FFCP PHASE1:Mm9::chr10:129759925..129759961,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr10:129759925..129759961,+ to FFCP PHASE1:Mm9::chr10:129759925..129759961,+: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=67596 | |EntrezGene=67596 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=33 | |||
|TSSclassifier=NA | |||
|UniProt=Q3U132 | |UniProt=Q3U132 | ||
|association_with_transcript=17bp_to_ENSMUST00000042586,ENSMUST00000099102,NM_183264,uc007hrj.3,uc007hrk.2_5end | |||
|cluster_id=chr10:129759925..129759961,+ | |||
|description=CAGE_peak_1_at_5830405N20Rik_5end | |||
|id=chr10:129759925..129759961,+ | |||
|ontology_enrichment_celltype=CL:0000838!3.75e-09!12;CL:0000084!1.38e-08!11;CL:0000827!1.38e-08!11;CL:0000542!7.04e-08!13;CL:0000051!7.04e-08!13;CL:0000988!7.88e-08!32;CL:0002032!7.88e-08!32;CL:0000037!7.88e-08!32;CL:0000566!7.88e-08!32;CL:0000837!7.88e-08!32;CL:0000791!2.33e-07!9;CL:0000789!2.33e-07!9;CL:0002420!2.33e-07!9;CL:0002419!2.33e-07!9;CL:0000790!2.33e-07!9;CL:0000624!9.00e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,5.28e-12,32;CL:0002032,5.28e-12,32;CL:0000037,5.28e-12,32;CL:0000837,5.28e-12,32;CL:0000838,1.50e-11,12;CL:0000084,8.26e-11,11;CL:0000827,8.26e-11,11;CL:0000542,2.80e-10,13;CL:0000051,2.80e-10,13;CL:0000791,3.38e-09,9;CL:0000789,3.38e-09,9;CL:0002420,3.38e-09,9;CL:0002419,3.38e-09,9;CL:0000790,3.38e-09,9;CL:0002031,4.23e-09,25;CL:0000624,1.99e-08,8;CL:0000893,8.87e-07,6;CL:0002489,8.87e-07,6;CL:0000898,8.87e-07,6;CL:0000809,8.87e-07,6;CL:0000810,8.87e-07,6;CL:0000895,8.87e-07,6;CL:0000808,8.87e-07,6;CL:0000894,8.87e-07,6;CL:0000806,8.87e-07,6;CL:0000807,8.87e-07,6;CL:0000805,8.87e-07,6;CL:0002425,8.87e-07,6;CL:0002436,8.87e-07,6;CL:0002427,8.87e-07,6;CL:0002428,8.87e-07,6;CL:0002429,8.87e-07,6;CL:0002433,8.87e-07,6;CL:0002431,8.87e-07,6;CL:0002432,8.87e-07,6;CL:0000738,9.10e-07,17;CL:0002087,9.10e-07,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.17e-14!48;UBERON:0004177!3.65e-14!29;UBERON:0002405!3.22e-13!70;UBERON:0002390!1.25e-12!45;UBERON:0003061!1.25e-12!45;UBERON:0005057!1.06e-11!51;UBERON:0003408!1.64e-11!24;UBERON:0002370!4.11e-11!23;UBERON:0000974!4.11e-11!23;UBERON:0004807!4.11e-11!23;UBERON:0005058!4.11e-11!23;UBERON:0003351!4.11e-11!23;UBERON:0009113!4.11e-11!23;UBERON:0003295!4.11e-11!23;UBERON:0009722!4.11e-11!23;UBERON:0005562!4.11e-11!23;UBERON:0007690!4.11e-11!23;UBERON:0006562!7.31e-11!24;UBERON:0001557!7.31e-11!24;UBERON:0001042!7.31e-11!24;UBERON:0008814!7.31e-11!24;UBERON:0009145!7.31e-11!24;UBERON:0001004!1.12e-08!42;UBERON:0000065!2.60e-08!41;UBERON:0000072!2.66e-08!27;UBERON:0001041!2.67e-08!92;UBERON:0000077!1.00e-07!97;UBERON:0003081!1.28e-07!88;UBERON:0001007!5.79e-07!128;UBERON:0001555!5.79e-07!128;UBERON:0007026!5.79e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.07e-21,48;UBERON:0002405,2.07e-21,48;UBERON:0004177,2.63e-19,29;UBERON:0005057,2.63e-19,29;UBERON:0002390,3.37e-19,45;UBERON:0003061,3.37e-19,45;UBERON:0003408,8.77e-16,24;UBERON:0002370,2.92e-15,23;UBERON:0000974,2.92e-15,23;UBERON:0004807,2.92e-15,23;UBERON:0005058,2.92e-15,23;UBERON:0003351,2.92e-15,23;UBERON:0009113,2.92e-15,23;UBERON:0003295,2.92e-15,23;UBERON:0009722,2.92e-15,23;UBERON:0005562,2.92e-15,23;UBERON:0007690,2.92e-15,23;UBERON:0000077,5.84e-15,35;UBERON:0006562,2.98e-14,24;UBERON:0001557,2.98e-14,24;UBERON:0001042,2.98e-14,24;UBERON:0008814,2.98e-14,24;UBERON:0009145,2.98e-14,24;UBERON:0001004,7.27e-12,42;UBERON:0000072,1.05e-11,27;UBERON:0000065,2.26e-11,41;UBERON:0001041,2.45e-10,80;UBERON:0003081,2.52e-09,87;UBERON:0005911,2.49e-08,69;UBERON:0007811,1.18e-07,36;UBERON:0003929,2.10e-07,55;UBERON:0002530,2.34e-07,65 | |||
