FFCP PHASE1:Hg19::chr2:201242941..201242960,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:201242941..201242960,+ to FFCP PHASE1:Hg19::chr2:201242941..201242960,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26010 | |EntrezGene=26010 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24574 | |HGNC=24574 | ||
|TSSclassifier=strong | |||
|UniProt=F8VZ02 | |UniProt=F8VZ02 | ||
|association_with_transcript=0bp_to_ENST00000449647_5end | |||
|cluster_id=chr2:201242941..201242960,+ | |||
|description=CAGE_peak_4_at_SPATS2L_5end | |||
|id=chr2:201242941..201242960,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.10e-07!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001041;7.69e-08;30!UBERON:0006595;2.66e-07;86 | |||
|ontology_enrichment_disease=DOID:305!2.44e-17!106;DOID:0050687!4.67e-13!143;DOID:162!1.29e-07!235;DOID:14566!4.93e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:299;2.68e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.50e-16,106;DOID:0050687,4.79e-14,143;DOID:162,3.81e-09,235;DOID:14566,1.06e-08,239;DOID:299,2.62e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.09e-12!169;UBERON:0000925!2.09e-12!169;UBERON:0006595!2.09e-12!169;UBERON:0001007!3.31e-12!155;UBERON:0001555!3.31e-12!155;UBERON:0007026!3.31e-12!155;UBERON:0004921!1.56e-11!129;UBERON:0004185!1.56e-11!129;UBERON:0000077!2.80e-10!130;UBERON:0003101!5.66e-09!22;UBERON:0000079!5.66e-09!22;UBERON:0005911!2.64e-08!82;UBERON:0001046!2.78e-08!19;UBERON:0000464!7.65e-08!104;UBERON:0000466!8.53e-08!126;UBERON:0006554!2.91e-07!44;UBERON:0005409!4.32e-07!35;UBERON:0001008!6.06e-07!45;UBERON:0005153!7.39e-07!37;UBERON:0007023!9.54e-07!115;UBERON:0001004!9.69e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0000058;2.28e-13;10!UBERON:0005409;3.61e-13;22!UBERON:0004921;4.58e-12;33!UBERON:0002294;2.91e-11;7!UBERON:0001173;2.91e-11;7!UBERON:0000160;2.43e-10;17!UBERON:0002108;1.23e-07;4!UBERON:0002110;3.90e-07;3!UBERON:0006947;7.44e-07;3!UBERON:0004054;7.44e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.64e-11,25;UBERON:0000160,2.26e-10,17;UBERON:0004921,2.32e-10,118;UBERON:0001007,1.17e-09,145;UBERON:0001555,1.17e-09,145;UBERON:0007026,1.17e-09,145;UBERON:0005177,2.72e-09,101;UBERON:0002294,1.39e-08,9;UBERON:0001173,1.39e-08,9;UBERON:0004912,1.39e-08,9;UBERON:0004119,6.66e-08,160;UBERON:0000925,6.66e-08,160;UBERON:0006595,6.66e-08,160;UBERON:0002108,1.21e-07,4;UBERON:0002110,3.48e-07,3;UBERON:0006242,3.48e-07,3;UBERON:0006947,7.01e-07,3;UBERON:0004054,7.01e-07,3;UBERON:0001041,9.10e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0.247532705920093,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0.205601498999509,6.01871383406441,0,0,0,3.34231370655521,3.53527088969805,2.21533894583621,7.04090045789041,1.0247305578054,3.25148368899696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.506522046658319,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0.504641701751257,0,0,0,0,0,0,0.236613600079688,0.337169380156203,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,30.2551558816059,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0,0,0,0,0.616339038092582,0.414656231081544,0.864719720501769,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0.12269149171914,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03850885836724,0,12.0859449591622,0.200506470303285,0.0920809889358963,0.459257792658427,0.364182336013434,0,1.35359883872224,4.23584354074281,0.784349769176855,0,1.58327443339314,0,0,0,0,0,0,1.78413391131527,0,0.447749509444357,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.576570202095319,0.255225424989168,0.2023155617111,0.464845549297286,0,0,0.924100740528266,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0.243713489631284,0,0.818999468447914,0,0,0.551365343546124,0,0.438450885253763,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0.459446800413919,0.507447609232169,0,0,0,0,0,0,0,0,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.45449878232388,0,0,0,0,1.68426486