FFCP PHASE1:Hg19::chr16:24857613..24857641,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:24857613..24857641,+ to FFCP PHASE1:Hg19::chr16:24857613..24857641,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=115584 | |EntrezGene=115584 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23091 | |HGNC=23091 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000488922_5end | |||
|cluster_id=chr16:24857613..24857641,+ | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_4_at_SLC5A11_5end | |||
|id=chr16:24857613..24857641,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;6.52e-14;3!UBERON:0003057;6.52e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;1.10e-10;1!DOID:4549;1.10e-10;1!DOID:5861;1.10e-10;1!DOID:6496;1.10e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.46e-10,1;DOID:4549,1.46e-10,1;DOID:5861,1.46e-10,1;DOID:6496,1.46e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!8.68e-55!57;UBERON:0005068!8.68e-55!57;UBERON:0006241!8.68e-55!57;UBERON:0007135!8.68e-55!57;UBERON:0002616!6.21e-45!59;UBERON:0002780!5.42e-43!41;UBERON:0001890!5.42e-43!41;UBERON:0006240!5.42e-43!41;UBERON:0003080!7.23e-42!42;UBERON:0000955!5.09e-40!69;UBERON:0006238!5.09e-40!69;UBERON:0001017!1.85e-38!82;UBERON:0001893!2.35e-38!34;UBERON:0002020!2.74e-38!34;UBERON:0003528!2.74e-38!34;UBERON:0005743!2.19e-36!86;UBERON:0002791!2.42e-35!33;UBERON:0007023!4.15e-35!115;UBERON:0003075!3.31e-34!86;UBERON:0007284!3.31e-34!86;UBERON:0002346!2.13e-32!90;UBERON:0000073!2.39e-32!94;UBERON:0001016!2.39e-32!94;UBERON:0001869!5.52e-32!32;UBERON:0003056!2.16e-27!61;UBERON:0001950!2.33e-25!20;UBERON:0002619!6.18e-23!22;UBERON:0002308!9.90e-23!9;UBERON:0000125!9.90e-23!9;UBERON:0000033!1.67e-21!123;UBERON:0000153!3.32e-20!129;UBERON:0007811!3.32e-20!129;UBERON:0000956!5.34e-20!25;UBERON:0000203!5.34e-20!25;UBERON:0002298!1.77e-19!8;UBERON:0002420!1.30e-16!9;UBERON:0007245!1.30e-16!9;UBERON:0010009!1.30e-16!9;UBERON:0010011!1.30e-16!9;UBERON:0000454!1.30e-16!9;UBERON:0004121!2.03e-16!169;UBERON:0000025!4.42e-16!194;UBERON:0000924!6.99e-16!173;UBERON:0006601!6.99e-16!173;UBERON:0009663!2.64e-15!7;UBERON:0006331!5.56e-14!3;UBERON:0000988!9.75e-14!3;UBERON:0003076!1.38e-13!15;UBERON:0003057!1.38e-13!15;UBERON:0004111!1.66e-11!241;UBERON:0000200!3.73e-11!6;UBERON:0000483!2.04e-10!309;UBERON:0000119!3.07e-10!312;UBERON:0001875!5.09e-10!2;UBERON:0006514!5.09e-10!2;UBERON:0001897!5.81e-10!2;UBERON:0002148!1.02e-09!2;UBERON:0009662!1.02e-09!2;UBERON:0000477!2.50e-09!286;UBERON:0000064!2.75e-09!219;UBERON:0004733!5.77e-09!12;UBERON:0002028!5.77e-09!12;UBERON:0007277!5.77e-09!12;UBERON:0000062!2.42e-08!511;UBERON:0001871!2.82e-08!7;UBERON:0004732!3.00e-08!13;UBERON:0002021!5.79e-08!5;UBERON:0001872!6.08e-08!5;UBERON:0000475!1.22e-07!365;UBERON:0002240!5.64e-07!3;UBERON:0000481!5.97e-07!347;UBERON:0001896!6.91e-07!3;UBERON:0005290!6.91e-07!3;UBERON:0010096!6.91e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;1.32e-38;6!UBERON:0000988;1.63e-28;3!UBERON:0000125;3.59e-26;9!UBERON:0002308;3.59e-26;9!UBERON:0001875;5.39e-20;2!UBERON:0006514;5.39e-20;2!UBERON:0001897;1.28e-19;2!UBERON:0002148;1.28e-19;2!UBERON:0006331;1.28e-19;2!UBERON:0009662;1.28e-19;2!UBERON:0010225;1.28e-19;2!UBERON:0004733;2.53e-19;12!UBERON:0002028;2.53e-19;12!UBERON:0004732;7.79e-18;13!UBERON:0002240;6.52e-14;3!UBERON:0005174;6.52e-14;3!UBERON:0001137;6.52e-14;3!UBERON:0001896;2.06e-13;3!UBERON:0005290;2.