FFCP PHASE1:Hg19::chr1:16076122..16076138,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:16076122..16076138,- to FFCP PHASE1:Hg19::chr1:16076122..16076138,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=252bp_to_ENST00000418525_5end | |||
|cluster_id=chr1:16076122..16076138,- | |||
|description=CAGE_peak_1_at_ENST00000418525_5end | |||
|id=chr1:16076122..16076138,- | |||
|ontology_enrichment_celltype=CL:0000213!1.23e-30!57;CL:0000215!1.23e-30!57;CL:0002139!1.98e-30!24;CL:0000071!3.49e-28!18;CL:0002546!3.49e-28!18;CL:0000115!1.08e-27!35;CL:0000222!2.12e-27!119;CL:0002078!8.34e-24!44;CL:0000076!4.09e-17!62;CL:1000413!7.23e-17!9;CL:0000220!5.73e-14!246;CL:0002321!1.04e-13!248;CL:0002543!6.67e-12!6;CL:0002544!7.83e-12!6;CL:0000066!7.79e-10!254;CL:0002594!1.45e-07!4;CL:0000077!1.75e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0000071;7.79e-88;18!CL:0002139;3.60e-82;24!CL:0000115;9.47e-72;36!CL:1000413;2.41e-56;9!CL:0002543;1.75e-38;6!CL:0002544;3.31e-38;6!CL:0002078;7.61e-37;45!CL:0000213;4.53e-30;58!CL:0000215;4.53e-30;58!CL:0002618;1.37e-19;3!CL:0000076;9.68e-16;63!CL:0002545;4.84e-14;2!CL:0002188;9.14e-12;5!CL:1000746;1.52e-08;7!CL:1000612;1.52e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,8.30e-88,18;CL:0002546,8.30e-88,18;CL:0002139,5.58e-82,24;CL:0000115,1.21e-80,36;CL:0002078,1.18e-63,45;CL:1000413,2.07e-56,9;CL:0000213,2.05e-48,58;CL:0000215,2.05e-48,58;CL:0002543,1.64e-38,6;CL:0002544,2.92e-38,6;CL:0000222,2.33e-30,121;CL:0000076,9.36e-23,63;CL:0002618,1.29e-19,3;CL:0002321,1.89e-14,250;CL:0002545,4.54e-14,2;CL:0002188,9.14e-12,5;CL:0000066,1.08e-10,253;CL:1000746,1.52e-08,7;CL:1000612,1.52e-08,7 | |||
|ontology_enrichment_development_v019=CL:0002546;7.79e-88;18!CL:0000222;1.06e-10;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060085;8.01e-08;1!DOID:3165;8.01e-08;1!DOID:0060121;8.01e-08;1!DOID:2438;8.01e-08;1!DOID:4418;8.01e-08;1!DOID:3112;2.24e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,7.76e-08,1;DOID:3165,7.76e-08,1;DOID:0060121,7.76e-08,1;DOID:2438,7.76e-08,1;DOID:4418,7.76e-08,1;DOID:3112,2.47e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000055!3.41e-33!69;UBERON:0001981!7.70e-32!60;UBERON:0007500!7.70e-32!60;UBERON:0004537!7.70e-32!60;UBERON:0006965!7.70e-32!60;UBERON:0002049!4.33e-30!79;UBERON:0007798!4.33e-30!79;UBERON:0001986!3.49e-28!18;UBERON:0004638!3.49e-28!18;UBERON:0004852!3.49e-28!18;UBERON:0004872!8.28e-26!84;UBERON:0004535!3.36e-22!110;UBERON:0000487!5.55e-22!22;UBERON:0001009!3.22e-21!113;UBERON:0001637!2.99e-20!42;UBERON:0003509!2.99e-20!42;UBERON:0004572!2.99e-20!42;UBERON:0003914!7.02e-20!118;UBERON:0006914!1.19e-18!25;UBERON:0003915!7.23e-17!9;UBERON:0004700!7.23e-17!9;UBERON:0001917!7.23e-17!9;UBERON:0000490!2.81e-13!138;UBERON:0000477!1.14e-12!286;UBERON:0004573!1.75e-11!33;UBERON:0004571!1.75e-11!33;UBERON:0000025!1.25e-10!194;UBERON:0004111!1.63e-10!241;UBERON:0000119!3.18e-08!312;UBERON:0000483!4.70e-08!309;UBERON:0001737!5.59e-08!9;UBERON:0001310!1.45e-07!4;UBERON:0001638!1.55e-07!9;UBERON:0003920!1.55e-07!9;UBERON:0004582!1.55e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;7.79e-88;18!UBERON:0001986;7.79e-88;18!UBERON:0004852;7.79e-88;18!UBERON:0000487;2.76e-71;22!UBERON:0006914;2.40e-62;25!UBERON:0003915;2.41e-56;9!UBERON:0004700;2.41e-56;9!UBERON:0001917;2.41e-56;9!UBERON:0000490;9.95e-43;33!UBERON:0007500;7.40e-29;56!UBERON:0001981;7.40e-29;56!UBERON:0004537;7.40e-29;56!UBERON:0001638;1.65e-25;9!UBERON:0003920;1.65e-25;9!UBERON:0004582;1.65e-25;9!UBERON:0000055;1.88e-24;65!UBERON:0001637;3.15e-24;42!UBERON:0003509;3.15e-24;42!UBERON:0004572;3.15e-24;42!UBERON:0003914;2.55e-21;74!UBERON:0002049;2.56e-19