FFCP PHASE1:Hg19::chr7:27157970..27157995,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:27157970..27157995,- to FFCP PHASE1:Hg19::chr7:27157970..27157995,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:27157970..27157995,- | |||
|coexpression_cluster_id=C4678 | |||
|description=CAGE_peak_at_chr7:27157970..27157995,- | |||
|id=chr7:27157970..27157995,- | |||
|ontology_enrichment_celltype=CL:1000497!6.13e-13!18;CL:0002518!6.13e-13!18;CL:1000449!1.38e-12!16;CL:1000507!2.25e-12!12;CL:1000494!2.25e-12!12;CL:0000192!4.01e-10!42;CL:0000514!4.01e-10!42;CL:0000183!1.04e-08!59;CL:0002681!1.08e-08!13;CL:0002584!1.08e-08!13;CL:0000187!4.95e-08!54;CL:0000393!2.59e-07!60;CL:0000211!2.59e-07!60;CL:0000680!2.72e-07!57;CL:0000056!2.72e-07!57;CL:0000355!2.72e-07!57;CL:0002539!3.93e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:1000507;2.71e-26;10!CL:1000494;2.71e-26;10!CL:1000497;3.46e-26;17!CL:0002518;3.46e-26;17!CL:1000449;5.23e-25;15!CL:0002681;1.90e-16;12!CL:0002584;1.90e-16;12!CL:0002579;7.43e-11;3!CL:0000192;2.30e-08;43!CL:0002539;2.85e-08;10!CL:0000650;7.34e-08;2!CL:1000500;7.34e-08;2!CL:1000618;7.34e-08;2!CL:1001318;7.34e-08;2!CL:0002173;7.34e-08;2!CL:1000746;1.05e-07;7!CL:1000612;1.05e-07;7!CL:0002598;2.89e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,1.87e-26,17;CL:0002518,1.87e-26,17;CL:1000507,1.94e-26,10;CL:1000494,1.94e-26,10;CL:1000449,2.93e-25,15;CL:0002681,1.44e-16,12;CL:0002584,1.44e-16,12;CL:0002579,7.46e-11,3;CL:0000192,2.06e-10,43;CL:0000514,2.06e-10,43;CL:0002539,1.90e-08,10;CL:0000650,5.79e-08,2;CL:1000500,5.79e-08,2;CL:1000618,5.79e-08,2;CL:1001318,5.79e-08,2;CL:0002173,5.79e-08,2;CL:1000746,7.31e-08,7;CL:1000612,7.31e-08,7;CL:0000187,1.59e-07,55;CL:0000222,3.05e-07,121;CL:0002598,3.41e-07,2;CL:0000680,5.38e-07,58;CL:0000056,5.38e-07,58;CL:0000355,5.38e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;2.30e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009569!1.51e-15!113;UBERON:0002100!2.06e-14!216;UBERON:0000466!7.21e-14!126;UBERON:0006555!1.69e-13!17;UBERON:0005103!1.69e-13!17;UBERON:0000083!1.69e-13!17;UBERON:0009201!1.69e-13!17;UBERON:0004819!1.69e-13!17;UBERON:0006553!1.69e-13!17;UBERON:0003074!1.69e-13!17;UBERON:0003060!1.69e-13!17;UBERON:0003914!4.23e-13!118;UBERON:0000464!6.21e-13!104;UBERON:0004211!1.38e-12!16;UBERON:0001285!1.38e-12!16;UBERON:0007684!1.38e-12!16;UBERON:0003220!1.38e-12!16;UBERON:0004208!1.38e-12!16;UBERON:0000080!1.59e-12!18;UBERON:0002120!1.59e-12!18;UBERON:0004875!1.59e-12!18;UBERON:0005721!1.59e-12!18;UBERON:0005754!1.59e-12!18;UBERON:0007297!1.59e-12!18;UBERON:0009773!2.25e-12!12;UBERON:0001231!2.25e-12!12;UBERON:0004810!2.25e-12!12;UBERON:0000489!2.53e-12!32;UBERON:0005177!4.92e-12!107;UBERON:0000058!8.35e-12!26;UBERON:0002417!1.08e-11!61;UBERON:0000916!1.08e