FFCP PHASE1:Hg19::chrX:70435071..70435105,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:70435071..70435105,+ to FFCP PHASE1:Hg19::chrX:70435071..70435105,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2705 | |EntrezGene=2705 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4283 | |HGNC=4283 | ||
|TSSclassifier=strong | |||
|UniProt=C9JWU8 | |UniProt=C9JWU8 | ||
|association_with_transcript=-3bp_to_ENST00000447581_5end | |||
|cluster_id=chrX:70435071..70435105,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_GJB1_5end | |||
|id=chrX:70435071..70435105,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.40e-10!12;CL:0000417!1.40e-10!12;CL:0000668!1.40e-10!12;CL:0000414!1.40e-10!12;CL:0000412!1.40e-10!12;CL:0000182!1.40e-10!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.93e-15;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.86e-15,12;CL:0000223,8.98e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0009497;5.44e-17;13!UBERON:0004161;1.53e-16;11!UBERON:0003104;5.46e-13;31!UBERON:0006595;8.22e-10;86!UBERON:0001041;1.27e-07;30!UBERON:0007297;9.31e-07;2 | |||
|ontology_enrichment_disease=DOID:299!3.12e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:299;1.33e-07;25!DOID:3493;3.90e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:299,1.33e-07,25;DOID:3493,3.79e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004921!2.05e-22!129;UBERON:0004185!2.05e-22!129;UBERON:0001007!3.43e-19!155;UBERON:0001555!3.43e-19!155;UBERON:0007026!3.43e-19!155;UBERON:0004119!2.78e-17!169;UBERON:0000925!2.78e-17!169;UBERON:0006595!2.78e-17!169;UBERON:0000077!2.84e-17!130;UBERON:0009497!5.13e-17!25;UBERON:0000015!5.13e-17!25;UBERON:0002423!5.13e-17!25;UBERON:0006235!5.13e-17!25;UBERON:0004161!5.13e-17!25;UBERON:0009854!1.29e-16!23;UBERON:0008835!3.58e-15!22;UBERON:0003894!3.58e-15!22;UBERON:0005172!2.98e-14!55;UBERON:0005173!2.98e-14!55;UBERON:0009856!3.40e-14!26;UBERON:0000466!2.98e-13!126;UBERON:0005409!3.18e-13!35;UBERON:0003929!6.09e-13!54;UBERON:0007499!7.10e-13!25;UBERON:0001041!2.13e-12!98;UBERON:0002417!3.57e-12!61;UBERON:0000916!3.57e-12!61;UBERON:0002365!1.02e-11!31;UBERON:0002330!1.02e-11!31;UBERON:0002107!1.28e-11!19;UBERON:0006925!1.28e-11!19;UBERON:0008836!1.28e-11!19;UBERON:0005177!2.61e-11!107;UBERON:0007023!3.93e-11!115;UBERON:0000160!1.25e-10!27;UBERON:0005057!1.48e-10!26;UBERON:0003104!1.69e-10!238;UBERON:0009142!1.69e-10!238;UBERON:0005911!1.03e-09!82;UBERON:0002530!2.35e-09!59;UBERON:0000059!4.75e-08!11;UBERON:0000062!5.96e-08!511;UBERON:0009569!6.34e-08!113;UBERON:0000481!4.04e-07!347;UBERON:0002368!7.00e-07!35;UBERON:0006947!7.65e-07!3;UBERON:0004054!7.65e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;4.05e-18;22!UBERON:0004921;5.74e-18;33!UBERON:0002423;3.28e-17;25!UBERON:0002107;4.98e-17;19!UBERON:0006925;4.98e-17;19!UBERON:0002365;1.89e-15;31!UBERON:0002330;1.89e-15;31!UBERON:0000160;4.38e-14;17!UBERON:0001007;1.14e-12;81!UBERON:0006947;3.58e-09;3!UBERON:0004054;3.58e-09;3!UBERON:0000059;1.01e-08;11!UBERON:0004175;1.03e-08;21!UBERON:0002368;3.89e-08;33!UBERON:0005172;5.19e-08;52!UBERON:0005173;5.19e-08;52!UBERON:0001155;8.39e-08;9!UBERON:0001829;5.71e-07;2!UBERON:0005904;5.75e-07;4!UBERON:0001041;6.36e-07;14!UBERON:0002530;8.42e-07;57!UBERON:0001555;9.20e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,1.88e-24,118;UBERON:0001007,2.19e-19,145;UBERON:0001555,2.19e-19,145;UBERON:0007026,2.19e-19,145;UBERON:0009854,7.67e-19,23;UBERON:0005409,4.30e-18,25;UBERON:0009497,3.08e-17,25;UBERON:0000015,3.08e-17,25;UBERON:0002423,3.08e-17,25;UBERON:0006235,3.08e-17,25;UBERON:0004161,3.08e-17,25;UBERON:0002107,4.67e-17,19;UBERON:0006925,4.67e-17,19;UBERON:0008836,4.67e-17,19;UBERON:0008835,6.68e-17,22;UBERON:0003894,6.68e-17,22;UBERON:0004119,1.25e-16,160;UBERON:0000925,1.25e-16,160;UBERON:0006595,1.25e-16,160;UBERON:0009856,2.76e-16,26;UBERON:0002365,8.45e-16,31;UBERON:0002330,8.45e-16,31;UBERON:0007499,1.62e-14,25;UBERON:0005172,1.82e-14,54;UBERON:0005173,1.82e-14,54;UBERON:0000160,4.34e-14,17;UBERON:0001041,8.85e-14,87;UBERON:0002417,1.60e-12,60;UBERON:0000916,1.60e-12,60;UBERON:0003929,1.78e-11,54;UBERON:0002530,2.75e-10,59;UBERON:0005177,5.26e-10,101;UBERON:0011216,1.22e-09,223;UBERON:0006947,3.63e-09,3;UBERON:0004054,3.63e-09,3;UBERON:0000059,9.99e-09,11;UBERON:0007023,1.03e-08,114;UBERON:0002368,4.35e-08,35;UBERON:0005911,5.63e-08,82;UBERON:0001155,8.33e-08,9;UBERON:0009569,1.60e-07,112;UBERON:0004175,4.43e-07,25;UBERON:0000949,5.38e-07,45;UBERON:0001829,5.71e-07,2;UBERON:0005904,5.81e-07,4 | |||
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| ||
|short_description=p1@GJB1 | |||
}} | }} |
Latest revision as of 06:55, 16 September 2015
Short description: | p1@GJB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GJB1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -3bp_to_ENST00000447581_5end |
EntrezGene: | GJB1 |
HGNC: | 4283 |
UniProt: | C9JWU8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.86e-15 | 12 |
endodermal cell | 8.98e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 1.33e-07 | 25 |
signet ring cell adenocarcinoma | 3.79e-07 | 2 |