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FFCP PHASE1:Mm9::chr4:155387944..155387958,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr4:155387944..155387958,+
|DHSsupport=NA
|short_description=p1@Tnfrsf4
|DPIdataset=NA
|description=CAGE_peak_1_at_Tnfrsf4_5end
|association_with_transcript=0bp_to_ENSMUST00000030952_5end
|EntrezGene=22163
|EntrezGene=22163
|HGNC=
|HGNC=
|MCL_coexpression_id=467
|TSSclassifier=NA
|UniProt=B1ASL3
|UniProt=B1ASL3
|association_with_transcript=0bp_to_ENSMUST00000030952_5end
|cluster_id=chr4:155387944..155387958,+
|description=CAGE_peak_1_at_Tnfrsf4_5end
|id=chr4:155387944..155387958,+
|ontology_enrichment_celltype=CL:0000791!3.62e-08!9;CL:0000789!3.62e-08!9;CL:0002420!3.62e-08!9;CL:0002419!3.62e-08!9;CL:0000790!3.62e-08!9;CL:0000624!4.18e-08!8
|ontology_enrichment_celltype_v019_2=CL:0000624,8.00e-15,8;CL:0000791,5.72e-13,9;CL:0000789,5.72e-13,9;CL:0002420,5.72e-13,9;CL:0002419,5.72e-13,9;CL:0000790,5.72e-13,9;CL:0000893,2.91e-11,6;CL:0002489,2.91e-11,6;CL:0000898,2.91e-11,6;CL:0000809,2.91e-11,6;CL:0000810,2.91e-11,6;CL:0000895,2.91e-11,6;CL:0000808,2.91e-11,6;CL:0000894,2.91e-11,6;CL:0000806,2.91e-11,6;CL:0000807,2.91e-11,6;CL:0000805,2.91e-11,6;CL:0002425,2.91e-11,6;CL:0002436,2.91e-11,6;CL:0002427,2.91e-11,6;CL:0002428,2.91e-11,6;CL:0002429,2.91e-11,6;CL:0002433,2.91e-11,6;CL:0002431,2.91e-11,6;CL:0002432,2.91e-11,6;CL:0002031,5.47e-11,25;CL:0000084,2.81e-10,11;CL:0000827,2.81e-10,11;CL:0000838,2.86e-09,12;CL:0000542,2.03e-08,13;CL:0000051,2.03e-08,13;CL:0000988,8.35e-08,32;CL:0002032,8.35e-08,32;CL:0000037,8.35e-08,32;CL:0000837,8.35e-08,32
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000065!2.64e-15!41;UBERON:0001004!1.33e-14!42;UBERON:0000072!1.78e-12!27;UBERON:0004177!2.64e-11!29;UBERON:0006562!5.79e-11!24;UBERON:0001557!5.79e-11!24;UBERON:0001042!5.79e-11!24;UBERON:0008814!5.79e-11!24;UBERON:0009145!5.79e-11!24;UBERON:0002370!7.05e-11!23;UBERON:0000974!7.05e-11!23;UBERON:0004807!7.05e-11!23;UBERON:0005058!7.05e-11!23;UBERON:0003351!7.05e-11!23;UBERON:0009113!7.05e-11!23;UBERON:0003295!7.05e-11!23;UBERON:0009722!7.05e-11!23;UBERON:0005562!7.05e-11!23;UBERON:0007690!7.05e-11!23;UBERON:0003408!4.43e-10!24;UBERON:0002193!1.41e-09!48;UBERON:0000063!2.18e-08!35;UBERON:0002390!8.14e-08!45;UBERON:0003061!8.14e-08!45;UBERON:0005911!1.12e-07!69
|ontology_enrichment_uberon_v019_2=UBERON:0000065,2.17e-19,41;UBERON:0001004,9.17e-19,42;UBERON:0002193,5.63e-16,48;UBERON:0002405,5.63e-16,48;UBERON:0004177,3.97e-15,29;UBERON:0005057,3.97e-15,29;UBERON:0000072,1.34e-14,27;UBERON:0002370,3.46e-14,23;UBERON:0000974,3.46e-14,23;UBERON:0004807,3.46e-14,23;UBERON:0005058,3.46e-14,23;UBERON:0003351,3.46e-14,23;UBERON:0009113,3.46e-14,23;UBERON:0003295,3.46e-14,23;UBERON:0009722,3.46e-14,23;UBERON:0005562,3.46e-14,23;UBERON:0007690,3.46e-14,23;UBERON:0006562,2.00e-13,24;UBERON:0003408,2.00e-13,24;UBERON:0001557,2.00e-13,24;UBERON:0001042,2.00e-13,24;UBERON:0008814,2.00e-13,24;UBERON:0009145,2.00e-13,24;UBERON:0002390,1.38e-12,45;UBERON:0003061,1.38e-12,45;UBERON:0005911,2.00e-12,69;UBERON:0000077,1.06e-11,35;UBERON:0001007,5.83e-10,116;UBERON:0001555,5.83e-10,116;UBERON:0007026,5.83e-10,116;UBERON:0001041,5.97e-10,80;UBERON:0004119,1.22e-09,118;UBERON:0000925,1.22e-09,118;UBERON:0006595,1.22e-09,118;UBERON:0004921,1.55e-08,114;UBERON:0003929,6.10e-08,55;UBERON:0007811,1.18e-07,36;UBERON:0000014,2.42e-07,5;UBERON:0001003,2.42e-07,5;UBERON:0002097,2.42e-07,5;UBERON:0002199,2.42e-07,5;UBERON:0007029,2.42e-07,5;UBERON:0007376,2.42e-07,5;UBERON:0002416,2.42e-07,5;UBERON:0007383,2.42e-07,5;UBERON:0000490,2.59e-07,66;UBERON:0005178,5.62e-07,17;UBERON:0005181,5.62e-07,17;UBERON:0002224,5.62e-07,17;UBERON:0000915,5.62e-07,17;UBERON:0008947,5.62e-07,17;UBERON:0003258,5.62e-07,17
