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FFCP PHASE1:Mm9::chr12:81361507..81361530,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr12:81361507..81361530,-
|DHSsupport=NA
|short_description=p5@Actn1
|DPIdataset=NA
|description=CAGE_peak_5_at_Actn1_5end
|association_with_transcript=-149bp_to_ENSMUST00000021554,NM_134156,uc007oap.2,uc007oaq.2_5end
|EntrezGene=109711
|EntrezGene=109711
|HGNC=
|HGNC=
|MCL_coexpression_id=33
|TSSclassifier=NA
|UniProt=Q7TPR4,A1BN54
|UniProt=Q7TPR4,A1BN54
|association_with_transcript=-149bp_to_ENSMUST00000021554,NM_134156,uc007oap.2,uc007oaq.2_5end
|cluster_id=chr12:81361507..81361530,-
|description=CAGE_peak_5_at_Actn1_5end
|id=chr12:81361507..81361530,-
|ontology_enrichment_celltype=CL:0000791!1.87e-07!9;CL:0000789!1.87e-07!9;CL:0002420!1.87e-07!9;CL:0002419!1.87e-07!9;CL:0000790!1.87e-07!9;CL:0000624!9.85e-07!8
|ontology_enrichment_celltype_v019_2=CL:0000791,2.25e-23,9;CL:0000789,2.25e-23,9;CL:0002420,2.25e-23,9;CL:0002419,2.25e-23,9;CL:0000790,2.25e-23,9;CL:0000624,3.92e-20,8;CL:0000084,6.56e-19,11;CL:0000827,6.56e-19,11;CL:0000838,3.11e-17,12;CL:0000542,8.14e-16,13;CL:0000051,8.14e-16,13;CL:0000893,2.33e-14,6;CL:0002489,2.33e-14,6;CL:0000898,2.33e-14,6;CL:0000809,2.33e-14,6;CL:0000810,2.33e-14,6;CL:0000895,2.33e-14,6;CL:0000808,2.33e-14,6;CL:0000894,2.33e-14,6;CL:0000806,2.33e-14,6;CL:0000807,2.33e-14,6;CL:0000805,2.33e-14,6;CL:0002425,2.33e-14,6;CL:0002436,2.33e-14,6;CL:0002427,2.33e-14,6;CL:0002428,2.33e-14,6;CL:0002429,2.33e-14,6;CL:0002433,2.33e-14,6;CL:0002431,2.33e-14,6;CL:0002432,2.33e-14,6;CL:0000738,8.26e-12,17;CL:0002087,8.26e-12,17;CL:0002031,1.22e-07,25
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003408!3.96e-12!24;UBERON:0002370!1.22e-11!23;UBERON:0000974!1.22e-11!23;UBERON:0004807!1.22e-11!23;UBERON:0005058!1.22e-11!23;UBERON:0003351!1.22e-11!23;UBERON:0009113!1.22e-11!23;UBERON:0003295!1.22e-11!23;UBERON:0009722!1.22e-11!23;UBERON:0005562!1.22e-11!23;UBERON:0007690!1.22e-11!23;UBERON:0006562!1.58e-11!24;UBERON:0001557!1.58e-11!24;UBERON:0001042!1.58e-11!24;UBERON:0008814!1.58e-11!24;UBERON:0009145!1.58e-11!24;UBERON:0004177!2.34e-10!29;UBERON:0001004!1.17e-09!42;UBERON:0000072!1.31e-09!27;UBERON:0000065!3.23e-09!41
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.42e-35,23;UBERON:0000974,1.42e-35,23;UBERON:0004807,1.42e-35,23;UBERON:0005058,1.42e-35,23;UBERON:0003351,1.42e-35,23;UBERON:0009113,1.42e-35,23;UBERON:0003295,1.42e-35,23;UBERON:0009722,1.42e-35,23;UBERON:0005562,1.42e-35,23;UBERON:0007690,1.42e-35,23;UBERON:0006562,5.85e-34,24;UBERON:0003408,5.85e-34,24;UBERON:0001557,5.85e-34,24;UBERON:0001042,5.85e-34,24;UBERON:0008814,5.85e-34,24;UBERON:0009145,5.85e-34,24;UBERON:0000072,7.86e-30,27;UBERON:0004177,1.49e-27,29;UBERON:0005057,1.49e-27,29;UBERON:0000077,2.82e-22,35;UBERON:0007811,1.44e-21,36;UBERON:0000065,1.53e-18,41;UBERON:0001004,5.04e-18,42;UBERON:0000153,1.57e-17,43;UBERON:0002390,1.32e-16,45;UBERON:0003061,1.32e-16,45;UBERON:0002193,2.30e-15,48;UBERON:0002405,2.30e-15,48;UBERON:0003929,5.37e-13,55;UBERON:0000490,8.81e-12,66;UBERON:0002368,1.21e-11,60;UBERON:0002530,1.69e-10,65;UBERON:0005911,1.06e-09,69;UBERON:0000949,3.66e-09,72;UBERON:0001041,6.33e-08,80;UBERON:0003081,4.97e-07,87
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0.16787927191189,0.700837921786577,1.42035655785734,2.111830832275,3.7450324211519,0.68487187290202,1.19658238493005,3.25281386869291,4.10875891369288,0,0,0,0.315462165358238,0.685572168028694,0,0.425216450755349,0,0.261199789138935,0,0.22940928106717,0.57423196411502,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0.288851619751275,0,0.204169356262369,0.418531630736908,0,1.57057123192139,1.17646297606203,0.683045484958446,0,0.251793635951155,0.202753862439029,0.183546752161682,0,0,0,0.194429899074283,0,0,0.167782606057736,2.17608642603403,3.6970317905