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(Created page with "{{f5samples |id=FF:10452-106G2 |name=cord blood derived cell line:COBL-a 24h infection(-C), biol_rep1 |sample_id=10452 |rna_tube_id=106G2 |rna_box=106 |rna_position=G2 ...")
 
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{{f5samples
{{f5samples
|id=FF:10452-106G2
|DRA_sample_Accession=CAGE@SAMD00005051
|name=cord blood derived cell line:COBL-a 24h infection(-C), biol_rep1
|accession_numbers=CAGE;DRX007864;DRR008736;DRZ000161;DRZ001546;DRZ011511;DRZ012896
|sample_id=10452
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0000178,UBERON:0002331,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000179,UBERON:0000463,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000478,UBERON:0010317,UBERON:0002390,UBERON:0004535,UBERON:0002193,UBERON:0001009
|rna_tube_id=106G2
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0002371,CL:0000081,CL:0000255,CL:0000080
|rna_box=106
|rna_position=G2
|sample_cell_lot=
|sample_cell_catalog=
|sample_company=
|rna_lot_number=
|rna_catalog_number=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=blood
|sample_donor(cell lot)=
|sample_sex=
|sample_age=
|sample_ethnicity=
|rna_rin=8.30000
|rna_od260/230=1.04000
|rna_od260/280=2.03000
|sample_cell_type=unclassifiable
|sample_cell_line=COBL-a
|sample_collaboration=Chieko Kai (University of Tokyo)
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_weight_ug=11.14075
|rna_concentration=0.44563
|sample_note=
|profile_hcage=CNhs11049,LSID722,release008,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000081,CL:0000144,CL:0000255,CL:0000548,CL:0000988,CL:0002371
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000087,UBERON:0000091,UBERON:0000178,UBERON:0000179,UBERON:0000358,UBERON:0000463,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000478,UBERON:0000480,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0001009,UBERON:0001062,UBERON:0002050,UBERON:0002193,UBERON:0002331,UBERON:0002390,UBERON:0002532,UBERON:0003081,UBERON:0004120,UBERON:0004535,UBERON:0005423,UBERON:0005728,UBERON:0007806,UBERON:0008780
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0000625,FF:0101035,FF:0104053
 
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr6:391743..391759,+!p1@IRF4!2.69!485.11!IRF4;;chr3:189349162..189349207,+!p2@TP63!2.43!268.35!TP63;;chr10:64576105..64576133,-!p1@EGR2!2.20!312.53!EGR2;;chr8:11561684..11561751,+!p1@GATA4!2.15!140.25!GATA4;;chr11:129245736..129245758,+!p2@BARX2!2.13!135.21!BARX2;;chr2:231090471..231090504,+!p2@SP140!2.10!126.32!SP140;;chr13:28494130..28494168,+!p1@PDX1!2.09!122.17!PDX1;;chr14:75988831..75988847,+!p2@BATF!2.09!120.68!BATF;;chr12:103351444..103351461,+!p1@ASCL1!2.07!117.42!ASCL1;;chr17:38020392..38020477,-!p1@IKZF3!2.05!112.08!IKZF3;;chr3:101546827..101546847,+!p2@NFKBIZ!2.04!151.52!NFKBIZ;;chr19:36204309..36204335,+!p1@ZBTB32!1.96!89.25!ZBTB32;;chr9:77112244..77112262,+!p1@RORB!1.95!98.15!RORB;;chr14:75988771..75988826,+!p1@BATF!1.93!110.60!BATF;;chr18:55102598..55102623,+!p1@ONECUT2!1.93!83.92!ONECUT2;;chr17:46703687..46703740,-!p1@HOXB9!1.91!80.95!HOXB9;;chr17:45810594..45810608,+!p1@TBX21!1.90!77.69!TBX21;;chr1:212873084..212873137,-!p2@BATF3!1.85!69.68!BATF3;;chr6:135502408..135502459,+!p2@MYB!1.84!78.28!MYB;;chr12:48276548..48276564,-!p3@VDR!1.84!67.90!VDR;;chr6:91006518..91006570,-!p1@BACH2!1.80!137.59!BACH2;;chr6:135502501..135502546,+!p1@MYB!1.77!68.79!MYB;;chr6:137815524..137815537,-!p1@OLIG3!1.77!57.82!OLIG3;;chr2:61108878..61108891,+!p5@REL!1.77!57.53!REL;;chr10:64576035..64576046,-!p2@EGR2!1.76!56.64!EGR2;;chr15:60884706..60884743,-!p1@RORA!1.75!274.28!RORA;;chr11:31832658..31832681,-!p1@PAX6!1.74!53.37!PAX6;;chr2:157189180..157189290,-!p1@NR4A2!1.73!259.16!NR4A2;;chr12:52445218..52445237,+!p1@NR4A1!1.72!617.06!NR4A1;;chr2:61108808..61108821,+!p3@REL!1.68!59.01!REL;;chr11:129245526..129245553,+!p1@BARX2!1.68!46.85!BARX2;;chr1:212873162..212873188,-!p3@BATF3!1.68!46.85!BATF3;;chr3:111314186..111314204,-!p1@ZBED2!1.67!46.26!ZBED2;;chr2:231090433..231090469,+!p1@SP140!1.64!42.70!SP140;;chr3:141087339..141087387,+!p2@ZBTB38!1.60!382.22!ZBTB38;;chr3:141087393..141087426,+!p3@ZBTB38!1.58!141.14!ZBTB38;;chr2:73520667..73520683,-!p1@EGR4!1.56!34.99!EGR4;;chr2:176969228..176969260,+!p1@HOXD11!1.54!33.80!HOXD11;;chr19:19976683..19976709,+!p1@ZNF253!1.53!139.07!ZNF253;;chr10:104155659..104155676,+!p4@NFKB2!1.53!40.92!NFKB2;;chr1:212782094..212782109,+!p1@ATF3!1.51!805.94!ATF3;;chr2:185463247..185463263,+!p1@ZNF804A!1.51!54.86!ZNF804A;;chr12:103352277..103352324,+!p2@ASCL1!1.51!31.13!ASCL1;;chr20:50159198..50159299,-!p1@NFATC2!1.50!44.48!NFATC2;;chr19:12203100..12203132,+!p1@ZNF788!1.49!59.90!ZNF788;;chr8:22550982..22550999,-!p1@EGR3!1.48!80.36!EGR3;;chr18:55102628..55102646,+!p2@ONECUT2!1.48!29.36!ONECUT2;;chr17:46703436..46703460,-!p7@HOXB9!1.46!28.17!HOXB9;;chr1:212873061..212873080,-!p4@BATF3!1.46!27.87!BATF3;;chr2:61108695..61108753,+!p1@REL!1.45!181.47!REL;;chr6:106546808..106546833,+!p3@PRDM1!1.45!34.40!PRDM1;;chr17:40440359..40440386,+!p4@STAT5A!1.43!26.09!STAT5A;;chr1:25291475..25291511,-!p2@RUNX3!1.43!25.80!RUNX3;;chr4:26322267..26322334,+!p3@RBPJ!1.41!59.01!RBPJ;;chr17:40441354..40441410,+!p2@STAT5A!1.40!24.31!STAT5A;;chr4:144435112..144435176,+!p3@SMARCA5!1.39!47.44!SMARCA5;;chr2:61108771..61108789,+!p4@REL!1.39!35.29!REL;;chr4:57522513..57522548,-!p4@HOPX!1.39!23.43!HOPX;;chr1:3569072..3569093,+!p1@TP73!1.39!23.43!TP73;;chr20:51588873..51588953,+!p1@TSHZ2!1.37!29.36!TSHZ2;;chr13:28494109..28494122,+!p2@PDX1!1.37!22.54!PDX1;;chr3:181429704..181429722,+!p1@SOX2!1.37!22.24!SOX2;;chr12:19593515..19593573,+!p9@AEBP2!1.36!29.65!AEBP2;;chr1:27023752..27023799,+!p4@ARID1A!1.35!27.87!ARID1A;;chr19:19976714..19976729,+!p3@ZNF253!1.34!38.84!ZNF253;;chr1:212873267..212873332,-!p1@BATF3!1.34!28.17!BATF3;;chr3:181429741..181429767,+!p2@SOX2!1.34!20.76!SOX2;;chr6:126102292..126102329,+!p3@NCOA7!1.33!65.83!NCOA7;;chr19:12444440..12444455,-!p1@ZNF563!1.33!35.29!ZNF563;;chr17:8027418..8027432,-!p1@HES7!1.33!20.46!HES7;;chr16:31885093..31885165,+!p1@ZNF267!1.31!290.29!ZNF267;;chr19:45252008..45252024,+!p2@BCL3!1.31!63.46!BCL3;;chr1:6684918..6684936,+!p2@THAP3!1.31!23.43!THAP3;;chr17:40440446..40440464,+!p5@STAT5A!1.31!19.57!STAT5A;;chr2:45168875..45168916,+!p1@SIX3!1.31!19.57!SIX3;;chr3:141087562..141087594,+!p12@ZBTB38!1.31!19.57!ZBTB38;;chrY:2803415..2803468,+!p1@ZFY!1.31!19.57!ZFY;;chr4:57522476..57522500,-!p7@HOPX!1.29!18.38!HOPX;;chr2:145274981..145274994,-!p9@ZEB2!1.28!26.39!ZEB2;;chr2:192015701..192015743,-!p1@STAT4!1.28!24.91!STAT4;;chr10:8096772..8096787,+!p2@GATA3!1.28!21.05!GATA3;;chr20:6748325..6748352,+!p1@BMP2!1.27!25.50!BMP2;;chr7:50344289..50344323,+!p1@IKZF1!1.27!17.79!IKZF1;;chr6:135502472..135502489,+!p3@MYB!1.27!17.49!MYB;;chr13:28494180..28494196,+!p3@PDX1!1.27!17.49!PDX1;;chr6:144385698..144385742,-!p2@PLAGL1!1.25!20.16!PLAGL1;;chr1:212873200..212873230,-!p5@BATF3!1.25!16.90!BATF3;;chr14:35873947..35873965,-!p1@NFKBIA!1.24!999.87!NFKBIA;;chr10:104155480..104155534,+!p2@NFKB2!1.23!101.41!NFKB2;;chr1:214161272..214161322,+!p1@PROX1!1.23!22.54!PROX1;;chr4:26324474..26324501,+!p16@RBPJ!1.23!16.01!RBPJ;;chr6:36355360..36355392,-!p4@ETV7!1.22!15.72!ETV7;;chr2:14527490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|fonse_cell_line=FF:0101035
|fonse_cell_line=FF:0101035
|fonse_cell_line_closure=FF:0101035
|fonse_cell_line_closure=FF:0101035
Line 67: Line 39:
|fonse_treatment=FF:0000625,FF:10452-106G2
|fonse_treatment=FF:0000625,FF:10452-106G2
|fonse_treatment_closure=FF:0000625,FF:10452-106G2
|fonse_treatment_closure=FF:0000625,FF:10452-106G2
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/cord%2520blood%2520derived%2520cell%2520line%253aCOBL-a%252024h%2520infection%2528-C%2529.CNhs11049.10452-106G2.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/cord%2520blood%2520derived%2520cell%2520line%253aCOBL-a%252024h%2520infection%2528-C%2529.CNhs11049.10452-106G2.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/cord%2520blood%2520derived%2520cell%2520line%253aCOBL-a%252024h%2520infection%2528-C%2529.CNhs11049.10452-106G2.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/cord%2520blood%2520derived%2520cell%2520line%253aCOBL-a%252024h%2520infection%2528-C%2529.CNhs11049.10452-106G2.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/cord%2520blood%2520derived%2520cell%2520line%253aCOBL-a%252024h%2520infection%2528-C%2529.CNhs11049.10452-106G2.hg38.nobarcode.ctss.bed.gz
