FFCP PHASE1:Hg19::chr1:87012850..87012864,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:87012850..87012864,+ to FFCP PHASE1:Hg19::chr1:87012850..87012864,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22802 | |EntrezGene=22802 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2018 | |HGNC=2018 | ||
|TSSclassifier=strong | |||
|UniProt=A8MQC9 | |UniProt=A8MQC9 | ||
|association_with_transcript=-61bp_to_ENST00000263723_5end | |||
|cluster_id=chr1:87012850..87012864,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_3_at_CLCA4_5end | |||
|id=chr1:87012850..87012864,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.46e-17;82!UBERON:0010122;2.28e-12;2!UBERON:0006241;1.40e-08;3!UBERON:0003057;1.40e-08;3!UBERON:0002532;1.35e-07;206!UBERON:0010316;1.35e-07;206!UBERON:0009143;3.26e-07;1!UBERON:0006222;3.26e-07;1!UBERON:0005425;5.21e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.18e-90!57;UBERON:0005068!1.18e-90!57;UBERON:0006241!1.18e-90!57;UBERON:0007135!1.18e-90!57;UBERON:0002780!1.63e-73!41;UBERON:0001890!1.63e-73!41;UBERON:0006240!1.63e-73!41;UBERON:0002616!1.70e-73!59;UBERON:0003080!1.26e-71!42;UBERON:0002020!1.82e-71!34;UBERON:0003528!1.82e-71!34;UBERON:0001893!4.07e-71!34;UBERON:0002791!6.84e-68!33;UBERON:0001017!1.62e-66!82;UBERON:0007023!1.45e-65!115;UBERON:0000955!1.59e-64!69;UBERON:0006238!1.59e-64!69;UBERON:0001869!3.49e-64!32;UBERON:0005743!4.69e-63!86;UBERON:0003075!1.91e-60!86;UBERON:0007284!1.91e-60!86;UBERON:0000073!1.59e-59!94;UBERON:0001016!1.59e-59!94;UBERON:0002346!2.27e-57!90;UBERON:0002619!1.27e-47!22;UBERON:0003056!2.59e-47!61;UBERON:0000956!1.34e-41!25;UBERON:0000203!1.34e-41!25;UBERON:0001950!4.94e-41!20;UBERON:0000153!4.89e-39!129;UBERON:0007811!4.89e-39!129;UBERON:0000033!6.22e-37!123;UBERON:0002308!1.90e-33!9;UBERON:0000125!1.90e-33!9;UBERON:0002420!4.04e-33!9;UBERON:0007245!4.04e-33!9;UBERON:0010009!4.04e-33!9;UBERON:0010011!4.04e-33!9;UBERON:0000454!4.04e-33!9;UBERON:0004121!5.73e-31!169;UBERON:0000924!4.87e-30!173;UBERON:0006601!4.87e-30!173;UBERON:0009663!4.38e-26!7;UBERON:0002298!3.87e-23!8;UBERON:0000200!6.77e-22!6;UBERON:0000025!1.01e-21!194;UBERON:0003076!2.79e-19!15;UBERON:0003057!2.79e-19!15;UBERON:0000349!5.34e-19!5;UBERON:0004111!7.78e-18!241;UBERON:0001871!1.20e-16!7;UBERON:0000477!1.89e-15!286;UBERON:0000064!1.95e-15!219;UBERON:0000369!2.01e-15!4;UBERON:0002435!2.01e-15!4;UBERON:0000204!2.01e-15!4;UBERON:0010082!2.01e-15!4;UBERON:0000475!3.50e-14!365;UBERON:0004732!7.55e-14!13;UBERON:0000988!7.52e-13!3;UBERON:0006331!1.11e-12!3;UBERON:0000483!1.24e-12!309;UBERON:0000119!2.03e-12!312;UBERON:0002771!2.57e-12!3;UBERON:0005383!4.21e-12!3;UBERON:0005382!4.21e-12!3;UBERON:0002240!5.08e-12!3;UBERON:0001896!6.35e-12!3;UBERON:0005290!6.35e-12!3;UBERON:0010096!6.35e-12!3;UBERON:0001872!9.51e-12!5;UBERON:0004733!3.69e-11!12;UBERON:0002028!3.69e-11!12;UBERON:0007277!3.69e-11!12;UBERON:0001897!2.61e-09!2;UBERON:0002148!4.36e-09!2;UBERON:0009662!4.36e-09!2;UBERON:0005162!5.72e-09!2;UBERON:0000122!5.72e-09!2;UBERON:0001873!5.95e-09!2;UBERON:0010122!5.95e-09!