FFCP PHASE1:Mm9::chr19:9028376..9028428,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr19:9028376..9028428,+ to FFCP PHASE1:Mm9::chr19:9028376..9028428,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=70044 | |EntrezGene=70044 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=155 | |||
|TSSclassifier=NA | |||
|UniProt=Q8R3F9 | |UniProt=Q8R3F9 | ||
|association_with_transcript=36bp_to_ENSMUST00000096239,NM_197993,uc008gog.1,uc008goh.1_5end | |||
|cluster_id=chr19:9028376..9028428,+ | |||
|description=CAGE_peak_1_at_Tut1_5end | |||
|id=chr19:9028376..9028428,+ | |||
|ontology_enrichment_celltype=CL:0000838!9.19e-09!12;CL:0000988!1.90e-08!32;CL:0002032!1.90e-08!32;CL:0000037!1.90e-08!32;CL:0000566!1.90e-08!32;CL:0000837!1.90e-08!32;CL:0000084!4.28e-08!11;CL:0000827!4.28e-08!11;CL:0000542!7.30e-08!13;CL:0000051!7.30e-08!13;CL:0002320!1.03e-07!46;CL:0000134!1.03e-07!46;CL:0002031!1.89e-07!25;CL:0000791!7.34e-07!9;CL:0000789!7.34e-07!9;CL:0002420!7.34e-07!9;CL:0002419!7.34e-07!9;CL:0000790!7.34e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,9.19e-09,12;CL:0000988,1.90e-08,32;CL:0002032,1.90e-08,32;CL:0000037,1.90e-08,32;CL:0000837,1.90e-08,32;CL:0000084,4.28e-08,11;CL:0000827,4.28e-08,11;CL:0000542,7.30e-08,13;CL:0000051,7.30e-08,13;CL:0002320,1.03e-07,46;CL:0000134,1.03e-07,46;CL:0002031,1.89e-07,25;CL:0000791,7.34e-07,9;CL:0000789,7.34e-07,9;CL:0002420,7.34e-07,9;CL:0002419,7.34e-07,9;CL:0000790,7.34e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!1.20e-15!70;UBERON:0005057!3.69e-15!51;UBERON:0003929!1.01e-14!55;UBERON:0002368!1.05e-14!60;UBERON:0002530!2.30e-14!65;UBERON:0000949!1.47e-13!72;UBERON:0005911!1.05e-10!69;UBERON:0000490!1.33e-10!66;UBERON:0001007!4.56e-09!128;UBERON:0001555!4.56e-09!128;UBERON:0007026!4.56e-09!128;UBERON:0002193!4.66e-09!48;UBERON:0001041!4.84e-09!92;UBERON:0000077!6.19e-09!97;UBERON:0004921!6.89e-09!126;UBERON:0004185!6.89e-09!126;UBERON:0004177!1.05e-08!29;UBERON:0002390!1.91e-08!45;UBERON:0003061!1.91e-08!45;UBERON:0004119!1.94e-08!130;UBERON:0000925!1.94e-08!130;UBERON:0006595!1.94e-08!130;UBERON:0002370!4.78e-08!23;UBERON:0000974!4.78e-08!23;UBERON:0004807!4.78e-08!23;UBERON:0005058!4.78e-08!23;UBERON:0003351!4.78e-08!23;UBERON:0009113!4.78e-08!23;UBERON:0003295!4.78e-08!23;UBERON:0009722!4.78e-08!23;UBERON:0005562!4.78e-08!23;UBERON:0007690!4.78e-08!23;UBERON:0002384!1.03e-07!46;UBERON:0006562!1.98e-07!24;UBERON:0001557!1.98e-07!24;UBERON:0001042!1.98e-07!24;UBERON:0008814!1.98e-07!24;UBERON:0009145!1.98e-07!24;UBERON:0009854!2.41e-07!23;UBERON:0009856!2.41e-07!23;UBERON:0002107!3.01e-07!22;UBERON:0007499!3.01e-07!22;UBERON:0006925!3.01e-07!22;UBERON:0009497!3.01e-07!22;UBERON:0000015!3.01e-07!22;UBERON:0002423!3.01e-07!22;UBERON:0006235!3.01e-07!22;UBERON:0008835!3.01e-07!22;UBERON:0003894!3.01e-07!22;UBERON:0004161!3.01e-07!22;UBERON:0008836!3.01e-07!22;UBERON:0003408!4.07e-07!24;UBERON:0002365!7.43e-07!25;UBERON:0002330!7.43e-07!25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003929,9.99e-15,55;UBERON:0002368,1.04e-14,60;UBERON:0002530,2.27e-14,65;UBERON:0000949,1.46e-13,72;UBERON:0005911,1.04e-10,69;UBERON:0000490,1.33e-10,66;UBERON:0001041,2.44e-09,80;UBERON:0002193,4.62e-09,48;UBERON:0002405,4.62e-09,48;UBERON:0001007,4.64e-09,116;UBERON:0001555,4.64e-09,116;UBERON:0007026,4.64e-09,116;UBERON:0004921,6.89e-09,114;UBERON:0004177,1.03e-08,29;UBERON:0005057,1.03e-08,29;UBERON:0000077,1.81e-08,35;UBERON:0002390,1.89e-08,45;UBERON:0003061,1.89e-08,45;UBERON:0004119,2.10e-08,118;UBERON:0000925