FFCP PHASE1:Hg19::chr3:42190714..42190787,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:42190714..42190787,+ to FFCP PHASE1:Hg19::chr3:42190714..42190787,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22906 | |EntrezGene=22906 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29947 | |HGNC=29947 | ||
|TSSclassifier=strong | |||
|UniProt=E9PDS2 | |UniProt=E9PDS2 | ||
|association_with_transcript=0bp_to_ENST00000449246,uc003ckz.3,uc011azj.1_5end | |||
|cluster_id=chr3:42190714..42190787,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_3_at_TRAK1_5end | |||
|id=chr3:42190714..42190787,+ | |||
|ontology_enrichment_celltype=CL:0000047!4.89e-08!8 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,5.04e-09,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.51e-24;82!UBERON:0006241;4.66e-09;3!UBERON:0003057;4.66e-09;3!UBERON:0006215;1.94e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002780;1.96e-63;41!UBERON:0001890;1.96e-63;41!UBERON:0001893;5.70e-61;34!UBERON:0003528;1.43e-60;34!UBERON:0002020;1.43e-60;34!UBERON:0001869;8.83e-60;32!UBERON:0002791;1.46e-59;32!UBERON:0000073;1.77e-59;53!UBERON:0002616;1.77e-59;53!UBERON:0002619;2.43e-56;22!UBERON:0001950;4.07e-51;20!UBERON:0000956;4.32e-49;25!UBERON:0000203;4.32e-49;25!UBERON:0001017;3.38e-41;75!UBERON:0000955;6.32e-41;68!UBERON:0001016;1.99e-37;83!UBERON:0000125;2.18e-24;9!UBERON:0002308;2.18e-24;9!UBERON:0002420;7.15e-24;9!UBERON:0007245;7.15e-24;9!UBERON:0010009;7.15e-24;9!UBERON:0010011;7.15e-24;9!UBERON:0000454;7.15e-24;9!UBERON:0004732;1.32e-19;13!UBERON:0009663;3.23e-19;7!UBERON:0001894;4.49e-18;7!UBERON:0004733;4.80e-17;12!UBERON:0002028;4.80e-17;12!UBERON:0000200;7.59e-17;6!UBERON:0002298;1.34e-16;6!UBERON:0007023;6.95e-16;114!UBERON:0011216;1.19e-15;132!UBERON:0002021;3.14e-15;5!UBERON:0001872;5.05e-15;5!UBERON:0001871;2.89e-14;6!UBERON:0000349;4.06e-14;5!UBERON:0000369;7.08e-12;4!UBERON:0002435;7.08e-12;4!UBERON:0000204;7.08e-12;4!UBERON:0002784;2.37e-11;4!UBERON:0002680;1.14e-10;9!UBERON:0001895;1.14e-10;9!UBERON:0003296;1.17e-10;4!UBERON:0010133;1.17e-10;4!UBERON:0000988;1.18e-09;3!UBERON:0001870;3.15e-09;3!UBERON:0005383;3.15e-09;3!UBERON:0005382;3.15e-09;3!UBERON:0002240;4.66e-09;3!UBERON:0005174;4.66e-09;3!UBERON:0001137;4.66e-09;3!UBERON:0010314;6.63e-09;132!UBERON:0001896;1.17e-08;3!UBERON:0005290;1.17e-08;3!UBERON:0005162;4.93e-07;2!UBERON:0000122;4.93e-07;2!UBERON:0002148;7.41e-07;2!UBERON:0006331;7.41e-07;2!UBERON:0009662;7.41e-07;2!UBERON:0001954;8.55e-07;2!UBERON:0003022;8.55e-07;2!UBERON:0002421;8.55e-07;2!UBERON:0002600;8.55e-07;2!UBERON:0001875;8.80e-07;2!UBERON:0006514;8.80e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.65e-113,56;UBERON:0005068,2.65e-113,56;UBERON:0006241,2.65e-113,56;UBERON:0007135,2.65e-113,56;UBERON:0001016,1.13e-109,89;UBERON:0001017,4.13e-107,81;UBERON:0000073,2.01e-105,53;UBERON:0002616,2.01e-105,53;UBERON:0000955,2.92e-90,68;UBERON:0006238,2.92e-90,