-11!61;UBERON:0000025!1.58e-11!194;UBERON:0005256!3.82e-11!143;UBERON:0002113!5.10e-11!27;UBERON:0003918!5.10e-11!27;UBERON:0005095!5.10e-11!27;UBERON:0007687!5.10e-11!27;UBERON:0004876!7.03e-11!20;UBERON:0003886!1.05e-10!63;UBERON:0003103!2.44e-10!69;UBERON:0003887!3.53e-10!21;UBERON:0000481!9.45e-10!347;UBERON:0001135!1.14e-09!15;UBERON:0003104!1.94e-09!238;UBERON:0009142!1.94e-09!238;UBERON:0000353!6.08e-09!17;UBERON:0004111!6.52e-09!241;UBERON:0002553!7.56e-09!70;UBERON:0001225!1.08e-08!13;UBERON:0008987!1.08e-08!13;UBERON:0006554!2.13e-08!44;UBERON:0000483!2.26e-08!309;UBERON:0005172!2.99e-08!55;UBERON:0005173!2.99e-08!55;UBERON:0000119!4.11e-08!312;UBERON:0001008!4.33e-08!45;UBERON:0000477!4.34e-08!286;UBERON:0004573!1.06e-07!33;UBERON:0004571!1.06e-07!33;UBERON:0003064!1.23e-07!37;UBERON:0003076!1.37e-07!15;UBERON:0003057!1.37e-07!15;UBERON:0002385!2.02e-07!63;UBERON:0001015!2.02e-07!63;UBERON:0000383!2.02e-07!63;UBERON:0000475!2.97e-07!365;UBERON:0004237!3.93e-07!10;UBERON:0004695!3.93e-07!10;UBERON:0002111!3.93e-07!10;UBERON:0004178!3.93e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;2.71e-26;10!UBERON:0009773;2.71e-26;10!UBERON:0001231;2.71e-26;10!UBERON:0004810;2.71e-26;10!UBERON:0006555;5.23e-25;15!UBERON:0004819;5.23e-25;15!UBERON:0001285;5.23e-25;15!UBERON:0007684;5.23e-25;15!UBERON:0002113;9.66e-18;24!UBERON:0011143;9.66e-18;24!UBERON:0001225;1.90e-16;12!UBERON:0008987;1.90e-16;12!UBERON:0000489;3.26e-14;29!UBERON:0006554;1.19e-13;30!UBERON:0001008;1.19e-13;30!UBERON:0001851;6.93e-13;15!UBERON:0000353;6.93e-13;15!UBERON:0002417;3.94e-09;58!UBERON:0000916;3.94e-09;58!UBERON:0003688;4.13e-09;6!UBERON:0002358;4.13e-09;6!UBERON:0003684;4.13e-09;6!UBERON:0001178;4.13e-09;6!UBERON:0004237;2.85e-08;10!UBERON:0004695;2.85e-08;10!UBERON:0002111;2.85e-08;10!UBERON:0004178;2.85e-08;10!UBERON:0003567;7.34e-08;2!UBERON:0003838;7.34e-08;2!UBERON:0003586;7.34e-08;2!UBERON:0005169;7.34e-08;2!UBERON:0002321;7.34e-08;2!UBERON:0005215;7.34e-08;2!UBERON:0002303;7.34e-08;2!UBERON:0002319;7.34e-08;2!UBERON:0000074;1.05e-07;7!UBERON:0001229;1.05e-07;7!UBERON:0003914;1.32e-07;74!UBERON:0007196;1.71e-07;15!UBERON:0001558;1.71e-07;15!UBERON:0005177;4.24e-07;99!UBERON:0009569;8.11e-07;110!UBERON:0005172;8.17e-07;52!UBERON:0005173;8.17e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,1.94e-26,10;UBERON:0004211,2.93e-25,15;UBERON:0009773,2.93e-25,15;UBERON:0001231,2.93e-25,15;UBERON:0001285,2.93e-25,15;UBERON:0007684,2.93e-25,15;UBERON:0004208,2.93e-25,15;UBERON:0006555,1.58e-23,16;UBERON:0004819,1.58e-23,16;UBERON:0009569,8.21e-18,112;UBERON:0001225,1.44e-16,12;UBERON:0008987,1.44e-16,12;UBERON:0002113,2.47e-16,26;UBERON:0003918,2.47e-16,26;UBERON:0011143,2.47e-16,26;UBERON:0005095,2.47e-16,26;UBERON:0007687,2.47e-16,26;UBERON:0002100,6.