|id=FF:10452-106G2
|is_a=CL:0000081;;EFO:0002091;;FF:0000210;;FF:0000625;;FF:0104053
|is_obsolete=
|library_id=CNhs11049
|library_id_phase_based=2:CNhs11049
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10452
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10452
|name=cord blood derived cell line:COBL-a 24h infection(-C)
|namespace=FANTOM5
|part_of=
|profile_cagescan=,,,
|profile_hcage=CNhs11049,LSID722,release008,COMPLETED
|profile_rnaseq=
|profile_srnaseq=,,,
|refex=http://refex.dbcls.jp/genelist.php?lang
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|rna_box=106
|rna_catalog_number=
|rna_concentration=0.44563
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_lot_number=
|rna_od260/230=1.04
|rna_od260/280=2.03
|rna_position=G2
|rna_rin=8.3
|rna_sample_type=total RNA
|rna_tube_id=106G2
|rna_weight_ug=11.14075
|sample_age=
|sample_category=cell lines
|sample_cell_catalog=
|sample_cell_line=COBL-a
|sample_cell_lot=
|sample_cell_type=unclassifiable
|sample_collaboration=Chieko Kai (University of Tokyo)
|sample_company=
|sample_description=
|sample_dev_stage=
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;4.06115141042651e-271!GO:0043227;membrane-bound organelle;6.97224314185328e-235!GO:0043226;organelle;1.81659517821432e-234!GO:0043231;intracellular membrane-bound organelle;2.56978725924351e-234!GO:0043229;intracellular organelle;1.04308900399563e-233!GO:0044422;organelle part;2.14461267061291e-150!GO:0044446;intracellular organelle part;3.39036672926845e-148!GO:0005737;cytoplasm;7.69887466193903e-143!GO:0005634;nucleus;1.28329898741518e-140!GO:0043170;macromolecule metabolic process;1.18660603638134e-117!GO:0044237;cellular metabolic process;8.29051916152903e-117!GO:0032991;macromolecular complex;9.95134777008563e-117!GO:0044238;primary metabolic process;1.2723993561375e-115!GO:0044428;nuclear part;2.76091327054084e-97!GO:0030529;ribonucleoprotein complex;4.45865641418903e-95!GO:0044444;cytoplasmic part;2.08697916975826e-91!GO:0003723;RNA binding;1.99888270827176e-90!GO:0043233;organelle lumen;1.81901394768092e-89!GO:0031974;membrane-enclosed lumen;1.81901394768092e-89!GO:0043283;biopolymer metabolic process;4.35490423742891e-89!GO:0010467;gene expression;5.11587712051243e-81!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;8.20244787570689e-80!GO:0005515;protein binding;1.52299337664755e-77!GO:0003676;nucleic acid binding;1.16681555208443e-65!GO:0006396;RNA processing;1.31726948716815e-65!GO:0031981;nuclear lumen;1.01834857725608e-61!GO:0006412;translation;1.19593934977771e-60!GO:0043234;protein complex;3.93523446630276e-60!GO:0005739;mitochondrion;4.05210937149484e-54!GO:0016071;mRNA metabolic process;2.33462163015629e-53!GO:0005840;ribosome;3.39533147558449e-50!GO:0016070;RNA metabolic process;3.95278880072679e-49!GO:0006259;DNA metabolic process;2.16072102722296e-48!GO:0019538;protein metabolic process;2.51727696593488e-48!GO:0016043;cellular component organization and biogenesis;3.50754977736627e-46!GO:0008380;RNA splicing;5.90890461114632e-45!GO:0044267;cellular protein metabolic process;3.28613903716352e-44!GO:0006397;mRNA processing;4.79113452896388e-44!GO:0006996;organelle organization and biogenesis;1.54014831709028e-43!GO:0003735;structural constituent of ribosome;2.00673615224806e-43!GO:0033036;macromolecule localization;5.09166799948008e-43!GO:0044260;cellular macromolecule metabolic process;1.02853590568461e-42!GO:0015031;protein transport;4.24090525470303e-41!GO:0044249;cellular biosynthetic process;4.56064767863145e-40!GO:0005654;nucleoplasm;6.21410950831213e-40!GO:0009059;macromolecule biosynthetic process;9.82452988891394e-40!GO:0043228;non-membrane-bound organelle;1.27822296732412e-38!GO:0043232;intracellular non-membrane-bound organelle;1.27822296732412e-38!GO:0033279;ribosomal subunit;5.18366174295037e-38!GO:0008104;protein localization;5.2941976692303e-38!GO:0045184;establishment of protein localization;7.53513398160535e-38!GO:0046907;intracellular transport;2.24504380677877e-37!GO:0007049;cell cycle;2.90423431328937e-37!GO:0009058;biosynthetic process;1.88932302982307e-36!GO:0031090;organelle membrane;5.55192594315454e-36!GO:0044429;mitochondrial part;7.60823726632746e-36!GO:0000166;nucleotide binding;1.12563027671722e-35!GO:0031967;organelle envelope;9.75629998513251e-35!GO:0031975;envelope;1.52423558701501e-34!GO:0022613;ribonucleoprotein complex biogenesis and assembly;8.42525767847287e-34!GO:0065003;macromolecular complex assembly;3.87713464047467e-33!GO:0005681;spliceosome;1.4782137268732e-32!GO:0005829;cytosol;1.93823309061099e-32!GO:0022402;cell cycle process;4.16302801134816e-31!GO:0006974;response to DNA damage stimulus;1.27125832973818e-30!GO:0044451;nucleoplasm part;6.37312673602933e-30!GO:0006886;intracellular protein transport;1.07465107177704e-29!GO:0022607;cellular component assembly;1.01174279208692e-28!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.1499585048798e-27!GO:0006281;DNA repair;3.04025134873311e-27!GO:0000278;mitotic cell cycle;3.04025134873311e-27!GO:0051649;establishment of cellular localization;6.97095883215401e-27!GO:0051641;cellular localization;2.5453985308884e-26!GO:0005694;chromosome;5.0024016660081e-26!GO:0032553;ribonucleotide binding;3.12366392054603e-25!GO:0032555;purine ribonucleotide binding;3.12366392054603e-25!GO:0017076;purine nucleotide binding;3.09792366801279e-24!GO:0005524;ATP binding;1.80153515364793e-23!GO:0016874;ligase activity;3.70118521013317e-23!GO:0044445;cytosolic part;4.70666396836538e-23!GO:0032559;adenyl ribonucleotide binding;5.90759312968416e-23!GO:0006366;transcription from RNA polymerase II promoter;9.05396856342735e-23!GO:0044427;chromosomal part;1.61681890149871e-22!GO:0051276;chromosome organization and biogenesis;1.63654759578933e-22!GO:0005730;nucleolus;1.9587153198213e-22!GO:0008134;transcription factor binding;1.99240193991634e-22!GO:0006512;ubiquitin cycle;2.54124400043929e-22!GO:0017111;nucleoside-triphosphatase activity;4.100271489959e-22!GO:0019866;organelle inner membrane;7.68134901748104e-22!GO:0030554;adenyl nucleotide binding;8.59290289391507e-22!GO:0016462;pyrophosphatase activity;1.52193074218116e-21!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.78579264026165e-21!GO:0000087;M phase of mitotic cell cycle;2.6068898451437e-21!GO:0016817;hydrolase activity, acting on acid anhydrides;3.01740659353388e-21!GO:0022403;cell cycle phase;6.72252341932044e-21!GO:0007067;mitosis;9.36224620752019e-21!GO:0009719;response to endogenous stimulus;1.33686537582548e-20!GO:0015935;small ribosomal subunit;2.03513771935622e-20!GO:0006457;protein folding;4.17119388912992e-20!GO:0005740;mitochondrial envelope;7.63588377146936e-20!GO:0031980;mitochondrial lumen;7.87358060520018e-20!GO:0005759;mitochondrial matrix;7.87358060520018e-20!GO:0005743;mitochondrial inner membrane;3.63012672806848e-19!GO:0022618;protein-RNA complex assembly;4.99391135399342e-19!GO:0031966;mitochondrial membrane;5.65028230903587e-19!GO:0015934;large ribosomal subunit;2.4700170278254e-18!GO:0050794;regulation of cellular process;4.46023130167498e-18!GO:0012501;programmed cell death;6.40423103522979e-18!GO:0006915;apoptosis;6.60216786203753e-18!GO:0008135;translation factor activity, nucleic acid binding;7.5298675641497e-18!GO:0006260;DNA replication;8.11465014714495e-18!GO:0000279;M phase;8.35495017091403e-18!GO:0006325;establishment and/or maintenance of chromatin architecture;9.63079508703736e-18!GO:0012505;endomembrane system;1.87754393375096e-17!GO:0044265;cellular macromolecule catabolic process;2.41544563793586e-17!GO:0006119;oxidative phosphorylation;2.41544563793586e-17!GO:0019941;modification-dependent protein catabolic process;2.47390845091458e-17!GO:0043632;modification-dependent macromolecule catabolic process;2.47390845091458e-17!GO:0051301;cell