;75!UBERON:0007798;2.56e-19;75!UBERON:0004573;6.58e-17;33!UBERON:0004571;6.58e-17;33!UBERON:0000025;3.41e-16;93!UBERON:0000947;3.58e-14;21!UBERON:0010191;3.58e-14;21!UBERON:0005800;4.84e-14;2!UBERON:0001515;4.84e-14;2!UBERON:0002066;5.62e-12;5!UBERON:0001009;1.25e-11;112!UBERON:0010260;2.51e-11;9!UBERON:0000119;2.82e-11;139!UBERON:0004535;3.77e-10;109!UBERON:0000483;1.34e-09;136!UBERON:0004111;2.79e-09;130!UBERON:0000074;1.52e-08;7!UBERON:0001229;1.52e-08;7!UBERON:0000353;8.05e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,8.30e-88,18;UBERON:0001986,8.30e-88,18;UBERON:0004852,8.30e-88,18;UBERON:0000487,2.91e-71,22;UBERON:0006914,2.51e-62,25;UBERON:0003915,2.07e-56,9;UBERON:0004700,2.07e-56,9;UBERON:0001917,2.07e-56,9;UBERON:0000055,6.86e-49,68;UBERON:0007500,8.71e-48,59;UBERON:0001981,8.71e-48,59;UBERON:0004537,8.71e-48,59;UBERON:0006965,8.71e-48,59;UBERON:0002049,5.01e-42,78;UBERON:0007798,5.01e-42,78;UBERON:0004872,1.07e-32,83;UBERON:0003914,4.49e-29,117;UBERON:0004535,9.71e-29,109;UBERON:0001009,7.64e-28,112;UBERON:0001637,8.40e-27,42;UBERON:0003509,8.40e-27,42;UBERON:0004572,8.40e-27,42;UBERON:0001638,1.59e-25,9;UBERON:0003920,1.59e-25,9;UBERON:0004582,1.59e-25,9;UBERON:0004573,1.45e-17,33;UBERON:0004571,1.45e-17,33;UBERON:0000490,2.44e-16,148;UBERON:0003081,4.40e-16,203;UBERON:0000025,1.07e-15,192;UBERON:0000947,3.58e-14,21;UBERON:0010191,3.58e-14,21;UBERON:0005800,4.54e-14,2;UBERON:0001515,4.54e-14,2;UBERON:0004111,4.96e-14,240;UBERON:0002066,5.42e-12,5;UBERON:0010260,2.42e-11,9;UBERON:0000483,6.20e-09,306;UBERON:0000119,8.48e-09,309;UBERON:0000926,1.43e-08,315;UBERON:0004120,1.43e-08,315;UBERON:0006603,1.43e-08,315;UBERON:0010532,1.52e-08,7;UBERON:0000074,1.52e-08,7;UBERON:0001229,1.52e-08,7;UBERON:0001230,1.52e-08,7;UBERON:0003220,1.52e-08,7;UBERON:0005749,1.52e-08,7;UBERON:0004199,1.52e-08,7;UBERON:0004209,1.52e-08,7;UBERON:0004198,1.52e-08,7;UBERON:0005103,1.57e-07,8;UBERON:0000083,1.57e-07,8;UBERON:0009201,1.57e-07,8;UBERON:0006553,1.57e-07,8;UBERON:0003074,1.57e-07,8;UBERON:0003060,1.57e-07,8;UBERON:0000353,7.56e-07,15;UBERON:0000080,9.65e-07,9;UBERON:0002120,9.65e-07,9;UBERON:0004875,9.65e-07,9;UBERON:0005721,9.65e-07,9;UBERON:0005754,9.65e-07,9;UBERON:0007297,9.65e-07,9 | |||
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| ||
|short_description=p1@ENST00000418525 | |||
}} | }} |
Latest revision as of 23:26, 27 July 2015
Short description: | p1@ENST00000418525 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000418525_5end |
Coexpression cluster: | NA |
Association with transcript: | 252bp_to_ENST00000418525_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 8.30e-88 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.30e-88 | 18 |
endothelial cell of vascular tree | 5.58e-82 | 24 |
endothelial cell | 1.21e-80 | 36 |
meso-epithelial cell | 1.18e-63 | 45 |
endothelial cell of artery | 2.07e-56 | 9 |
lining cell | 2.05e-48 | 58 |
barrier cell | 2.05e-48 | 58 |
vein endothelial cell | 1.64e-38 | 6 |
aortic endothelial cell | 2.92e-38 | 6 |
mesodermal cell | 2.33e-30 | 121 |
squamous epithelial cell | 9.36e-23 | 63 |
endothelial cell of umbilical vein | 1.29e-19 | 3 |
embryonic cell | 1.89e-14 | 250 |
thoracic aorta endothelial cell | 4.54e-14 | 2 |
glomerular endothelial cell | 9.14e-12 | 5 |
epithelial cell | 1.08e-10 | 253 |
glomerular cell | 1.52e-08 | 7 |
kidney corpuscule cell | 1.52e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 7.76e-08 | 1 |
skin benign neoplasm | 7.76e-08 | 1 |
integumentary system benign neoplasm | 7.76e-08 | 1 |
dermis tumor | 7.76e-08 | 1 |
cutaneous fibrous histiocytoma | 7.76e-08 | 1 |
papillary adenocarcinoma | 2.47e-07 | 1 |