,2.10e-08,118;UBERON:0006595,2.10e-08,118;UBERON:0002370,4.73e-08,23;UBERON:0000974,4.73e-08,23;UBERON:0004807,4.73e-08,23;UBERON:0005058,4.73e-08,23;UBERON:0003351,4.73e-08,23;UBERON:0009113,4.73e-08,23;UBERON:0003295,4.73e-08,23;UBERON:0009722,4.73e-08,23;UBERON:0005562,4.73e-08,23;UBERON:0007690,4.73e-08,23;UBERON:0002384,1.03e-07,46;UBERON:0006562,1.96e-07,24;UBERON:0001557,1.96e-07,24;UBERON:0001042,1.96e-07,24;UBERON:0008814,1.96e-07,24;UBERON:0009145,1.96e-07,24;UBERON:0009854,2.41e-07,23;UBERON:0009856,2.41e-07,23;UBERON:0002107,3.01e-07,22;UBERON:0007499,3.01e-07,22;UBERON:0006925,3.01e-07,22;UBERON:0009497,3.01e-07,22;UBERON:0000015,3.01e-07,22;UBERON:0002423,3.01e-07,22;UBERON:0006235,3.01e-07,22;UBERON:0008835,3.01e-07,22;UBERON:0003894,3.01e-07,22;UBERON:0004161,3.01e-07,22;UBERON:0008836,3.01e-07,22;UBERON:0003408,4.03e-07,24;UBERON:0002365,7.43e-07,25;UBERON:0002330,7.43e-07,25 | |||
|phase1_expression=5.60520964866779,7.32848356042658,7.73498706962211,6.35174843744343,2.50447864973174,6.37941233265181,6.77476657727024,11.4919757863003,46.037912143595,37.216259685197,34.7572475497775,27.1225340584144,14.7232627740837,17.0469784717045,6.32908547449759,6.68168382386426,2.09868563438444,13.8803352757625,16.4537320326887,16.5511964201232,7.82398269389842,17.7730802649585,16.4555867157529,6.55968933452967,7.57050627521661,6.89078356938024,6.03066794622705,5.38678081714723,6.46079626151671,6.80481350351813,7.76056787293567,24.131165591466,19.0670084151217,15.8481681015439,9.53210345179206,9.64160943079256,10.4126371693808,6.69650609179052,0.7813353445238,7.32933241563318,4.1176204162171,4.09827290975067,6.79714494243615,6.79842817068117,7.90740063512214,5.68994931701213,6.25913075478431,6.97680500417429,4.83309602015838,2.91644848611425,4.05960622713551,2.87505128729943,25.6707387268337,10.1550699881588,16.4685961579807,3.34437266846731,3.43840127926508,2.06268836910977,6.47412674750713,7.93486468908049,6.33831403506179,4.40497891689872,1.77858959222228,8.99899717281399,7.9109309005358,8.5257613793532,8.38880309451533,4.61061966385865,6.32506635081714,6.75029691658453,5.04779907243317,3.71346279724945,4.63823935998388,3.91970557487853,4.2172007248024,3.67687514644008,4.40463523997555,5.10749352340751,4.76180253094355,6.3305418110493,5.94669683415663,5.2091337055676,3.35019598801657,6.75315132038016,5.95913166329559,3.53554302568401,3.13217697758026,4.28718725398191,5.07365495332333,4.60986516651392,14.2033599463822,10.3250865237766,15.6393406752783,8.63525106620507,6.49776417447669,8.06448396775204,5.33688796500657,4.77204903218562,3.37721805983729,4.94675404314476,5.49289337129054,3.84979432242953,0,0,6.061749148314,6.08063677140237,4.54972000513305,6.73684890342454,27.4474156666002,7.71899123137089,7.28638372417771,4.56698217468212,6.6878494204257,8.13902258984162,7.05532242814229,6.03199638382442,7.41584903203122,6.79616977523585,7.96149496754887,5.82360659810673,5.96272099843063,6.30337829075789,7.45567044872489,6.14839673724249,7.74952815209784,7.15279754584056,9.58520996047362,8.99854096490112,9.53026703047985,6.89036941262184,6.40500843946077,6.03140890141749,8.8650403298061,8.43861009190091,3.53239675751252,5.02947915510049,5.6011650117674,5.72272064806428,9.35074206204597,5.05060454127538,8.58794923553845,4.82794419310293,4.86167750474443,6.78171680260718,5.51095643125756,6.79002717509704,4.68508622798644,3.62184719034622,6.68260778091811,7.37513712654495,7.74184946321375,5.69908904311695,5.28289773528636,6.96504333044333,8.64284972913362,5.