FFCP PHASE1:Hg19::chr1:149908263..149908281,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:149908263..149908281,- to FFCP PHASE1:Hg19::chr1:149908263..149908281,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10903 | |EntrezGene=10903 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24307 | |HGNC=24307 | ||
|TSSclassifier=strong | |||
|UniProt=A4FU01 | |UniProt=A4FU01 | ||
|association_with_transcript=0bp_to_NM_181873,uc001etm.1,uc010pbm.1_5end | |||
|cluster_id=chr1:149908263..149908281,- | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_6_at_MTMR11_5end | |||
|id=chr1:149908263..149908281,- | |||
|ontology_enrichment_celltype=CL:1000507!1.79e-12!12;CL:1000494!1.79e-12!12;CL:1000497!5.99e-10!18;CL:0002518!5.99e-10!18;CL:1000449!6.00e-09!16;CL:0002681!1.09e-08!13;CL:0002584!1.09e-08!13;CL:0000239!2.06e-08!3;CL:1000615!2.06e-08!3;CL:0002306!2.06e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000650;2.37e-25;2!CL:1000500;2.37e-25;2!CL:1000618;2.37e-25;2!CL:1001318;2.37e-25;2!CL:0002173;2.37e-25;2!CL:0000669;3.42e-13;4!CL:1000497;7.46e-12;17!CL:0002518;7.46e-12;17!CL:1000507;1.31e-11;10!CL:1000494;1.31e-11;10!CL:1000746;6.29e-08;7!CL:1000612;6.29e-08;7!CL:1000449;6.37e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000650,4.43e-25,2;CL:1000500,4.43e-25,2;CL:1000618,4.43e-25,2;CL:1001318,4.43e-25,2;CL:0002173,4.43e-25,2;CL:0000669,4.66e-13,4;CL:1000497,8.85e-12,17;CL:0002518,8.85e-12,17;CL:1000507,1.63e-11,10;CL:1000494,1.63e-11,10;CL:1000449,7.36e-08,15;CL:1000746,7.50e-08,7;CL:1000612,7.50e-08,7 | |||
|ontology_enrichment_development_v019=UBERON:0006242;1.42e-13;1!UBERON:0003918;8.42e-12;10!UBERON:0007687;8.42e-12;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4929;1.99e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,1.64e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0009773!1.79e-12!12;UBERON:0001231!1.79e-12!12;UBERON:0004810!1.79e-12!12;UBERON:0002113!4.25e-11!27;UBERON:0003918!4.25e-11!27;UBERON:0005095!4.25e-11!27;UBERON:0007687!4.25e-11!27;UBERON:0006555!1.44e-10!17;UBERON:0005103!1.44e-10!17;UBERON:0000083!1.44e-10!17;UBERON:0009201!1.44e-10!17;UBERON:0004819!1.44e-10!17;UBERON:0006553!1.44e-10!17;UBERON:0003074!1.44e-10!17;UBERON:0003060!1.44e-10!17;UBERON:0005172!6.08e-10!55;UBERON:0005173!6.08e-10!55;UBERON:0000080!7.15e-10!18;UBERON:0002120!7.15e-10!18;UBERON:0004875!7.15e-10!18;UBERON:0005721!7.15e-10!18;UBERON:0005754!7.15e-10!18;UBERON:0007297!7.15e-10!18;UBERON:0002417!1.40e-09!61;UBERON:0000916!1.40e-09!61;UBERON:0004211!6.00e-09!16;UBERON:0001285!6.00e-09!16;UBERON:0007684!6.00e-09!16;UBERON:0003220!6.00e-09!16;UBERON:0004208!6.00e-09!16;UBERON:0000489!6.71e-09!32;UBERON:0000160!7.01e-09!27;UBERON:0001225!1.09e-08!13;UBERON:0008987!1.09e-08!13;UBERON:0004876!1.09e-08!20;UBERON:0006853!2.06e-08!3;UBERON:0007685!2.06e-08!3;UBERON:0004134!2.06e-08!3;UBERON:0003887!3.48e-08!21;UBERON:0000058!9.08e-08!26;UBERON:0003886!1.12e-07!63;UBERON:0005409!1.21e-07!35;UBERON:0000466!3.61e-07!126;UBERON:0000062!5.61e-07!511;UBERON:0001851!7.83e-07!16;UBERON:0005177!9.46e-07!