FFCP PHASE1:Hg19::chr20:62327738..62327751,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:62327738..62327751,+ to FFCP PHASE1:Hg19::chr20:62327738..62327751,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8771 | |EntrezGene=8771 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11921 | |HGNC=11921 | ||
|TSSclassifier=strong | |||
|UniProt=O95407 | |UniProt=O95407 | ||
|association_with_transcript=-252bp_to_NM_003823_5end | |||
|cluster_id=chr20:62327738..62327751,+ | |||
|description=CAGE_peak_2_at_TNFRSF6B_5end | |||
|id=chr20:62327738..62327751,+ | |||
|ontology_enrichment_celltype=CL:1000507!5.50e-14!12;CL:1000494!5.50e-14!12;CL:1000449!4.18e-11!16;CL:1000497!6.78e-11!18;CL:0002518!6.78e-11!18;CL:0000222!7.81e-10!119;CL:0002139!2.99e-09!24;CL:0002078!4.15e-08!44;CL:0002681!5.21e-08!13;CL:0002584!5.21e-08!13;CL:0000115!2.36e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:1000507;7.44e-45;10!CL:1000494;7.44e-45;10!CL:1000449;2.06e-29;15!CL:1000497;8.93e-26;17!CL:0002518;8.93e-26;17!CL:0000708;5.14e-18;3!CL:0002681;2.13e-16;12!CL:0002584;2.13e-16;12!CL:0000669;2.42e-13;4!CL:0000650;1.66e-12;2!CL:1000500;1.66e-12;2!CL:1000618;1.66e-12;2!CL:1001318;1.66e-12;2!CL:0002173;1.66e-12;2!CL:0002138;5.46e-09;6!CL:0000239;1.57e-08;3!CL:1000615;1.57e-08;3!CL:0002306;1.57e-08;3!CL:0000342;3.17e-07;1!CL:0002565;3.17e-07;1!CL:0002379;8.23e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,5.16e-45,10;CL:1000494,5.16e-45,10;CL:1000449,1.62e-29,15;CL:1000497,7.23e-26,17;CL:0002518,7.23e-26,17;CL:0000708,2.59e-18,3;CL:0002681,1.90e-16,12;CL:0002584,1.90e-16,12;CL:0000669,4.65e-13,4;CL:0000650,2.22e-12,2;CL:1000500,2.22e-12,2;CL:1000618,2.22e-12,2;CL:1001318,2.22e-12,2;CL:0002173,2.22e-12,2;CL:0005020,3.93e-09,6;CL:0002138,3.93e-09,6;CL:0005022,3.93e-09,6;CL:0000239,1.23e-08,3;CL:1000615,1.23e-08,3;CL:0002306,1.23e-08,3;CL:0000342,3.17e-07,1;CL:0002565,3.17e-07,1;CL:0002379,8.98e-07,1 | |||
|ontology_enrichment_development_v019=CL:0005022;5.46e-09;6!UBERON:0005425;8.23e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3620;8.23e-07;1!DOID:3565;8.23e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,8.98e-07,1;DOID:3565,8.98e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0009773!5.50e-14!12;UBERON:0001231!5.50e-14!12;UBERON:0004810!5.50e-14!12;UBERON:0000119!3.98e-12!312;UBERON:0003887!1.05e-11!21;UBERON:0006555!1.71e-11!17;UBERON:0005103!1.71e-11!17;UBERON:0000083!1.71e-11!17;UBERON:0009201!1.71e-11!17;UBERON:0004819!1.71e-11!17;UBERON:0006553!1.71e-11!17;UBERON:0003074!1.71e-11!17;UBERON:0003060!1.71e-11!17;UBERON:0004211!4.18e-11!16;UBERON:0001285!4.18e-11!16;UBERON:0007684!4.18e-11!16;UBERON:0003220!4.18e-11!16;UBERON:0004208!4.18e-11!16;UBERON:0000483!8.52e-11!309;UBERON:0000025!1.05e-10!194;UBERON:0000080!1.43e-10!18;UBERON:0002120!1.43e-10!18;UBERON:0004875!1.43e-10!18;UBERON:0005721!1.43e-10!18;UBERON:0005754!1.43e-10!18;UBERON:0007297!1.43e-10!18;UBERON:0000477!7.39e-10!286;UBERON:0000489!2.05e-09!32;UBERON:0000058!2.77e-09!26;UBERON:0004111!3.00e-09!241;UBERON:0004876!5.09e-09!20