FFCP PHASE1:Mm9::chr19:7093913..7093953,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr19:7093913..7093953,- to FFCP PHASE1:Mm9::chr19:7093913..7093953,-: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=108101 | |EntrezGene=108101 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=36 | |||
|TSSclassifier=NA | |||
|UniProt=Q8K1B8,Q3TEE6 | |UniProt=Q8K1B8,Q3TEE6 | ||
|association_with_transcript=5bp_to_ENSMUST00000040772,NM_153795,uc008gkd.2,uc012bht.1_5end | |||
|cluster_id=chr19:7093913..7093953,- | |||
|description=CAGE_peak_2_at_Fermt3_5end | |||
|id=chr19:7093913..7093953,- | |||
|ontology_enrichment_celltype=CL:0000988!3.34e-15!32;CL:0002032!3.34e-15!32;CL:0000037!3.34e-15!32;CL:0000566!3.34e-15!32;CL:0000837!3.34e-15!32;CL:0002031!8.22e-13!25;CL:0000049!8.93e-10!19;CL:0000763!1.72e-08!16;CL:0000738!2.00e-08!17;CL:0002087!2.00e-08!17;CL:0002320!4.78e-08!46;CL:0000134!4.78e-08!46;CL:0000839!4.05e-07!13;CL:0000838!5.13e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.86e-17,32;CL:0002032,3.86e-17,32;CL:0000037,3.86e-17,32;CL:0000837,3.86e-17,32;CL:0002031,7.12e-15,25;CL:0000049,2.78e-11,19;CL:0002320,5.95e-11,46;CL:0000134,5.95e-11,46;CL:0000763,9.19e-10,16;CL:0000738,3.80e-09,17;CL:0002087,3.80e-09,17;CL:0000839,3.83e-08,13;CL:0000838,5.07e-08,12;CL:0000084,2.07e-07,11;CL:0000827,2.07e-07,11;CL:0000219,2.71e-07,54;CL:0000542,5.28e-07,13;CL:0000051,5.28e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!6.19e-20!48;UBERON:0002390!8.70e-19!45;UBERON:0003061!8.70e-19!45;UBERON:0002405!5.27e-18!70;UBERON:0004177!6.78e-11!29;UBERON:0003081!1.37e-10!88;UBERON:0005057!1.67e-09!51;UBERON:0003408!7.72e-09!24;UBERON:0002371!8.70e-09!16;UBERON:0002370!1.31e-08!23;UBERON:0000974!1.31e-08!23;UBERON:0004807!1.31e-08!23;UBERON:0005058!1.31e-08!23;UBERON:0003351!1.31e-08!23;UBERON:0009113!1.31e-08!23;UBERON:0003295!1.31e-08!23;UBERON:0009722!1.31e-08!23;UBERON:0005562!1.31e-08!23;UBERON:0007690!1.31e-08!23;UBERON:0001474!3.52e-08!22;UBERON:0004765!3.52e-08!22;UBERON:0001434!3.52e-08!22;UBERON:0006562!4.40e-08!24;UBERON:0001557!4.40e-08!24;UBERON:0001042!4.40e-08!24;UBERON:0008814!4.40e-08!24;UBERON:0009145!4.40e-08!24;UBERON:0002384!4.78e-08!46;UBERON:0000926!2.50e-07!193;UBERON:0004120!2.50e-07!193;UBERON:0006603!2.50e-07!193;UBERON:0001004!8.54e-07!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.17e-24,48;UBERON:0002405,1.17e-24,48;UBERON:0002390,2.72e-23,45;UBERON:0003061,2.72e-23,45;UBERON:0004177,7.99e-14,29;UBERON:0005057,7.99e-14,29;UBERON:0003081,1.46e-11,87;UBERON:0003408,2.33e-11,24;UBERON:0002370,4.29e-11,23;UBERON:0000974,4.29e-11,23;UBERON:0004807,4.29e-11,23;UBERON:0005058,4.29e-11,23;UBERON:0003351,4.29e-11,23;UBERON:0009113,4.29e-11,23;UBERON:0003295,4.29e-11,23;UBERON:0009722,4.29e-11,23;UBERON:0005562,4.29e-11,23;UBERON:0007690,4.29e-11,23;UBERON:0002384,5.95e-11,46;UBERON:0000077,9.89e-11,35;UBERON:0006562,3.17e-10,24;UBERON:0001557,3.17e-10,24;UBERON:0001042,3.17e-10,24;UBERON:0008814,3.17e-10,24;UBERON:0009145,3.17e-10,24;UBERON:0002371,4.11e-10,16;UBERON:0001474,9.41e-10,22;UBERON:0004765,9.41e-10,22;UBERON:0001434,9.41e-10,22;UBERON:0001041,2.43e-09,80;UBERON:0002204,2.01e-08,32;UBERON:0001004,2.26e-08,42;UBERON:0000065,4.25e-08,41;UBERON:0000072,4.65e-08,27;UBERON:0000926,4.81e-08,120;UBERON:0004120,4.81e-08,120;UBERON:0006603,4.81e-08,120;UBERON:0002368,6.94e-07,60;UBERON:0002530,7.83e-07,65 | |||
