FFCP PHASE1:Hg19::chr5:169931175..169931233,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:169931175..169931233,+ to FFCP PHASE1:Hg19::chr5:169931175..169931233,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=30820 | |EntrezGene=30820 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15521 | |HGNC=15521 | ||
|TSSclassifier=strong | |||
|UniProt=Q3YAD2,Q3YAD1,Q9NZI2 | |UniProt=Q3YAD2,Q3YAD1,Q9NZI2 | ||
|association_with_transcript=127bp_to_ENST00000390656,NM_001034837,NM_014592,uc003mas.2,uc003mat.2,uc010jjp.2,uc010jjq.2_5end | |||
|cluster_id=chr5:169931175..169931233,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_KCNIP1_5end | |||
|id=chr5:169931175..169931233,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.10e-18;82!UBERON:0006241;1.41e-09;3!UBERON:0003057;1.41e-09;3!UBERON:0006215;3.87e-09;3!UBERON:0010122;6.27e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.90e-71!57;UBERON:0005068!1.90e-71!57;UBERON:0006241!1.90e-71!57;UBERON:0007135!1.90e-71!57;UBERON:0001017!6.29e-68!82;UBERON:0005743!6.03e-66!86;UBERON:0000073!1.80e-61!94;UBERON:0001016!1.80e-61!94;UBERON:0000955!2.53e-61!69;UBERON:0006238!2.53e-61!69;UBERON:0002616!1.04e-59!59;UBERON:0002780!2.97e-55!41;UBERON:0001890!2.97e-55!41;UBERON:0006240!2.97e-55!41;UBERON:0003080!1.32e-53!42;UBERON:0003075!3.48e-53!86;UBERON:0007284!3.48e-53!86;UBERON:0002346!6.94e-50!90;UBERON:0001893!3.56e-47!34;UBERON:0002020!4.13e-47!34;UBERON:0003528!4.13e-47!34;UBERON:0002791!1.16e-45!33;UBERON:0001869!1.24e-44!32;UBERON:0007023!2.15e-44!115;UBERON:0003056!1.92e-39!61;UBERON:0000153!1.22e-36!129;UBERON:0007811!1.22e-36!129;UBERON:0000033!1.26e-35!123;UBERON:0004121!1.10e-34!169;UBERON:0000956!2.00e-34!25;UBERON:0000203!2.00e-34!25;UBERON:0000924!2.55e-33!173;UBERON:0006601!2.55e-33!173;UBERON:0002619!1.98e-31!22;UBERON:0001950!1.30e-28!20;UBERON:0000025!5.80e-24!194;UBERON:0004111!9.48e-20!241;UBERON:0003076!4.20e-18!15;UBERON:0003057!4.20e-18!15;UBERON:0000477!3.57e-17!286;UBERON:0000064!1.62e-16!219;UBERON:0004732!4.15e-15!13;UBERON:0002420!2.61e-14!9;UBERON:0007245!2.61e-14!9;UBERON:0010009!2.61e-14!9;UBERON:0010011!2.61e-14!9;UBERON:0000454!2.61e-14!9;UBERON:0000483!3.25e-14!309;UBERON:0004733!5.96e-14!12;UBERON:0002028!5.96e-14!12;UBERON:0007277!5.96e-14!12;UBERON:0002308!6.28e-14!9;UBERON:0000125!6.28e-14!9;UBERON:0000119!7.56e-14!312;UBERON:0000475!5.06e-13!365;UBERON:0009663!2.82e-11!7;UBERON:0000200!4.67e-10!6;UBERON:0001871!5.47e-10!7;UBERON:0002680!5.51e-10!9;UBERON:0001895!5.51e-10!9;UBERON:0010092!5.51e-10!9;UBERON:0000062!5.58e-10!511;UBERON:0000481!6.44e-10!347;UBERON:0001894!2.60e-09!7;UBERON:0006222!2.60e-09!7;UBERON:0002298!2.85e-09!8;UBERON:0000349!6.10e-09!5;UBERON:0002021!8.45e-09!5;UBERON:0001872!9.41e-09!5;UBERON:0000468!2.62e-08!659;UBERON:0000922!6.03e-08!612;UBERON:0000467!6.37e-08!625;UBERON:0000480!7.40e-08!626;UBERON:0000369!1.97e-07!4;UBERON:0002435!1.97e-07!4;UBERON:0000204!1.97e-07!4;UBERON:0010082!1.97e-07!4;UBERON:0002050!9.68e-07!605;UBERON:0005423!9.68e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;5.67e-63;34!UBERON:0003528;2.48e-62;34!UBERON:0002020;2.48e-62;34!UBERON:0001869;5.97e-62;32!UBERON:0002791;1.34e-61;32!UBERON:0002619;3.75e-58;22!UBERON:0002780;8.90e-55;41!UBERON:0001890;8.90e-55;41!UBERON:0001950;8.16e-53;20!UBERON:0000073;2.13e-52;53!UBERON:0002616;2.13e-52;53!UBERON:0000956;1.09e-50;25!UBERON:0000203;1.09e-50;25!UBERON:0001017;3.29e-39;75!UBERON:0000955;5.30e-37;68!UBERON:0001016;1.87e-32;83!UBERON:0002420;1.53e-25;9!UBERON:0007245;1.53e-25;9!UBERON:0010009;1.53e-25;9!UBERON:0010011;1.53e-25;9!UBERON:0000454;1.53e-25;9!UBERON:0000125;8.81e-25;9!UBERON:0002308;8.81e-25;9!UBERON:0009663;7.80e-20;7!UBERON:0004732;9.23e-20;13!