FFCP PHASE1:Mm9::chr1:165992260..165992301,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr1:165992260..165992301,+ to FFCP PHASE1:Mm9::chr1:165992260..165992301,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=20343 | |EntrezGene=20343 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt=P18337,Q3TCF3,E9Q5W7,Q3UV83 | |UniProt=P18337,Q3TCF3,E9Q5W7,Q3UV83 | ||
|association_with_transcript=53bp_to_ENSMUST00000027871,ENSMUST00000097491,ENSMUST00000167117,NM_001164059,NM_011346,uc007dhy.2,uc011wuv.1_5end | |||
|cluster_id=chr1:165992260..165992301,+ | |||
|description=CAGE_peak_2_at_Sell_5end | |||
|id=chr1:165992260..165992301,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.23e-11,32;CL:0002032,3.23e-11,32;CL:0000037,3.23e-11,32;CL:0000837,3.23e-11,32;CL:0000791,1.27e-08,9;CL:0000789,1.27e-08,9;CL:0002420,1.27e-08,9;CL:0002419,1.27e-08,9;CL:0000790,1.27e-08,9;CL:0000624,1.39e-07,8;CL:0000838,1.81e-07,12;CL:0002031,3.18e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!8.54e-13!48;UBERON:0002405!1.91e-12!70;UBERON:0004177!4.70e-12!29;UBERON:0002390!1.01e-11!45;UBERON:0003061!1.01e-11!45;UBERON:0005057!1.22e-10!51;UBERON:0003408!2.76e-09!24;UBERON:0001041!4.33e-09!92;UBERON:0002370!5.99e-09!23;UBERON:0000974!5.99e-09!23;UBERON:0004807!5.99e-09!23;UBERON:0005058!5.99e-09!23;UBERON:0003351!5.99e-09!23;UBERON:0009113!5.99e-09!23;UBERON:0003295!5.99e-09!23;UBERON:0009722!5.99e-09!23;UBERON:0005562!5.99e-09!23;UBERON:0007690!5.99e-09!23;UBERON:0000077!1.39e-08!97;UBERON:0006562!3.71e-08!24;UBERON:0001557!3.71e-08!24;UBERON:0001042!3.71e-08!24;UBERON:0008814!3.71e-08!24;UBERON:0009145!3.71e-08!24;UBERON:0003104!6.70e-08!131;UBERON:0009142!6.70e-08!131;UBERON:0001004!1.31e-07!42;UBERON:0000065!2.67e-07!41;UBERON:0000926!3.38e-07!193;UBERON:0004120!3.38e-07!193;UBERON:0006603!3.38e-07!193 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.36e-21,48;UBERON:0002405,6.36e-21,48;UBERON:0002390,3.24e-20,45;UBERON:0003061,3.24e-20,45;UBERON:0004177,2.30e-18,29;UBERON:0005057,2.30e-18,29;UBERON:0000077,1.21e-14,35;UBERON:0003408,3.35e-14,24;UBERON:0002370,1.05e-13,23;UBERON:0000974,1.05e-13,23;UBERON:0004807,1.05e-13,23;UBERON:0005058,1.05e-13,23;UBERON:0003351,1.05e-13,23;UBERON:0009113,1.05e-13,23;UBERON:0003295,1.05e-13,23;UBERON:0009722,1.05e-13,23;UBERON:0005562,1.05e-13,23;UBERON:0007690,1.05e-13,23;UBERON:0001041,3.46e-13,80;UBERON:0006562,7.60e-13,24;UBERON:0001557,7.60e-13,24;UBERON:0001042,7.60e-13,24;UBERON:0008814,7.60e-13,24;UBERON:0009145,7.60e-13,24;UBERON:0001004,1.58e-12,42;UBERON:0000065,4.80e-12,41;UBERON:0000072,1.15e-10,27;UBERON:0005911,1.45e-10,69;UBERON:0003081,8.47e-10,87;UBERON:0003929,1.58e-08,55;UBERON:0000490,3.88e-08,66;UBERON:0002530,1.28e-07,65;UBERON:0007811,3.26e-07,36;UBERON:0002368,4.33e-07,60 | |||