671,0.514518872071894,0.85960031981627,0,0.202316460859598,0.528990979272033,0,0.338844532069132,0,0,0,0,0,0,0.103689612308478,0,0.210324961351382,0,0.220868540951614,0,0.0958454710182364,0,0,0.127687338085188,0,0.131886287730194,0,0.52091337055676,0,0,0,0,0.569486723196412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28326477414318,0,0,0.216491041011214,0,0,0,0.258937883647172,0.148442139064825,0.346970653532272,0,0,0.150722640552623,0.23517741427141,0,0.494389935468748,0.289198713839823,0.884610551949874,0.323533699894818,0,0,0,0,0,0,0,0,0.127070227073065,0.299581278809645,2.28750301409313,0.251308704225729,0,1.02286182932132,0,0.486723789203273,0.203678727700633,0.124406970610093,0,0,0.130120442962704,0,0,0.150704817835715,0.136072998302656,0.2562274405697,0.0937017245597288,0,0,0.378212160335639,0.351902248327898,0.657587197282725,0.556094498451196,0.348252166522167,0,0.199034266818493,0,0,0,0.414251545071004,0.469052119962192,0.540186184383045,0,0,0.154267112887378,0,0.268273401399619,0.350296027101508,0.16455984991348,0.164167464079095,0.243206428637567,0.292399974850665,0,0.134206418760372,0.420579897128254,0.205809224758569,0,0,0.213288250535234,0,0,0,0.22237804384487,0.190225626112559,0,0.329397909448022,0.502670417600539,0.198956472041151,0.38992817423824,0,0.216138049874694,0.398282546508734,0,0.228497025219458,1.1270773567308,0.203651327845314,0,0.140271639780637,0.316182685621286,0,0,0,0,0,0.196558995113203,0.224862112384854,0.202860121388503,0,0.25462585178142,0,0,0,0,0,0,0,0.179397413521912,0,0.184753190166605,0,0.325929952884052,0.169745085775188,0.469380496577004,0,0,0.585400943573396,0.945810864637146,0.221464689648775,0.478364305972461,0.327726629431476,0.172684981865896,0.289298117163023,0,0,0.491764273019036,0,0.160550589987792,0,0.327869890753351,0,0.315508219416257,0,0,0,0,0,0,0.584511715822624,0.395287777946524,0.321321316421807,0.283880170416537,0.35613120733451,0.488660878060728,0.659880491890142,0,0.242780636154981,0,0.377210159511796,0,0,0.258428293168221,0,0.356497378384721,0.632073515871632,0,0,0.340439605753788,0.540183282093931,0.258717367565509,0.428674070063185,0.532020700926821,0.713475270408282,0.164549020602121,0,0,0.63549621259146,0,0.16488625294148,0,0.180938774784468,0.119372344003136,0.328281799490123,0.291480836629851,0,0.341741761595705,0,0.185194527369712,0,0.410082683163076,0.457556346413045,0,0.419854356970974,0.138199973804424,0,0.316335993581135,0.203319467126849,0.324016022465404,0,0,0.269728692769641,0,0.26175594198403,0,0.621339313086926,0,0.299033092087958,0.330916980914195,0,0.258319646955462,0.168956125490778,0.469428954583016,0.5208175393758,0.209718688851422,0,0,4.10814456816632,0.202725215290164,0.718976700153791,0.909445760844565,0.358053391334963,1.39076948346885,3.60586348559907,2.36303243479324,2.01932899896295,2.74344503957999,2.72230699869469,3.80085734885034,3.17499077413087,5.96072201126002,0.226730383615211,0,0,0.167884616364078,0.19318959403219,0,1.09890974560359,0.214368379079066,0.501572104035363,0,1.84130094602871,0,0.171853182343688,0,1.5107877947794,0.675022500231806,0,0,0.51776031175182,0.103787347584177,0.399024873401031,0.170733605754134,0,0.209613162627982,0.367687016900028,0,0,0,0.252697211763798,0.50695859978048,0,0.468207537349412,0.320125762024346,0.114870937911227,0,0.115884325944855,0,0.824171801606613,0.147198920134397,0.342869252385415,0.177475806159338,0.476872379894642,0.145346416632329,0.282328141245992,0.25384382367503,0.365855945745545,0,0.271608227691724,0.561142271657738,0.237270036248348,0.197008964751127,0.409231043169689,0.154936841185966,0,0,0,0.214871054048298,0.191288332068843,0.220591419119515,0.231867835620421
