FFCP PHASE1:Hg19::chr9:17579057..17579074,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:17579057..17579074,+ to FFCP PHASE1:Hg19::chr9:17579057..17579074,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6456 | |EntrezGene=6456 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10831 | |HGNC=10831 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-5bp_to_ENST00000467085_5end | |||
|cluster_id=chr9:17579057..17579074,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_SH3GL2_5end | |||
|id=chr9:17579057..17579074,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000540;4.64e-09;6!CL:0000404;4.64e-09;6!CL:0002322;4.80e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.94e-09,6;CL:0000031,4.94e-09,6;CL:0000404,4.94e-09,6;CL:0000047,5.87e-09,8;CL:0002322,3.98e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.90e-13;82!CL:0000031;4.64e-09;6!UBERON:0008947;3.88e-08;29!UBERON:0006215;2.83e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.72e-54!82;UBERON:0005743!7.42e-54!86;UBERON:0001049!8.08e-51!57;UBERON:0005068!8.08e-51!57;UBERON:0006241!8.08e-51!57;UBERON:0007135!8.08e-51!57;UBERON:0000073!1.83e-47!94;UBERON:0001016!1.83e-47!94;UBERON:0000955!1.31e-44!69;UBERON:0006238!1.31e-44!69;UBERON:0002616!1.75e-42!59;UBERON:0002780!5.55e-42!41;UBERON:0001890!5.55e-42!41;UBERON:0006240!5.55e-42!41;UBERON:0003075!8.43e-41!86;UBERON:0007284!8.43e-41!86;UBERON:0003080!1.34e-40!42;UBERON:0002346!4.22e-39!90;UBERON:0007023!1.63e-38!115;UBERON:0001893!5.66e-35!34;UBERON:0002020!6.32e-35!34;UBERON:0003528!6.32e-35!34;UBERON:0002791!8.51e-34!33;UBERON:0001869!1.48e-33!32;UBERON:0003056!9.02e-30!61;UBERON:0002619!4.42e-27!22;UBERON:0000956!2.91e-26!25;UBERON:0000203!2.91e-26!25;UBERON:0001950!6.25e-25!20;UBERON:0000153!9.38e-24!129;UBERON:0007811!9.38e-24!129;UBERON:0004121!2.91e-23!169;UBERON:0000924!8.63e-23!173;UBERON:0006601!8.63e-23!173;UBERON:0000033!1.26e-22!123;UBERON:0000064!6.62e-15!219;UBERON:0000922!1.25e-12!612;UBERON:0000025!1.45e-12!194;UBERON:0000062!4.55e-12!511;UBERON:0000477!2.38e-11!286;UBERON:0003076!3.44e-11!15;UBERON:0003057!3.44e-11!15;UBERON:0002420!1.86e-10!9;UBERON:0007245!1.86e-10!9;UBERON:0010009!1.86e-10!9;UBERON:0010011!1.86e-10!9;UBERON:0000454!1.86e-10!9;UBERON:0000468!2.09e-10!659;UBERON:0001871!4.03e-10!7;UBERON:0002308!5.11e-10!9;UBERON:0000125!5.11e-10!9;UBERON:0002050!6.37e-10!605;UBERON:0005423!6.37e-10!605;UBERON:0001737!7.83e-10!9;UBERON:0000923!1.38e-09!604;UBERON:0005291!1.38e-09!604;UBERON:0006598!1.38e-09!604;UBERON:0002532!1.38e-09!604;UBERON:0000481!5.83e-09!347;UBERON:0004733!6.80e-09!12;UBERON:0002028!6.80e-09!12;UBERON:0007277!6.80e-09!12;UBERON:0004111!7.59e-09!241;UBERON:0000467!1.15e-08!625;UBERON:0000480!1.40e-08!626;UBERON:0000200!1.78e-08!6;UBERON:0001894!2.65e-08!7;UBERON:0006222!2.65e-08!7;UBERON:0009663!3.35e-08!7;UBERON:0000483!3.43e-08!309;UBERON:0000119!3.47e-08!312;UBERON:0004732!5.62e-08!13;UBERON:0001872!2.87e-07!5;UBERON:0002021!3.20e-07!5;UBERON:0000349!3.79e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.60e-42;41!UBERON:0001890;1.60e-42;41!UBERON:0001869;1.22e-41;32!UBERON:0001893;2.56e-41;34!UBERON:0003528;3.10e-41;34!UBERON:0002020;3.10e-41;34!UBERON:0002791;4.48e-41;32!UBERON:0002619;6.66e-41;22!UBERON:0000073;7.04e-39;53!UBERON:0002616;7.04e-39;53!UBERON:0001950;1.43e-37;20!UBERON:0000956;3.02e-35;25!UBERON:0000203;3.02e-35;25!UBERON:0000955;1.91e-28;68!UBERON:0001017;1.56e-26;75!UBERON:0001016;2.84e-22;83!UBERON:0002420;2.68e-15;9!UBERON:0007245;2.68e-15;9!UBERON:0010009;2.68e-15;9!UBERON:0010011;2.68e-15;9!UBERON:0000454;2.68e-15;9!UBERON:0000125;1.25e-14;9!UBERON:0002308;1.25e-14;9!UBERON:0001737;2.97e-14;9!UBERON:0001557;2.97e-14;9!UBERON:0001871;4.42e-13;6!UBERON:0000200;3.35e-12;6!UBERON:0001894;6.30e-12;7!UBERON:0009663;7.79e-12;7!UBERON:0004733;2.36e-11;12!UBERON:0002028;2.36e-11;12!UBERON:0007023;2.92e-11;114!UBERON:0001872;2.45e-10;5!UBERON:0002298;2.53e-10;6!UBERON:0004732;2.58e-10;13!UBERON:0002021;2.95e-10;5!UBERON:0000349;3.61e-10;5!UBERON:0011216;8.21e-09;132!UBERON:0000369;2.31e-08;4!UBERON:0002435;2.31e-08;4!UBERON:0000204;2.31e-08;4!UBERON:0003296;6.43e-08;4!UBERON:0010133;6.43e-08;4!UBERON:0000922;1.58e-07;49!UBERON:0002680;2.30e-07;9!UBERON:0001895;2.30e-07;9!UBERON:0002784;3.09e-07;4!UBERON:0001870;6.30e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.16e-73,81;UBERON:0001049,1.12e-70,56;UBERON:0005068,1.12e-70,56;UBERON:0006241,1.12e-70,56;UBERON:0007135,1.12e-70,56;UBERON:0000073,1.94e-69,53;UBERON:0002616,1.94e-69,53;UBERON:0001016,4.50e-64,89;UBERON:0000955,1.05e-62,68;UBERON:0006238,1.05e-62,68;UBERON:0002780,2.14e-59,41;UBERON:0001890,2.14e-59,41;UBERON:0003080,2.14e-59,41;UBERON:0006240,2.14e-59,41;UBERON:0003075,4.81e-49,82;UBERON:0007284,4.81e-49,82;UBERON:0001893,1.30e-48,34;UBERON:0003528,1.53e-48,34;UBERON:0002020,1.53e-48,34;UBERON:0001869,2.13e-46,32;UBERON:0002346,5.44e-46,86;UBERON:0002791,1.24e-45,32;UBERON:0003056,6.02e-42,61;UBERON:0002619,7.13e-41,22;UBERON:0010371,1.77e-38,104;UBERON:0001950,1.50e-37,20;UBERON:0011216,9.51e-37,223;UBERON:0000956,3.21e-35,25;UBERON:0000203,3.21e-35,25;UBERON:0007023,3.41e-32,114;UBERON:0004121,5.23e-29,171;UBERON:0000924,5.23e-29,171;UBERON:0006601,5.23e-29,171;UBERON:0010314,1.31e-25,132;UBERON:0002420,3.11e-15,9;UBERON:0007245,3.11e-15,9;UBERON:0010009,3.11e-15,9;UBERON:0010011,3.11e-15,9;UBERON:0000454,3.11e-15,9;UBERON:0000125,1.47e-14,9;UBERON:0002308,1.47e-14,9;UBERON:0000025,2.71e-14,192;UBERON:0001737,2.83e-14,9;UBERON:0001871,4.88e-13,6;UBERON:0003076,1.04e-12,15;UBERON:0003057,1.04e-12,15;UBERON:0000200,3.42e-12,6;UBERON:0001894,6.30e-12,7;UBERON:0006222,6.30e-12,7;UBERON:0009663,9.01e-12,7;UBERON:0000922,1.23e-11,592;UBERON:0004733,2.47e-11,12;UBERON:0002028,2.47e-11,12;UBERON:0007277,2.47e-11,12;UBERON:0001872,2.43e-10,5;UBERON:0004732,2.69e-10,13;UBERON:0002298,2.69e-10,6;UBERON:0002021,2.87e-10,5;UBERON:0000349,3.71e-10,5;UBERON:0004111,4.75e-10,240;UBERON:0005423,3.21e-09,581;UBERON:0000923,1.47e-08,560;UBERON:0010316,1.47e-08,560;UBERON:0005291,1.47e-08,560;UBERON:0006598,1.47e-08,560;UBERON:0010317,1.47e-08,560;UBERON:0002532,1.47e-08,560;UBERON:0000369,2.29e-08,4;UBERON:0002435,2.29e-08,4;UBERON:0000204,2.29e-08,4;UBERON:0010082,2.29e-08,4;UBERON:0002050,2.53e-08,564;UBERON:0003296,6.32e-08,4;UBERON:0010133,6.32e-08,4;UBERON:0002680,2.35e-07,9;UBERON:0001895,2.35e-07,9;UBERON:0010092,2.35e-07,9;UBERON:0002784,3.06e-07,4;UBERON:0000483,5.54e-07,306;UBERON:0001870,6.12e-07,3;UBERON:0000119,8.91e-07,309 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0,0,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,6.02503747289478,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45071417671979,0,0,0,0,0,0,0.257640540045629,0.18611685633159,0,0,0,0,0,0,0,0,0.773043412653187,0,0.286804595389004,3.04934265323988,1.72288698817931,1.85910308591229,1.34759371519982,1.7662459561294,0.72995471815166,0,0,0,0,0,6.62518080223126,8.59781919398319,6.7483088367375,7.61028411853518,8.49729831960384,9.01628352622167,8.08987848960986,9.22240886089127,12.3119090222845,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,1.74306691720059,0.099972991182057,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0,0,7.8083912314573,6.18631050222156,6.03058555203656,5.74144876487847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231046011313244,0,0,0,0,0,0,0,0,0.501689773854853,0.509752546090077,0,0,0,0,1.28225062558195,