|phase1_expression=0,0,0,0,0,0,0,75.6662675367637,9.43284438416167,8.66038747391376,4.10923123741212,2.55270908785077,94.1604014621632,88.9939696625394,10.3264026162855,13.3633676477285,5.59649502502517,52.3667194494675,56.4911466455644,30.1316652776601,1.36069264241712,0.0992909512008853,0,0.799962113967033,1.60586496747019,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,336.917962743211,189.864488719284,314.637770128253,378.821078291973,392.751153851106,343.255819593026,0,0,0,0,0,0,0,0,0,39.428912423568,71.0854899171118,94.7784513581748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,2.58127163094416,0,0,0,0,6.74133216632409,0,0,0,0,0,0,0,0,0,0,4.68153906848146,95.5480790658064,0.593768556259299,0.520455980298408,0.608930956624282,0.691846491768175,0.60289056221049,0.470354828542819,0.251333182659351,0,2.02439099687876,61.9227386364912,3.39710384889559,11.0420759230197,8.24287930329878,0,0,0.209446706813455,0,28.1565542588913,33.5945529356308,29.2261522268049,0,0.457500602818626,0,0,0,0,0,0.305518091550949,22.2688477392066,0,0,0,0,0.180062129805349,0,0.204109497453984,0,0,0,0,0,0,0,0,1.0447564995665,0.411564272815887,0.199034266818493,54.7726286104323,30.8817488537658,32.6788024304931,0,0.234526059981096,0,0,0.393528463494808,0.154267112887378,0,0,0.583826711835847,0,0.164167464079095,0.486412857275134,0.292399974850665,0,0.402619256281115,0,0,0.330418782983798,0.264450566663544,0,0,0.257734922644187,0.201683524623343,0.22237804384487,0.190225626112559,0.474529061544512,0.329397909448022,0.251335208800269,0.198956472041151,0.38992817423824,0.898819408654221,0,0.398282546508734,0,0.114248512609729,0,0,0,0.350679099451593,0.0632365371242573,0.295220295959204,0,0,0,0.333690211432188,1.76903095601883,2.69834534861824,7.1001042485976,5.54707467430559,6.62027214631691,8.91858026097513,12.8086829152278,5.76578967694971,11.5014565221884,4.09355042435354,0,0.505157755894224,0,0.482443521363367,13.6717360723287,0,0,0.169745085775188,0,0.502518772325447,1.19021820443007,1.75620283072019,3.15270288212382,1.99318220683897,2.23236676120482,5.73521601505083,8.28887912956299,3.7608755231193,0,0,1.96705709207614,3.58717770196152,0,0,0,1.51482556322624,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.712262414669021,0.162886959353576,0.164970122972535,2.65490276679926,0.242780636154981,0,0.754420319023592,0.295301892880773,0,0.516856586336442,0,0.356497378384721,1.8962205476149,0,0,0,0,0,0,0,0,0.164549020602121,0,0.23467170806371,0,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0,0.874442509889552,0.556275906031529,24.7762777156886,12.5895989457566,33.8905985086572,13.1857919903284,13.8061169998235,13.7266903923914,18.6976272993241,21.692475110167,16.7221968303353,0.954670618015114,0.158167996790568,0.609958401380546,0.216010681643603,0.836353184057875,0.218362563746178,0.134864346384821,0.578574190077352,0,0.129614973291793,3.72803587852155,0,0.149516546043979,0,0.194451188344048,0.516639293910924,0.337912250981556,0.938857909166032,0.2604087696879,0,0,0,42.0294790435477,9.73081033392788,21.1584571759544,23.1259064900475,17.7236428710807,14.9011016085949,17.4283401803955,21.8580500218374,24.2319479875554,20.57583779685,18.350365694905,26.6060014419524,27.5165867091342,26.8816875017609,0,0,0,0,0.19318959403219,0.750729901804728,0.915758121336325,1.2862102744744,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.729320151204882,0.209613162627982,0.551530525350042,0.888986911206461,0.412070114477788,0.962757628775446,1.01078884705519,0.25347929989024,0.943131706930381,0.749132059759059,0.640251524048693,0.746661096422973,0.952587382566147,0.695305955669133,0.578727661391115,1.23625770240992,1.03039244094078,2.74295401908332,0.354951612318675,0,1.45346416632329,1.03520318456864,0.930760686808441,0.365855945745545,0.263069711437843,0.407412341537585,0,1.18635018124174,0.886540341380071,1.22769312950907,0.619747364743864,1.54325288784913,0.499621155875892,1.40358965067245,2.36358159453128,1.3390183244819,7.0589254118245,3.94175320554716 | |phase1_expression=0,0,0,0,0,0,0,75.6662675367637,9.43284438416167,8.66038747391376,4.10923123741212,2.55270908785077,94.1604014621632,88.9939696625394,10.3264026162855,13.3633676477285,5.59649502502517,52.3667194494675,56.4911466455644,30.1316652776601,1.36069264241712,0.0992909512008853,0,0.799962113967033,1.60586496747019,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,336.917962743211,189.864488719284,314.637770128253,378.821078291973,392.751153851106,343.255819593026,0,0,0,0,0,0,0,0,0,39.428912423568,71.0854899171118,94.7784513581748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,2.58127163094416,0,0,0,0,6.74133216632409,0,0,0,0,0,0,0,0,0,0,4.68153906848146,95.5480790658064,0.593768556259299,0.520455980298408,0.608930956624282,0.691846491768175,0.60289056221049,0.470354828542819,0.251333182659351,0,2.02439099687876,61.9227386364912,3.39710384889559,11.0420759230197,8.24287930329878,0,0,0.209446706813455,0,28.1565542588913,33.5945529356308,29.2261522268049,0,0.457500602818626,0,0,0,0,0,0.305518091550949,22.2688477392066,0,0,0,0,0.180062129805349,0,0.204109497453984,0,0,0,0,0,0,0,0,1.0447564995665,0.411564272815887,0.199034266818493,54.7726286104323,30.8817488537658,32.6788024304931,0,0.234526059981096,0,0,0.393528463494808,0.154267112887378,0,0,0.583826711835847,0,0.164167464079095,0.486412857275134,0.292399974850665,0,0.402619256281115,0,0,0.330418782983798,0.264450566663544,0,0,0.257734922644187,0.201683524623343,0.22237804384487,0.190225626112559,0.474529061544512,0.329397909448022,0.251335208800269,0.198956472041151,0.38992817423824,0.898819408654221,0,0.398282546508734,0,0.114248512609729,0,0,0,0.350679099451593,0.0632365371242573,0.295220295959204,0,0,0,0.333690211432188,1.76903095601883,2.69834534861824,7.1001042485976,5.54707467430559,6.62027214631691,8.91858026097513,12.8086829152278,5.76578967694971,11.5014565221884,4.09355042435354,0,0.505157755894224,0,0.482443521363367,13.6717360723287,0,0,0.169745085775188,0,0.502518772325447,1.19021820443007,1.75620283072019,3.15270288212382,1.99318220683897,2.23236676120482,5.73521601505083,8.28887912956299,3.7608755231193,0,0,1.96705709207614,3.58717770196152,0,0,0,1.51482556322624,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.712262414669021,0.162886959353576,0.164970122972535,2.65490276679926,0.242780636154981,0,0.754420319023592,0.295301892880773,0,0.516856586336442,0,0.356497378384721,1.8962205476149,0,0,0,0,0,0,0,0,0.164549020602121,0,0.23467170806371,0,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0,0.874442509889552,0.556275906031529,24.7762777156886,12.5895989457566,33.8905985086572,13.1857919903284,13.8061169998235,13.7266903923914,18.6976272993241,21.692475110167,16.7221968303353,0.954670618015114,0.158167996790568,0.609958401380546,0.216010681643603,0.836353184057875,0.218362563746178,0.134864346384821,0.578574190077352,0,0.129614973291793,3.72803587852155,0,0.149516546043979,0,0.194451188344048,0.516639293910924,0.337912250981556,0.938857909166032,0.2604