FFCP PHASE1:Hg19::chr5:57878859..57878872,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:57878859..57878872,+ to FFCP PHASE1:Hg19::chr5:57878859..57878872,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=115827 | |EntrezGene=115827 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30269 | |HGNC=30269 | ||
|TSSclassifier=strong | |||
|UniProt=Q96E17 | |UniProt=Q96E17 | ||
|association_with_transcript=0bp_to_ENST00000282878_5end | |||
|cluster_id=chr5:57878859..57878872,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_4_at_RAB3C_5end | |||
|id=chr5:57878859..57878872,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.16e-23;82!UBERON:0006215;3.99e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;4.90e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,5.38e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0001017!3.30e-69!82;UBERON:0001049!7.53e-68!57;UBERON:0005068!7.53e-68!57;UBERON:0006241!7.53e-68!57;UBERON:0007135!7.53e-68!57;UBERON:0000073!1.38e-67!94;UBERON:0001016!1.38e-67!94;UBERON:0005743!4.27e-67!86;UBERON:0000955!3.87e-57!69;UBERON:0006238!3.87e-57!69;UBERON:0002616!4.88e-57!59;UBERON:0002780!1.06e-56!41;UBERON:0001890!1.06e-56!41;UBERON:0006240!1.06e-56!41;UBERON:0003080!4.89e-55!42;UBERON:0007023!1.99e-52!115;UBERON:0003075!4.05e-48!86;UBERON:0007284!4.05e-48!86;UBERON:0002346!8.13e-47!90;UBERON:0002020!3.68e-46!34;UBERON:0003528!3.68e-46!34;UBERON:0001893!3.91e-46!34;UBERON:0002791!1.65e-44!33;UBERON:0001869!8.85e-44!32;UBERON:0003056!1.85e-37!61;UBERON:0002619!9.15e-36!22;UBERON:0000956!4.48e-33!25;UBERON:0000203!4.48e-33!25;UBERON:0001950!1.05e-32!20;UBERON:0004121!2.10e-32!169;UBERON:0000924!3.42e-32!173;UBERON:0006601!3.42e-32!173;UBERON:0000033!6.17e-28!123;UBERON:0000153!8.29e-26!129;UBERON:0007811!8.29e-26!129;UBERON:0000025!3.31e-16!194;UBERON:0002420!1.00e-14!9;UBERON:0007245!1.00e-14!9;UBERON:0010009!1.00e-14!9;UBERON:0010011!1.00e-14!9;UBERON:0000454!1.00e-14!9;UBERON:0002308!2.25e-14!9;UBERON:0000125!2.25e-14!9;UBERON:0003076!1.06e-13!15;UBERON:0003057!1.06e-13!15;UBERON:0001871!3.51e-13!7;UBERON:0001894!9.39e-12!7;UBERON:0006222!9.39e-12!7;UBERON:0004111!1.12e-11!241;UBERON:0009663!1.46e-11!7;UBERON:0004732!2.62e-11!13;UBERON:0000200!1.34e-10!6;UBERON:0004733!3.50e-10!12;UBERON:0002028!3.50e-10!12;UBERON:0007277!3.50e-10!12;UBERON:0000349!1.90e-09!5;UBERON:0002298!2.06e-09!8;UBERON:0002021!5.16e-09!5;UBERON:0001872!6.67e-09!5;UBERON:0000483!1.55e-08!309;UBERON:0000922!2.19e-08!612;UBERON:0000119!2.79e-08!312;UBERON:0000064!2.95e-08!219;UBERON:0000369!6.55e-08!4;UBERON:0002435!6.55e-08!4;UBERON:0000204!6.55e-08!4;UBERON:0010082!6.55e-08!4;UBERON:0000477!1.03e-07!286;UBERON:0003296!2.63e-07!4;UBERON:0010133!2.63e-07!4;UBERON:0000923!9.53e-07!604;UBERON:0005291!9.53e-07!604;UBERON:0006598!9.53e-07!604;UBERON:0002532!9.53e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.01e-62;32!UBERON:0002780;2.38e-62;41!UBERON:0001890;2.38e-62;41!UBERON:0003528;5.24e-60;34!UBERON:0002020;5.24e-60;34!UBERON:0001893;7.42e-60;34!UBERON:0002619;2.25e-59;22!UBERON:0002791;8.35e-59;32!UBERON:0000073;9.56e-57;53!UBERON:0002616;9.56e-57;53!UBERON:0001950;3.33e-54;20!UBERON:0000956;9.97e-52;25!UBERON:0000203;9.97e-52;25!UBERON:0000955;2.89e-42;68!UBERON:0001017;1.63e-40;75!UBERON:0001016;9.07e-37;83!UBERON:0002420;1.86e-19;9!UBERON:0007245;1.86e-19;9!UBERON:0010009;1.86e-19;9!UBERON:0010011;1.86e-19;9!UBERON:0000454;1.86e-19;9!UBERON:0000125;6.47e-19;9!UBERON:0002308;6.47e-19;9!UBERON:0001871;6.74e-19;6!UBERON:0004732;8.65e-19;13!UBERON:0001894;9.07e-19;7!UBERON:0004733;7.28e-17;12!UBERON:0002