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|phase1_expression=0.320297694209588,0,0,0,0,0,0,37.5748871214987,13.2341398822567,12.8735489477096,19.0051944730311,13.7208113471979,35.6097518256908,41.2624299417668,9.32707333083856,10.3262386368811,3.49780939064073,30.1266367917117,29.0682599244166,19.5219239827094,2.46625541438102,18.8652807281682,13.8435888243636,5.75972722056264,6.65286915094793,0,0,0,0.380046838912748,0.756090389279792,0.221730510655305,26.0362576118449,19.0670084151217,47.5445043046316,0,0,0,94.5881485465411,58.600150839285,84.8108465237553,105.293436357552,68.987593980803,83.0222703683273,0,0,0,0,0,0,0,0.139986421625363,0,28.3552604237574,29.0144856804538,27.8957853288245,0.257259436035947,0.85960031981627,2.57836046138721,0.202316460859598,0,0,0,0,55.343832612806,66.2540462919873,57.5488893106341,19.4740071836963,15.7529505181837,0.103689612308478,0.675029691658453,0.210324961351382,0.856952953211411,1.10434270475807,0.122490799214954,0.0958454710182364,0,0,0.255374676170375,0.307213066512487,0.131886287730194,0.182975287204819,0,0.279182999001381,0.56276261003168,0.61119299110724,0.589257170947335,0.427115042397309,0.186399445825301,0.605809546665472,0.151143120213571,0,0.860423876981386,0,0,0,0.448026887097336,4.21333260395256,0,0,0,0,0,0,0,0,0,0,2.39786147410026,19.6792791571851,1.1875371125186,2.08182392119363,1.21786191324856,1.15307748628029,0.452167921657868,0.940709657085638,0.502666365318702,0.247194967734374,2.02439099687876,25.6537060065464,3.07357014900077,10.3795513676385,6.78825354389311,0,0,0,1.78819938646014,21.4469072865597,16.7972764678154,17.2815508819368,0.299581278809645,0.457500602818626,0.125654352112864,0.347648640384553,1.79000820131231,0.83115217823824,0,1.12023300235348,12.1918831197891,0.505445516867349,0.210441855886474,0,0.689706313300419,0.540186389416048,0.452114453507145,0.340182495756639,0.384341160854549,0.374806898238915,0.258703370739016,0.431135985865684,0.378212160335639,0,0.876782929710299,0.834141747676794,1.74126083261083,0.823128545631774,0.59710280045548,18.9597560574573,21.1025283834066,22.1647529528562,1.44988040774851,0,0.36012412292203,0,0.787056926989615,0.617068451549513,0.232533944750408,0.804820204198858,1.28441876603886,1.15191894939436,1.80584210487005,0.810688095458557,1.46199987425332,1.97595103761946,2.14730270016595,0,0.308713837137853,1.32167513193519,0.528901133327089,0.853153002140936,0.928946687441754,0.644337306610467,0.605050573870028,1.11189021922435,0.760902504450237,0.949058123089023,0.329397909448022,1.75934646160189,0.795825888164603,1.75467678407208,1.79763881730844,0.648414149624083,0.398282546508734,0.569003702859245,0.456994050438915,1.1270773567308,0.814605311381257,0.193952487167626,0.280543279561274,0.379419222745544,0.147610147979602,0.31399745568275,0.370191491765402,0,8.3422552858047,7.27268281918851,5.17182858485164,8.72298521970563,6.75296047306767,8.65727896056827,10.0693648107784,7.7824908852017,6.86403532970204,1.43768206527355,7.81495990103857,2.49630138