FFCP PHASE1:Hg19::chr1:110693103..110693126,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:110693103..110693126,+ to FFCP PHASE1:Hg19::chr1:110693103..110693126,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=388662 | |EntrezGene=388662 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31399 | |HGNC=31399 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H1V8 | |UniProt=Q9H1V8 | ||
|association_with_transcript=0bp_to_ENST00000331565_5end | |||
|cluster_id=chr1:110693103..110693126,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_SLC6A17_5end | |||
|id=chr1:110693103..110693126,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002567;1.34e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,1.48e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.03e-17;82!UBERON:0006215;2.32e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.70e-45!57;UBERON:0005068!4.70e-45!57;UBERON:0006241!4.70e-45!57;UBERON:0007135!4.70e-45!57;UBERON:0005743!3.51e-38!86;UBERON:0000955!5.32e-38!69;UBERON:0006238!5.32e-38!69;UBERON:0001017!7.07e-38!82;UBERON:0002616!4.61e-37!59;UBERON:0002780!4.88e-37!41;UBERON:0001890!4.88e-37!41;UBERON:0006240!4.88e-37!41;UBERON:0000073!4.72e-36!94;UBERON:0001016!4.72e-36!94;UBERON:0003080!8.36e-36!42;UBERON:0003075!4.94e-34!86;UBERON:0007284!4.94e-34!86;UBERON:0002346!1.50e-31!90;UBERON:0001893!5.22e-30!34;UBERON:0002020!5.49e-30!34;UBERON:0003528!5.49e-30!34;UBERON:0002791!8.68e-29!33;UBERON:0001869!1.93e-28!32;UBERON:0003056!1.55e-25!61;UBERON:0002619!4.90e-25!22;UBERON:0001950!6.65e-23!20;UBERON:0007023!1.84e-21!115;UBERON:0000956!4.28e-21!25;UBERON:0000203!4.28e-21!25;UBERON:0000033!2.59e-20!123;UBERON:0000153!2.03e-18!129;UBERON:0007811!2.03e-18!129;UBERON:0004121!4.29e-17!169;UBERON:0000924!3.53e-16!173;UBERON:0006601!3.53e-16!173;UBERON:0000025!3.57e-15!194;UBERON:0000475!2.35e-11!365;UBERON:0000119!7.64e-11!312;UBERON:0000483!7.66e-11!309;UBERON:0002420!1.50e-10!9;UBERON:0007245!1.50e-10!9;UBERON:0010009!1.50e-10!9;UBERON:0010011!1.50e-10!9;UBERON:0000454!1.50e-10!9;UBERON:0004111!1.56e-10!241;UBERON:0002308!2.19e-10!9;UBERON:0000125!2.19e-10!9;UBERON:0003076!2.89e-10!15;UBERON:0003057!2.89e-10!15;UBERON:0000064!2.34e-09!219;UBERON:0000477!8.00e-09!286;UBERON:0000200!1.06e-08!6;UBERON:0001894!2.10e-08!7;UBERON:0006222!2.10e-08!7;UBERON:0009663!2.66e-08!7;UBERON:0001871!4.07e-08!7;UBERON:0004733!1.02e-07!12;UBERON:0002028!1.02e-07!12;UBERON:0007277!1.02e-07!12;UBERON:0002021!2.73e-07!5;UBERON:0001872!3.49e-07!5;UBERON:0002298!3.52e-07!8;UBERON:0000349!3.76e-07!5;UBERON:0004732!6.34e-07!13;UBERON:0000062!7.77e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.22e-56;22!UBERON:0001869;4.00e-55;32!UBERON:0003528;9.47e-54;34!UBERON:0002020;9.47e-54;34!UBERON:0001893;1.73e-53;34!UBERON:0001950;1.85e-51;20!UBERON:0002791;2.61e-51;32!UBERON:0002780;8.01e-50;41!UBERON:0001890;8.01e-50;41!UBERON:0000956;4.07e-49;25!UBERON:0000203;4.07e-49;25!UBERON:0000073;4.19e-49;53!UBERON:0002616;4.19e-49;53!UBERON:0000955;2.20e-35;68!UBERON:0001017;3.39e-32;75!UBERON:0001016;3.69e-24;83!UBERON:0000200;5.95e-18;6!UBERON:0004733;2.78e-17;12!UBERON:0002028;2.78e-17;12!UBERON:0002298;5.17e-16;6!UBERON:0004732;8.23e-16;13!UBERON:0001871;9.39e-15;6!UBERON:0002021;1.01e-14;5!UBERON:0002420;2.18e-14;9!UBERON:0007245;2.18e-14;9!UBERON