008097565771!GO:0051393;alpha-actinin binding;0.0302527570888777!GO:0035035;histone acetyltransferase binding;0.0304339215330874!GO:0043022;ribosome binding;0.0304880968015058!GO:0030522;intracellular receptor-mediated signaling pathway;0.0306052238013661!GO:0046483;heterocycle metabolic process;0.0309918776466988!GO:0045187;regulation of circadian sleep/wake cycle, sleep;0.0312848367395923!GO:0004667;prostaglandin-D synthase activity;0.0312848367395923!GO:0050802;circadian sleep/wake cycle, sleep;0.0312848367395923!GO:0022410;circadian sleep/wake cycle process;0.0312848367395923!GO:0042749;regulation of circadian sleep/wake cycle;0.0312848367395923!GO:0046519;sphingoid metabolic process;0.0313442242822422!GO:0030384;phosphoinositide metabolic process;0.031448929325523!GO:0019210;kinase inhibitor activity;0.0315566282530971!GO:0003857;3-hydroxyacyl-CoA dehydrogenase activity;0.0320652754081292!GO:0030172;troponin C binding;0.0325690911510284!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0325839349438105!GO:0004300;enoyl-CoA hydratase activity;0.0326684250423409!GO:0018106;peptidyl-histidine phosphorylation;0.032862519017404!GO:0031589;cell-substrate adhesion;0.0332588328497072!GO:0008312;7S RNA binding;0.0332588328497072!GO:0031901;early endosome membrane;0.0332588328497072!GO:0046164;alcohol catabolic process;0.0339907325047588!GO:0003012;muscle system process;0.0339907325047588!GO:0006936;muscle contraction;0.0339907325047588!GO:0009966;regulation of signal transduction;0.0349174589388512!GO:0030346;protein phosphatase 2B binding;0.034929249133102!GO:0051248;negative regulation of protein metabolic process;0.0349619478599051!GO:0008147;structural constituent of bone;0.0351400025205657!GO:0022415;viral reproductive process;0.0354960611042977!GO:0000303;response to superoxide;0.0358271357445475!GO:0032956;regulation of actin cytoskeleton organization and biogenesis;0.0366187032779119!GO:0050681;androgen receptor binding;0.0366635918681131!GO:0009083;branched chain family amino acid catabolic process;0.0367204895751419!GO:0030911;TPR domain binding;0.0374974807299991!GO:0006066;alcohol metabolic process;0.0374974807299991!GO:0000049;tRNA binding;0.0376014606484202!GO:0001944;vasculature development;0.038132244783089!GO:0007040;lysosome organization and biogenesis;0.0381466596927806!GO:0009066;aspartate family amino acid metabolic process;0.0387749048505165!GO:0051651;maintenance of cellular localization;0.038923718010652!GO:0051261;protein depolymerization;0.0397436264989272!GO:0051146;striated muscle cell differentiation;0.0402233329671487!GO:0003702;RNA polymerase II transcription factor activity;0.0408772256820986!GO:0048660;regulation of smooth muscle cell proliferation;0.0415833645355564!GO:0046365;monosaccharide catabolic process;0.0415879210151398!GO:0031123;RNA 3'-end processing;0.0416141446766681!GO:0000287;magnesium ion binding;0.0424736848959371!GO:0043414;biopolymer methylation;0.0427742541267936!GO:0051370;ZASP binding;0.042924880141925!GO:0051374;FATZ 1 binding;0.042924880141925!GO:0016860;intramolecular oxidoreductase activity;0.042924880141925!