FFCP PHASE1:Hg19::chr17:7758374..7758390,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:7758374..7758390,+ to FFCP PHASE1:Hg19::chr17:7758374..7758390,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=92162 | |EntrezGene=92162 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32371 | |HGNC=32371 | ||
|TSSclassifier=strong | |||
|UniProt=Q6PEY1 | |UniProt=Q6PEY1 | ||
|association_with_transcript=0bp_to_ENST00000301599,NM_203411,uc002giy.2_5end | |||
|cluster_id=chr17:7758374..7758390,+ | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_1_at_TMEM88_5end | |||
|id=chr17:7758374..7758390,+ | |||
|ontology_enrichment_celltype=CL:0000115!2.13e-16!35;CL:0002078!3.23e-15!44;CL:0002139!1.96e-14!24;CL:0000071!1.41e-10!18;CL:0002546!1.41e-10!18;CL:0000213!1.17e-07!57;CL:0000215!1.17e-07!57;CL:1000449!1.41e-07!16;CL:0000222!2.62e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000115;4.35e-16;36!CL:0002139;5.83e-16;24!CL:0002078;7.52e-12;45!CL:0000071;1.19e-11;18!CL:1000449;4.29e-09;15!CL:0002681;4.72e-08;12!CL:0002584;4.72e-08;12!CL:1000497;1.75e-07;17!CL:0002518;1.75e-07;17!CL:0002543;9.18e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.54e-19,36;CL:0002078,3.50e-18,45;CL:0002139,5.58e-16,24;CL:0000071,1.10e-11,18;CL:0002546,1.10e-11,18;CL:1000449,3.32e-09,15;CL:0000213,5.36e-09,58;CL:0000215,5.36e-09,58;CL:0002681,3.93e-08,12;CL:0002584,3.93e-08,12;CL:1000497,1.41e-07,17;CL:0002518,1.41e-07,17;CL:0002543,9.21e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;1.19e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004638;1.19e-11;18!UBERON:0001986;1.19e-11;18!UBERON:0004852;1.19e-11;18!UBERON:0007023;1.64e-10;114!UBERON:0006914;1.51e-09;25!UBERON:0001638;2.56e-09;9!UBERON:0003920;2.56e-09;9!UBERON:0004582;2.56e-09;9!UBERON:0000487;2.74e-09;22!UBERON:0006555;4.29e-09;15!UBERON:0004819;4.29e-09;15!UBERON:0001285;4.29e-09;15!UBERON:0007684;4.29e-09;15!UBERON:0001893;5.29e-09;34!UBERON:0003528;5.52e-09;34!UBERON:0002020;5.52e-09;34!UBERON:0001869;6.89e-09;32!UBERON:0000353;8.91e-09;15!UBERON:0002791;9.27e-09;32!UBERON:0002780;3.25e-08;41!UBERON:0001890;3.25e-08;41!UBERON:0000956;4.33e-08;25!UBERON:0000203;4.33e-08;25!UBERON:0001225;4.72e-08;12!UBERON:0008987;4.72e-08;12!UBERON:0000073;4.78e-08;53!UBERON:0002616;4.78e-08;53!UBERON:0002465;6.06e-08;10!UBERON:0010260;1.12e-07;9!UBERON:0000922;2.39e-07;49!UBERON:0001851;3.34e-07;15!UBERON:0001473;3.35e-07;8!UBERON:0004536;3.35e-07;8!UBERON:0006558;3.35e-07;8!UBERON:0002619;3.61e-07;22!UBERON:0001032;3.64e-07;24!UBERON:0004456;3.64e-07;24!UBERON:0000489;4.62e-07;29!UBERON:0000020;8.30e-07;23 | |||
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| ||
|short_description=p1@TMEM88 | |||
}} | }} |
Latest revision as of 02:10, 18 September 2015
Short description: | p1@TMEM88 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMEM88_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | 0bp_to_ENST00000301599, NM_203411, uc002giy.2_5end |
EntrezGene: | TMEM88 |
HGNC: | 32371 |
UniProt: | Q6PEY1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.54e-19 | 36 |
meso-epithelial cell | 3.50e-18 | 45 |
endothelial cell of vascular tree | 5.58e-16 | 24 |
blood vessel endothelial cell | 1.10e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.10e-11 | 18 |
epithelial cell of nephron | 3.32e-09 | 15 |
lining cell | 5.36e-09 | 58 |
barrier cell | 5.36e-09 | 58 |
kidney cortical cell | 3.93e-08 | 12 |
renal cortical epithelial cell | 3.93e-08 | 12 |
kidney cell | 1.41e-07 | 17 |
kidney epithelial cell | 1.41e-07 | 17 |
vein endothelial cell | 9.21e-07 | 6 |