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,45.7307917972497,21.2410818779874,0,0,0,0.19924798825107,0,8.06184793133683,0,0,0,0,0,0,1.1837208676432,0,0,10.6626602070474,29.5002552154687,19.9613798001194,0,0,0,0,0,9.45550727071745,4.48166385213904,6.9985107211981,6.25049981759852,23.9150174169737,19.0542373028145,73.2392334322,117.766911826754,70.6358809298979,27.8619454385545,3.37709236908869,16.173154336318,0.0769502585037971,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,11.8608451472249,4.69542967996711,5.53436332378913,2.56124305326573,0,13.5873378520697,0,0,0,0,1.20990716048664,23.5676026455477,0.31593289814244,9.01940516486955,2.07376382794494,0,0,0,0,5.40758137456606,0,0,0,0,0.17472666824203,0,8.51455715343949,10.4517723433245,8.37577661942734,0.0969890164884194,0.176512253383001,6.55344148263544,0,0,33.8079650404392,9.19091498853574,0,0.213452994739353,0.19980960958213,0.288180834308212,0,0.686379991447858,0,0.124252535565433,0,0.135904206073614,0.209205692624666,0,0,7.80546375322726,2.60120219894787,0,0,0,0.279282401272254,0.458320848023367,0,0.998395002494955,0.858452096273142,0,0,0,0,0,0,0,0,0,27.8330391433256,14.3013576417154,2.41129722697529,4.26372253451425,2.9080823662043,0.2249738915515,1.5476039091159,44.0434285770679,0,4.80714814525109,1.20645552710496,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,13.7039933743244,5.2893040697076,0,0,0.640724475406168,0.471612915298998,0.414239055347196,0,0,0,0,0,0,0,0,0,42.5312726384153,48.9325322256872,23.9114677649415,7.45431954397093,11.8694085144432,10.5563885000352,12.4513771442608,0,0,0,0,2.34167452903441,25.0713379496728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0.428883182749851,0,0,0,0,0.358177682162975,0,0,0.883445729729405,0,0,0,0,0.607719912354764,20.4622485504562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,4.80342448971282,0,0,30.5731111459147,29.7562810283728,17.4000906372295,44.3051346760031,21.9302375712895,40.6644644489601,23.898395553514,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,33.2960292168686,21.0891086625739,30.5896458821752,33.4835477823828,27.8957152599292,0,0,0.175871244359621,0,18.2138624198618,12.7787814443153,15.7811057101524,18.2129753081038,0,0,0,13.0501887315517,34.5964788940586,0.118193840883968,0.111231401892069,1.17739639275771,22.1532981781563,1.96190514319652,2.73947616152849,0,0,2.64463213453628,8.37472142183451,0,0,0,0,0,0,0,0,0,0,0.68732060563215,0.31020638566432,0,0,0,0,0,0,0,0,41.4072850327927,0,0.118920090777569,1.35535298446752,4.39762066981717,17.5116898537341,0.154348316215889,0,0.470317296361523,1.71603825227734,0,7.85233868459781,0.891139200981258,3.8039015482506,0,0,0.0644578879735772,0,0,0,0,2.92134555298607,0,1.00337708206016,0.157771562193185,35.5595493698484,20.9448331363381,1.5870805215462,0,0,0,0,0,0,0.203977659483963,0.801652215796681,3.76769088092864,0,0.833565680400634,1.87574891109325,5.80418607621146,4.2407528303377,0.852935927603924,0.23806443146374,0.387533459016037,0.0620747142958579,0,0.891060215894309,0.202117188958219,0,0,0,0,0.332660356546013,2.68630786416216,0.106727345877715,0,0,0,0.488965776731466,0.813792356631477,0,0.2012737935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| ||
|short_description=p2@SH3GL2 | |||
}} | }} |
Latest revision as of 20:29, 16 September 2015
Short description: | p2@SH3GL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SH3GL2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -5bp_to_ENST00000467085_5end |
EntrezGene: | SH3GL2 |
HGNC: | 10831 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.94e-09 | 6 |
neuroblast | 4.94e-09 | 6 |
electrically signaling cell | 4.94e-09 | 6 |
neuronal stem cell | 5.87e-09 | 8 |
embryonic stem cell | 3.98e-07 | 5 |