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0435779172744365!GO:0010257;NADH dehydrogenase complex assembly;0.0435779172744365!GO:0033108;mitochondrial respiratory chain complex assembly;0.0435779172744365!GO:0006470;protein amino acid dephosphorylation;0.0436146086306721!GO:0006354;RNA elongation;0.0437433802619589!GO:0006740;NADPH regeneration;0.043929365298837!GO:0006098;pentose-phosphate shunt;0.043929365298837!GO:0008652;amino acid biosynthetic process;0.0440482360573137!GO:0000209;protein polyubiquitination;0.0442147676073967!GO:0006611;protein export from nucleus;0.0442786974982385!GO:0019903;protein phosphatase binding;0.0443410564579255!GO:0003682;chromatin binding;0.0443410564579255!GO:0008022;protein C-terminus binding;0.0443410564579255!GO:0005754;mitochondrial proton-transporting ATP synthase, catalytic core;0.0443410564579255!GO:0000275;mitochondrial proton-transporting ATP synthase complex, catalytic core F(1);0.0443410564579255!GO:0045267;proton-transporting ATP synthase, catalytic core;0.0443410564579255!GO:0031371;ubiquitin conjugating enzyme complex;0.0444190662915221!GO:0047485;protein N-terminus binding;0.0447234503114945!GO:0007030;Golgi organization and biogenesis;0.0453457227861555!GO:0031326;regulation of cellular biosynthetic process;0.0461260914037517!GO:0050839;cell adhesion molecule binding;0.0463634536918459!GO:0042168;heme metabolic process;0.0479833033448468!GO:0006509;membrane protein ectodomain proteolysis;0.047985220241371!GO:0033619;membrane protein proteolysis;0.047985220241371!GO:0040029;regulation of gene expression, epigenetic;0.0480063008477151!GO:0044433;cytoplasmic vesicle part;0.0480063008477151!GO:0019320;hexose catabolic process;0.0487811531643893!GO:0003923;GPI-anchor transamidase activity;0.0493842701383405!GO:0016255;attachment of GPI anchor to protein;0.0493842701383405!GO:0042765;GPI-anchor transamidase complex;0.0493842701383405!GO:0001568;blood vessel development;0.0494635275864172!GO:0000305;response to oxygen radical;0.0498209519628213!GO:0030125;clathrin vesicle coat;0.0499868666756576!GO:0030665;clathrin coated vesicle membrane;0.0499868666756576 | |||
|sample_id=10050 | |||
|sample_note= | |||
|sample_sex=female | |||
|sample_species=Human (Homo sapiens) | |||
|sample_strain= | |||
|sample_tissue=heart | |||