;UBERON:0002113!7.41e-09!27;UBERON:0003918!7.41e-09!27;UBERON:0005095!7.41e-09!27;UBERON:0007687!7.41e-09!27;UBERON:0004732!1.77e-08!13;UBERON:0002049!2.84e-08!79;UBERON:0007798!2.84e-08!79;UBERON:0001225!5.21e-08!13;UBERON:0008987!5.21e-08!13;UBERON:0003076!1.05e-07!15;UBERON:0003057!1.05e-07!15;UBERON:0004733!1.65e-07!12;UBERON:0002028!1.65e-07!12;UBERON:0007277!1.65e-07!12;UBERON:0000481!4.74e-07!347;UBERON:0000353!9.49e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;7.44e-45;10!UBERON:0009773;7.44e-45;10!UBERON:0001231;7.44e-45;10!UBERON:0004810;7.44e-45;10!UBERON:0006555;2.06e-29;15!UBERON:0004819;2.06e-29;15!UBERON:0001285;2.06e-29;15!UBERON:0007684;2.06e-29;15!UBERON:0003210;5.14e-18;3!UBERON:0002113;8.17e-18;24!UBERON:0011143;8.17e-18;24!UBERON:0000353;1.78e-17;15!UBERON:0001225;2.13e-16;12!UBERON:0008987;2.13e-16;12!UBERON:0000489;1.77e-14;29!UBERON:0006554;6.04e-14;30!UBERON:0001008;6.04e-14;30!UBERON:0001851;5.22e-13;15!UBERON:0003567;1.66e-12;2!UBERON:0003838;1.66e-12;2!UBERON:0003586;1.66e-12;2!UBERON:0005169;1.66e-12;2!UBERON:0002321;1.66e-12;2!UBERON:0005215;1.66e-12;2!UBERON:0002303;1.66e-12;2!UBERON:0002319;1.66e-12;2!UBERON:0002405;3.83e-12;27!UBERON:0001473;2.26e-11;8!UBERON:0004536;2.26e-11;8!UBERON:0006558;2.26e-11;8!UBERON:0005172;3.39e-09;52!UBERON:0005173;3.39e-09;52!UBERON:0002465;4.04e-09;10!UBERON:0002106;8.38e-09;3!UBERON:0006853;1.57e-08;3!UBERON:0007685;1.57e-08;3!UBERON:0004134;1.57e-08;3!UBERON:0002506;3.17e-07;1!UBERON:0001769;3.17e-07;1!UBERON:0004732;6.43e-07;13!UBERON:0000941;8.23e-07;1!UBERON:0001785;8.23e-07;1!UBERON:0002464;8.23e-07;1!UBERON:0004904;8.23e-07;1!UBERON:0001021;8.23e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,5.16e-45,10;UBERON:0004211,1.62e-29,15;UBERON:0009773,1.62e-29,15;UBERON:0001231,1.62e-29,15;UBERON:0001285,1.62e-29,15;UBERON:0007684,1.62e-29,15;UBERON:0004208,1.62e-29,15;UBERON:0006555,1.41e-27,16;UBERON:0004819,1.41e-27,16;UBERON:0003210,2.59e-18,3;UBERON:0000353,1.46e-17,15;UBERON:0001225,1.90e-16,12;UBERON:0008987,1.90e-16,12;UBERON:0002113,2.20e-16,26;UBERON:0003918,2.20e-16,26;UBERON:0011143,2.20e-16,26;UBERON:0005095,2.20e-16,26;UBERON:0007687,2.20e-16,26;UBERON:0000489,1.71e-13,31;UBERON:0001851,4.76e-13,15;UBERON:0005172,6.74e-13,54;UBERON:0005173,6.74e-13,54;UBERON:0003567,2.22e-12,2;UBERON:0003838,2.22e-12,2;UBERON:0003586,2.22e-12,2;UBERON:0005169,2.22e-12,2;UBERON:0002321,2.22e-12,2;UBERON:0005215,2.22e-12,2;UBERON:0002303,2.22e-12,2;UBERON:0002319,2.22e-12,2;UBERON:0001473,1.37e-11,8;UBERON:0004536,1.37e-11,8;UBERON:0006558,1.37e-11,8;UBERON:0002417,2.27e-11,60;UBERON:0000916,2.27e-11,60;UBERON:0005177,5.09e-11,101;UBERON:0009569,1.46e-09,112;UBERON:0002465,2.72e-09,10;UBERON:0002106,8.73e-09,3;UBERON:0004854,8.73e-09,3;UBERON:0009034,8.73e-09,3;UBERON:0002095,8.73e-09,3;UBERON:0004782,8.73e-09,3;UBERON:0003281,8.73e-09,3;UBERON:0009664,8.73e-09,3;UBERON:0002296,8.73e-09,3;UBERON:0005602,8.73e-09,3;UBERON:0001179,8.73e-09,3;UBERON:0006293,8.73e-09,3;UBERON:0006853,1.23e-08,3;UBERON:0007685,1.23e-08,3;UBERON:0004134