68;UBERON:0002780,2.88e-89,41;UBERON:0001890,2.88e-89,41;UBERON:0003080,2.88e-89,41;UBERON:0006240,2.88e-89,41;UBERON:0003075,3.06e-77,82;UBERON:0007284,3.06e-77,82;UBERON:0002346,4.47e-73,86;UBERON:0003528,3.69e-72,34;UBERON:0002020,3.69e-72,34;UBERON:0001893,4.75e-72,34;UBERON:0001869,4.36e-67,32;UBERON:0002791,7.37e-67,32;UBERON:0003056,1.46e-60,61;UBERON:0010371,2.92e-58,104;UBERON:0002619,2.37e-56,22;UBERON:0001950,4.07e-51,20;UBERON:0004121,5.55e-51,171;UBERON:0000924,5.55e-51,171;UBERON:0006601,5.55e-51,171;UBERON:0007023,9.24e-50,114;UBERON:0000956,4.22e-49,25;UBERON:0000203,4.22e-49,25;UBERON:0010314,2.43e-45,132;UBERON:0011216,6.23e-45,223;UBERON:0000025,1.77e-25,192;UBERON:0000125,2.47e-24,9;UBERON:0002308,2.47e-24,9;UBERON:0003076,5.95e-24,15;UBERON:0003057,5.95e-24,15;UBERON:0002420,8.09e-24,9;UBERON:0007245,8.09e-24,9;UBERON:0010009,8.09e-24,9;UBERON:0010011,8.09e-24,9;UBERON:0000454,8.09e-24,9;UBERON:0004732,1.36e-19,13;UBERON:0009663,3.56e-19,7;UBERON:0001894,4.37e-18,7;UBERON:0006222,4.37e-18,7;UBERON:0004111,7.68e-18,240;UBERON:0004733,5.05e-17,12;UBERON:0002028,5.05e-17,12;UBERON:0007277,5.05e-17,12;UBERON:0000200,8.14e-17,6;UBERON:0002298,1.38e-16,6;UBERON:0002021,3.01e-15,5;UBERON:0001872,5.19e-15,5;UBERON:0000483,2.19e-14,306;UBERON:0001871,2.96e-14,6;UBERON:0000119,4.05e-14,309;UBERON:0000349,4.06e-14,5;UBERON:0000369,7.92e-12,4;UBERON:0002435,7.92e-12,4;UBERON:0000204,7.92e-12,4;UBERON:0010082,7.92e-12,4;UBERON:0002784,2.27e-11,4;UBERON:0003296,1.17e-10,4;UBERON:0010133,1.17e-10,4;UBERON:0002680,1.18e-10,9;UBERON:0001895,1.18e-10,9;UBERON:0010092,1.18e-10,9;UBERON:0000988,1.20e-09,3;UBERON:0000923,2.48e-09,560;UBERON:0010316,2.48e-09,560;UBERON:0005291,2.48e-09,560;UBERON:0006598,2.48e-09,560;UBERON:0010317,2.48e-09,560;UBERON:0002532,2.48e-09,560;UBERON:0001870,2.98e-09,3;UBERON:0005383,3.53e-09,3;UBERON:0005382,3.53e-09,3;UBERON:0002050,3.72e-09,564;UBERON:0002240,4.79e-09,3;UBERON:0005174,4.79e-09,3;UBERON:0001137,4.79e-09,3;UBERON:0001896,1.18e-08,3;UBERON:0005290,1.18e-08,3;UBERON:0010096,1.18e-08,3;UBERON:0000922,1.45e-08,592;UBERON:0005423,1.99e-08,581;UBERON:0005162,4.65e-07,2;UBERON:0000122,4.65e-07,2;UBERON:0002148,7.62e-07,2;UBERON:0006331,7.62e-07,2;UBERON:0009662,7.62e-07,2;UBERON:0001954,8.31e-07,2;UBERON:0003022,8.31e-07,2;UBERON:0002421,8.31e-07,2;UBERON:0002600,8.31e-07,2;UBERON:0001875,8.80e-07,2;UBERON:0006514,8.80e-07,2 | |||
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| ||
|short_description=p3@TRAK1 | |||
}} | }} |
Latest revision as of 05:53, 18 September 2015
Short description: | p3@TRAK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TRAK1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000449246, uc003ckz.3, uc011azj.1_5end |
EntrezGene: | TRAK1 |
HGNC: | 29947 |
UniProt: | E9PDS2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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neuronal stem cell | 5.04e-09 | 8 |