|phase1_expression=0,18.8446720125255,20.0199665331396,0,0,9.73699777088961,14.7175963575181,223.383349553927,143.745285316852,187.017556531273,176.525725240496,187.384801480045,3.93761678841773,4.10875891369288,0.666219523631325,1.21485160433896,0,2.20823515750766,2.74228867211478,1.27316895539409,0.0850432901510698,0,0,14.5593104742,13.3057383018959,24.1177424928308,21.1073378117947,27.7957890164797,0,0,12.6386391073524,37.4668097341182,35.6737576799051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,58.7543335029189,0.336093799142464,0,2.86533439938757,1.54701627683233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454357159999104,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.865964164044856,1.26679932737549,1.01104889002957,0.68510327831436,23.8222852955398,0.29688427812965,0,0,0,0,0.117588707135705,0,0,0,0,0,0.220841518460394,0,0,0,0,0.766371165625774,0,0,0,0,0.457500602818626,0,0,0,0,0,0.203678727700633,0,0,0.210441855886474,0,0.229902104433473,0,0.452114453507145,0.272145996605311,0,0.374806898238915,0,0,0,0,0.219195732427575,0,0.696504333044333,0,0,0,0,0,0,0,0.180062061461015,0,0,0.308534225774757,0.465067889500816,0,0.233530684734339,0,0.164167464079095,0.162137619091711,0,0.219550115291051,0,0.420579897128254,0.308713837137853,0,0,0,0,0,0,0,0.190225626112559,0,0,0.502670417600539,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0.0701358198903186,0.189709611372772,0,0,0,0,0,0,0,0,0.241177159752417,0,0.287696137450811,0.324270453550071,0,0,1.11642284300551,0.312037673114561,0,0.358794827043824,0,0.739012760666419,0,0,0,0,3.35012514883632,8.09348379012447,1.56106918286239,0.945810864637146,2.21464689648775,1.2756381492599,2.13022309130459,3.45369963731791,3.03763023021174,0,0,0,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,9.39851641766436,1.13025098687134,1.02531972377865,1.67121281604391,2.9545361954111,0,0,2.39219233116994,0,0,0.376736914009382,1.36694227721025,1.60144721244566,0,0,0,0.954670618015114,0,0,0,0.418176592028937,0,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,8.21628913633263,0.405450430580328,0.205421914329655,0.51968329191118,0.716106782669926,0.596044064343795,6.37035882455835,6.94140777720513,6.96668504642219,5.18206285253999,5.34378781225255,8.86866714731747,7.21588812302471,7.12949103307571,0.226730383615211,0.221985953374065,0,0,0,0.375364950902364,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0.44449345560323,0,0.320919209591815,0.252697211763798,0.50695859978048,0.377252682772152,0.749132059759059,0.384150914429216,0.631790158511746,0,0,0,0.412085900803307,0.735994600671987,0.342869252385415,0.354951612318675,0.238436189947321,0.145346416632329,0.282328141245992,0.423073039458382,0.548783918618318,0.526139422875686,0.679020569229309,0,0.237270036248348,0.197008964751127,1.22769312950907,0.309873682371932,0.192906610981141,0.249810577937946,0.233931608445408,0.859484216193193,0,0.441182838239031,0.231867835620421
|phase1_expression=0,18.8446720125255,20.0199665331396,0,0,9.73699777088961,14.7175963575181,223.383349553927,143.745285316852,187.017556531273,176.525725240496,187.384801480045,3.93761678841773,4.10875891369288,0.666219523631325,1.21485160433896,0,2.20823515750766,2.74228867211478,1.27316895539409,0.0850432901510698,0,0,14.5593104742,13.3057383018959,24.1177424928308,21.1073378117947,27.7957890164797,0,0,12.6386391073524,37.4668097341182,35.6737576799051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,58.7543335029189,0.336093799142464,0,2.86533439938757,1.54701627683233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454357159999104,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.865964164044856,1.26679932737549,1.01104889002957,0.68510327831436,23.8222852955398,0.29688427812965,0,0,0,0,0.117588707135705,0,0,0,0,0,0.220841518460394,0,0,0,0,0.766371165625774,0,0,0,0,0.457500602818626,0,0,0,0,0,0.203678727700633,0,0,0.210441855886474,0,0.229902104433473,0,0.452114453507145,0.272145996605311,0,0.374806898238915,0,0,0,0,0.219195732427575,0,0.696504