division;2.82240306541088e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;3.65962777297656e-17!GO:0051726;regulation of cell cycle;3.7906543370111e-17!GO:0000074;regulation of progression through cell cycle;4.02785058899306e-17!GO:0006323;DNA packaging;4.76758725590754e-17!GO:0043412;biopolymer modification;5.04307740871565e-17!GO:0006511;ubiquitin-dependent protein catabolic process;6.1090028483115e-17!GO:0042623;ATPase activity, coupled;7.40809190569863e-17!GO:0008219;cell death;7.70271261416958e-17!GO:0016265;death;7.70271261416958e-17!GO:0019222;regulation of metabolic process;8.37413084770306e-17!GO:0044257;cellular protein catabolic process;1.20186231684788e-16!GO:0016887;ATPase activity;1.43378214221767e-16!GO:0016604;nuclear body;1.53071421628043e-16!GO:0004386;helicase activity;1.65413318956225e-16!GO:0005635;nuclear envelope;2.98548073938551e-16!GO:0006605;protein targeting;3.320677471645e-16!GO:0044455;mitochondrial membrane part;4.12807660777016e-16!GO:0000502;proteasome complex (sensu Eukaryota);1.25823447540017e-15!GO:0006913;nucleocytoplasmic transport;2.16403565828189e-15!GO:0043285;biopolymer catabolic process;2.69368749119474e-15!GO:0051169;nuclear transport;3.02023771583057e-15!GO:0044453;nuclear membrane part;3.18056552015111e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);4.0493282484326e-15!GO:0042254;ribosome biogenesis and assembly;4.0493282484326e-15!GO:0000398;nuclear mRNA splicing, via spliceosome;4.41064034950888e-15!GO:0000375;RNA splicing, via transesterification reactions;4.41064034950888e-15!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;4.41064034950888e-15!GO:0031323;regulation of cellular metabolic process;8.54761889838314e-15!GO:0005761;mitochondrial ribosome;8.96686641033443e-15!GO:0000313;organellar ribosome;8.96686641033443e-15!GO:0051082;unfolded protein binding;1.31060631303633e-14!GO:0006333;chromatin assembly or disassembly;1.31507411803769e-14!GO:0003712;transcription cofactor activity;2.10070417399367e-14!GO:0031965;nuclear membrane;2.12035565030333e-14!GO:0048523;negative regulation of cellular process;3.79135695045486e-14!GO:0050657;nucleic acid transport;4.02958786526633e-14!GO:0051236;establishment of RNA localization;4.02958786526633e-14!GO:0050658;RNA transport;4.02958786526633e-14!GO:0006464;protein modification process;4.34869754031361e-14!GO:0006350;transcription;4.97489994397324e-14!GO:0000785;chromatin;5.62954041046907e-14!GO:0006403;RNA localization;6.26500571647015e-14!GO:0043687;post-translational protein modification;6.58206844930778e-14!GO:0016607;nuclear speck;1.0262610107241e-13!GO:0005643;nuclear pore;3.59405130145417e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);3.66413554537347e-13!GO:0006357;regulation of transcription from RNA polymerase II promoter;3.91015071923647e-13!GO:0003677;DNA binding;3.98161063041234e-13!GO:0008026;ATP-dependent helicase activity;4.2069070168564e-13!GO:0010468;regulation of gene expression;4.39497071955284e-13!GO:0006399;tRNA metabolic process;4.87535221198998e-13!GO:0003743;translation initiation factor activity;5.93923053850765e-13!GO:0009057;macromolecule catabolic process;7.3203154914001e-13!GO:0016563;transcription activator activity;1.23357046717023e-12!GO:0005746;mitochondrial respiratory chain;1.79928817377647e-12!GO:0050789;regulation of biological process;1.84426602661111e-12!GO:0065004;protein-DNA complex assembly;2.18539016362064e-12!GO:0048519;negative regulation of biological process;2.30781124618246e-12!GO:0065002;intracellular protein transport across a membrane;3.15481722312802e-12!GO:0030163;protein catabolic process;3.71811157376121e-12!GO:0051028;mRNA transport;3.91251885389127e-12!GO:0006413;translational initiation;4.51647146585523e-12!GO:0031324;negative regulation of cellular metabolic process;4.98432111817107e-12!GO:0016564;transcription repressor activity;5.29699560391783e-12!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;5.70084336216829e-12!GO:0032774;RNA biosynthetic process;6.35364354694163e-12!GO:0042981;regulation of apoptosis;6.75506298833163e-12!GO:0015630;microtubule cytoskeleton;7.56416355490187e-12!GO:0006351;transcription, DNA-dependent;8.95789842020525e-12!GO:0006446;regulation of translational initiation;1.08228458382206e-11!GO:0043067;regulation of programmed cell death;1.09364263608195e-11!GO:0050136;NADH dehydrogenase (quinone) activity;1.30646776591536e-11!GO:0003954;NADH dehydrogenase activity;1.30646776591536e-11!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.30646776591536e-11!GO:0044432;endoplasmic reticulum part;1.90179542876901e-11!GO:0048193;Golgi vesicle transport;2.90069175353902e-11!GO:0044248;cellular catabolic process;3.11778411908515e-11!GO:0017038;protein import;3.58691220488335e-11!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;4.93141358622992e-11!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;5.35640085281545e-11!GO:0046930;pore complex;8.04452298113018e-11!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;8.23100403853793e-11!GO:0005783;endoplasmic reticulum;9.67819486492399e-11!GO:0042775;organelle ATP synthesis coupled electron transport;1.64369171664819e-10!GO:0042773;ATP synthesis coupled electron transport;1.64369171664819e-10!GO:0006334;nucleosome assembly;1.64369171664819e-10!GO:0006364;rRNA processing;1.81318301989233e-10!GO:0016072;rRNA metabolic process;1.95871697767926e-10!GO:0009892;negative regulation of metabolic process;2.90159191606675e-10!GO:0048770;pigment granule;3.42209843503039e-10!GO:0042470;melanosome;3.42209843503039e-10!GO:0045449;regulation of transcription;4.13378628755867e-10!GO:0031497;chromatin assembly;4.4165628093991e-10!GO:0030964;NADH dehydrogenase complex (quinone);4.99449087633656e-10!GO:0045271;respiratory chain complex I;4.99449087633656e-10!GO:0005747;mitochondrial respiratory chain complex I;4.99449087633656e-10!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;8.51177458298595e-10!GO:0004812;aminoacyl-tRNA ligase activity;8.51177458298595e-10!GO:0016875;ligase activity, forming carbon-oxygen bonds;8.51177458298595e-10!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;8.96163564141551e-10!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.10636743725827e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.12571656229671e-09!GO:0016481;negative regulation of transcription;1.32260672926344e-09!GO:0045941;positive regulation of transcription;1.46690200210723e-09!GO:0043566;structure-specific DNA binding;1.7835991177457e-09!GO:0006355;regulation of transcription, DNA-dependent;2.23753685608919e-09!GO:0016568;chromatin modification;2.40294087365505e-09!GO:0043038;amino acid activation;2.49768504341955e-09!GO:0006418;tRNA aminoacylation for protein translation;2.49768504341955e-09!GO:0043039;tRNA aminoacylation;2.49768504341955e-09!GO:0006261;DNA-dependent DNA replication;2.63653688102377e-09!GO:0008639;small protein conjugating enzyme activity;2.84875469515782e-09!GO:0006793;phosphorus metabolic process;3.26502824791809e-09!GO:0006796;phosphate metabolic process;3.26502824791809e-09!GO:0043069;negative regulation of programmed cell death;3.37323728077695e-09!GO:0043066;negative regulation of apoptosis;3.82258118846044e-09!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;4.1446522105813e-09!GO:0004842;ubiquitin-protein ligase activity;5.1137430839309e-09!GO:0006916;anti-apoptosis;5.93894143236674e-09!GO:0042175;nuclear envelope-endoplasmic reticulum network;7.03959941123462e-09!GO:0051246;regulation of protein metabolic process;9.57038070791702e-09!GO:0019787;small conjugating protein ligase activity;1.42918554248281e-08!GO:0008565;protein transporter activity;1.47659079408755e-08!GO:0005789;endoplasmic reticulum membrane;1.91912608170881e-08!GO:0005813;centrosome;2.17017247933707e-08!GO:0045893;positive regulation of transcription, DNA-dependent;2.49049248985553e-08!GO:0005794;Golgi apparatus;2.63648806417628e-08!GO:0051170;nuclear import;3.34979491470712e-08!GO:0051186;cofactor metabolic process;3.55409056775398e-08!GO:0006888;ER to Golgi vesicle-mediated transport;4.7148993506411e-08!GO:0006606;protein import into nucleus;4.84204190655389e-08!GO:0003697;single-stranded DNA binding;5.09045132537908e-08!GO:0045786;negative regulation of progression through cell cycle;5.91753659318223e-08!GO:0003702;RNA polymerase II transcription factor activity;5.97395070047139e-08!GO:0000775;chromosome, pericentric region;7.20582075560455e-08!GO:0016881;acid-amino acid ligase activity;7.49264715134428e-08!GO:0005815;microtubule organizing center;8.33127213073547e-08!GO:0005819;spindle;8.8651150304285e-08!GO:0030532;small nuclear ribonucleoprotein complex;1.09552377211797e-07!GO:0003713;transcription coactivator activity;1.09619840642652e-07!