7719937377363,9.12877143507205,6.43369767786788,8.80906848126337,4.34964122324554,4.92504725960302,4.32148947506436,6.15536312521547,5.1158700254325,3.23960937063494,3.0229412817553,3.48755421819505,3.97002164048376,2.96207729844265,2.95501435342371,2.75633952455909,3.36259971078264,3.07370161407471,3.75777972529041,7.36014819974445,6.48299057989492,3.63460661282178,6.08236303326152,5.33220626338085,5.34144345279009,6.44337306610467,5.24377164020691,7.33847544688072,6.46767128782701,5.69434873853414,7.08205505313247,5.52937459360593,6.36660710531683,3.70431765526328,4.49409704327111,6.48414149624083,8.76221602319216,9.86273084956025,5.82667414309617,9.01661885384643,4.2766778847516,6.0125271021964,4.97964321221262,4.93244989569207,4.13308414342886,3.767969468193,5.05928372079382,9.48648406678877,8.67594549723689,8.45203678986773,10.3436571697033,6.49152388443209,7.23531479257251,8.14802725700543,8.0554918486227,11.6737363278025,8.23684239564244,12.9391385874619,10.4199465347181,10.6092808858951,7.32478746046624,9.14926808961752,10.1313139486307,6.83586803616437,8.90609635321278,5.54080919902888,4.92260748748046,7.97946844180907,5.02518772325447,2.85652369063216,5.07347484430277,4.41378403497335,5.97954662051692,4.46473352240964,5.07976275618788,5.87128938344045,7.37710198765709,4.52373851817817,2.17562273527484,9.83528546038072,7.72622889653251,5.77982123956051,5.15731421005694,6.55739781506702,7.32165688892682,6.62567260774139,4.29482618726302,5.81643173878557,4.54040716109849,6.68396022247182,4.81230102341015,3.23848561339915,7.01414058987149,5.53402889125133,7.06906896127976,6.24536374916382,7.47875535402472,6.8412522928502,5.27904393512113,3.98235415019888,8.01176099311439,6.34879469625977,5.84675747243284,5.61073596473468,5.53383266299069,8.78656196771952,11.2695456138027,7.84294232446387,6.32073515871632,5.27093042874994,7.21948802737308,15.3197822589205,7.38250485528372,7.1147276080515,8.78781843629528,4.07882537377229,8.20496560969525,6.74650984468696,14.0053876592716,4.92810586933792,4.02480934641258,9.92377791247329,6.43056386471772,8.7190790415789,5.97097956788743,5.84924485615369,6.89391778929257,5.82961673259701,4.63563255026274,8.54354403989263,5.57244543500701,7.22258656741876,8.09984365120171,8.33834789098253,11.2101304871196,12.0684685295637,12.1757763521582,12.2997976685937,3.81868247206045,5.69404788446044,7.5228202836934,7.2363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| ||
|short_description=p1@Tut1 | |||
}} | }} |
Latest revision as of 04:58, 26 September 2015
Short description: | p1@Tut1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tut1_5end |
Coexpression cluster: | MCL_coexpression_mm9:155 |
Association with transcript: | 36bp_to_ENSMUST00000096239, NM_197993, uc008gog.1, uc008goh.1_5end |
EntrezGene: | Tut1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 9.19e-09 | 12 |
hematopoietic cell | 1.90e-08 | 32 |
hematopoietic oligopotent progenitor cell | 1.90e-08 | 32 |
hematopoietic stem cell | 1.90e-08 | 32 |
hematopoietic multipotent progenitor cell | 1.90e-08 | 32 |
T cell | 4.28e-08 | 11 |
pro-T cell | 4.28e-08 | 11 |
lymphocyte | 7.30e-08 | 13 |
common lymphoid progenitor | 7.30e-08 | 13 |
connective tissue cell | 1.03e-07 | 46 |
mesenchymal cell | 1.03e-07 | 46 |
hematopoietic lineage restricted progenitor cell | 1.89e-07 | 25 |
mature alpha-beta T cell | 7.34e-07 | 9 |
alpha-beta T cell | 7.34e-07 | 9 |
immature T cell | 7.34e-07 | 9 |
mature T cell | 7.34e-07 | 9 |
immature alpha-beta T cell | 7.34e-07 | 9 |