367398,0,0,0.891547074219827,21.5943471572874,0.47748896947538,0.296964680832639,0,0,0,0,1.31843099381408,0,0.796991953004279,1.65770349318689,1.51159648712566,0,0,0,17.0749867179921,17.1860327688585,0,0.789147245095469,0,0,0,0,0,0,0,0,0.568967241427498,51.104983708846,0.709163045303809,0,0,0,3.54296554325536,0.241192877250816,0,0,0,1.09692698576986,0,0,0.230850775511391,0,0,0,0.54323685961004,1.27600463892768,0,2.13213910407454,0,0,0,3.15833924864053,2.54881294613061,6.04157713113034,0,0,0,0,3.39247371441458,0.216388639742091,0,13.1801771109975,9.77648231893801,0,0,0,0.876214728748802,0,0,0,3.7176277597097,2.67058417487502,3.94584402849391,3.62972148145992,0,0.126373159256976,3.00646838828985,0.103688191397247,0,0,0,0,0.569219092059585,0,0,13.4249584457697,6.52944049353019,4.19344003780872,0,0.19351266257817,0.146178634172371,0.164230914106418,0,1.76512253383001,0,0,0,0,121.046305912843,1.60317640503067,13.6609916633186,0.39961921916426,22.7662859103487,0,0,0,7.33089959836052,0.235694034616795,0.135904206073614,0.209205692624666,0.203996435272644,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,2.32991899054908,0,0,0,0.393709926058995,0,0,0,0.643012593860077,0,0.415440338029185,0,0,0,0,3.15222829196793,0.629455057619977,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,2.15292973888239,0.293104467356165,0,1.80996138906171,0.39669780522807,0.684347351537318,53.5659416960671,4.91222097811396,15.0916132895679,2.07119527673598,0,0.592834895693833,0,7.021753835472,0,0,0,0,2.04170325125305,0,0,0,2.86704597845036,1.66393577305278,1.05563885000352,0,2.49960815924213,0.454947352624943,0,38.5835944305002,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,2.31143796488764,0,0,0.226705925512272,0.694567422971502,0.489473409012935,0,0,0,0,0,0.168942440653073,54.5794434592327,0,0,0,0.584580926518165,0,0.490696182767533,0,2.21195617878347,25.5687669263939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0.192687675289379,0,0,0,0,0,0,0,0.490738592505128,1.1796972334774,0.183428598521679,0,0,0,0,2.18109952212846,0,0,0,0,70.9709213841817,0,0,0,0.0634158101939068,0,10.4168975702865,0.496211178389294,0,0,0.535701835878287,0,11.532346480496,17.0746643513473,0.266107110487916,0,1.37190407549935,0,0,0.236387681767936,0.222462803784138,0.549451649953598,0,35.5945647408512,0.913158720509496,9.71674160483796,9.555033757741,0.142953088353313,0,7.20696837282377,0,0,0,0,0,7.31386509994472,0,0,4.23387050190929,0,0,0,5.25720529449624,9.22612195983284,98.1439296107269,0.647428837187895,0,0,0,0.233939463462106,0,0,0.22589216407792,0,19.7761325072342,16.9783147837478,8.74238242015829,3.76253837089218,0.245148321753905,39.5936599130732,0,0,0,0,0,0,0,1.2498775702396,0,79.75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| ||
|short_description=p4@SPATS2L | |||
}} | }} |
Latest revision as of 10:21, 19 September 2015
Short description: | p4@SPATS2L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SPATS2L_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000449647_5end |
EntrezGene: | SPATS2L |
HGNC: | 24574 |
UniProt: | F8VZ02 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 2.64e-11 | 25 |
intestine | 2.26e-10 | 17 |
subdivision of digestive tract | 2.32e-10 | 118 |
digestive system | 1.17e-09 | 145 |
digestive tract | 1.17e-09 | 145 |
primitive gut | 1.17e-09 | 145 |
trunk region element | 2.72e-09 | 101 |
biliary system | 1.39e-08 | 9 |
biliary tree | 1.39e-08 | 9 |
biliary bud | 1.39e-08 | 9 |
endoderm-derived structure | 6.66e-08 | 160 |
endoderm | 6.66e-08 | 160 |
presumptive endoderm | 6.66e-08 | 160 |
small intestine | 1.21e-07 | 4 |
gallbladder | 3.48e-07 | 3 |
gall bladder primordium | 3.48e-07 | 3 |
male genital duct | 7.01e-07 | 3 |
internal male genitalia | 7.01e-07 | 3 |
foregut | 9.10e-07 | 87 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.50e-16 | 106 |
cell type cancer | 4.79e-14 | 143 |
cancer | 3.81e-09 | 235 |
disease of cellular proliferation | 1.06e-08 | 239 |
adenocarcinoma | 2.62e-08 | 25 |