UBERON:0004733;1.11e-17;12!UBERON:0002028;1.11e-17;12!UBERON:0000200;2.07e-17;6!UBERON:0002298;9.39e-17;6!UBERON:0000349;2.01e-15;5!UBERON:0001871;3.24e-15;6!UBERON:0002021;3.60e-15;5!UBERON:0001872;5.63e-15;5!UBERON:0007023;3.40e-14;114!UBERON:0000369;1.36e-12;4!UBERON:0002435;1.36e-12;4!UBERON:0000204;1.36e-12;4!UBERON:0011216;3.70e-12;132!UBERON:0002680;8.31e-11;9!UBERON:0001895;8.31e-11;9!UBERON:0005383;8.23e-10;3!UBERON:0005382;8.23e-10;3!UBERON:0001870;1.07e-09;3!UBERON:0002240;1.41e-09;3!UBERON:0005174;1.41e-09;3!UBERON:0001137;1.41e-09;3!UBERON:0001896;2.53e-09;3!UBERON:0005290;2.53e-09;3!UBERON:0000988;3.93e-09;3!UBERON:0010314;1.05e-08;132!UBERON:0001876;2.05e-07;2!UBERON:0001873;6.27e-07;2!UBERON:0001954;6.65e-07;2!UBERON:0003022;6.65e-07;2!UBERON:0002421;6.65e-07;2!UBERON:0002600;6.65e-07;2!UBERON:0002702;6.75e-07;2!UBERON:0001875;8.51e-07;2!UBERON:0006514;8.51e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,9.38e-103,56;UBERON:0005068,9.38e-103,56;UBERON:0006241,9.38e-103,56;UBERON:0007135,9.38e-103,56;UBERON:0000073,1.57e-94,53;UBERON:0002616,1.57e-94,53;UBERON:0001017,1.75e-90,81;UBERON:0000955,3.16e-85,68;UBERON:0006238,3.16e-85,68;UBERON:0001016,2.03e-83,89;UBERON:0002780,2.54e-77,41;UBERON:0001890,2.54e-77,41;UBERON:0003080,2.54e-77,41;UBERON:0006240,2.54e-77,41;UBERON:0001893,1.75e-74,34;UBERON:0003528,2.26e-74,34;UBERON:0002020,2.26e-74,34;UBERON:0001869,1.03e-69,32;UBERON:0003075,1.38e-69,82;UBERON:0007284,1.38e-69,82;UBERON:0002791,3.34e-69,32;UBERON:0002346,8.44e-66,86;UBERON:0002619,2.67e-58,22;UBERON:0010371,1.12e-54,104;UBERON:0001950,5.73e-53,20;UBERON:0003056,4.70e-52,61;UBERON:0000956,8.07e-51,25;UBERON:0000203,8.07e-51,25;UBERON:0007023,5.87e-47,114;UBERON:0010314,1.55e-42,132;UBERON:0004121,3.46e-39,171;UBERON:0000924,3.46e-39,171;UBERON:0006601,3.46e-39,171;UBERON:0011216,1.41e-29,223;UBERON:0002420,1.72e-25,9;UBERON:0007245,1.72e-25,9;UBERON:0010009,1.72e-25,9;UBERON:0010011,1.72e-25,9;UBERON:0000454,1.72e-25,9;UBERON:0000025,3.53e-25,192;UBERON:0003076,4.54e-25,15;UBERON:0003057,4.54e-25,15;UBERON:0000125,8.95e-25,9;UBERON:0002308,8.95e-25,9;UBERON:0009663,8.75e-20,7;UBERON:0004732,9.74e-20,13;UBERON:0004111,1.17e-18,240;UBERON:0004733,1.19e-17,12;UBERON:0002028,1.19e-17,12;UBERON:0007277,1.19e-17,12;UBERON:0000200,1.70e-17,6;UBERON:0002298,9.27e-17,6;UBERON:0000349,2.10e-15,5;UBERON:0001871,2.54e-15,6;UBERON:0002021,3.87e-15,5;UBERON:0001872,4.74e-15,5;UBERON:0000483,2.06e-13,306;UBERON:0000119,3.70e-13,309;UBERON:0000369,1.40e-12,4;UBERON:0002435,1.40e-12,4;UBERON:0000204,1.40e-12,4;UBERON:0010082,1.40e-12,4;UBERON:0002680,8.70e-11,9;UBERON:0001895,8.70e-11,9;UBERON:0010092,8.70e-11,9;UBERON:0005383,8.24e-10,3;UBERON:0005382,8.24e-10,3;UBERON:0001870,1.01e-09,3;UBERON:0002240,1.27e-09,3;UBERON:0005174,1.27e-09,3;UBERON:0001137,1.27e-09,3;UBERON:0001896,2.61e-09,3;UBERON:0005290,2.61e-09,3;UBERON:0010096,2.61e-09,3;UBERON:0000988,3.77e-09,3;UBERON:0001876,2.05e-07,2;UBERON:0001873,6.01e-07,2;UBERON:0010122,6.01e-07,2;UBERON:0002702,6.56e-07,2;UBERON:0001954,6.75e-07,2;UBERON:0003022,6.75e-07,2;UBERON:0002421,6.75e-07,2;UBERON:0002600,6.75e-07,2;UBERON:0001875,9.83e-07,2;UBERON:0006514,9.83e-07,2 | |||
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| ||
|short_description=p2@KCNIP1 | |||
}} | }} |
Latest revision as of 22:15, 16 September 2015
Short description: | p2@KCNIP1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KCNIP1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 127bp_to_ENST00000390656, NM_001034837, NM_014592, uc003mas.2, uc003mat.2, uc010jjp.2, uc010jjq.2_5end |
EntrezGene: | KCNIP1 |
HGNC: | 15521 |
UniProt: | Q3YAD2Q3YAD1Q9NZI2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data