,1.23e-08,3;UBERON:0006554,2.21e-08,47;UBERON:0001008,3.54e-08,48;UBERON:0003887,7.27e-08,12;UBERON:0002506,3.17e-07,1;UBERON:0001769,3.17e-07,1;UBERON:0000941,6.02e-07,1;UBERON:0001785,6.02e-07,1;UBERON:0002464,6.02e-07,1;UBERON:0004904,6.02e-07,1;UBERON:0001021,6.02e-07,1;UBERON:0003902,6.02e-07,1;UBERON:0005425,6.02e-07,1;UBERON:0004732,7.21e-07,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0.61560529038394,1.22400414746552,0.626909442956176,0,0.136874425072884,0.376627918784408,0,0.0821005894499457,0,0,0.383829398097213,0,1.83884244895785,0,0.369754010166788,0,0,0,0.553995408531877,0,0,0,0,0,0.145398238779565,0,0,0,0,0.619412741790207,0.28769239232215,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,1.0429658368404,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.756278537312543,1.10864698731282,0.702678285545008,0.130979075497713,0,0,0.324547393654683,0.696518949197069,0.398873881556595,0,0,0,0.198762407366705,0.860234595106124,0.694281003215189,0,0.419499436209906,0,0.417989933073621,0.258416759169329,0.35576626268671,0,0.402829317109147,0.760272105718513,0.488124115096339,0,0.81014194788176,0.267899184852239,0.22452937262617,0.112611480483322,0,0,0.183201743930407,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0.269421344139376,0,0,0,0.70296429550139,0,0,0.448346041655403,0.23486899728753,0,0.140450806702248,0.204154171254893,0.368502951935304,0,0,0,0,1.43723628363248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,2.57351715447788,0,0,0,0,0,0,0,0.463721619900307,0.234817388471643,1.29929802984966,2.77791307545966,1.52203321787679,0,0,0.492434012174795,0.234004265139238,0.148631162288728,0,0.16798212819886,0,0.268675568108545,0,0,0,0.264145302039678,0,0.432359860250884,0.12624243342638,0,0,0,0,0,0,0,3.25180144601546,1.74384027533312,2.6401782895542,0,0,0,0,0,0,1.41849132023278,1.0656887160644,0.285955987316295,0,0.823240336780769,0.65147236858747,0,0.791951872933429,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00034104211935,0,0,0,0,0.234282829985426,0,0,0,0,0,0.0868836144680828,0.783204629850962,1.02943027143257,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.532685175939381,0.164254312027618,0,0.116210378459959,0,0,0,0,0,0,1.35359883872224,1.23224539367064,5.49044838423799,2.92278449306521,2.42768746453614,0,0.850468526382578,0.647747748306418,0,1.08378575017541,3.01013864312912,1.52925763827023,0.831076008928724,2.23874754722178,0,0,0.256450125116389,0,0,0.824328093181778,0,0,0,0,0,0.290012154876366,0.154048617114644,0.307007349452259,0.827019434907183,0.322260734604821,0,0.426133137080504,0,0.165284915360978,0,0.127612712494584,0,0,0,0,0.308033580176089,0.532306030317022,0,0.18532421910392,0,0.372158369359667,0.316379424718726,0,0,0.42793898803392,0.318203247925937,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0.243713489631284,1.05650146756755,0,0,0,0.551365343546124,0,0,0,0.655894752046633,0,0.30982349809975,0.281695602532241,0.573645408816206,0.0982490410131212,0,0.354761064070598,0,0.658589785919804,0,0.349934720244983,0.577332676353072,0,0,