028;7.28e-17;12!UBERON:0000200;8.44e-17;6!UBERON:0002298;1.08e-15;6!UBERON:0000349;8.67e-15;5!UBERON:0007023;1.35e-14;114!UBERON:0009663;2.93e-14;7!UBERON:0002021;4.46e-14;5!UBERON:0001872;5.77e-14;5!UBERON:0011216;1.79e-13;132!UBERON:0000369;3.01e-12;4!UBERON:0002435;3.01e-12;4!UBERON:0000204;3.01e-12;4!UBERON:0003296;2.86e-11;4!UBERON:0010133;2.86e-11;4!UBERON:0002784;3.94e-11;4!UBERON:0002680;9.23e-11;9!UBERON:0001895;9.23e-11;9!UBERON:0005383;1.55e-09;3!UBERON:0005382;1.55e-09;3!UBERON:0001870;2.30e-09;3!UBERON:0000988;4.10e-09;3!UBERON:0010314;5.31e-09;132!UBERON:0001896;2.79e-08;3!UBERON:0005290;2.79e-08;3!UBERON:0001876;5.16e-07;2!UBERON:0004121;8.72e-07;165 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,7.12e-106,56;UBERON:0005068,7.12e-106,56;UBERON:0006241,7.12e-106,56;UBERON:0007135,7.12e-106,56;UBERON:0000073,2.59e-103,53;UBERON:0002616,2.59e-103,53;UBERON:0001016,2.69e-101,89;UBERON:0001017,5.77e-99,81;UBERON:0000955,2.43e-95,68;UBERON:0006238,2.43e-95,68;UBERON:0002780,2.72e-87,41;UBERON:0001890,2.72e-87,41;UBERON:0003080,2.72e-87,41;UBERON:0006240,2.72e-87,41;UBERON:0003075,1.74e-74,82;UBERON:0007284,1.74e-74,82;UBERON:0002346,1.97e-70,86;UBERON:0001869,1.02e-69,32;UBERON:0003528,1.36e-69,34;UBERON:0002020,1.36e-69,34;UBERON:0001893,1.50e-69,34;UBERON:0002791,1.09e-64,32;UBERON:0003056,1.00e-61,61;UBERON:0002619,2.52e-59,22;UBERON:0010371,2.24e-58,104;UBERON:0001950,3.88e-54,20;UBERON:0000956,1.10e-51,25;UBERON:0000203,1.10e-51,25;UBERON:0004121,4.13e-48,171;UBERON:0000924,4.13e-48,171;UBERON:0006601,4.13e-48,171;UBERON:0007023,1.86e-44,114;UBERON:0010314,1.96e-43,132;UBERON:0011216,2.62e-39,223;UBERON:0000025,1.26e-25,192;UBERON:0003076,1.98e-19,15;UBERON:0003057,1.98e-19,15;UBERON:0002420,2.07e-19,9;UBERON:0007245,2.07e-19,9;UBERON:0010009,2.07e-19,9;UBERON:0010011,2.07e-19,9;UBERON:0000454,2.07e-19,9;UBERON:0001871,6.93e-19,6;UBERON:0000125,7.04e-19,9;UBERON:0002308,7.04e-19,9;UBERON:0004732,8.92e-19,13;UBERON:0001894,1.04e-18,7;UBERON:0006222,1.04e-18,7;UBERON:0004111,7.28e-18,240;UBERON:0004733,7.28e-17,12;UBERON:0002028,7.28e-17,12;UBERON:0007277,7.28e-17,12;UBERON:0000200,9.17e-17,6;UBERON:0002298,1.14e-15,6;UBERON:0000349,7.87e-15,5;UBERON:0009663,3.41e-14,7;UBERON:0000483,3.84e-14,306;UBERON:0002021,4.23e-14,5;UBERON:0001872,6.52e-14,5;UBERON:0000119,7.13e-14,309;UBERON:0000369,3.02e-12,4;UBERON:0002435,3.02e-12,4;UBERON:0000204,3.02e-12,4;UBERON:0010082,3.02e-12,4;UBERON:0003296,3.10e-11,4;UBERON:0010133,3.10e-11,4;UBERON:0002784,4.50e-11,4;UBERON:0002680,8.32e-11,9;UBERON:0001895,8.32e-11,9;UBERON:0010092,8.32e-11,9;UBERON:0005383,1.56e-09,3;UBERON:0005382,1.56e-09,3;UBERON:0001870,2.36e-09,3;UBERON:0000988,3.68e-09,3;UBERON:0001896,3.26e-08,3;UBERON:0005290,3.26e-08,3;UBERON:0010096,3.26e-08,3;UBERON:0000923,6.12e-08,560;UBERON:0010316,6.12e-08,560;UBERON:0005291,6.12e-08,560;UBERON:0006598,6.12e-08,560;UBERON:0010317,6.12e-08,560;UBERON:0002532,6.12e-08,560;UBERON:0002050,9.03e-08,564;UBERON:0000922,3.60e-07,592;UBERON:0005423,4.45e-07,581;UBERON:0001876,4.87e-07,2;UBERON:0001954,9.62e-07,2;UBERON:0003022,9.62e-07,2;UBERON:0002421,9.62e-07,2;UBERON:0002600,9.62e-07,2 | |||
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|short_description=p4@RAB3C | |||
}} | }} |
Latest revision as of 06:31, 18 September 2015
Short description: | p4@RAB3C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RAB3C_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000282878_5end |
EntrezGene: | RAB3C |
HGNC: | 30269 |
UniProt: | Q96E17 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 5.38e-07 | 6 |