|top_motifs=MEF2{A,B,C,D}:4.39413450351;NR5A1,2:3.86202471037;NFE2L1:3.44002654318;IKZF2:2.20694781295;NR1H4:2.13796100178;MYOD1:2.11089590005;ESRRA:2.02213984965;TFAP2{A,C}:1.92424769781;TBP:1.83818195129;FOXL1:1.82182921272;SRF:1.80350646008;ZNF423:1.75191881865;HAND1,2:1.74869860965;RBPJ:1.71708444783;SNAI1..3:1.70193911844;SP1:1.67144932956;ZEB1:1.61707343196;TOPORS:1.58238360537;TEAD1:1.53993612048;GCM1,2:1.48202325481;TFAP4:1.47632825131;TBX4,5:1.46014546451;AR:1.43852928597;XCPE1{core}:1.34486807489;TFCP2:1.33583850388;IKZF1:1.32959019545;T:1.31462036005;ZNF148:1.2798595458;MAFB:1.26682577594;HOX{A4,D4}:1.17411451231;LMO2:1.11381506893;MTF1:1.08478963912;HIC1:1.06089249634;RORA:1.05484449029;GATA4:1.02379074917;ESR1:0.925844696518;PPARG:0.923378295448;UFEwm:0.917840187542;EP300:0.901604545652;GTF2A1,2:0.893107163882;PAX6:0.877725761482;NR6A1:0.810719334394;TFAP2B:0.810154207257;PITX1..3:0.785761854898;PDX1:0.742371934824;GATA6:0.734379231169;TLX1..3_NFIC{dimer}:0.687410444294;MAZ:0.653297225336;TGIF1:0.647940259754;ZIC1..3:0.641663730715;KLF4:0.640832345783;RXR{A,B,G}:0.599730146862;XBP1:0.56513529955;CUX2:0.524456892522;SOX{8,9,10}:0.515445849566;RXRA_VDR{dimer}:0.505015928113;RREB1:0.50345096289;PAX5:0.487380300659;MYBL2:0.481215365776;PATZ1:0.461334603736;HNF4A_NR2F1,2:0.420561153915;NHLH1,2:0.407639879452;HMX1:0.404229864511;MED-1{core}:0.403717064067;FOX{D1,D2}:0.399507496788;SOX5:0.383749361564;MTE{core}:0.340739969796;NFY{A,B,C}:0.277541163636;YY1:0.273645039194;FOXA2:0.258816049368;HNF1A:0.249670823551;NKX2-2,8:0.238484085428;EGR1..3:0.217067500833;GFI1B:0.215151831282;NANOG:0.213944783928;HSF1,2:0.212107211949;NKX6-1,2:0.21105818657;PAX1,9:0.195610498556;EN1,2:0.188797970559;ZFP161:0.167569778285;FOXO1,3,4:0.162627689222;TP53:0.150796842624;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.150610399454;ATF2:0.148763970706;CDC5L:0.144107309672;NKX3-2:0.141775154485;SREBF1,2:0.134746152759;EVI1:0.127894098288;BREu{core}:0.122412796788;GLI1..3:0.117794490477;SPZ1:0.104526336366;FOXP1:0.0918017696878;JUN:0.0805874661389;POU1F1:0.072400549972;GTF2I:0.0643777545968;CDX1,2,4:0.0628472045048;HOX{A6,A7,B6,B7}:0.0521091698317;AIRE:0.0460628711627;NKX2-1,4:0.0328390253948;TLX2:-0.00268545875831;REST:-0.00782988325081;E2F1..5:-0.0181658972133;FOSL2:-0.0416781206393;IRF7:-0.04221106173;GFI1:-0.0460120439902;NRF1:-0.0466012395144;ZNF143:-0.0539207799921;LHX3,4:-0.0665976162135;SMAD1..7,9:-0.0679628572172;EBF1:-0.0736305850667;FOXM1:-0.0845411785608;MZF1:-0.0856724880566;ATF4:-0.0933113251704;NKX2-3_NKX2-5:-0.100375851509;bHLH_family:-0.100951065304;HOX{A5,B5}:-0.108955366435;ZNF238:-0.126673782822;ATF6:-0.148438788347;TFDP1:-0.150325126827;ZBTB16:-0.151553727843;NFIX:-0.185975238705;CEBPA,B_DDIT3:-0.226820758227;NR3C1:-0.263447154074;FOXP3:-0.278473264482;FOX{F1,F2,J1}:-0.316821693559;POU6F1:-0.321784395598;MYFfamily:-0.330486050352;POU3F1..4:-0.346675286651;FOXN1:-0.355154701923;NFATC1..3:-0.372025457041;NFE2:-0.372128512318;PBX1:-0.382479864285;ZBTB6:-0.387258426615;ETS1,2:-0.412126263689;PAX2:-0.429427918979;STAT5{A,B}:-0.457379890161;SOX17:-0.47066599571;DMAP1_NCOR{1,2}_SMARC:-0.481709085621;SPIB:-0.489375736244;SPI1:-0.491311891322;FOXQ1:-0.492447543716;NFE2L2:-0.496340836466;STAT2,4,6:-0.516344430311;FOS_FOS{B,L1}_JUN{B,D}:-0.527209473387;ZNF384:-0.527