FFCP PHASE1:Hg19::chr4:120548878..120548899,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:120548878..120548899,- to FFCP PHASE1:Hg19::chr4:120548878..120548899,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8654 | |EntrezGene=8654 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8784 | |HGNC=8784 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-90bp_to_ENST00000264805_5end | |||
|cluster_id=chr4:120548878..120548899,- | |||
|coexpression_cluster_id=C1271 | |||
|description=CAGE_peak_9_at_PDE5A_5end | |||
|id=chr4:120548878..120548899,- | |||
|ontology_enrichment_celltype=CL:0000057!3.99e-13!75;CL:0000055!1.91e-10!180 | |||
|ontology_enrichment_celltype_v019=CL:0002622;8.62e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.82e-08,76;CL:0002622,8.26e-08,3;CL:0002564,8.74e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.46e-13!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;6.03e-11;17!UBERON:0000059;6.04e-10;11!UBERON:0003101;1.55e-09;22!UBERON:0000079;1.55e-09;22!UBERON:0001155;2.81e-09;9!UBERON:0003937;3.28e-08;12!UBERON:0005399;3.28e-08;12!UBERON:0005409;5.11e-08;22!UBERON:0002367;5.37e-07;11!UBERON:0010147;5.37e-07;11!UBERON:0000075;7.36e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.89e-11,17;UBERON:0000059,2.88e-10,11;UBERON:0001155,1.28e-09,9;UBERON:0003101,1.36e-09,22;UBERON:0000079,1.36e-09,22;UBERON:0003937,3.30e-08,12;UBERON:0005399,3.30e-08,12;UBERON:0011137,3.38e-08,14;UBERON:0001046,5.83e-08,19;UBERON:0007023,1.36e-07,114;UBERON:0001007,1.83e-07,145;UBERON:0001555,1.83e-07,145;UBERON:0007026,1.83e-07,145;UBERON:0005409,5.11e-07,25;UBERON:0002367,5.25e-07,11;UBERON:0010147,5.25e-07,11;UBERON:0009846,5.25e-07,11;UBERON:0003353,5.25e-07,11;UBERON:0004902,5.25e-07,11;UBERON:0003820,5.25e-07,11;UBERON:0009847,5.25e-07,11;UBERON:0000162,5.34e-07,14;UBERON:0001353,5.34e-07,14;UBERON:0000163,5.34e-07,14;UBERON:0006866,5.34e-07,14;UBERON:0000164,5.34e-07,14;UBERON:0000931,5.34e-07,14;UBERON:0000075,5.61e-07,16;UBERON:0002242,8.74e-07,3;UBERON:0003068,8.74e-07,3;UBERON:0002328,8.74e-07,3;UBERON:0004880,8.74e-07,3 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.704772020479856,0,0,0.872338524100369,0,0,0,0.245733936501509,0,0,0,0.866364470720326,0.994192127183747,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,2.00535164254356,0.724232594804119,0,0,0.189069634328136,0,0.087834785693126,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0.496971951695318,1.8994576749687,0.529636723252875,2.29469296599051,0.709336764396714,1.12135520028461,0,0.49333509683432,0,0.404132016209064,0.163461903113459,0,0,0.234321431833797,0,0,0,0,0,0,0.408308342509787,0.368502951935304,0.619954687054593,3.56400857184616,4.94533858557114,0,1.43723628363248,0.505008341862199,0.750711119231785,1.10825646193673,6.58466431321257,6.12975591598039,3.45547535485173,0.113432183160021,0.89694817844431,1.2813443329114,0.423863802319124,1.80054657650641,0.721367704669072,0.257640540045629,0.558350568994769,0,0.194874010322397,1.26216887122057,1.10459878370759,7.11242650002772,1.06502877754984,0.503760491138201,1.18692414617341,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,1.20097467208968,0,0,0,0,0,0,0,0,0.352226082707465,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0.144119953416961,0.25248486685276,0,0,0,0,0,0.300343057843917,0,0.112131084345361,0,0.07333828582095,0.517086863031111,0,0,1.06375246633948,2.08014873822732,0,0,0,2.43062589218851,0,0,0,2.84313558994037,0,0,0,0.399891964728228,0,0,0,1.19812427745791,1.14861935834114,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0.828831026872071,2.4538298343828,1.50051156317903,2.98391526069709,0.623912584592421,0.178428988797162,0.157702415033935,1.05427273493442,0.300946099727719,0,0,0.664225598535437,0.184369168541703,0.781952530212746,0.195801157462741,0,0.206768026122887,0,0,0,0,0,0.744323423456331,0.920771839728375,0.561320188866147,2.05022638809122,1.02341449813341,1.93024705372329,1.48418066444991,0.154209693802656,0,0.328508624055237,3.11552657510173,0.116210378459959,0,0,0,5.0518357192427,6.91946438425525,7.99858931252487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0.457847324091717,0.577566499444116,0,0,0,0,0.154048617114644,0,0,0.322260734604821,0,0.170453254832202,0.