333044333,0,0,0,0,0,0,0,0.180062061461015,0,0,0.308534225774757,0.465067889500816,0,0.233530684734339,0,0.164167464079095,0.162137619091711,0,0.219550115291051,0,0.420579897128254,0.308713837137853,0,0,0,0,0,0,0,0.190225626112559,0,0,0.502670417600539,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0.0701358198903186,0.189709611372772,0,0,0,0,0,0,0,0,0.241177159752417,0,0.287696137450811,0.324270453550071,0,0,1.11642284300551,0.312037673114561,0,0.358794827043824,0,0.739012760666419,0,0,0,0,3.35012514883632,8.09348379012447,1.56106918286239,0.945810864637146,2.21464689648775,1.2756381492599,2.13022309130459,3.45369963731791,3.03763023021174,0,0,0,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,9.39851641766436,1.13025098687134,1.02531972377865,1.67121281604391,2.9545361954111,0,0,2.39219233116994,0,0,0.376736914009382,1.36694227721025,1.60144721244566,0,0,0,0.954670618015114,0,0,0,0.418176592028937,0,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,8.21628913633263,0.405450430580328,0.205421914329655,0.51968329191118,0.716106782669926,0.596044064343795,6.37035882455835,6.94140777720513,6.96668504642219,5.18206285253999,5.34378781225255,8.86866714731747,7.21588812302471,7.12949103307571,0.226730383615211,0.221985953374065,0,0,0,0.375364950902364,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0.44449345560323,0,0.320919209591815,0.252697211763798,0.50695859978048,0.377252682772152,0.749132059759059,0.384150914429216,0.631790158511746,0,0,0,0.412085900803307,0.735994600671987,0.342869252385415,0.354951612318675,0.238436189947321,0.145346416632329,0.282328141245992,0.423073039458382,0.548783918618318,0.526139422875686,0.679020569229309,0,0.237270036248348,0.197008964751127,1.22769312950907,0.309873682371932,0.192906610981141,0.249810577937946,0.233931608445408,0.859484216193193,0,0.441182838239031,0.231867835620421
|short_description=p1@Tnfrsf4
}}
}}

Latest revision as of 20:31, 26 September 2015

Short description:p1@Tnfrsf4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Tnfrsf4_5end
Coexpression cluster:MCL_coexpression_mm9:467
Association with transcript: 0bp_to_ENSMUST00000030952_5end
EntrezGene:Tnfrsf4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Tnfrsf4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I518.84
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I620.02
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I79.74
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I814.72
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9223.38
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7143.75
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2187.02
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6176.53
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1187.38
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.94
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.11
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.21
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.21
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.74
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D114.56
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D213.31
GP2+ M cell, pool1.CNhs13228.11845-124H924.12
GP2+ M cell, pool2.CNhs13231.11846-124I121.11
GP2+ M cell, pool3.CNhs13240.11847-124I227.80
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C812.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I337.47
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G635.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I958.75
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.87
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H923.82
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A63.35
lung, embryo E18.CNhs10583.1287-20I68.09
lung, neonate N00.CNhs11224.640-42C61.56
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A32.21