273347671;FOX{I1,J2}:-0.56075852837;HIF1A:-0.58360693475;ATF5_CREB3:-0.586345207888;BPTF:-0.601832121488;ALX4:-0.608536169285;CREB1:-0.618886048887;GZF1:-0.624407410695;PRDM1:-0.630422600283;BACH2:-0.630883609492;TAL1_TCF{3,4,12}:-0.636483156517;HLF:-0.644424255767;POU2F1..3:-0.644739178893;LEF1_TCF7_TCF7L1,2:-0.657349745903;NFKB1_REL_RELA:-0.660226942119;RFX1:-0.694398075705;MYB:-0.69518600518;TEF:-0.710898941328;NKX3-1:-0.759501871734;VSX1,2:-0.782158738973;ARID5B:-0.798285407435;RFX2..5_RFXANK_RFXAP:-0.850437396987;IRF1,2:-0.856946446772;ONECUT1,2:-0.862449373739;NANOG{mouse}:-0.872255910689;ELF1,2,4:-0.884688548514;STAT1,3:-0.888353009536;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.906314244208;PAX4:-0.970258610526;ADNP_IRX_SIX_ZHX:-1.07114175978;RUNX1..3:-1.07720916848;OCT4_SOX2{dimer}:-1.08353022209;HOXA9_MEIS1:-1.11250049676;HES1:-1.11500262912;FOXD3:-1.14172518034;SOX2:-1.19505625185;ALX1:-1.26047230204;ELK1,4_GABP{A,B1}:-1.262126022;HMGA1,2:-1.28824112832;PAX3,7:-1.35552978144;DBP:-1.37868142336;POU5F1:-1.44769701468;HBP1_HMGB_SSRP1_UBTF:-1.45807950003;PRRX1,2:-1.46360048812;AHR_ARNT_ARNT2:-1.53907251144;NFIL3:-1.55590035777;CRX:-1.57302120015;PAX8:-1.71077013925 | |||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10050-101G5;search_select_hide=table117:FF:10050-101G5 | |||
}} | }} |
Latest revision as of 12:17, 3 June 2020
Name: | heart, adult, diseased post-infarction, donor1 |
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Species: | Human (Homo sapiens) |
Library ID: | CNhs11757 |
Sample type: | tissues |
Genomic View: | UCSC |
RefEX: | Specific genes |
FANTOM CAT: | 1 |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11757
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11757
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.549 |
10 | 10 | 0.0439 |
100 | 100 | 0.63 |
101 | 101 | 0.963 |
102 | 102 | 0.382 |
103 | 103 | 0.158 |
104 | 104 | 0.466 |
105 | 105 | 0.357 |
106 | 106 | 0.801 |
107 | 107 | 0.0825 |
108 | 108 | 0.198 |
109 | 109 | 0.905 |
11 | 11 | 0.571 |
110 | 110 | 0.398 |
111 | 111 | 0.366 |
112 | 112 | 0.92 |
113 | 113 | 0.741 |
114 | 114 | 0.15 |
115 | 115 | 0.24 |
116 | 116 | 0.76 |
117 | 117 | 0.0266 |
118 | 118 | 0.0723 |
119 | 119 | 0.723 |
12 | 12 | 0.877 |
120 | 120 | 0.027 |
121 | 121 | 0.811 |
122 | 122 | 0.122 |
123 | 123 | 0.181 |
124 | 124 | 0.135 |
125 | 125 | 0.599 |
126 | 126 | 0.474 |
127 | 127 | 0.709 |
128 | 128 | 0.556 |
129 | 129 | 0.437 |
13 | 13 | 0.763 |
130 | 130 | 0.99 |
131 | 131 | 0.6 |
132 | 132 | 0.0223 |
133 | 133 | 0.994 |
134 | 134 | 0.339 |
135 | 135 | 0.919 |
136 | 136 | 0.25 |
137 | 137 | 0.397 |
138 | 138 | 0.519 |
139 | 139 | 0.276 |
14 | 14 | 0.477 |
140 | 140 | 0.917 |
141 | 141 | 0.522 |
142 | 142 | 0.694 |
143 | 143 | 0.00419 |
144 | 144 | 0.702 |
145 | 145 | 0.262 |
146 | 146 | 0.585 |
147 | 147 | 0.314 |
148 | 148 | 0.139 |
149 | 149 | 0.199 |
15 | 15 | 0.0576 |