06e-13;3!UBERON:0000073;5.44e-13;53!UBERON:0002616;5.44e-13;53!UBERON:0009663;6.60e-13;7!UBERON:0002336;4.57e-11;1!UBERON:0002038;4.57e-11;1!UBERON:0011215;4.57e-11;1!UBERON:0001018;4.57e-11;1!UBERON:0009661;4.57e-11;1!UBERON:0002950;4.57e-11;1!UBERON:0002473;4.57e-11;1!UBERON:0005340;4.57e-11;1!UBERON:0003544;4.57e-11;1!UBERON:0005970;4.57e-11;1!UBERON:0002316;4.57e-11;1!UBERON:0001020;4.57e-11;1!UBERON:0001891;4.57e-11;1!UBERON:0002437;4.57e-11;1!UBERON:0002784;2.72e-10;4!UBERON:0002420;3.69e-10;9!UBERON:0007245;3.69e-10;9!UBERON:0010009;3.69e-10;9!UBERON:0010011;3.69e-10;9!UBERON:0000454;3.69e-10;9!UBERON:0002680;6.46e-10;9!UBERON:0001895;6.46e-10;9!UBERON:0000160;7.43e-09;17!UBERON:0002108;1.18e-08;4!UBERON:0001016;1.03e-07;83!UBERON:0001017;5.18e-07;75!UBERON:0005409;5.86e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002298,1.55e-38,6;UBERON:0003076,7.09e-30,15;UBERON:0003057,7.09e-30,15;UBERON:0000988,3.48e-28,3;UBERON:0000125,4.21e-26,9;UBERON:0002308,4.21e-26,9;UBERON:0001049,5.94e-26,56;UBERON:0005068,5.94e-26,56;UBERON:0006241,5.94e-26,56;UBERON:0007135,5.94e-26,56;UBERON:0001875,4.90e-20,2;UBERON:0006514,4.90e-20,2;UBERON:0001897,6.54e-20,2;UBERON:0010225,6.54e-20,2;UBERON:0000073,1.80e-19,53;UBERON:0002616,1.80e-19,53;UBERON:0002148,2.26e-19,2;UBERON:0006331,2.26e-19,2;UBERON:0009662,2.26e-19,2;UBERON:0004733,2.74e-19,12;UBERON:0002028,2.74e-19,12;UBERON:0007277,2.74e-19,12;UBERON:0004732,8.37e-18,13;UBERON:0001017,3.43e-17,81;UBERON:0003075,3.43e-17,82;UBERON:0007284,3.43e-17,82;UBERON:0007023,2.14e-16,114;UBERON:0002346,2.63e-16,86;UBERON:0001016,2.62e-15,89;UBERON:0000955,1.21e-14,68;UBERON:0006238,1.21e-14,68;UBERON:0002240,9.00e-14,3;UBERON:0005174,9.00e-14,3;UBERON:0001137,9.00e-14,3;UBERON:0001896,1.41e-13,3;UBERON:0005290,1.41e-13,3;UBERON:0010096,1.41e-13,3;UBERON:0010371,3.71e-13,104;UBERON:0009663,5.85e-13,7;UBERON:0002336,3.41e-11,1;UBERON:0011215,3.41e-11,1;UBERON:0001018,3.41e-11,1;UBERON:0002473,3.41e-11,1;UBERON:0005340,3.41e-11,1;UBERON:0003544,3.41e-11,1;UBERON:0005970,3.41e-11,1;UBERON:0002316,3.41e-11,1;UBERON:0001020,3.41e-11,1;UBERON:0002437,3.41e-11,1;UBERON:0002038,3.76e-11,1;UBERON:0009661,3.76e-11,1;UBERON:0002950,3.76e-11,1;UBERON:0001891,3.76e-11,1;UBERON:0009616,3.76e-11,1;UBERON:0010286,3.76e-11,1;UBERON:0011216,8.29e-11,223;UBERON:0002784,1.95e-10,4;UBERON:0002420,3.36e-10,9;UBERON:0007245,3.36e-10,9;UBERON:0010009,3.36e-10,9;UBERON:0010011,3.36e-10,9;UBERON:0000454,3.36e-10,9;UBERON:0010314,6.03e-10,132;UBERON:0002680,8.27e-10,9;UBERON:0001895,8.27e-10,9;UBERON:0010092,8.27e-10,9;UBERON:0000160,8.07e-09,17;UBERON:0002108,1.37e-08,4;UBERON:0002780,8.40e-08,41;UBERON:0001890,8.40e-08,41;UBERON:0003080,8.40e-08,41;UBERON:0006240,8.40e-08,41;UBERON:0000025,2.45e-07,192;UBERON:0004121,4.18e-07,171;UBERON:0000924,4.18e-07,171;UBERON:0006601,4.18e-07,171 | |||
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|short_description=p4@SLC5A11 | |||
}} | }} |
Latest revision as of 19:04, 15 September 2015
Short description: | p4@SLC5A11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLC5A11_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 0bp_to_ENST00000488922_5end |
EntrezGene: | SLC5A11 |
HGNC: | 23091 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.46e-10 | 1 |
extraosseous chondrosarcoma | 1.46e-10 | 1 |
myxoid chondrosarcoma | 1.46e-10 | 1 |
extraskeletal myxoid chondrosarcoma | 1.46e-10 | 1 |