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.10506108038727e-07!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.12952777467021e-07!GO:0006732;coenzyme metabolic process;1.22276506770659e-07!GO:0048522;positive regulation of cellular process;1.28023579398454e-07!GO:0006461;protein complex assembly;1.96075471945989e-07!GO:0005667;transcription factor complex;1.97475016752874e-07!GO:0065007;biological regulation;2.17220537206897e-07!GO:0016310;phosphorylation;2.4928188528182e-07!GO:0003714;transcription corepressor activity;2.91369258069791e-07!GO:0009259;ribonucleotide metabolic process;3.2366979027453e-07!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;4.07823306954716e-07!GO:0031202;RNA splicing factor activity, transesterification mechanism;4.20446429805276e-07!GO:0051168;nuclear export;5.12561501708303e-07!GO:0006163;purine nucleotide metabolic process;5.70122945793094e-07!GO:0016192;vesicle-mediated transport;6.06291688445797e-07!GO:0051329;interphase of mitotic cell cycle;6.92791316243278e-07!GO:0009055;electron carrier activity;6.99863132549509e-07!GO:0051325;interphase;7.35353035272998e-07!GO:0005839;proteasome core complex (sensu Eukaryota);7.53257222623508e-07!GO:0006164;purine nucleotide biosynthetic process;9.35826538837815e-07!GO:0045892;negative regulation of transcription, DNA-dependent;1.00200672742815e-06!GO:0016363;nuclear matrix;1.0067217212017e-06!GO:0000245;spliceosome assembly;1.11204601013909e-06!GO:0019829;cation-transporting ATPase activity;1.35670688358871e-06!GO:0000075;cell cycle checkpoint;1.36002436175364e-06!GO:0006310;DNA recombination;1.45224626276373e-06!GO:0016779;nucleotidyltransferase activity;1.74692484058094e-06!GO:0004298;threonine endopeptidase activity;1.74720791070221e-06!GO:0006402;mRNA catabolic process;1.84405306217712e-06!GO:0005657;replication fork;1.96750452319991e-06!GO:0009260;ribonucleotide biosynthetic process;2.12515639288426e-06!GO:0032446;protein modification by small protein conjugation;2.16046162106096e-06!GO:0007051;spindle organization and biogenesis;2.19064366676172e-06!GO:0015986;ATP synthesis coupled proton transport;2.49204065336982e-06!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.49204065336982e-06!GO:0003682;chromatin binding;2.49846670749181e-06!GO:0019899;enzyme binding;2.85392563556259e-06!GO:0005793;ER-Golgi intermediate compartment;3.21012344607224e-06!GO:0007017;microtubule-based process;3.42524624755127e-06!GO:0009150;purine ribonucleotide metabolic process;3.48395555892026e-06!GO:0006401;RNA catabolic process;3.9265577847268e-06!GO:0003724;RNA helicase activity;4.05086672272415e-06!GO:0007010;cytoskeleton organization and biogenesis;4.18311309507669e-06!GO:0006417;regulation of translation;4.24624244853285e-06!GO:0015078;hydrogen ion transmembrane transporter activity;4.31831190189487e-06!GO:0016567;protein ubiquitination;4.31831190189487e-06!GO:0006302;double-strand break repair;4.35130499982684e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;4.58846407636173e-06!GO:0009893;positive regulation of metabolic process;4.64725152285679e-06!GO:0000786;nucleosome;4.697415475376e-06!GO:0006613;cotranslational protein targeting to membrane;5.05788239538709e-06!GO:0003690;double-stranded DNA binding;5.34651852650853e-06!GO:0051188;cofactor biosynthetic process;5.65196709049652e-06!GO:0009152;purine ribonucleotide biosynthetic process;5.84811779345348e-06!GO:0007005;mitochondrion organization and biogenesis;6.54293702719417e-06!GO:0016740;transferase activity;6.65826876341907e-06!GO:0045259;proton-transporting ATP synthase complex;7.00152939107525e-06!GO:0030120;vesicle coat;7.10248225725769e-06!GO:0030662;coated vesicle membrane;7.10248225725769e-06!GO:0048475;coated membrane;9.68177494075407e-06!GO:0030117;membrane coat;9.68177494075407e-06!GO:0031325;positive regulation of cellular metabolic process;1.04690233074679e-05!GO:0009060;aerobic respiration;1.05666047994546e-05!GO:0008094;DNA-dependent ATPase activity;1.27191535455966e-05!GO:0007243;protein kinase cascade;1.3655244042299e-05!GO:0007059;chromosome segregation;1.51752779345638e-05!GO:0009108;coenzyme biosynthetic process;1.76034672469431e-05!GO:0009142;nucleoside triphosphate biosynthetic process;2.07151110915785e-05!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.07151110915785e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;2.07316623919025e-05!GO:0015399;primary active transmembrane transporter activity;2.07316623919025e-05!GO:0006754;ATP biosynthetic process;2.18936831563512e-05!GO:0006753;nucleoside phosphate metabolic process;2.18936831563512e-05!GO:0000776;kinetochore;2.26893736870888e-05!GO:0006414;translational elongation;2.30726723149257e-05!GO:0009056;catabolic process;2.34289059946527e-05!GO:0009199;ribonucleoside triphosphate metabolic process;2.34310043937618e-05!GO:0016469;proton-transporting two-sector ATPase complex;2.60854079792646e-05!GO:0009141;nucleoside triphosphate metabolic process;2.70351639874907e-05!GO:0006752;group transfer coenzyme metabolic process;3.24005982278883e-05!GO:0005874;microtubule;3.40126149189103e-05!GO:0046034;ATP metabolic process;3.46369341155198e-05!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;3.52132735724161e-05!GO:0009145;purine nucleoside triphosphate biosynthetic process;3.52132735724161e-05!GO:0051427;hormone receptor binding;3.52132735724161e-05!GO:0045333;cellular respiration;3.55537017923641e-05!GO:0051789;response to protein stimulus;3.78809774569213e-05!GO:0006986;response to unfolded protein;3.78809774569213e-05!GO:0008033;tRNA processing;3.78809774569213e-05!GO:0009205;purine ribonucleoside triphosphate metabolic process;3.86558007785057e-05!GO:0009144;purine nucleoside triphosphate metabolic process;3.86558007785057e-05!GO:0003678;DNA helicase activity;4.07252080250384e-05!GO:0016787;hydrolase activity;4.25333122129836e-05!GO:0005762;mitochondrial large ribosomal subunit;4.32307317725348e-05!GO:0000315;organellar large ribosomal subunit;4.32307317725348e-05!GO:0031326;regulation of cellular biosynthetic process;5.1742159333315e-05!GO:0048518;positive regulation of biological process;5.42552817768377e-05!GO:0005768;endosome;5.51833454955081e-05!GO:0043021;ribonucleoprotein binding;5.58520139356959e-05!GO:0004527;exonuclease activity;5.83182302548076e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;6.32027970947235e-05!GO:0035257;nuclear hormone receptor binding;7.0282493239279e-05!GO:0016741;transferase activity, transferring one-carbon groups;7.05114445333617e-05!GO:0031072;heat shock protein binding;7.23010514780718e-05!GO:0003684;damaged DNA binding;7.92579305898404e-05!GO:0006099;tricarboxylic acid cycle;8.24384552592185e-05!GO:0046356;acetyl-CoA catabolic process;8.24384552592185e-05!GO:0006612;protein targeting to membrane;8.360350231486e-05!GO:0043623;cellular protein complex assembly;8.85129357212661e-05!GO:0007088;regulation of mitosis;9.07438558517186e-05!GO:0003899;DNA-directed RNA polymerase activity;9.28402549077242e-05!GO:0004674;protein serine/threonine kinase activity;9.61294527115024e-05!GO:0008168;methyltransferase activity;9.92421926094219e-05!GO:0048468;cell development;0.000102433144993604!GO:0008186;RNA-dependent ATPase activity;0.000102433144993604!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.000114646270611579!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000117741729747146!GO:0003729;mRNA binding;0.000121880038371735!GO:0044452;nucleolar part;0.000122944942905331!GO:0006084;acetyl-CoA metabolic process;0.000124647975741491!GO:0000049;tRNA binding;0.00014659143957331!