087696879,0,0,0,42.0294790435477,9.73081033392788,21.1584571759544,23.1259064900475,17.7236428710807,14.9011016085949,17.4283401803955,21.8580500218374,24.2319479875554,20.57583779685,18.350365694905,26.6060014419524,27.5165867091342,26.8816875017609,0,0,0,0,0.19318959403219,0.750729901804728,0.915758121336325,1.2862102744744,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.729320151204882,0.209613162627982,0.551530525350042,0.888986911206461,0.412070114477788,0.962757628775446,1.01078884705519,0.25347929989024,0.943131706930381,0.749132059759059,0.640251524048693,0.746661096422973,0.952587382566147,0.695305955669133,0.578727661391115,1.23625770240992,1.03039244094078,2.74295401908332,0.354951612318675,0,1.45346416632329,1.03520318456864,0.930760686808441,0.365855945745545,0.263069711437843,0.407412341537585,0,1.18635018124174,0.886540341380071,1.22769312950907,0.619747364743864,1.54325288784913,0.499621155875892,1.40358965067245,2.36358159453128,1.3390183244819,7.0589254118245,3.94175320554716 | ||
|short_description=p2@Sell | |||
}} | }} |
Latest revision as of 16:44, 26 September 2015
Short description: | p2@Sell |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sell_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 53bp_to_ENSMUST00000027871, ENSMUST00000097491, ENSMUST00000167117, NM_001164059, NM_011346, uc007dhy.2, uc011wuv.1_5end |
EntrezGene: | Sell |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.23e-11 | 32 |
hematopoietic oligopotent progenitor cell | 3.23e-11 | 32 |
hematopoietic stem cell | 3.23e-11 | 32 |
hematopoietic multipotent progenitor cell | 3.23e-11 | 32 |
mature alpha-beta T cell | 1.27e-08 | 9 |
alpha-beta T cell | 1.27e-08 | 9 |
immature T cell | 1.27e-08 | 9 |
mature T cell | 1.27e-08 | 9 |
immature alpha-beta T cell | 1.27e-08 | 9 |
CD4-positive, alpha-beta T cell | 1.39e-07 | 8 |
lymphoid lineage restricted progenitor cell | 1.81e-07 | 12 |
hematopoietic lineage restricted progenitor cell | 3.18e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 6.36e-21 | 48 |
immune system | 6.36e-21 | 48 |
hematopoietic system | 3.24e-20 | 45 |
blood island | 3.24e-20 | 45 |
hemopoietic organ | 2.30e-18 | 29 |
immune organ | 2.30e-18 | 29 |
mixed endoderm/mesoderm-derived structure | 1.21e-14 | 35 |
gland of gut | 3.35e-14 | 24 |
thymus | 1.05e-13 | 23 |
neck | 1.05e-13 | 23 |
respiratory system epithelium | 1.05e-13 | 23 |
hemolymphoid system gland | 1.05e-13 | 23 |
pharyngeal epithelium | 1.05e-13 | 23 |
thymic region | 1.05e-13 | 23 |
pharyngeal gland | 1.05e-13 | 23 |
entire pharyngeal arch endoderm | 1.05e-13 | 23 |
thymus primordium | 1.05e-13 | 23 |
early pharyngeal endoderm | 1.05e-13 | 23 |
foregut | 3.46e-13 | 80 |
pharynx | 7.60e-13 | 24 |
upper respiratory tract | 7.60e-13 | 24 |
chordate pharynx | 7.60e-13 | 24 |
pharyngeal arch system | 7.60e-13 | 24 |
pharyngeal region of foregut | 7.60e-13 | 24 |
respiratory system | 1.58e-12 | 42 |
respiratory tract | 4.80e-12 | 41 |
segment of respiratory tract | 1.15e-10 | 27 |
endo-epithelium | 1.45e-10 | 69 |
lateral plate mesoderm | 8.47e-10 | 87 |
gut epithelium | 1.58e-08 | 55 |
unilaminar epithelium | 3.88e-08 | 66 |
gland | 1.28e-07 | 65 |
craniocervical region | 3.26e-07 | 36 |
endocrine gland | 4.33e-07 | 60 |