03e-14,199;UBERON:0002417,1.14e-13,60;UBERON:0000916,1.14e-13,60;UBERON:0000489,2.93e-13,31;UBERON:0003914,5.29e-13,117;UBERON:0001851,5.56e-13,15;UBERON:0000353,5.56e-13,15;UBERON:0005177,1.22e-11,101;UBERON:0000025,7.94e-10,192;UBERON:0003104,1.75e-09,160;UBERON:0009142,1.75e-09,160;UBERON:0006554,3.11e-09,47;UBERON:0003688,4.66e-09,6;UBERON:0002358,4.66e-09,6;UBERON:0003684,4.66e-09,6;UBERON:0001178,4.66e-09,6;UBERON:0005172,5.00e-09,54;UBERON:0005173,5.00e-09,54;UBERON:0001008,5.55e-09,48;UBERON:0004237,1.90e-08,10;UBERON:0004695,1.90e-08,10;UBERON:0002111,1.90e-08,10;UBERON:0004178,1.90e-08,10;UBERON:0007503,2.10e-08,78;UBERON:0003567,5.79e-08,2;UBERON:0003838,5.79e-08,2;UBERON:0003586,5.79e-08,2;UBERON:0005169,5.79e-08,2;UBERON:0002321,5.79e-08,2;UBERON:0005215,5.79e-08,2;UBERON:0002303,5.79e-08,2;UBERON:0002319,5.79e-08,2;UBERON:0010532,7.31e-08,7;UBERON:0000074,7.31e-08,7;UBERON:0001229,7.31e-08,7;UBERON:0001230,7.31e-08,7;UBERON:0003220,7.31e-08,7;UBERON:0005749,7.31e-08,7;UBERON:0004199,7.31e-08,7;UBERON:0004209,7.31e-08,7;UBERON:0004198,7.31e-08,7;UBERON:0003103,9.21e-08,68;UBERON:0007196,2.11e-07,15;UBERON:0001558,2.11e-07,15;UBERON:0004111,4.92e-07,240;UBERON:0005103,7.03e-07,8;UBERON:0000083,7.03e-07,8;UBERON:0009201,7.03e-07,8;UBERON:0006553,7.03e-07,8;UBERON:0003074,7.03e-07,8;UBERON:0003060,7.03e-07,8;UBERON:0004573,7.11e-07,33;UBERON:0004571,7.11e-07,33 | |||
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| ||
|short_description=p@chr7:27157970..27157995,- | |||
}} | }} |
Latest revision as of 09:01, 31 July 2015
Short description: | p@chr7:27157970..27157995, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:27157970..27157995, - |
Coexpression cluster: | C4678_Smooth_Mesothelial_glioma_mesenchymal_Renal_liposarcoma_Hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 1.87e-26 | 17 |
kidney epithelial cell | 1.87e-26 | 17 |
kidney tubule cell | 1.94e-26 | 10 |
nephron tubule epithelial cell | 1.94e-26 | 10 |
epithelial cell of nephron | 2.93e-25 | 15 |
kidney cortical cell | 1.44e-16 | 12 |
renal cortical epithelial cell | 1.44e-16 | 12 |
omentum preadipocyte | 7.46e-11 | 3 |
smooth muscle cell | 2.06e-10 | 43 |
smooth muscle myoblast | 2.06e-10 | 43 |
aortic smooth muscle cell | 1.90e-08 | 10 |
mesangial cell | 5.79e-08 | 2 |
kidney interstitial cell | 5.79e-08 | 2 |
juxtaglomerular complex cell | 5.79e-08 | 2 |
renal interstitial pericyte | 5.79e-08 | 2 |
extraglomerular mesangial cell | 5.79e-08 | 2 |
glomerular cell | 7.31e-08 | 7 |
kidney corpuscule cell | 7.31e-08 | 7 |
muscle cell | 1.59e-07 | 55 |
mesodermal cell | 3.05e-07 | 121 |
bronchial smooth muscle cell | 3.41e-07 | 2 |
muscle precursor cell | 5.38e-07 | 58 |
myoblast | 5.38e-07 | 58 |
multi-potent skeletal muscle stem cell | 5.38e-07 | 58 |