445160178233687,0,0,0,0,2.32422774648643,0.62962469366128,0.6970372701606,0,0.532306030317022,0,0,1.00187420719394,0,0,0.38126038784765,0.255897791311334,1.71175595213568,0.318203247925937,0,1.43897966066652,2.19629623788844,1.88499843753098,0,1.58510321173008,0,0,0.487426979262569,0,4.50449707646353,4.66637925447252,0,1.65409603063837,0.66343897524122,0,0.578775534266688,0.655894752046633,0.405820753925408,0.30982349809975,0.281695602532241,0,0,0,1.06428319221179,0.422215270595328,1.31717957183961,0,0,0,0,0,0.376575203107117,0,0,0,0,0.507447609232169,2.29391162142713,1.13929437434833,1.42939065274673,1.64544909234478,1.29694662238543,2.16012574895246,3.17250070517708,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935702702041099,0.879049075631364,0,0,0,0,0,0,0,0,0,0,0.211125408127993,6.37593562403423,2.48655523978033,0,0.20453736500431,0,0.311039587661807,0,0,0,2.26879832964947,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0.442317039724898,0,0.438770794307945,0,1.53366118706464,2.38545801361771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,1.99052386215701,1.32686346755009,1.22206028986725,0,0,0,0,3.21031058919516,0.234264445725339,0,0,0,2.36750641709634,1.20990716048664,0,3.47526187956684,0,0.103688191397247,0,0,0,0,0,0,0,0,0,2.44617335538842,0,0,0,0,1.84279131327997,0,1.12990370390266,0,0,0.126621591911757,0,0,1.06726497369676,0.599428828746391,0,0,0,0,0,0,0.135904206073614,0.313808538937,7.24187345217885,0,0,0,0,1.71906176567983,0,3.35138881526705,8.02061484040893,0,0,0.429226048136571,0.223171457441873,2.08268764708851,2.16179930125442,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.472834243795189,1.20645552710496,0,0,0,0.714695326373367,0,0,0.542999601753713,0,0.326587360109409,0,0,0,1.58636928128176,0,0,0.129282956361551,0,0,0,1.70859860108311,4.40172054279065,0.828478110694391,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0.1251909307065,0,0.110929051536852,0.310482014706917,0,0,0,0,0,0,0,0,0.233713309847224,0,0.947015026375446,2.51567901752575,1.77962244319307,0.228840068396924,0.453692771289717,0.621748802331122,0,0.318593534327405,0,0.310525913752519,0,0.265841714557995,0,0.300515217994437,0.380805212168795,0,0.181848659202559,0.322231671127465,0,0.398095888698616,0,0.343395705182793,0,0,0,0,0,1.36023555307363,0,0.244736704506468,0,0,0.657852148736121,0,0.192914038270915,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,1.76337971845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| 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| ||
|short_description=p9@PDE5A | |||
}} | }} |
Latest revision as of 22:56, 24 September 2015
Short description: | p9@PDE5A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_PDE5A_5end |
Coexpression cluster: | C1271_Prostate_sacrococcigeal_glioblastoma_penis_Fibroblast_Smooth_aorta |
Association with transcript: | -90bp_to_ENST00000264805_5end |
EntrezGene: | PDE5A |
HGNC: | 8784 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.82e-08 | 76 |
prostate stromal cell | 8.26e-08 | 3 |
nucleus pulposus cell of intervertebral disc | 8.74e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.89e-11 | 17 |
large intestine | 2.88e-10 | 11 |
colon | 1.28e-09 | 9 |
male organism | 1.36e-09 | 22 |
male reproductive system | 1.36e-09 | 22 |
sex gland | 3.30e-08 | 12 |
male reproductive gland | 3.30e-08 | 12 |
axial skeletal system | 3.38e-08 | 14 |
hindgut | 5.83e-08 | 19 |
adult organism | 1.36e-07 | 114 |
digestive system | 1.83e-07 | 145 |
digestive tract | 1.83e-07 | 145 |
primitive gut | 1.83e-07 | 145 |
gastrointestinal system | 5.11e-07 | 25 |
prostate gland | 5.25e-07 | 11 |
male accessory sex gland | 5.25e-07 | 11 |
embryonic cloacal epithelium | 5.25e-07 | 11 |
epithelium of hindgut | 5.25e-07 | 11 |
urogenital sinus epithelium | 5.25e-07 | 11 |
prostate bud | 5.25e-07 | 11 |
prostate field | 5.25e-07 | 11 |
cloaca | 5.34e-07 | 14 |
anal region | 5.34e-07 | 14 |
embryonic cloaca | 5.34e-07 | 14 |
terminal part of digestive tract | 5.34e-07 | 14 |
primitive urogenital sinus | 5.34e-07 | 14 |
proctodeum | 5.34e-07 | 14 |
subdivision of skeletal system | 5.61e-07 | 16 |
nucleus pulposus | 8.74e-07 | 3 |
axial mesoderm | 8.74e-07 | 3 |
notochord | 8.74e-07 | 3 |
chordamesoderm | 8.74e-07 | 3 |