491648,2.27320990152401,1.07638448113147,0.964887042726734,5.17308932466493,1.70542270593436,0.651859905768103,0.339490171550376,0.938760993154008,2.01007508930179,1.42826184531608,0.585400943573396,2.83743259391144,1.99318220683897,2.23236676120482,4.09658286789345,6.21665934717224,3.03763023021174,28.6503439484617,21.2123216689297,2.45882136509518,1.65562047782839,0.642202359951168,0.35163505977661,0,1.00988370881749,0,0,0,0,0,0,0,0,0,1.28528526568723,1.27746076687442,1.6025904330053,0.81443479676788,1.15479086080775,0,0.242780636154981,0.604647113929502,0,1.18120757152309,0.922305443831782,2.06742634534577,1.81766864738753,0.356497378384721,2.21225730555071,0,0,0.340439605753788,0.900305470156551,0.905510786479282,1.07168517515796,0.886701168211368,1.24858172321449,0.329098041204242,1.522324745573,0.938686832254841,0.42366414172764,0.882113592219848,0.98931751764888,1.61464426695906,0.422190474497091,0.835606408021955,0.492422699235184,0.874442509889552,0.556275906031529,18.2831842453702,9.70018279427146,10.3708935327039,11.3021074202815,13.2593400889394,18.5310320297283,22.9470880491705,25.6111157752294,27.9163947084936,0,1.10717597753397,0.609958401380546,0.756037385752609,1.04544148007234,1.31017538247707,0.809186078308924,1.23980183588004,1.04702376793612,0.259229946583586,3.72803587852155,0,0.448549638131936,0.66183396182839,0.583353565032143,0.645799117388655,0.337912250981556,0.117357238645754,0.2604087696879,0.209718688851422,0,0.288030006257865,58.1460461955848,10.7444364103787,18.6933942039986,30.401472576804,36.3424192204987,45.2993488901284,59.9775293104645,56.1220203263393,66.9407563156219,63.4802699436149,74.2080722607146,71.241710820759,62.7301207494948,73.6324483743884,0.453460767230423,0,0,0,2.12508553435409,3.94133198447482,0.73260649706906,1.07184189539533,0,0,0.460325236507177,0.572895513439397,0.343706364687375,0.685082519770642,0,1.35004500046361,0.900642406448441,0,0,0.31136204275253,1.19707462020309,2.39027048055788,1.70174701947806,1.88651846365184,1.65459157605013,0.66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| ||
|short_description=p2@Fermt3 | |||
}} | }} |
Latest revision as of 03:42, 26 September 2015
Short description: | p2@Fermt3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Fermt3_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 5bp_to_ENSMUST00000040772, NM_153795, uc008gkd.2, uc012bht.1_5end |
EntrezGene: | Fermt3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.86e-17 | 32 |
hematopoietic oligopotent progenitor cell | 3.86e-17 | 32 |
hematopoietic stem cell | 3.86e-17 | 32 |
hematopoietic multipotent progenitor cell | 3.86e-17 | 32 |
hematopoietic lineage restricted progenitor cell | 7.12e-15 | 25 |
common myeloid progenitor | 2.78e-11 | 19 |
connective tissue cell | 5.95e-11 | 46 |
mesenchymal cell | 5.95e-11 | 46 |
myeloid cell | 9.19e-10 | 16 |
leukocyte | 3.80e-09 | 17 |
nongranular leukocyte | 3.80e-09 | 17 |
myeloid lineage restricted progenitor cell | 3.83e-08 | 13 |
lymphoid lineage restricted progenitor cell | 5.07e-08 | 12 |
T cell | 2.07e-07 | 11 |
pro-T cell | 2.07e-07 | 11 |
motile cell | 2.71e-07 | 54 |
lymphocyte | 5.28e-07 | 13 |
common lymphoid progenitor | 5.28e-07 | 13 |