|phase1_expression=0,0,0,0,0,0,0,85.0922701479988,94.0468663973134,110.010327371337,18.4915405683545,26.4843567864517,120.6965146015,123.612449020462,10.9926221399169,13.7683181825082,1.39912375625629,65.1429371464761,67.186072466812,57.7169926445321,5.69790044012167,52.5249131852683,48.321960990703,6.39969691173627,8.94696196161963,0,0,0,0.760093677825496,0.756090389279792,0.443461021310609,0,0,0,0,0.166234645358492,0,0.418531630736908,0.7813353445238,1.57057123192139,0.588231488031014,0.683045484958446,0,0,0,0,0,0,0,0,0,0,22.1473039996212,28.2891235384424,30.2484419228218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51452386666368,0,0,0,0,0,0,0,4.0728881838208,0.170430322578058,0,0,0,0,0,0,0,0,0,6.39429726426736,89.3335698582742,1.48442139064825,0.520455980298408,0.304465478312141,0,0.301445281105245,0,0.251333182659351,0,2.16899035379867,7.96149496754887,1.29413479957927,2.65009822152472,6.30337829075789,1.86391761218122,0,0,2.29911349687732,17.972268675888,6.59893004092748,16.6461997465715,0,0.457500602818626,0,0,0,0,0,0.203678727700633,5.84712761867437,0,0.210441855886474,0,0,0.180062129805349,0.60281927134286,0.0680364991513279,0,0,0,0.215567992932842,0,0.351902248327898,0.657587197282725,1.66828349535359,0.348252166522167,3.08673204611915,0,4.91549231119264,6.94839349209731,7.10408748488982,0,0.234526059981096,0.180062061461015,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0.116765342367169,0.329119699826961,0.492502392237286,0.972825714550269,1.02339991197733,1.3173006917463,0.402619256281115,0,0,1.65209391491899,0,0,0,0.257734922644187,0.201683524623343,0.667134131534611,0.380451252225118,1.89811624617805,0.494096864172033,1.50801125280162,0.198956472041151,0.58489226135736,0,0.216138049874694,0.796565093017469,0,0.114248512609729,0,0,0,0.0701358198903186,0.126473074248515,0,0,0.370191491765402,0.592905254174298,1.66845105716094,2.35870794135844,1.57403478669398,2.02860121388503,1.20588579876208,1.01850340712568,1.15078454980324,1.62135226775035,1.09824565275233,1.43768206527355,1.48856379067401,1.24815069245824,0.505157755894224,0.538192240565737,0.964887042726734,4.80358294433172,0.37898282354097,0,0.169745085775188,0,1.67506257441816,0,0.195133647857799,2.20689201748667,1.10732344824387,1.75400245523236,4.26044618260919,5.18054945597687,3.03763023021174,0,0,2.95058563811422,1.65562047782839,0.160550589987792,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.99358059645788,0.534196811001766,0.488660878060728,1.64970122972535,0,0,0.302323556964751,0.377210159511796,0,0.614870295887855,0.258428293168221,0.363533729477506,1.42598951353889,1.58018378967908,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.8244312647074,1.13025098687134,0.844380948994182,0.358117032009409,0.656563598980245,1.45740418314925,0.18542530201051,22.5549562653166,5.98521917093345,10.1856990053341,6.40452753815949,9.15851325730869,10.2950177942935,20.5673900292565,18.1936888020755,19.2097963588149,0,0,0.203319467126849,0.648032044930808,0,0.218362563746178,0.269728692769641,0.41326727862668,0.523511883968059,0.777689839750757,3.72803587852155,0,0.149516546043979,0,0,0,0.168956125490778,0.234714477291508,0.13020438484395,0.209718688851422,0,0,110.287881099234,