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A42.13
lung, neonate N25.CNhs11119.1359-25C73.45
lung, neonate N30.CNhs11133.1394-42H23.04
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C39.40
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H31.03
skin, neonate N06.CNhs11097.693-20I51.67
skin, neonate N10.CNhs11108.762-6C42.95
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G22.39
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H11.37
spleen, neonate N25.CNhs11099.1354-25G31.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B58.22
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F86.37
thymus, neonate N03.CNhs11137.2104-43C76.94
thymus, neonate N06.CNhs11197.681-26C46.97
thymus, neonate N07.CNhs11211.713-19D35.18
thymus, neonate N10.CNhs11194.748-24E45.34
thymus, neonate N20.CNhs11186.820-7A28.87
thymus, neonate N25.CNhs11125.1362-25G77.22
thymus, neonate N30.CNhs11132.1393-42G27.13
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CD4-positive, alpha-beta T cell8.00e-158
mature alpha-beta T cell5.72e-139
alpha-beta T cell5.72e-139
immature T cell5.72e-139
mature T cell5.72e-139
immature alpha-beta T cell5.72e-139
thymocyte2.91e-116
double negative thymocyte2.91e-116
naive T cell2.91e-116
double-positive, alpha-beta thymocyte2.91e-116
CD4-positive, alpha-beta thymocyte2.91e-116
naive thymus-derived CD4-positive, alpha-beta T cell2.91e-116
DN4 thymocyte2.91e-116
DN1 thymic pro-T cell2.91e-116
DN2 thymocyte2.91e-116
DN3 thymocyte2.91e-116
immature single positive thymocyte2.91e-116
early T lineage precursor2.91e-116
mature CD4 single-positive thymocyte2.91e-116
resting double-positive thymocyte2.91e-116
double-positive blast2.91e-116
CD69-positive double-positive thymocyte2.91e-116
CD69-positive, CD4-positive single-positive thymocyte2.91e-116
CD4-positive, CD8-intermediate double-positive thymocyte2.91e-116
CD24-positive, CD4 single-positive thymocyte2.91e-116
hematopoietic lineage restricted progenitor cell5.47e-1125
T cell2.81e-1011
pro-T cell2.81e-1011
lymphoid lineage restricted progenitor cell2.86e-0912
lymphocyte2.03e-0813
common lymphoid progenitor2.03e-0813
hematopoietic cell8.35e-0832
hematopoietic oligopotent progenitor cell8.35e-0832
hematopoietic stem cell8.35e-0832
hematopoietic multipotent progenitor cell8.35e-0832

Uber anatomy
Ontology termp-valuen
respiratory tract2.17e-1941
respiratory system9.17e-1942
hemolymphoid system5.63e-1648
immune system5.63e-1648
hemopoietic organ3.97e-1529
immune organ3.97e-1529
segment of respiratory tract1.34e-1427
thymus3.46e-1423
neck3.46e-1423
respiratory system epithelium3.46e-1423
hemolymphoid system gland3.46e-1423
pharyngeal epithelium3.46e-1423
thymic region3.46e-1423
pharyngeal gland3.46e-1423
entire pharyngeal arch endoderm3.46e-1423
thymus primordium3.46e-1423
early pharyngeal endoderm3.46e-1423
pharynx2.00e-1324
gland of gut2.00e-1324
upper respiratory tract2.00e-1324
chordate pharynx2.00e-1324
pharyngeal arch system2.00e-1324
pharyngeal region of foregut2.00e-1324
hematopoietic system1.38e-1245
blood island1.38e-1245
endo-epithelium2.00e-1269
mixed endoderm/mesoderm-derived structure1.06e-1135
digestive system5.83e-10116
digestive tract5.83e-10116
primitive gut5.83e-10116
foregut5.97e-1080
endoderm-derived structure1.22e-09118
endoderm1.22e-09118
presumptive endoderm1.22e-09118
subdivision of digestive tract1.55e-08114
gut epithelium6.10e-0855
craniocervical region1.18e-0736
zone of skin2.42e-075
skin epidermis2.42e-075
skin of body2.42e-075
integument2.42e-075
surface2.42e-075
outer epithelium2.42e-075
integumental system2.42e-075
enveloping layer of ectoderm2.42e-075
unilaminar epithelium2.59e-0766
thoracic cavity element5.62e-0717
thoracic segment organ5.62e-0717
thoracic cavity5.62e-0717
thoracic segment of trunk5.62e-0717
respiratory primordium5.62e-0717
endoderm of foregut5.62e-0717
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