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.000147663734619771!GO:0051052;regulation of DNA metabolic process;0.000155666990511217!GO:0005048;signal sequence binding;0.000162195559789055!GO:0000151;ubiquitin ligase complex;0.000162956571595121!GO:0005798;Golgi-associated vesicle;0.000166164485599239!GO:0000314;organellar small ribosomal subunit;0.000174554446109142!GO:0005763;mitochondrial small ribosomal subunit;0.000174554446109142!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000176065985599208!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.000233516567480411!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000248041928960969!GO:0043065;positive regulation of apoptosis;0.000271433040349675!GO:0016251;general RNA polymerase II transcription factor activity;0.00027540909394874!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.00029470139366581!GO:0004004;ATP-dependent RNA helicase activity;0.000319642457432257!GO:0006405;RNA export from nucleus;0.000320793940711206!GO:0043068;positive regulation of programmed cell death;0.000322511300684019!GO:0005788;endoplasmic reticulum lumen;0.000339897910535496!GO:0003924;GTPase activity;0.000340526685660685!GO:0006383;transcription from RNA polymerase III promoter;0.000340819699314492!GO:0030867;rough endoplasmic reticulum membrane;0.000354950215795822!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.0003598052497509!GO:0005525;GTP binding;0.000362613902047764!GO:0008654;phospholipid biosynthetic process;0.000369570110501988!GO:0005770;late endosome;0.000396015358683785!GO:0043492;ATPase activity, coupled to movement of substances;0.000433515925480215!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000454393905804726!GO:0048471;perinuclear region of cytoplasm;0.000470307615059078!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.000480659975699113!GO:0006891;intra-Golgi vesicle-mediated transport;0.000559373877193325!GO:0009889;regulation of biosynthetic process;0.000577911020849459!GO:0009109;coenzyme catabolic process;0.000595996266511761!GO:0043681;protein import into mitochondrion;0.00065665155304545!GO:0048500;signal recognition particle;0.000681682970188132!GO:0045454;cell redox homeostasis;0.000681716263864401!GO:0044431;Golgi apparatus part;0.000713405539059968!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.00071976528343249!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000720591646488393!GO:0051252;regulation of RNA metabolic process;0.000769964818917445!GO:0051087;chaperone binding;0.00079397915260589!GO:0008270;zinc ion binding;0.000797512848307324!GO:0007093;mitotic cell cycle checkpoint;0.000833955225610823!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000847785583676187!GO:0042802;identical protein binding;0.000880075834810773!GO:0000082;G1/S transition of mitotic cell cycle;0.000921635183509926!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000985540183269506!GO:0004518;nuclease activity;0.000989840924975823!GO:0005637;nuclear inner membrane;0.000996339485600543!GO:0045944;positive regulation of transcription from RNA polymerase II promoter;0.000997065902059119!GO:0008022;protein C-terminus binding;0.000999954013894861!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00101271104578928!GO:0008139;nuclear localization sequence binding;0.00113831761998132!GO:0030433;ER-associated protein catabolic process;0.00122461926954768!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.00122461926954768!GO:0006520;amino acid metabolic process;0.00122840396562233!GO:0030134;ER to Golgi transport vesicle;0.00125354253288262!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00128563383165438!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00131280337254735!GO:0016853;isomerase activity;0.00131282604124965!GO:0007006;mitochondrial membrane organization and biogenesis;0.00133649468538986!GO:0065009;regulation of a molecular function;0.00134754458235909!GO:0007052;mitotic spindle organization and biogenesis;0.00136631359499561!GO:0016859;cis-trans isomerase activity;0.00137888788971116!GO:0006289;nucleotide-excision repair;0.00141292628968673!GO:0030384;phosphoinositide metabolic process;0.00142179550651209!GO:0006626;protein targeting to mitochondrion;0.00157235739504077!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00158199075316881!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00158199075316881!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00158199075316881!GO:0006352;transcription initiation;0.00162955763586636!GO:0032259;methylation;0.00167300712410739!GO:0033673;negative regulation of kinase activity;0.00167753907808448!GO:0006469;negative regulation of protein kinase activity;0.00167753907808448!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00170920949266328!GO:0030127;COPII vesicle coat;0.00183428584534963!GO:0012507;ER to Golgi transport vesicle membrane;0.00183428584534963!GO:0005885;Arp2/3 protein complex;0.0018911025070357!GO:0031982;vesicle;0.00198332309411054!GO:0007346;regulation of progression through mitotic cell cycle;0.00198838102028227!GO:0006839;mitochondrial transport;0.00206431358533608!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00207281334893507!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00207702270660478!GO:0045047;protein targeting to ER;0.00207702270660478!GO:0042770;DNA damage response, signal transduction;0.00215060095293809!GO:0006611;protein export from nucleus;0.00221872514103192!GO:0008312;7S RNA binding;0.0022288601633081!GO:0000059;protein import into nucleus, docking;0.00225417304680284!GO:0032508;DNA duplex unwinding;0.00231322195038005!GO:0032392;DNA geometric change;0.00231322195038005!GO:0051348;negative regulation of transferase activity;0.00239713820810021!GO:0006275;regulation of DNA replication;0.00260221171250546!GO:0016584;nucleosome positioning;0.00280072164705701!GO:0032200;telomere organization and biogenesis;0.00295480046242353!GO:0000723;telomere maintenance;0.00295480046242353!GO:0031124;mRNA 3'-end processing;0.00298723301141288!GO:0005876;spindle microtubule;0.0030715673824531!GO:0046966;thyroid hormone receptor binding;0.00314916399793286!GO:0051920;peroxiredoxin activity;0.00316941267623592!GO:0003746;translation elongation factor activity;0.00316941267623592!GO:0030663;COPI coated vesicle membrane;0.0031893876755752!GO:0030126;COPI vesicle coat;0.0031893876755752!GO:0030137;COPI-coated vesicle;0.00325608541116518!GO:0031123;RNA 3'-end processing;0.00327233052766125!GO:0006917;induction of apoptosis;0.0034269237880404!GO:0046489;phosphoinositide biosynthetic process;0.00351118342796935!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.00358047257547714!GO:0015631;tubulin binding;0.00359613750270254!GO:0009117;nucleotide metabolic process;0.00359790868560538!GO:0032561;guanyl ribonucleotide binding;0.00363210552678782!GO:0019001;guanyl nucleotide binding;0.00363210552678782!GO:0005684;U2-dependent spliceosome;0.00377501365998102!GO:0012502;induction of programmed cell death;0.00397895204991009!GO:0031570;DNA integrity checkpoint;0.0039807280267242!GO:0046983;protein dimerization activity;0.0039807280267242!GO:0007050;cell cycle arrest;0.00409770471136766!GO:0006268;DNA unwinding during replication;0.00432107161674998!GO:0030658;transport vesicle membrane;0.00432668229863721!GO:0000287;magnesium ion binding;0.00437506864619635!GO:0045185;maintenance of protein localization;0.00442917838196782!GO:0000922;spindle pole;0.00462020031744334!