2;UBERON:0000062!5.98e-09!511;UBERON:0001875!8.10e-09!2;UBERON:0006514!8.10e-09!2;UBERON:0001876!9.44e-09!2;UBERON:0001954!1.23e-08!2;UBERON:0003022!1.23e-08!2;UBERON:0002421!1.23e-08!2;UBERON:0002600!1.23e-08!2;UBERON:0001870!2.61e-08!2;UBERON:0003127!4.21e-08!2;UBERON:0005174!2.25e-07!5;UBERON:0001137!2.25e-07!5;UBERON:0000481!3.26e-07!347;UBERON:0002021!4.30e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.37e-48;34!UBERON:0002780;3.36e-48;41!UBERON:0001890;3.36e-48;41!UBERON:0003528;2.02e-47;34!UBERON:0002020;2.02e-47;34!UBERON:0000073;5.79e-46;53!UBERON:0002616;5.79e-46;53!UBERON:0002791;1.57e-45;32!UBERON:0001869;2.68e-44;32!UBERON:0000125;4.22e-39;9!UBERON:0002308;4.22e-39;9!UBERON:0002420;1.70e-38;9!UBERON:0007245;1.70e-38;9!UBERON:0010009;1.70e-38;9!UBERON:0010011;1.70e-38;9!UBERON:0000454;1.70e-38;9!UBERON:0002298;1.62e-33;6!UBERON:0002619;4.64e-32;22!UBERON:0009663;2.43e-28;7!UBERON:0000956;4.32e-28;25!UBERON:0000203;4.32e-28;25!UBERON:0000349;2.36e-27;5!UBERON:0001017;1.54e-24;75!UBERON:0001950;2.02e-24;20!UBERON:0000955;2.17e-23;68!UBERON:0001016;1.29e-21;83!UBERON:0004732;1.61e-20;13!UBERON:0000988;2.99e-18;3!UBERON:0007023;7.36e-18;114!UBERON:0001896;4.53e-17;3!UBERON:0005290;4.53e-17;3!UBERON:0004733;1.65e-16;12!UBERON:0002028;1.65e-16;12!UBERON:0000200;4.20e-15;6!UBERON:0000369;3.62e-13;4!UBERON:0002435;3.62e-13;4!UBERON:0000204;3.62e-13;4!UBERON:0001897;4.65e-13;2!UBERON:0010225;4.65e-13;2!UBERON:0001871;5.72e-13;6!UBERON:0002148;9.37e-13;2!UBERON:0006331;9.37e-13;2!UBERON:0009662;9.37e-13;2!UBERON:0005162;1.49e-12;2!UBERON:0000122;1.49e-12;2!UBERON:0001873;2.28e-12;2!UBERON:0002771;2.95e-12;2!UBERON:0001875;2.95e-12;2!UBERON:0006514;2.95e-12;2!UBERON:0001876;4.63e-12;2!UBERON:0001954;4.63e-12;2!UBERON:0003022;4.63e-12;2!UBERON:0002421;4.63e-12;2!UBERON:0002600;4.63e-12;2!UBERON:0011216;6.24e-10;132!UBERON:0002240;1.40e-08;3!UBERON:0005174;1.40e-08;3!UBERON:0001137;1.40e-08;3!UBERON:0005383;1.57e-08;3!UBERON:0005382;1.57e-08;3!UBERON:0001870;2.51e-08;3!UBERON:0001894;3.24e-08;7!UBERON:0010314;4.25e-08;132!UBERON:0002336;3.26e-07;1!UBERON:0011215;3.26e-07;1!UBERON:0001018;3.26e-07;1!UBERON:0002473;3.26e-07;1!UBERON:0005340;3.26e-07;1!UBERON:0003544;3.26e-07;1!UBERON:0005970;3.26e-07;1!UBERON:0002316;3.26e-07;1!UBERON:0001020;3.26e-07;1!UBERON:0002437;3.26e-07;1!UBERON:0002038;5.21e-07;1!UBERON:0000941;5.21e-07;1!UBERON:0001785;5.21e-07;1!UBERON:0002464;5.21e-07;1!UBERON:0004904;5.21e-07;1!UBERON:0001021;5.21e-07;1!UBERON:0009661;5.21e-07;1!UBERON:0002950;5.21e-07;1!UBERON:0001891;5.21e-07;1!UBERON:0002784;6.20e-07;4 | |||
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|short_description=p3@CLCA4 | |||
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Latest revision as of 14:32, 19 September 2015
Short description: | p3@CLCA4 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CLCA4_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -61bp_to_ENST00000263723_5end |
EntrezGene: | CLCA4 |
HGNC: | 2018 |
UniProt: | A8MQC9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data