:0010009;2.18e-14;9!UBERON:0010011;2.18e-14;9!UBERON:0000454;2.18e-14;9!UBERON:0000349;2.18e-14;5!UBERON:0001872;2.24e-14;5!UBERON:0000125;4.31e-14;9!UBERON:0002308;4.31e-14;9!UBERON:0007023;1.12e-13;114!UBERON:0000369;2.81e-11;4!UBERON:0002435;2.81e-11;4!UBERON:0000204;2.81e-11;4!UBERON:0002680;4.91e-11;9!UBERON:0001895;4.91e-11;9!UBERON:0001870;6.49e-10;3!UBERON:0001894;8.08e-10;7!UBERON:0011216;1.09e-09;132!UBERON:0009663;1.24e-09;7!UBERON:0000988;2.75e-09;3!UBERON:0005383;1.36e-08;3!UBERON:0005382;1.36e-08;3!UBERON:0001896;1.98e-08;3!UBERON:0005290;1.98e-08;3!UBERON:0002702;4.42e-07;2!UBERON:0010314;5.65e-07;132!UBERON:0001876;7.02e-07;2!UBERON:0002771;7.76e-07;2!UBERON:0003296;8.77e-07;4!UBERON:0010133;8.77e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.94e-90,56;UBERON:0005068,2.94e-90,56;UBERON:0006241,2.94e-90,56;UBERON:0007135,2.94e-90,56;UBERON:0000073,1.49e-87,53;UBERON:0002616,1.49e-87,53;UBERON:0000955,1.14e-75,68;UBERON:0006238,1.14e-75,68;UBERON:0001017,6.43e-71,81;UBERON:0002780,1.35e-70,41;UBERON:0001890,1.35e-70,41;UBERON:0003080,1.35e-70,41;UBERON:0006240,1.35e-70,41;UBERON:0001016,1.09e-62,89;UBERON:0001893,3.33e-62,34;UBERON:0003528,3.74e-62,34;UBERON:0002020,3.74e-62,34;UBERON:0001869,3.80e-62,32;UBERON:0003075,6.75e-61,82;UBERON:0007284,6.75e-61,82;UBERON:0002346,1.61e-57,86;UBERON:0002791,2.75e-57,32;UBERON:0002619,1.54e-56,22;UBERON:0001950,1.38e-51,20;UBERON:0000956,2.94e-49,25;UBERON:0000203,2.94e-49,25;UBERON:0003056,1.98e-47,61;UBERON:0010371,1.64e-45,104;UBERON:0007023,1.71e-39,114;UBERON:0010314,5.83e-37,132;UBERON:0004121,2.18e-28,171;UBERON:0000924,2.18e-28,171;UBERON:0006601,2.18e-28,171;UBERON:0011216,1.98e-24,223;UBERON:0000025,7.74e-24,192;UBERON:0003076,7.01e-20,15;UBERON:0003057,7.01e-20,15;UBERON:0000200,5.63e-18,6;UBERON:0004733,2.33e-17,12;UBERON:0002028,2.33e-17,12;UBERON:0007277,2.33e-17,12;UBERON:0004111,1.47e-16,240;UBERON:0002298,4.35e-16,6;UBERON:0004732,7.00e-16,13;UBERON:0001871,9.19e-15,6;UBERON:0002021,9.70e-15,5;UBERON:0001872,1.70e-14,5;UBERON:0002420,1.79e-14,9;UBERON:0007245,1.79e-14,9;UBERON:0010009,1.79e-14,9;UBERON:0010011,1.79e-14,9;UBERON:0000454,1.79e-14,9;UBERON:0000349,2.01e-14,5;UBERON:0000125,3.55e-14,9;UBERON:0002308,3.55e-14,9;UBERON:0000483,1.94e-12,306;UBERON:0000119,3.40e-12,309;UBERON:0000369,2.15e-11,4;UBERON:0002435,2.15e-11,4;UBERON:0000204,2.15e-11,4;UBERON:0010082,2.15e-11,4;UBERON:0002680,4.66e-11,9;UBERON:0001895,4.66e-11,9;UBERON:0010092,4.66e-11,9;UBERON:0001870,6.70e-10,3;UBERON:0001894,9.07e-10,7;UBERON:0006222,9.07e-10,7;UBERON:0009663,1.04e-09,7;UBERON:0000988,2.71e-09,3;UBERON:0005383,1.04e-08,3;UBERON:0005382,1.04e-08,3;UBERON:0001896,1.69e-08,3;UBERON:0005290,1.69e-08,3;UBERON:0010096,1.69e-08,3;UBERON:0002702,4.55e-07,2;UBERON:0001876,7.02e-07,2;UBERON:0002771,7.23e-07,2;UBERON:0003296,9.42e-07,4;UBERON:0010133,9.42e-07,4 | |||
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| ||
|short_description=p2@SLC6A17 | |||
}} | }} |
Latest revision as of 00:09, 16 September 2015
Short description: | p2@SLC6A17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC6A17_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000331565_5end |
EntrezGene: | SLC6A17 |
HGNC: | 31399 |
UniProt: | Q9H1V8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 1.48e-08 | 3 |