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00482454486151185!GO:0019783;small conjugating protein-specific protease activity;0.00495923731629601!GO:0022415;viral reproductive process;0.00521133371227717!GO:0000819;sister chromatid segregation;0.00550520682453107!GO:0006650;glycerophospholipid metabolic process;0.00559602491435503!GO:0000096;sulfur amino acid metabolic process;0.00560741022765426!GO:0030880;RNA polymerase complex;0.00561382133507369!GO:0051187;cofactor catabolic process;0.00577852443780816!GO:0031410;cytoplasmic vesicle;0.00591088323102151!GO:0044440;endosomal part;0.00599387519592387!GO:0010008;endosome membrane;0.00599387519592387!GO:0004843;ubiquitin-specific protease activity;0.00599635053384477!GO:0006950;response to stress;0.00622365486747219!GO:0031988;membrane-bound vesicle;0.00633129020025691!GO:0030521;androgen receptor signaling pathway;0.00669799890713132!GO:0051053;negative regulation of DNA metabolic process;0.00669799890713132!GO:0019843;rRNA binding;0.00681648507075644!GO:0003711;transcription elongation regulator activity;0.0072397719047523!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00769876294029769!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00769876294029769!GO:0006284;base-excision repair;0.00773097319930073!GO:0031252;leading edge;0.00776949503107835!GO:0000725;recombinational repair;0.00776949503107835!GO:0000724;double-strand break repair via homologous recombination;0.00776949503107835!GO:0000077;DNA damage checkpoint;0.00795027515366653!GO:0045045;secretory pathway;0.0080195007320658!GO:0004532;exoribonuclease activity;0.00804599510002976!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.00804599510002976!GO:0032507;maintenance of cellular protein localization;0.00812044357257364!GO:0004221;ubiquitin thiolesterase activity;0.00812044357257364!GO:0005791;rough endoplasmic reticulum;0.00821287623735482!GO:0046914;transition metal ion binding;0.00828978871969068!GO:0000097;sulfur amino acid biosynthetic process;0.00845379422855277!GO:0030036;actin cytoskeleton organization and biogenesis;0.0085001196849166!GO:0051539;4 iron, 4 sulfur cluster binding;0.00852876537529136!GO:0040029;regulation of gene expression, epigenetic;0.00852876537529136!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0085480900770627!GO:0000428;DNA-directed RNA polymerase complex;0.0085480900770627!GO:0043488;regulation of mRNA stability;0.0085480900770627!GO:0043487;regulation of RNA stability;0.0085480900770627!GO:0000070;mitotic sister chromatid segregation;0.00873911668464543!GO:0000139;Golgi membrane;0.00894591177743581!GO:0051223;regulation of protein transport;0.00899710494810059!GO:0000726;non-recombinational repair;0.00908034885223007!GO:0000209;protein polyubiquitination;0.0091791031982139!GO:0019752;carboxylic acid metabolic process;0.00919189547462325!GO:0043414;biopolymer methylation;0.00925623332709731!GO:0016790;thiolester hydrolase activity;0.00925623332709731!GO:0016272;prefoldin complex;0.00935210453805537!GO:0000792;heterochromatin;0.00935210453805537!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.00959974167471618!GO:0005669;transcription factor TFIID complex;0.00981064410510243!GO:0016311;dephosphorylation;0.00981735816743246!GO:0043022;ribosome binding;0.00998307170854424!GO:0003725;double-stranded RNA binding;0.0100636217305983!GO:0031902;late endosome membrane;0.010505298072863!GO:0006082;organic acid metabolic process;0.0108895640562954!GO:0006818;hydrogen transport;0.0109574817979325!GO:0030660;Golgi-associated vesicle membrane;0.0111112265273503!GO:0006406;mRNA export from nucleus;0.0111615854159843!GO:0005832;chaperonin-containing T-complex;0.0111992170397585!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.011262267472631!GO:0051258;protein polymerization;0.0113104872573087!GO:0015992;proton transport;0.0116419099969017!GO:0051235;maintenance of localization;0.011832158691489!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0120134283765905!GO:0006376;mRNA splice site selection;0.0121384990281549!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0121384990281549!GO:0046822;regulation of nucleocytoplasmic transport;0.0123652176361707!GO:0004003;ATP-dependent DNA helicase activity;0.0126210267678736!GO:0009451;RNA modification;0.0126705441165945!GO:0048487;beta-tubulin binding;0.0128779813480731!GO:0006984;ER-nuclear signaling pathway;0.012954526425487!GO:0006400;tRNA modification;0.013336883298515!GO:0046474;glycerophospholipid biosynthetic process;0.0133713508700013!GO:0006595;polyamine metabolic process;0.013425642241543!GO:0043549;regulation of kinase activity;0.013425642241543!GO:0006378;mRNA polyadenylation;0.0137314352853414!GO:0006730;one-carbon compound metabolic process;0.0137690500495709!GO:0005853;eukaryotic translation elongation factor 1 complex;0.0137690500495709!GO:0047485;protein N-terminus binding;0.0137696112439975!GO:0051338;regulation of transferase activity;0.0139018528948576!GO:0006144;purine base metabolic process;0.0139018528948576!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0140774594618201!GO:0030968;unfolded protein response;0.0141019422151044!GO:0043596;nuclear replication fork;0.014251543697527!GO:0006338;chromatin remodeling;0.0146297152728512!GO:0008408;3'-5' exonuclease activity;0.0146640176141715!GO:0008652;amino acid biosynthetic process;0.0146832250981676!GO:0051651;maintenance of cellular localization;0.0147868678650165!GO:0000339;RNA cap binding;0.0148486285243335!GO:0030176;integral to endoplasmic reticulum membrane;0.0151623587642883!GO:0006519;amino acid and derivative metabolic process;0.016063431684545!GO:0035258;steroid hormone receptor binding;0.016262829716936!GO:0030518;steroid hormone receptor signaling pathway;0.0167160055629463!GO:0008276;protein methyltransferase activity;0.0170135073302296!GO:0009112;nucleobase metabolic process;0.0170674510298446!GO:0006607;NLS-bearing substrate import into nucleus;0.0170674510298446!GO:0016197;endosome transport;0.0170674510298446!GO:0016023;cytoplasmic membrane-bound vesicle;0.0170674510298446!GO:0042393;histone binding;0.0174492485085023!GO:0000910;cytokinesis;0.0174915123407904!GO:0030833;regulation of actin filament polymerization;0.0178182573650007!GO:0006270;DNA replication initiation;0.0178858516347013!GO:0004576;oligosaccharyl transferase activity;0.0182754510638646!GO:0031625;ubiquitin protein ligase binding;0.0184769067591224!GO:0000178;exosome (RNase complex);0.0189433408160436!GO:0043130;ubiquitin binding;0.0190898499987066!GO:0032182;small conjugating protein binding;0.0190898499987066!GO:0016301;kinase activity;0.0192149276765935!GO:0004748;ribonucleoside-diphosphate reductase activity;0.019361233796331!GO:0016728;oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor;0.019361233796331!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0193902681090196!GO:0015002;heme-copper terminal oxidase activity;0.0193902681090196!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0193902681090196!GO:0004129;cytochrome-c oxidase activity;0.0193902681090196!GO:0046467;membrane lipid biosynthetic process;0.0195083292155743!GO:0033116;ER-Golgi intermediate compartment membrane;0.0196503695620059!GO:0045859;regulation of protein kinase activity;0.0201904798630007!GO:0051540;metal cluster binding;0.0204293431973858!GO:0051536;iron-sulfur cluster binding;0.0204293431973858!GO:0000738;DNA catabolic process, exonucleolytic;0.0208480804928035!GO:0000781;chromosome, telomeric region;0.0209940482000484!GO:0008538;proteasome activator activity;0.021363532128781!GO:0007569;cell aging;0.0214777604098139!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.021477775706709!GO:0003727;single-stranded RNA binding;0.0216561009487147!GO:0000228;nuclear chromosome;0.021727025790976!GO:0005758;mitochondrial intermembrane space;0.0228112516212984!GO:0006695;cholesterol biosynthetic process;0.0234480342169568!GO:0016126;sterol biosynthetic process;0.0236183681373028!GO:0005875;microtubule associated complex;0.0241567828686892!GO:0008320;protein transmembrane transporter activity;0.0252774692595256!GO:0031647;regulation of protein stability;0.0259217589327794!GO:0005769;early endosome;0.0260868696436732!GO:0007018;microtubule-based movement;0.0266333922355319!GO:0008287;protein serine/threonine phosphatase complex;0.0269463671377947!GO:0008017;microtubule binding;0.0270871415705305!GO:0030496;midbody;0.0274573787513742!GO:0008156;negative regulation of DNA replication;0.0277377650277824!GO:0022884;macromolecule transmembrane transporter activity;0.0279905505819613!