13.9880398550213,21.3638790902841,36.767592902716,44.9357006125378,65.3661657230361,60.0977247599844,73.8447635872886,78.1480322598663,76.0543930416898,91.4493499191144,107.398584575207,106.795144220766,146.914266042232,0.453460767230423,0,0,0,1.15913756419314,0.563047426353546,0.73260649706906,0.428736758158132,1.00314420807073,0,0,0,0,0,0,0,0,0,0.51776031175182,0,1.99512436700516,0.341467211508268,0.486213434136588,0.838452650511929,1.10306105070008,1.33348036680969,1.64828045791115,0.64183841918363,2.52697211763797,1.52087579934144,0.754505365544305,1.03005658216871,1.72867911493147,1.26358031702349,0.952587382566147,1.0429589335037,0.578727661391115,2.06042950401653,1.17759136107518,1.37147700954166,2.12970967391205,2.38436189947321,2.32554266611726,1.59985946706062,1.4384483341585,0.914639864363863,1.05227884575137,1.7654534799962,1.12228454331548,0.474540072496697,0.886540341380071,0,1.08455788830176,2.12197272079256,0.499621155875892,1.16965804222704,1.71896843238639,1.3390183244819,0.882365676478062,2.08681052058379 | |phase1_expression=0,0,0,0,0,0,0,85.0922701479988,94.0468663973134,110.010327371337,18.4915405683545,26.4843567864517,120.6965146015,123.612449020462,10.9926221399169,13.7683181825082,1.39912375625629,65.1429371464761,67.186072466812,57.7169926445321,5.69790044012167,52.5249131852683,48.321960990703,6.39969691173627,8.94696196161963,0,0,0,0.760093677825496,0.756090389279792,0.443461021310609,0,0,0,0,0.166234645358492,0,0.418531630736908,0.7813353445238,1.57057123192139,0.588231488031014,0.683045484958446,0,0,0,0,0,0,0,0,0,0,22.1473039996212,28.2891235384424,30.2484419228218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51452386666368,0,0,0,0,0,0,0,4.0728881838208,0.170430322578058,0,0,0,0,0,0,0,0,0,6.39429726426736,89.3335698582742,1.48442139064825,0.520455980298408,0.304465478312141,0,0.301445281105245,0,0.251333182659351,0,2.16899035379867,7.96149496754887,1.29413479957927,2.65009822152472,6.30337829075789,1.86391761218122,0,0,2.29911349687732,17.972268675888,6.59893004092748,16.6461997465715,0,0.457500602818626,0,0,0,0,0,0.203678727700633,5.84712761867437,0,0.210441855886474,0,0,0.180062129805349,0.60281927134286,0.0680364991513279,0,0,0,0.215567992932842,0,0.351902248327898,0.657587197282725,1.66828349535359,0.348252166522167,3.08673204611915,0,4.91549231119264,6.94839349209731,7.10408748488982,0,0.234526059981096,0.180062061461015,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0.116765342367169,0.329119699826961,0.492502392237286,0.972825714550269,1.02339991197733,1.3173006917463,0.402619256281115,0,0,1.65209391491899,0,0,0,0.257734922644187,0.201683524623343,0.667134131534611,0.380451252225118,1.89811624617805,0.494096864172033,1.50801125280162,0.198956472041151,0.58489226135736,0,0.216138049874694,0.796565093017469,0,0.114248512609729,0,0,0,0.0701358198903186,0.126473074248515,0,0,0.370191491765402,0.592905254174298,1.66845105716094,2.35870794135844,1.57403478669398,2.02860121388503,1.20588579876208,1.01850340712568,1.15078454980324,1.62135226775035,1.09824565275233,1.43768206527355,1.48856379067401,1.24815069245824,0.505157755894224,0.538192240565737,0.964887042726734,4.80358294433172,0.37898282354097,0,0.169745085775188,0,1.67506257441816,0,0.195133647857799,2.20689201748667,1.10732344824387,1.75400245523236,4.26044618260919,5.18054945597687,3.03763023021174,0,0,2.95058563811422,1.65562047782839,0.160550589987792,