0.376575203107117,0,0,0.886860307073351,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0.159426272728822,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0.852408440419239,0,0,0,0.994147647766298,0.281338832821026,0,0.329607748453519,0,0,0,0,0,0,0,0.359473404589307,0,0.511572370226872,0.591860433821602,0,0,0,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0,1.45668227720456,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0.225980740780532,0.137041924646751,0,0.0633107959558787,0,0.0801588202515337,0,0,0,0,0,0.576219191952599,0.49701014226173,0.235694034616795,0,0,0,0,0,0.273810757783986,0,0,0.525774708558629,0,0,0.717873024576814,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.104909176269996,0,0,0.191915197319445,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,1.0342636508924,0.79339561045614,0,0,2.24253566392159,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0.3755727921195,1.14681839138014,0.332787154610557,0.496771223531068,0,0,0,0,1.17632909849086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0.521745061811734,0.300515217994437,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0.489473409012935,0,0,0,0.706756583783524,0.192914038270915,0.675769762612291,0,0,0,0.276516872303462,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638535436228605,0,0,0,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0.739280431085226,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0.271878931907327,0,0,0,0,0.157115589916002,0,0,0,0.47775168788705,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,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| ||
|short_description=p2@TNFRSF6B | |||
}} | }} |
Latest revision as of 13:52, 17 September 2015
Short description: | p2@TNFRSF6B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TNFRSF6B_5end |
Coexpression cluster: | NA |
Association with transcript: | -252bp_to_NM_003823_5end |
EntrezGene: | TNFRSF6B |
HGNC: | 11921 |
UniProt: | O95407 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 5.16e-45 | 10 |
nephron tubule epithelial cell | 5.16e-45 | 10 |
epithelial cell of nephron | 1.62e-29 | 15 |
kidney cell | 7.23e-26 | 17 |
kidney epithelial cell | 7.23e-26 | 17 |
leptomeningeal cell | 2.59e-18 | 3 |
kidney cortical cell | 1.90e-16 | 12 |
renal cortical epithelial cell | 1.90e-16 | 12 |
pericyte cell | 4.65e-13 | 4 |
mesangial cell | 2.22e-12 | 2 |
kidney interstitial cell | 2.22e-12 | 2 |
juxtaglomerular complex cell | 2.22e-12 | 2 |
renal interstitial pericyte | 2.22e-12 | 2 |
extraglomerular mesangial cell | 2.22e-12 | 2 |
lymphangioblast | 3.93e-09 | 6 |
endothelial cell of lymphatic vessel | 3.93e-09 | 6 |
vascular lymphangioblast | 3.93e-09 | 6 |
brush border epithelial cell | 1.23e-08 | 3 |
kidney cortex tubule cell | 1.23e-08 | 3 |
epithelial cell of proximal tubule | 1.23e-08 | 3 |
pigment cell (sensu Vertebrata) | 3.17e-07 | 1 |
iris pigment epithelial cell | 3.17e-07 | 1 |
meningothelial cell | 8.98e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 8.98e-07 | 1 |
meningioma | 8.98e-07 | 1 |