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0003567;2.37e-25;2!UBERON:0003838;2.37e-25;2!UBERON:0003586;2.37e-25;2!UBERON:0005169;2.37e-25;2!UBERON:0002321;2.37e-25;2!UBERON:0005215;2.37e-25;2!UBERON:0002303;2.37e-25;2!UBERON:0002319;2.37e-25;2!UBERON:0000160;5.72e-25;17!UBERON:0002108;2.38e-23;4!UBERON:0005409;1.72e-19;22!UBERON:0002113;3.73e-18;24!UBERON:0011143;3.73e-18;24!UBERON:0000489;5.57e-15;29!UBERON:0006554;1.80e-14;30!UBERON:0001008;1.80e-14;30!UBERON:0001155;2.63e-13;9!UBERON:0003891;3.42e-13;4!UBERON:0004921;7.82e-12;33!UBERON:0004211;1.31e-11;10!UBERON:0009773;1.31e-11;10!UBERON:0001231;1.31e-11;10!UBERON:0004810;1.31e-11;10!UBERON:0000059;5.42e-11;11!UBERON:0000074;6.29e-08;7!UBERON:0001229;6.29e-08;7!UBERON:0006555;6.37e-08;15!UBERON:0004819;6.37e-08;15!UBERON:0001285;6.37e-08;15!UBERON:0007684;6.37e-08;15!UBERON:0005172;4.81e-07;52!UBERON:0005173;4.81e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003567,4.43e-25,2;UBERON:0003838,4.43e-25,2;UBERON:0003586,4.43e-25,2;UBERON:0005169,4.43e-25,2;UBERON:0002321,4.43e-25,2;UBERON:0005215,4.43e-25,2;UBERON:0002303,4.43e-25,2;UBERON:0002319,4.43e-25,2;UBERON:0000160,5.85e-25,17;UBERON:0002108,2.99e-23,4;UBERON:0005409,3.31e-17,25;UBERON:0002113,1.09e-16,26;UBERON:0003918,1.09e-16,26;UBERON:0011143,1.09e-16,26;UBERON:0005095,1.09e-16,26;UBERON:0007687,1.09e-16,26;UBERON:0000489,5.90e-14,31;UBERON:0001155,2.37e-13,9;UBERON:0003891,4.66e-13,4;UBERON:0004810,1.63e-11,10;UBERON:0000059,4.98e-11,11;UBERON:0005172,1.39e-10,54;UBERON:0005173,1.39e-10,54;UBERON:0002417,1.82e-09,60;UBERON:0000916,1.82e-09,60;UBERON:0006554,4.26e-09,47;UBERON:0001008,6.70e-09,48;UBERON:0004211,7.36e-08,15;UBERON:0009773,7.36e-08,15;UBERON:0001231,7.36e-08,15;UBERON:0001285,7.36e-08,15;UBERON:0007684,7.36e-08,15;UBERON:0004208,7.36e-08,15;UBERON:0010532,7.50e-08,7;UBERON:0000074,7.50e-08,7;UBERON:0001229,7.50e-08,7;UBERON:0001230,7.50e-08,7;UBERON:0003220,7.50e-08,7;UBERON:0005749,7.50e-08,7;UBERON:0004199,7.50e-08,7;UBERON:0004209,7.50e-08,7;UBERON:0004198,7.50e-08,7;UBERON:0006555,2.12e-07,16;UBERON:0004819,2.12e-07,16;UBERON:0005177,5.59e-07,101;UBERON:0005103,5.63e-07,8;UBERON:0000083,5.63e-07,8;UBERON:0009201,5.63e-07,8;UBERON:0006553,5.63e-07,8;UBERON:0003074,5.63e-07,8;UBERON:0003060,5.63e-07,8 | |||
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| ||
|short_description=p6@MTMR11 | |||
}} | }} |
Latest revision as of 21:02, 16 September 2015
Short description: | p6@MTMR11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_MTMR11_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 0bp_to_NM_181873, uc001etm.1, uc010pbm.1_5end |
EntrezGene: | MTMR11 |
HGNC: | 24307 |
UniProt: | A4FU01 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 4.43e-25 | 2 |
kidney interstitial cell | 4.43e-25 | 2 |
juxtaglomerular complex cell | 4.43e-25 | 2 |
renal interstitial pericyte | 4.43e-25 | 2 |
extraglomerular mesangial cell | 4.43e-25 | 2 |
pericyte cell | 4.66e-13 | 4 |
kidney cell | 8.85e-12 | 17 |
kidney epithelial cell | 8.85e-12 | 17 |
kidney tubule cell | 1.63e-11 | 10 |
nephron tubule epithelial cell | 1.63e-11 | 10 |
epithelial cell of nephron | 7.36e-08 | 15 |
glomerular cell | 7.50e-08 | 7 |
kidney corpuscule cell | 7.50e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 1.64e-07 | 2 |