150 | 150 | 0.889 |
151 | 151 | 0.721 |
152 | 152 | 0.214 |
153 | 153 | 0.817 |
154 | 154 | 0.991 |
155 | 155 | 0.722 |
156 | 156 | 0.276 |
157 | 157 | 0.851 |
158 | 158 | 0.04 |
159 | 159 | 0.412 |
16 | 16 | 0.892 |
160 | 160 | 0.51 |
161 | 161 | 0.543 |
162 | 162 | 0.597 |
163 | 163 | 0.219 |
164 | 164 | 0.148 |
165 | 165 | 0.893 |
166 | 166 | 0.446 |
167 | 167 | 0.0592 |
168 | 168 | 0.331 |
169 | 169 | 0.161 |
17 | 17 | 0.594 |
18 | 18 | 0.0878 |
19 | 19 | 0.219 |
2 | 2 | 0.119 |
20 | 20 | 0.398 |
21 | 21 | 0.974 |
22 | 22 | 0.23 |
23 | 23 | 0.604 |
24 | 24 | 0.207 |
25 | 25 | 0.473 |
26 | 26 | 0.262 |
27 | 27 | 0.982 |
28 | 28 | 0.458 |
29 | 29 | 0.00579 |
3 | 3 | 0.0895 |
30 | 30 | 0.0785 |
31 | 31 | 0.821 |
32 | 32 | 0.446 |
33 | 33 | 0.276 |
34 | 34 | 0.209 |
35 | 35 | 0.15 |
36 | 36 | 0.0213 |
37 | 37 | 0.402 |
38 | 38 | 0.874 |
39 | 39 | 0.386 |
4 | 4 | 0.844 |
40 | 40 | 0.51 |
41 | 41 | 0.27 |
42 | 42 | 0.0688 |
43 | 43 | 0.182 |
44 | 44 | 0.129 |
45 | 45 | 0.278 |
46 | 46 | 0.286 |
47 | 47 | 0.456 |
48 | 48 | 0.374 |
49 | 49 | 0.304 |
5 | 5 | 0.175 |
50 | 50 | 0.571 |
51 | 51 | 0.477 |
52 | 52 | 0.247 |
53 | 53 | 0.964 |
54 | 54 | 0.906 |
55 | 55 | 0.0357 |
56 | 56 | 0.704 |
57 | 57 | 0.234 |
58 | 58 | 0.377 |
59 | 59 | 0.965 |
6 | 6 | 0.614 |
60 | 60 | 0.978 |
61 | 61 | 0.486 |
62 | 62 | 0.435 |
63 | 63 | 0.95 |
64 | 64 | 0.799 |
65 | 65 | 0.529 |
66 | 66 | 0.155 |
67 | 67 | 0.662 |
68 | 68 | 0.659 |
69 | 69 | 0.482 |
7 | 7 | 0.977 |
70 | 70 | 0.139 |
71 | 71 | 0.0178 |
72 | 72 | 0.456 |
73 | 73 | 0.499 |
74 | 74 | 0.0114 |
75 | 75 | 0.0591 |
76 | 76 | 0.0771 |
77 | 77 | 0.0502 |
78 | 78 | 0.338 |
79 | 79 | 0.539 |
8 | 8 | 0.449 |
80 | 80 | 0.303 |
81 | 81 | 0.272 |
82 | 82 | 0.429 |
83 | 83 | 0.187 |
84 | 84 | 0.556 |
85 | 85 | 0.292 |
86 | 86 | 0.336 |
87 | 87 | 0.891 |
88 | 88 | 0.929 |
89 | 89 | 0.519 |
9 | 9 | 0.511 |
90 | 90 | 0.00213 |
91 | 91 | 0.937 |
92 | 92 | 0.612 |
93 | 93 | 0.407 |
94 | 94 | 0.00381 |
95 | 95 | 0.671 |
96 | 96 | 0.43 |
97 | 97 | 0.879 |
98 | 98 | 0.901 |
99 | 99 | 0.116 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11757
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
DOID:5844 myocardial infarction
FF:0010016 human heart - adult sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
DOID: Disease
4 (disease)
1287 (cardiovascular system disease)
7 (disease of anatomical entity)
178 (vascular disease)
326 (ischemia)
3978 (extrinsic cardiomyopathy)
114 (heart disease)
3394 (myocardial ischemia)
5844 (myocardial infarction)
UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0007100 (primary circulatory organ)
0000479 (tissue)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003103 (compound organ)
0001009 (circulatory system)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010016 (human heart - adult sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
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