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0.16787927191189,0.700837921786577,1.42035655785734,2.111830832275,3.7450324211519,0.68487187290202,1.19658238493005,3.25281386869291,4.10875891369288,0,0,0,0.315462165358238,0.685572168028694,0,0.425216450755349,0,0.261199789138935,0,0.22940928106717,0.57423196411502,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0.288851619751275,0,0.204169356262369,0.418531630736908,0,1.57057123192139,1.17646297606203,0.683045484958446,0,0.251793635951155,0.202753862439029,0.183546752161682,0,0,0,0.194429899074283,0,0,0.167782606057736,2.17608642603403,3.6970317905671,0.514518872071894,0.85960031981627,0,0.202316460859598,0.528990979272033,0,0.338844532069132,0,0,0,0,0,0,0.103689612308478,0,0.210324961351382,0,0.220868540951614,0,0.0958454710182364,0,0,0.127687338085188,0,0.131886287730194,0,0.52091337055676,0,0,0,0,0.569486723196412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28326477414318,0,0,0.216491041011214,0,0,0,0.258937883647172,0.148442139064825,0.346970653532272,0,0,0.150722640552623,0.23517741427141,0,0.494389935468748,0.289198713839823,0.884610551949874,0.323533699894818,0,0,0,0,0,0,0,0,0.127070227073065,0.299581278809645,2.28750301409313,0.251308704225729,0,1.02286182932132,0,0.486723789203273,0.203678727700633,0.124406970610093,0,0,0.130120442962704,0,0,0.150704817835715,0.136072998302656,0.2562274405697,0.0937017245597288,0,0,0.378212160335639,0.351902248327898,0.657587197282725,0.556094498451196,0.348252166522167,0,0.199034266818493,0,0,0,0.414251545071004,0.469052119962192,0.540186184383045,0,0,0.154267112887378,0,0.268273401399619,0.350296027101508,0.16455984991348,0.164167464079095,0.243206428637567,0.292399974850665,0,0.134206418760372,0.420579897128254,0.205809224758569,0,0,0.213288250535234,0,0,0,0.22237804384487,0.190225626112559,0,0.329397909448022,0.502670417600539,0.198956472041151,0.38992817423824,0,0.216138049874694,0.398282546508734,0,0.228497025219458,1.1270773567308,0.203651327845314,0,0.140271639780637,0.316182685621286,0,0,0,0,0,0.196558995113203,0.224862112384854,0.202860121388503,0,0.25462585178142,0,0,0,0,0,0,0,0.179397413521912,0,0.184753190166605,0,0.325929952884052,0.169745085775188,0.469380496577004,0,0,0.585400943573396,0.945810864637146,0.221464689648775,0.478364305972461,0.327726629431476,0.172684981865896,0.289298117163023,0,0,0.491764273019036,0,0.160550589987792,0,0.327869890753351,0,0.315508219416257,0,0,0,0,0,0,0.584511715822624,0.395287777946524,0.321321316421807,0.283880170416537,0.35613120733451,0.488660878060728,0.659880491890142,0,0.242780636154981,0,0.377210159511796,0,0,0.258428293168221,0,0.356497378384721,0.632073515871632,0,0,0.340439605753788,0.540183282093931,0.258717367565509,0.428674070063185,0.532020700926821,0.713475270408282,0.164549020602121,0,0,0.63549621259146,0,0.16488625294148,0,0.180938774784468,0.119372344003136,0.328281799490123,0.291480836629851,0,0.341741761595705,0,0.185194527369712,0,0.410082683163076,0.457556346413045,0,0.419854356970974,0.138199973804424,0,0.316335993581135,0.203319467126849,0.324016022465404,0,0,0.269728692769641,0,0.26175594198403,0,0.621339313086926,0,0.299033092087958,0.330916980914195,0,0.258319646955462,0.168956125490778,0.469428954583016,0.5208175393758,0.209718688851422,0,0,4.10814456816632,0.202725215290164,0.718976700153791,0.909445760844565,0.358053391334963,1.39076948346885,3.60586348559907,2.36303243479324,2.01932899896295,2.74344503957999,2.72230699869469,3.80085734885034,3.17499077413087,5.96072201126002,0.226730383615211,0,0,0.167884616364078,0.19318959403219,0,1.09890974560359,0.214368379079066,0.501572104035363,0,1.84130094602871,0,0.171853182343688,0,1.5107877947794,0.675022500231806,0,0,0.51776031175182,0.103787347584177,0.399024873401031,0.170733605754134,0,0.209613162627982,0.367687016900028,0,0,0,0.252697211763798,0.50695859978048,0,0.468207537349412,0.320125762024346,0.114870937911227,0,0.115884325944855,0,0.824171801606613,0.147198920134397,0.342869252385415,0.177475806159338,0.476872379894642,0.145346416632329,0.282328141245992,0.25384382367503,0.365855945745545,0,0.271608227691724,0.561142271657738,0.237270036248348,0.197008964751127,0.409231043169689,0.154936841185966,0,0,0,0.214871054048298,0.191288332068843,0.220591419119515,0.231867835620421