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.99358059645788,0.534196811001766,0.488660878060728,1.64970122972535,0,0,0.302323556964751,0.377210159511796,0,0.614870295887855,0.258428293168221,0.363533729477506,1.42598951353889,1.58018378967908,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.8244312647074,1.13025098687134,0.844380948994182,0.358117032009409,0.656563598980245,1.45740418314925,0.18542530201051,22.5549562653166,5.98521917093345,10.1856990053341,6.40452753815949,9.15851325730869,10.2950177942935,20.5673900292565,18.1936888020755,19.2097963588149,0,0,0.203319467126849,0.648032044930808,0,0.218362563746178,0.269728692769641,0.41326727862668,0.523511883968059,0.777689839750757,3.72803587852155,0,0.149516546043979,0,0,0,0.168956125490778,0.234714477291508,0.13020438484395,0.209718688851422,0,0,110.287881099234,13.9880398550213,21.3638790902841,36.767592902716,44.9357006125378,65.3661657230361,60.0977247599844,73.8447635872886,78.1480322598663,76.0543930416898,91.4493499191144,107.398584575207,106.795144220766,146.914266042232,0.453460767230423,0,0,0,1.15913756419314,0.563047426353546,0.73260649706906,0.428736758158132,1.00314420807073,0,0,0,0,0,0,0,0,0,0.51776031175182,0,1.99512436700516,0.341467211508268,0.486213434136588,0.838452650511929,1.10306105070008,1.33348036680969,1.64828045791115,0.64183841918363,2.52697211763797,1.52087579934144,0.754505365544305,1.03005658216871,1.72867911493147,1.26358031702349,0.952587382566147,1.0429589335037,0.578727661391115,2.06042950401653,1.17759136107518,1.37147700954166,2.12970967391205,2.38436189947321,2.32554266611726,1.59985946706062,1.4384483341585,0.914639864363863,1.05227884575137,1.7654534799962,1.12228454331548,0.474540072496697,0.886540341380071,0,1.08455788830176,2.12197272079256,0.499621155875892,1.16965804222704,1.71896843238639,1.3390183244819,0.882365676478062,2.08681052058379 | ||
|short_description=p1@5830405N20Rik | |||
}} | }} |
Latest revision as of 19:38, 25 September 2015
Short description: | p1@5830405N20Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_5830405N20Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | 17bp_to_ENSMUST00000042586, ENSMUST00000099102, NM_183264, uc007hrj.3, uc007hrk.2_5end |
EntrezGene: | 5830405N20Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.07e-21 | 48 |
immune system | 2.07e-21 | 48 |
hemopoietic organ | 2.63e-19 | 29 |
immune organ | 2.63e-19 | 29 |
hematopoietic system | 3.37e-19 | 45 |
blood island | 3.37e-19 | 45 |
gland of gut | 8.77e-16 | 24 |
thymus | 2.92e-15 | 23 |
neck | 2.92e-15 | 23 |
respiratory system epithelium | 2.92e-15 | 23 |
hemolymphoid system gland | 2.92e-15 | 23 |
pharyngeal epithelium | 2.92e-15 | 23 |
thymic region | 2.92e-15 | 23 |
pharyngeal gland | 2.92e-15 | 23 |
entire pharyngeal arch endoderm | 2.92e-15 | 23 |
thymus primordium | 2.92e-15 | 23 |
early pharyngeal endoderm | 2.92e-15 | 23 |
mixed endoderm/mesoderm-derived structure | 5.84e-15 | 35 |
pharynx | 2.98e-14 | 24 |
upper respiratory tract | 2.98e-14 | 24 |
chordate pharynx | 2.98e-14 | 24 |
pharyngeal arch system | 2.98e-14 | 24 |
pharyngeal region of foregut | 2.98e-14 | 24 |
respiratory system | 7.27e-12 | 42 |
segment of respiratory tract | 1.05e-11 | 27 |
respiratory tract | 2.26e-11 | 41 |
foregut | 2.45e-10 | 80 |
lateral plate mesoderm | 2.52e-09 | 87 |
endo-epithelium | 2.49e-08 | 69 |
craniocervical region | 1.18e-07 | 36 |
gut epithelium | 2.10e-07 | 55 |
gland | 2.34e-07 | 65 |