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0279905505819613!GO:0009967;positive regulation of signal transduction;0.0281863205353353!GO:0045792;negative regulation of cell size;0.0282179893775566!GO:0008250;oligosaccharyl transferase complex;0.0286634139539084!GO:0005773;vacuole;0.0291847056199276!GO:0030041;actin filament polymerization;0.0294882492783474!GO:0006091;generation of precursor metabolites and energy;0.0303870415733487!GO:0031970;organelle envelope lumen;0.0304639532331643!GO:0043631;RNA polyadenylation;0.0310170845177648!GO:0008632;apoptotic program;0.0312163713874974!GO:0051656;establishment of organelle localization;0.0318693172889026!GO:0019976;interleukin-2 binding;0.0318693172889026!GO:0004911;interleukin-2 receptor activity;0.0318693172889026!GO:0000323;lytic vacuole;0.0320259775759967!GO:0005764;lysosome;0.0320259775759967!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0320259775759967!GO:0008299;isoprenoid biosynthetic process;0.0320259775759967!GO:0004721;phosphoprotein phosphatase activity;0.0320833977968597!GO:0032940;secretion by cell;0.0324903197844493!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.033461740448294!GO:0009165;nucleotide biosynthetic process;0.0338415937477549!GO:0051059;NF-kappaB binding;0.0348303350916567!GO:0032039;integrator complex;0.0353630486955093!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0357990231252203!GO:0032984;macromolecular complex disassembly;0.0361509199990405!GO:0004659;prenyltransferase activity;0.0362878397831955!GO:0043284;biopolymer biosynthetic process;0.0365809223536263!GO:0008097;5S rRNA binding;0.0367187071120241!GO:0030308;negative regulation of cell growth;0.0367187071120241!GO:0031968;organelle outer membrane;0.0379504804032395!GO:0012506;vesicle membrane;0.0383434805278699!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0384472602830663!GO:0044450;microtubule organizing center part;0.0384513992778895!GO:0000152;nuclear ubiquitin ligase complex;0.0386627688233649!GO:0043407;negative regulation of MAP kinase activity;0.0386627688233649!GO:0033239;negative regulation of amine metabolic process;0.0388816598811609!GO:0045763;negative regulation of amino acid metabolic process;0.0388816598811609!GO:0001933;negative regulation of protein amino acid phosphorylation;0.0388816598811609!GO:0042026;protein refolding;0.0392673024464888!GO:0006505;GPI anchor metabolic process;0.0393436310247718!GO:0018196;peptidyl-asparagine modification;0.0403062717407232!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0403062717407232!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0403854451968124!GO:0022890;inorganic cation transmembrane transporter activity;0.0406594439369424!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.0406594439369424!GO:0007034;vacuolar transport;0.0412263980935604!GO:0050662;coenzyme binding;0.0414435048013516!GO:0030133;transport vesicle;0.0414650668293037!GO:0016791;phosphoric monoester hydrolase activity;0.0414650668293037!GO:0030029;actin filament-based process;0.0420327552881296!GO:0006434;seryl-tRNA aminoacylation;0.0420478228149548!GO:0004828;serine-tRNA ligase activity;0.0420478228149548!GO:0046426;negative regulation of JAK-STAT cascade;0.042070729399452!GO:0000175;3'-5'-exoribonuclease activity;0.0421693271448365!GO:0031529;ruffle organization and biogenesis;0.0424737202466999!GO:0005663;DNA replication factor C complex;0.0427155837895172!GO:0019900;kinase binding;0.0427155837895172!GO:0019079;viral genome replication;0.0427631515141736!GO:0008283;cell proliferation;0.042877750268721!GO:0019867;outer membrane;0.0429738152227934!GO:0016788;hydrolase activity, acting on ester bonds;0.0433235163923552!GO:0001558;regulation of cell growth;0.044134208021664!GO:0005652;nuclear lamina;0.0443098632120417!GO:0043601;nuclear replisome;0.0446667338704964!GO:0030894;replisome;0.0446667338704964!GO:0022406;membrane docking;0.0446667338704964!GO:0048278;vesicle docking;0.0446667338704964!GO:0016579;protein deubiquitination;0.044776618741059!GO:0008234;cysteine-type peptidase activity;0.0448604012446426!GO:0005784;translocon complex;0.0449416659044012!GO:0045746;negative regulation of Notch signaling pathway;0.0449416659044012!GO:0046488;phosphatidylinositol metabolic process;0.045307070150757!GO:0045086;positive regulation of interleukin-2 biosynthetic process;0.0455322489456527!GO:0006518;peptide metabolic process;0.0468647328883714!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0469415133178042!GO:0008361;regulation of cell size;0.0470669155500676!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0471912429313217!GO:0005869;dynactin complex;0.0474180009695105!GO:0000086;G2/M transition of mitotic cell cycle;0.0477940857075908!GO:0008629;induction of apoptosis by intracellular signals;0.0479965928291591!GO:0030258;lipid modification;0.0484247801786469!GO:0003747;translation release factor activity;0.048510768644236!GO:0008079;translation termination factor activity;0.048510768644236!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0486161344055471!GO:0016407;acetyltransferase activity;0.048766996619668!GO:0031577;spindle checkpoint;0.0490458833120029!GO:0006506;GPI anchor biosynthetic process;0.0490598899627256!GO:0019058;viral infectious cycle;0.0496633345945436
|sample_id=10452
|sample_note=
|sample_sex=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=blood
|top_motifs=CREB1:3.083618459;ATF4:2.74827858018;FOXP1:2.52944318776;NFKB1_REL_RELA:2.49962292384;HOX{A6,A7,B6,B7}:2.47356792018;NFY{A,B,C}:2.15569353908;HOXA9_MEIS1:2.0217751134;NKX2-1,4:1.89413929855;ZNF148:1.77991003939;ATF5_CREB3:1.69414855635;GFI1:1.61019488177;FOXP3:1.57375993062;MYB:1.54427038926;POU2F1..3:1.54287010992;TLX2:1.53985518037;STAT2,4,6:1.53971945646;ELK1,4_GABP{A,B1}:1.5328490176;HSF1,2:1.46960708415;AIRE:1.45805702013;RORA:1.41555459796;E2F1..5:1.37188586804;JUN:1.30894555988;ELF1,2,4:1.26601079275;YY1:1.25260428194;NRF1:1.22591197016;ATF6:1.2219961485;FOXN1:1.20439525652;NFIX:1.17923227322;RBPJ:1.14862063075;AHR_ARNT_ARNT2:1.10981262341;TEF:1.09070913281;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.08681608833;POU3F1..4:1.02978838599;STAT5{A,B}:0.950313335161;PAX4:0.90966873272;POU1F1:0.8930632576;CUX2:0.889852698608;TGIF1:0.848060912617;PBX1:0.840846436749;NANOG:0.815400870449;ZFP161:0.778763378635;TFDP1:0.764114515026;ZBTB16:0.753002508877;BPTF:0.734549434748;RFX2..5_RFXANK_RFXAP:0.727076616628;PAX3,7:0.698376614319;PAX8:0.695448083835;CRX:0.683470330585;SOX{8,9,10}:0.639787279965;HIF1A:0.638342764926;BREu{core}:0.628930509494;EVI1:0.606664483527;PITX1..3:0.572109793929;DBP:0.554298053581;CDX1,2,4:0.542947124243;TP53:0.514296460163;ADNP_IRX_SIX_ZHX:0.507558366428;MYOD1:0.48543945376;ZNF143:0.463123720391;STAT1,3:0.462535025547;RUNX1..3:0.450830047991;IRF1,2:0.426481589706;ONECUT1,2:0.415615178316;HES1:0.36126106967;ATF2:0.321850548723;RFX1:0.298037846426;SOX17:0.296965303624;ESRRA:0.248978261319;PDX1:0.232902116716;PAX2:0.222586071655;SRF:0.193639613573;FOXM1:0.190873193696;EGR1..3:0.190594275719;FOXD3:0.128801553682;LEF1_TCF7_TCF7L1,2:0.114628522643;SPI1:0.111794433495;RXR{A,B,G}:0.110259695647;XBP1:0.0900973447806;CEBPA,B_DDIT3:0.0780040297958;MAFB:0.0746726029257;FOSL2:0.0641230398196;FOS_FOS{B,L1}_JUN{B,D}:0.0595516851167;POU5F1:0.0594573689485;bHLH_family:0.0437765900065;SOX5:0.0367692554351;NKX6-1,2:0.0247875472331;GFI1B:0.0136761939083;HOX{A4,D4}:0.0133805406788;NFE2L1:-0.0202030675472;NFATC1..3:-0.0426376953252;FOXQ1:-0.0830209723017;NFE2:-0.0856095647989;SOX2:-0.094855757441;MTE{core}:-0.105274112376;MED-1{core}:-0.10930106867;MYFfamily:-0.160352176636;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.165459539019;PAX1,9:-0.174665032837;GATA6:-0.180236920851;ZNF384:-0.196345816061;ETS1,2:-0.20849841787;NFIL3:-0.228272966259;BACH2:-0.228771488878;POU6F1:-0.236699350879;IRF7:-0.257587408019;SPIB:-0.283373595432;PRRX1,2:-0.284896638996;SREBF1,2:-0.308677337017;GCM1,2:-0.332921765594;NKX3-1:-0.335226908358;HNF1A:-0.337133185426;MEF2{A,B,C,D}:-0.366418620208;ZIC1..3:-0.388119385731;TBP:-0.389313722869;PATZ1:-0.39579698825;IKZF2:-0.409530819415;HBP1_HMGB_SSRP1_UBTF:-0.419174751442;FOXA2:-0.449342572831;HNF4A_NR