|short_description=p5@Actn1
}}
}}

Latest revision as of 20:57, 26 September 2015

Short description:p5@Actn1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Actn1_5end
Coexpression cluster:MCL_coexpression_mm9:33
Association with transcript: -149bp_to_ENSMUST00000021554, NM_134156, uc007oap.2, uc007oaq.2_5end
EntrezGene:Actn1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Actn1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.11
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.75
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.20
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.25
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.11
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.70
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B54.11
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G41.39
thymus, neonate N02.CNhs11181.1541-43F83.61
thymus, neonate N03.CNhs11137.2104-43C72.36
thymus, neonate N06.CNhs11197.681-26C42.02
thymus, neonate N07.CNhs11211.713-19D32.74
thymus, neonate N10.CNhs11194.748-24E42.72
thymus, neonate N20.CNhs11186.820-7A23.80
thymus, neonate N25.CNhs11125.1362-25G73.17
thymus, neonate N30.CNhs11132.1393-42G25.96
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell2.25e-239
alpha-beta T cell2.25e-239
immature T cell2.25e-239
mature T cell2.25e-239
immature alpha-beta T cell2.25e-239
CD4-positive, alpha-beta T cell3.92e-208
T cell6.56e-1911
pro-T cell6.56e-1911
lymphoid lineage restricted progenitor cell3.11e-1712
lymphocyte8.14e-1613
common lymphoid progenitor8.14e-1613
thymocyte2.33e-146
double negative thymocyte2.33e-146
naive T cell2.33e-146
double-positive, alpha-beta thymocyte2.33e-146
CD4-positive, alpha-beta thymocyte2.33e-146
naive thymus-derived CD4-positive, alpha-beta T cell2.33e-146
DN4 thymocyte2.33e-146
DN1 thymic pro-T cell2.33e-146
DN2 thymocyte2.33e-146
DN3 thymocyte2.33e-146
immature single positive thymocyte2.33e-146
early T lineage precursor2.33e-146
mature CD4 single-positive thymocyte2.33e-146
resting double-positive thymocyte2.33e-146
double-positive blast2.33e-146
CD69-positive double-positive thymocyte2.33e-146
CD69-positive, CD4-positive single-positive thymocyte2.33e-146
CD4-positive, CD8-intermediate double-positive thymocyte2.33e-146
CD24-positive, CD4 single-positive thymocyte2.33e-146
leukocyte8.26e-1217
nongranular leukocyte8.26e-1217
hematopoietic lineage restricted progenitor cell1.22e-0725

Uber anatomy
Ontology termp-valuen
thymus1.42e-3523
neck1.42e-3523
respiratory system epithelium1.42e-3523
hemolymphoid system gland1.42e-3523
pharyngeal epithelium1.42e-3523
thymic region1.42e-3523
pharyngeal gland1.42e-3523
entire pharyngeal arch endoderm1.42e-3523
thymus primordium1.42e-3523
early pharyngeal endoderm1.42e-3523
pharynx5.85e-3424
gland of gut5.85e-3424
upper respiratory tract5.85e-3424
chordate pharynx5.85e-3424
pharyngeal arch system5.85e-3424
pharyngeal region of foregut5.85e-3424
segment of respiratory tract7.86e-3027
hemopoietic organ1.49e-2729
immune organ1.49e-2729
mixed endoderm/mesoderm-derived structure2.82e-2235
craniocervical region1.44e-2136
respiratory tract1.53e-1841
respiratory system5.04e-1842
anterior region of body1.57e-1743
hematopoietic system1.32e-1645
blood island1.32e-1645
hemolymphoid system2.30e-1548
immune system2.30e-1548
gut epithelium5.37e-1355
unilaminar epithelium8.81e-1266
endocrine gland1.21e-1160
gland1.69e-1065
endo-epithelium1.06e-0969
endocrine system3.66e-0972
foregut6.33e-0880
lateral plate mesoderm4.97e-0787
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