2F1,2:-0.493659915435;HLF:-0.512106211156;GZF1:-0.512481813093;FOX{F1,F2,J1}:-0.536861571853;DMAP1_NCOR{1,2}_SMARC:-0.547911952082;TFAP2{A,C}:-0.558025697883;MZF1:-0.56025028689;RREB1:-0.563235415353;HIC1:-0.568066573632;ESR1:-0.572524531612;TFAP2B:-0.60762799094;LHX3,4:-0.615732019907;MYBL2:-0.680450159705;LMO2:-0.682066436375;SNAI1..3:-0.683802525766;NFE2L2:-0.687868271809;FOX{D1,D2}:-0.712248257406;OCT4_SOX2{dimer}:-0.715023618583;VSX1,2:-0.735166718505;REST:-0.739941410875;NR6A1:-0.740681925105;IKZF1:-0.779191321291;ZEB1:-0.785426520855;HMGA1,2:-0.785470765126;NKX3-2:-0.791799734429;TBX4,5:-0.800212419254;ALX1:-0.858908432416;FOXL1:-0.877591317738;ARID5B:-0.880106999294;AR:-0.898568361879;TOPORS:-0.914217577166;PAX5:-0.974846096541;NKX2-3_NKX2-5:-0.986880019163;GTF2A1,2:-0.994715210193;NR5A1,2:-1.00113103401;UFEwm:-1.00855718387;PAX6:-1.0214543671;HMX1:-1.02326608796;FOX{I1,J2}:-1.02641370303;EN1,2:-1.05161277706;GATA4:-1.06188031279;CDC5L:-1.12764306629;TEAD1:-1.17083898988;NANOG{mouse}:-1.17855054234;EBF1:-1.2007648217;EP300:-1.24202642857;XCPE1{core}:-1.24389301804;HOX{A5,B5}:-1.25671521743;MAZ:-1.26794815022;GTF2I:-1.27026106537;MTF1:-1.30610702832;NHLH1,2:-1.32464789871;ZNF423:-1.35007742421;PRDM1:-1.35789714258;RXRA_VDR{dimer}:-1.37491486716;NR1H4:-1.41143653311;FOXO1,3,4:-1.45525780006;SP1:-1.49846772334;ZBTB6:-1.54480421183;KLF4:-1.553822065;TAL1_TCF{3,4,12}:-1.55996363159;NKX2-2,8:-1.56723964952;TFAP4:-1.65301589783;SMAD1..7,9:-1.68340872866;HAND1,2:-1.77230158911;TFCP2:-1.80891679295;TLX1..3_NFIC{dimer}:-1.85283405681;GLI1..3:-1.94822016337;ZNF238:-1.99709642782;ALX4:-2.02559211869;NR3C1:-2.33359405877;PPARG:-2.35138288067;T:-2.43404020877;SPZ1:-3.10465301487
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10452-106G2;search_select_hide=table117:FF:10452-106G2
}}
}}

Latest revision as of 14:03, 3 June 2020

Name:cord blood derived cell line:COBL-a 24h infection(-C)
Species:Human (Homo sapiens)
Library ID:CNhs11049
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueblood
dev stageNA
sexNA
ageNA
cell typeunclassifiable
cell lineCOBL-a
companyNA
collaborationChieko Kai (University of Tokyo)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005051
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11049 CAGE DRX007864 DRR008736
Accession ID Hg19

Library idBAMCTSS
CNhs11049 DRZ000161 DRZ001546
Accession ID Hg38

Library idBAMCTSS
CNhs11049 DRZ011511 DRZ012896
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.162
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.541
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190.0394
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0.109
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.113
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0.202
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.113
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.286
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.251
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.113
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0.113
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.0484
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0.113
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0.925
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0.113
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.092
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0.202
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.82
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.0367
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.113
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.202
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40.113
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.358
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0.264
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.113
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0.0234
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11049

Jaspar motifP-value
MA0002.20.0343
MA0003.10.24
MA0004.10.688
MA0006.10.197
MA0007.10.253
MA0009.10.973
MA0014.10.574
MA0017.10.258
MA0018.22.25756e-11
MA0019.10.799
MA0024.17.78444e-4
MA0025.10.396
MA0027.10.484
MA0028.13.73469e-5
MA0029.10.0555
MA0030.10.269
MA0031.10.441
MA0035.20.00627
MA0038.10.00236
MA0039.20.444
MA0040.10.0429
MA0041.10.267
MA0042.10.243
MA0043.12.04815e-5
MA0046.10.087
MA0047.20.533
MA0048.10.125
MA0050.10.00928
MA0051.10.0115
MA0052.10.534
MA0055.10.0393
MA0057.10.185
MA0058.10.569
MA0059.10.638
MA0060.16.58777e-19
MA0061.13.57085e-12
MA0062.23.98272e-7
MA0065.20.471
MA0066.10.0221
MA0067.10.0395
MA0068.10.0164
MA0069.10.96
MA0070.10.568
MA0071.10.711
MA0072.10.016
MA0073.10.682
MA0074.10.514
MA0076.17.44874e-6
MA0077.10.735
MA0078.10.269
MA0079.20.369
MA0080.20.324
MA0081.10.934
MA0083.10.0281
MA0084.10.936
MA0087.10.278
MA0088.10.418
MA0090.19.96853e-4
MA0091.10.0403
MA0092.10.0971
MA0093.10.584
MA0099.20.462
MA0100.10.269
MA0101.11.97125e-14
MA0102.20.364
MA0103.10.0422
MA0104.20.0559
MA0105.11.11777e-4
MA0106.10.0746
MA0107.18.53403e-18
MA0108.20.787
MA0111.10.814
MA0112.20.00506
MA0113.10.0502
MA0114.10.824
MA0115.10.856
MA0116.10.607
MA0117.10.009
MA0119.10.193
MA0122.10.413
MA0124.10.537
MA0125.10.464
MA0131.10.042
MA0135.10.00373
MA0136.10.552
MA0137.20.0208
MA0138.20.0199
MA0139.10.752
MA0140.14.6195e-4
MA0141.10.423
MA0142.10.337
MA0143.10.0123
MA0144.10.905
MA0145.10.054
MA0146.10.206
MA0147.10.0648
MA0148.10.427
MA0149.10.617
MA0150.10.795
MA0152.10.309
MA0153.10.00214
MA0154.10.354
MA0155.10.0842
MA0156.10.0799
MA0157.10.159
MA0159.10.846
MA0160.10.227
MA0162.10.0378
MA0163.10.762
MA0164.10.43
MA0258.10.0538
MA0259.10.2



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11049

Novel motifP-value
10.805
100.135
1000.249
1010.252
1020.965
1030.381
1040.822
1050.919
1060.0533
1070.027
1080.54
1090.363
110.315
1100.281
1110.968
1120.096
1130.95
1140.179
1150.156
1160.705
1170.443
1180.778
1190.451
120.579
1200.431
1210.733
1220.502
1230.239
1240.704
1250.995
1260.649
1270.215
1280.0161
1290.377
130.147
1300.216
1310.593
1320.199
1330.917
1340.555
1350.377
1360.587
1370.82
1380.0845
1390.453
140.726
1400.503
1410.529
1420.932
1430.438
1440.984
1450.404
1460.291
1470.204
1480.436
1490.00548
150.673
1500.49
1510.17
1520.0584
1530.586
1540.979
1550.631
1560.808
1570.767
1580.548
1590.703
160.173
1600.0715
1610.998
1620.22
1630.749
1640.173
1650.855
1660.658
1670.209
1680.411
1690.0197
170.254
180.605
190.0406
20.0244
200.0561
210.624
220.0851
230.109
240.742
250.725
260.814
270.0545
280.455
290.689
30.431
300.0531
310.343
320.01
330.8
340.146
350.844
360.0849
370.768
380.506
390.431
40.0115
400.761
410.447
420.749
430.78
440.143
450.235
460.385
470.592
480.447
490.683
50.479
500.715
510.403
520.256
530.925
540.281
550.0265
560.531
570.674
580.933
590.0721
60.972
600.373
610.955
620.734
630.282
640.743
650.213
668.05369e-7
670.416
680.342
690.168
70.81
700.267
710.923
720.381
730.124
740.464
750.888
760.343
770.00207
780.578
790.0471
80.169
800.318
810.442
820.13
830.771
840.42
850.0423
860.57
870.804
880.795
890.00312
90.228
900.771
910.125
920.217
930.842
940.345
950.84
960.905
970.453
980.108
990.00918



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11049


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000081 (blood cell)
0000255 (eukaryotic cell)
0000080 (circulating cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0000178 (blood)
0002331 (umbilical cord)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000179 (haemolymphatic fluid)
0000463 (organism substance)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000478 (extraembryonic structure)
0010317 (germ layer / neural crest derived structure)
0002390 (hematopoietic system)
0004535 (cardiovascular system)
0002193 (hemolymphoid system)
0001009 (circulatory system)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000625 (experimental infection sample)
0101035 (hematopoietic cell line sample)
0104053 (umbilical cord blood sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA

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